F341859

General Info

Members Datasets Scaffolds Average Seq Length
229 165 458 410

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10000375|Ga0081455_100003753
Length 488
Sequence LTVGPDEVATAAFRDERVAVLATLIRHVGDFQLAEDAVQDAFAAAVGAWRRDGVPDNPAAWITVAARRRAIDLVRRGRAQADRAERLAELIRMDGDTHPAEPAAVPDDRLRLIFTACHPALDLPARVALTLRVVGGLTTAEIARAFLVAEPTMGKRIVRAKKKIAAAGIPYRVPSEADLPARLRGVLRVVYLIFNEGYLGSAGDRLVRAELCAEAVRLGRLLADVLPAEPEVWGLLALMLLHDARRASRVDGSGAWVGLPGQDTARWDGDSLAAGLSALDRGLRLGPAGEYLLQAAITALQMRGADTGETDWPAIAHLYARLAALTRSPVVAVNHAAAVGFTSGPEAGLSALTPLLDDPALASYQPLHATHADLLRRTGATGAARAAYGRAIELSTNPVERAELERRLATQLHIPGQLQREDLLRGLRAAGWTDERVRELAGFMQHVDHLQNASVGTDSRVSGRQFSELVAVGRRILGELEAAAGTYS

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
42 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
66 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
67 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
68 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
164 2558860280 Kutzneria sp. 744 Isolate Unclassified
165 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 3.93
Rhizosphere 89.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10000375 3300005937 Bacteria 59255
2 Ga0070683_100126360 3300005329 Bacteria 2418
3 Ga0070666_10009509 3300005335 Bacteria 6062
4 Ga0070666_10105002 3300005335 Bacteria 1951
5 Ga0070680_100001429 3300005336 Bacteria 17279
6 Ga0070660_100047404 3300005339 Bacteria 3297
7 Ga0070661_100005176 3300005344 Bacteria 8980
8 Ga0070668_100007226 3300005347 Bacteria 8235
9 Ga0070667_100004896 3300005367 Bacteria 11215
10 Ga0070667_100050589 3300005367 Bacteria 3503
11 Ga0070709_10052328 3300005434 Bacteria 2566
12 Ga0070714_100013098 3300005435 Bacteria 6638
13 Ga0070714_100098230 3300005435 Bacteria 2575
14 Ga0070714_100211235 3300005435 Bacteria 1779
15 Ga0070713_100013199 3300005436 Bacteria 6090
16 Ga0070710_10077052 3300005437 Bacteria 1937
17 Ga0070698_100108055 3300005471 Bacteria 2749
18 Ga0070679_100084016 3300005530 Bacteria 3172
19 Ga0070684_100097582 3300005535 Bacteria 2621
20 Ga0068853_100035180 3300005539 Bacteria 4254
21 Ga0070665_100130641 3300005548 Bacteria 2514
22 Ga0070665_100284285 3300005548 Bacteria 1656
23 Ga0070664_100214514 3300005564 Bacteria 1720
24 Ga0068857_100238647 3300005577 Bacteria 1664
25 Ga0068858_100017070 3300005842 Bacteria 6814
26 Ga0068860_100006729 3300005843 Bacteria 11532
27 Ga0068862_100016364 3300005844 Bacteria 6172
28 Ga0081455_10078775 3300005937 Bacteria 2707
29 Ga0081538_10000496 3300005981 Bacteria 43978
30 Ga0081538_10000509 3300005981 Bacteria 43516
31 Ga0081538_10013807 3300005981 Bacteria 6374
32 Ga0081538_10049059 3300005981 Bacteria 2565
33 Ga0081540_1011815 3300005983 Bacteria 5803
34 Ga0081539_10008097 3300005985 Bacteria 9293
35 Ga0070717_10009652 3300006028 Bacteria 7264
36 Ga0070712_100022023 3300006175 Bacteria 4193
37 Ga0070712_100026525 3300006175 Bacteria 3861
38 Ga0075428_100010563 3300006844 Bacteria 10263
39 Ga0075431_100152023 3300006847 Bacteria 2383
40 Ga0075434_100173064 3300006871 Bacteria 2179
41 Ga0075429_100064124 3300006880 Bacteria 3200
42 Ga0105240_10059123 3300009093 Bacteria 4785
43 Ga0111539_10020931 3300009094 Bacteria 8054
44 Ga0105245_10114458 3300009098 Bacteria 2512
45 Ga0114129_10294493 3300009147 Bacteria 2165
46 Ga0105242_10141191 3300009176 Bacteria 2090
47 Ga0105238_10008026 3300009551 Bacteria 10560
48 Ga0157372_10059093 3300013307 Bacteria 4288
49 Ga0157379_10061028 3300014968 Bacteria 3371
50 Ga0157376_10017841 3300014969 Bacteria 5425
51 Ga0213873_10000419 3300021358 Bacteria 6895
52 Ga0213874_10000291 3300021377 Bacteria 9853
53 Ga0207426_1006327 3300025302 Bacteria 5173
54 Ga0207680_10008091 3300025903 Bacteria 5153
55 Ga0207680_10008455 3300025903 Bacteria 5054
56 Ga0207707_10063923 3300025912 Bacteria 3203
57 Ga0207671_10066508 3300025914 Bacteria 2683
58 Ga0207693_10014530 3300025915 Bacteria 6327
59 Ga0207693_10061668 3300025915 Bacteria 2937
60 Ga0207663_10088551 3300025916 Bacteria 2047
61 Ga0207663_10169972 3300025916 Bacteria 1547
62 Ga0207657_10028474 3300025919 Bacteria 5096
63 Ga0207649_10095439 3300025920 Bacteria 1957
64 Ga0207664_10013955 3300025929 Bacteria 5791
65 Ga0207664_10086275 3300025929 Bacteria 2564
66 Ga0207665_10087849 3300025939 Bacteria 2150
67 Ga0207665_10098732 3300025939 Bacteria 2035
68 Ga0207679_10130924 3300025945 Bacteria 2012
69 Ga0207712_10045435 3300025961 Bacteria 3041
70 Ga0207668_10032655 3300025972 Bacteria 3442
71 Ga0207658_10005125 3300025986 Bacteria 9023
72 Ga0207658_10054765 3300025986 Bacteria 2952
73 Ga0207674_10303000 3300026116 Bacteria 1547
74 Ga0207698_10072518 3300026142 Bacteria 2738
75 Ga0207698_10220235 3300026142 Bacteria 1714
76 Ga0207698_10277212 3300026142 Bacteria 1549
77 Ga0268266_10007159 3300028379 Bacteria 10108
78 Ga0268266_10042867 3300028379 Bacteria 3866
79 Ga0268266_10089462 3300028379 Bacteria 2696
80 Ga0268265_10004753 3300028380 Bacteria 9362
81 Ga0268264_10008799 3300028381 Bacteria 8375
82 Ga0307513_10000107 3300031456 Bacteria 116685
83 Ga0307409_100155444 3300031995 Bacteria 1992
84 Ga0307415_100026027 3300032126 Bacteria 3683
85 Ga0373926_0035791 3300035083 Bacteria 1762
86 Ga0373944_0001023 3300035089 Bacteria 6922
87 Ga0373954_0035433 3300035118 Bacteria 2315
88 Ga0373956_0007722 3300035119 Bacteria 4337
89 Ga0373943_0003444 3300035170 Bacteria 7200
90 Ga0373935_0048310 3300035692 Bacteria 2694
91 Ga0373927_0019421 3300035695 Bacteria 4457
92 Ga0373933_0055023 3300035724 Bacteria 2386
93 Ga0373937_0022400 3300036401 Bacteria 5680
94 Ga0373925_0032339 3300037068 Bacteria 3850
95 Ga0395900_0093403 3300037418 Bacteria 3090
96 Ga0395900_0142555 3300037418 Bacteria 2453
97 Ga0395898_0011461 3300037466 Bacteria 9207
98 Ga0395898_0027996 3300037466 Bacteria 5651
99 Ga0395898_0040875 3300037466 Bacteria 4583
100 Ga0395905_0009779 3300037471 Bacteria 9348
101 Ga0395905_0166762 3300037471 Bacteria 2070
102 Ga0436364_0058904 3300037853 Bacteria 2819
103 Ga0436364_0269027 3300037853 Bacteria 1555
104 Ga0436364_1397849 3300037853 Bacteria 6369
105 Ga0395901_0011416 3300038443 Bacteria 8999
106 Ga0395901_0024727 3300038443 Bacteria 6166
107 Ga0395901_0031268 3300038443 Bacteria 5488
108 Ga0395901_0266175 3300038443 Bacteria 1783
109 Ga0436365_0622858 3300039437 Bacteria 15110
110 Ga0436365_0976621 3300039437 Bacteria 10988
111 Ga0436363_1182796 3300039450 Bacteria 9738
112 Ga0466969_0017487 3300044656 Bacteria 3742
113 Ga0466969_0098075 3300044656 Bacteria 1382
114 Ga0466966_0040830 3300044684 Bacteria 2984
115 Ga0466961_0043715 3300044693 Bacteria 2868
116 Ga0466964_0090676 3300044706 Bacteria 1330
117 Ga0466970_0007944 3300044765 Bacteria 5327
118 Ga0466970_0020364 3300044765 Bacteria 3446
119 Ga0466957_0085352 3300044842 Bacteria 1972
120 Ga0466960_0031682 3300044901 Bacteria 2442
121 Ga0466967_0009930 3300045976 Bacteria 7105
122 Ga0495641_0065331 3300046461 Bacteria 1637
123 Ga0495651_0062012 3300046462 Bacteria 2861
124 Ga0495582_0013284 3300046473 Bacteria 4533
125 Ga0495639_0000955 3300046475 Bacteria 13034
126 Ga0495662_0024877 3300046476 Bacteria 2890
127 Ga0495664_0132274 3300046477 Bacteria 1511
128 Ga0495594_0007961 3300046499 Bacteria 5448
129 Ga0495618_0021945 3300046514 Bacteria 3939
130 Ga0495628_0193032 3300046516 Bacteria 1537
131 Ga0495630_0116127 3300046517 Bacteria 2028
132 Ga0495640_0058651 3300046533 Bacteria 2624
133 Ga0495634_0052390 3300046642 Bacteria 2735
134 Ga0495635_0033071 3300046663 Bacteria 3588
135 Ga0495588_0008942 3300046674 Bacteria 4611
136 Ga0495623_0111802 3300046679 Bacteria 1655
137 Ga0495646_0065401 3300046680 Bacteria 2153
138 Ga0495647_0002499 3300046681 Bacteria 5825
139 Ga0495658_0067635 3300046683 Bacteria 2066
140 Ga0495624_0039924 3300046690 Bacteria 3008
141 Ga0495604_0070547 3300047317 Bacteria 2645
142 Ga0495674_0008047 3300047319 Bacteria 10063
143 Ga0495674_0052240 3300047319 Bacteria 3598
144 Ga0495676_0003675 3300047321 Bacteria 13924
145 Ga0495680_0036318 3300047322 Bacteria 3957
146 Ga0495684_0011176 3300047471 Bacteria 6937
147 Ga0495593_0022228 3300047673 Bacteria 3537
148 Ga0496104_0090657 3300048907 Bacteria 2921
149 Ga0496105_0010420 3300048908 Bacteria 7312
150 Ga0496107_0043050 3300048910 Bacteria 3244
151 Ga0496109_0226611 3300048912 Bacteria 1758
152 Ga0496110_0078699 3300048913 Bacteria 2935
153 Ga0496112_0034948 3300048915 Bacteria 4891
154 Ga0496112_0128002 3300048915 Bacteria 2510
155 Ga0496112_0377934 3300048915 Bacteria 1358
156 Ga0496113_0025046 3300048916 Bacteria 4248
157 Ga0496119_0008966 3300048922 Bacteria 8685
158 Ga0496121_0015892 3300048924 Bacteria 7821
159 Ga0496124_0102082 3300048927 Bacteria 2322
160 Ga0496126_0074201 3300048929 Bacteria 3022
161 Ga0501031_0001051 3300049568 Bacteria 16740
162 Ga0501032_0004183 3300049569 Bacteria 10932
163 Ga0501033_0000704 3300049570 Bacteria 30846
164 Ga0501034_0005933 3300049571 Bacteria 13243
165 Ga0501034_0037227 3300049571 Bacteria 4926
166 Ga0501036_0004410 3300049572 Bacteria 11359
167 Ga0501036_0148215 3300049572 Bacteria 1979
168 Ga0501036_0148593 3300049572 Bacteria 1976
169 Ga0501036_0182887 3300049572 Bacteria 1764
170 Ga0501037_0001546 3300049573 Bacteria 16794
171 Ga0501038_0000825 3300049574 Bacteria 27591
172 Ga0501039_0013323 3300049575 Bacteria 6286
173 Ga0501039_0043423 3300049575 Bacteria 3472
174 Ga0501039_0044436 3300049575 Bacteria 3431
175 Ga0501039_0068496 3300049575 Bacteria 2755
176 Ga0501040_0038685 3300049576 Bacteria 3243
177 Ga0501040_0063368 3300049576 Bacteria 2544
178 Ga0501040_0081153 3300049576 Bacteria 2247
179 Ga0501040_0091221 3300049576 Bacteria 2118
180 Ga0501042_0034916 3300049578 Bacteria 3567
181 Ga0501042_0104852 3300049578 Bacteria 2034
182 Ga0501043_0002187 3300049579 Bacteria 16683
183 Ga0501046_0000798 3300049580 Bacteria 30547
184 Ga0501046_0145738 3300049580 Bacteria 1789
185 Ga0501047_0000879 3300049581 Bacteria 30673
186 Ga0501047_0032078 3300049581 Bacteria 5070
187 Ga0501047_0074173 3300049581 Bacteria 3275
188 Ga0501047_0074372 3300049581 Bacteria 3271
189 Ga0501048_0001204 3300049582 Bacteria 19581
190 Ga0501048_0031428 3300049582 Bacteria 3840
191 Ga0501048_0068821 3300049582 Bacteria 2500
192 Ga0501048_0082057 3300049582 Bacteria 2274
193 Ga0501069_0017741 3300049585 Bacteria 3836
194 Ga0501070_0000703 3300049586 Bacteria 30732
195 Ga0501071_0092990 3300049587 Bacteria 2217
196 Ga0501071_0142314 3300049587 Bacteria 1786
197 Ga0501072_0032868 3300049588 Bacteria 4064
198 Ga0501073_0003233 3300049589 Bacteria 12229
199 Ga0501073_0103763 3300049589 Bacteria 1974
200 Ga0501074_0011132 3300049590 Bacteria 6534
201 Ga0501074_0049346 3300049590 Bacteria 3039
202 Ga0501075_0090648 3300049591 Bacteria 2319
203 Ga0501076_0074763 3300049592 Bacteria 2715
204 Ga0501076_0129533 3300049592 Bacteria 2046
205 Ga0501077_0050427 3300049593 Bacteria 2646
206 Ga0501079_0026965 3300049741 Bacteria 4405
207 Ga0501079_0086559 3300049741 Bacteria 2425
208 Ga0501080_0030357 3300049742 Bacteria 5035
209 Ga0501081_0026600 3300049743 Bacteria 3902
210 Ga0501081_0032244 3300049743 Bacteria 3554
211 Ga0501083_0002212 3300049744 Bacteria 13292
212 Ga0501035_0001052 3300049822 Bacteria 28914
213 Ga0501044_0000735 3300049823 Bacteria 39493
214 Ga0501045_0010432 3300049824 Bacteria 6505
215 Ga0501045_0028284 3300049824 Bacteria 4043
216 Ga0501045_0067616 3300049824 Bacteria 2624
217 nmdc:mga09592_70472_c1 3300050508 Bacteria 2966
218 nmdc:mga06r32_118600_c1 3300050510 Bacteria 2609
219 nmdc:mga08y16_18315_c1 3300050511 Bacteria 7378
220 nmdc:mga0n895_355872_c1 3300050512 Bacteria 1483
221 Ga0495601_0046708 3300053077 Bacteria 2725
222 Ga0501084_0204481 3300054114 Bacteria 1666
223 Ga0501084_0252718 3300054114 Bacteria 1488
224 Ga0501082_0064181 3300060353 Bacteria 3163
225 Ga0501082_0067931 3300060353 Bacteria 3070
226 Ga0530510_0028497 3300061734 Bacteria 4005
227 Ga0530510_0140148 3300061734 Bacteria 1781
228 2559426445 2558860280 Bacteria 11429938
229 2954706291 2954701450 Bacteria 10834262
230 Ga0081455_10000375
231 Ga0070683_100126360
232 Ga0070666_10009509
233 Ga0070666_10105002
234 Ga0070680_100001429
235 Ga0070660_100047404
236 Ga0070661_100005176
237 Ga0070668_100007226
238 Ga0070667_100004896
239 Ga0070667_100050589
240 Ga0070709_10052328
241 Ga0070714_100013098
242 Ga0070714_100098230
243 Ga0070714_100211235
244 Ga0070713_100013199
245 Ga0070710_10077052
246 Ga0070698_100108055
247 Ga0070679_100084016
248 Ga0070684_100097582
249 Ga0068853_100035180
250 Ga0070665_100130641
251 Ga0070665_100284285
252 Ga0070664_100214514
253 Ga0068857_100238647
254 Ga0068858_100017070
255 Ga0068860_100006729
256 Ga0068862_100016364
257 Ga0081455_10078775
258 Ga0081538_10000496
259 Ga0081538_10000509
260 Ga0081538_10013807
261 Ga0081538_10049059
262 Ga0081540_1011815
263 Ga0081539_10008097
264 Ga0070717_10009652
265 Ga0070712_100022023
266 Ga0070712_100026525
267 Ga0075428_100010563
268 Ga0075431_100152023
269 Ga0075434_100173064
270 Ga0075429_100064124
271 Ga0105240_10059123
272 Ga0111539_10020931
273 Ga0105245_10114458
274 Ga0114129_10294493
275 Ga0105242_10141191
276 Ga0105238_10008026
277 Ga0157372_10059093
278 Ga0157379_10061028
279 Ga0157376_10017841
280 Ga0213873_10000419
281 Ga0213874_10000291
282 Ga0207426_1006327
283 Ga0207680_10008091
284 Ga0207680_10008455
285 Ga0207707_10063923
286 Ga0207671_10066508
287 Ga0207693_10014530
288 Ga0207693_10061668
289 Ga0207663_10088551
290 Ga0207663_10169972
291 Ga0207657_10028474
292 Ga0207649_10095439
293 Ga0207664_10013955
294 Ga0207664_10086275
295 Ga0207665_10087849
296 Ga0207665_10098732
297 Ga0207679_10130924
298 Ga0207712_10045435
299 Ga0207668_10032655
300 Ga0207658_10005125
301 Ga0207658_10054765
302 Ga0207674_10303000
303 Ga0207698_10072518
304 Ga0207698_10220235
305 Ga0207698_10277212
306 Ga0268266_10007159
307 Ga0268266_10042867
308 Ga0268266_10089462
309 Ga0268265_10004753
310 Ga0268264_10008799
311 Ga0307513_10000107
312 Ga0307409_100155444
313 Ga0307415_100026027
314 Ga0373926_0035791
315 Ga0373944_0001023
316 Ga0373954_0035433
317 Ga0373956_0007722
318 Ga0373943_0003444
319 Ga0373935_0048310
320 Ga0373927_0019421
321 Ga0373933_0055023
322 Ga0373937_0022400
323 Ga0373925_0032339
324 Ga0395900_0093403
325 Ga0395900_0142555
326 Ga0395898_0011461
327 Ga0395898_0027996
328 Ga0395898_0040875
329 Ga0395905_0009779
330 Ga0395905_0166762
331 Ga0436364_0058904
332 Ga0436364_0269027
333 Ga0436364_1397849
334 Ga0395901_0011416
335 Ga0395901_0024727
336 Ga0395901_0031268
337 Ga0395901_0266175
338 Ga0436365_0622858
339 Ga0436365_0976621
340 Ga0436363_1182796
341 Ga0466969_0017487
342 Ga0466969_0098075
343 Ga0466966_0040830
344 Ga0466961_0043715
345 Ga0466964_0090676
346 Ga0466970_0007944
347 Ga0466970_0020364
348 Ga0466957_0085352
349 Ga0466960_0031682
350 Ga0466967_0009930
351 Ga0495641_0065331
352 Ga0495651_0062012
353 Ga0495582_0013284
354 Ga0495639_0000955
355 Ga0495662_0024877
356 Ga0495664_0132274
357 Ga0495594_0007961
358 Ga0495618_0021945
359 Ga0495628_0193032
360 Ga0495630_0116127
361 Ga0495640_0058651
362 Ga0495634_0052390
363 Ga0495635_0033071
364 Ga0495588_0008942
365 Ga0495623_0111802
366 Ga0495646_0065401
367 Ga0495647_0002499
368 Ga0495658_0067635
369 Ga0495624_0039924
370 Ga0495604_0070547
371 Ga0495674_0008047
372 Ga0495674_0052240
373 Ga0495676_0003675
374 Ga0495680_0036318
375 Ga0495684_0011176
376 Ga0495593_0022228
377 Ga0496104_0090657
378 Ga0496105_0010420
379 Ga0496107_0043050
380 Ga0496109_0226611
381 Ga0496110_0078699
382 Ga0496112_0034948
383 Ga0496112_0128002
384 Ga0496112_0377934
385 Ga0496113_0025046
386 Ga0496119_0008966
387 Ga0496121_0015892
388 Ga0496124_0102082
389 Ga0496126_0074201
390 Ga0501031_0001051
391 Ga0501032_0004183
392 Ga0501033_0000704
393 Ga0501034_0005933
394 Ga0501034_0037227
395 Ga0501036_0004410
396 Ga0501036_0148215
397 Ga0501036_0148593
398 Ga0501036_0182887
399 Ga0501037_0001546
400 Ga0501038_0000825
401 Ga0501039_0013323
402 Ga0501039_0043423
403 Ga0501039_0044436
404 Ga0501039_0068496
405 Ga0501040_0038685
406 Ga0501040_0063368
407 Ga0501040_0081153
408 Ga0501040_0091221
409 Ga0501042_0034916
410 Ga0501042_0104852
411 Ga0501043_0002187
412 Ga0501046_0000798
413 Ga0501046_0145738
414 Ga0501047_0000879
415 Ga0501047_0032078
416 Ga0501047_0074173
417 Ga0501047_0074372
418 Ga0501048_0001204
419 Ga0501048_0031428
420 Ga0501048_0068821
421 Ga0501048_0082057
422 Ga0501069_0017741
423 Ga0501070_0000703
424 Ga0501071_0092990
425 Ga0501071_0142314
426 Ga0501072_0032868
427 Ga0501073_0003233
428 Ga0501073_0103763
429 Ga0501074_0011132
430 Ga0501074_0049346
431 Ga0501075_0090648
432 Ga0501076_0074763
433 Ga0501076_0129533
434 Ga0501077_0050427
435 Ga0501079_0026965
436 Ga0501079_0086559
437 Ga0501080_0030357
438 Ga0501081_0026600
439 Ga0501081_0032244
440 Ga0501083_0002212
441 Ga0501035_0001052
442 Ga0501044_0000735
443 Ga0501045_0010432
444 Ga0501045_0028284
445 Ga0501045_0067616
446 nmdc:mga09592_70472_c1
447 nmdc:mga06r32_118600_c1
448 nmdc:mga08y16_18315_c1
449 nmdc:mga0n895_355872_c1
450 Ga0495601_0046708
451 Ga0501084_0204481
452 Ga0501084_0252718
453 Ga0501082_0064181
454 Ga0501082_0067931
455 Ga0530510_0028497
456 Ga0530510_0140148
457 2559426445
458 2954706291

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

182

283

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

111

164

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

12

80

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h27-assembly2.cif.gz_D crystal structure of escherichia coli sigmae region 4 bound to its-35 element dna 0.8073 108 167
5fgm-assembly1.cif.gz_A streptomyces coelicolor sigr region 4 0.7193 107 168
3hug-assembly2.cif.gz_E crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.706 110 169
3hug-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.7005 110 170
2h27-assembly2.cif.gz_D crystal structure of escherichia coli sigmae region 4 bound to its-35 element dna 0.7005 108 167
ID Description Score Start End Superfamily
3vdoA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8515 110 168 1.10.10.10
af_Q4DCN5_471_540_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8333 208 285 1.25.40.10
1or7B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8184 108 167 1.10.10.10
2h27D00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8073 108 167 1.10.10.10
1or7A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7896 108 170 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2S9FT98-F1-model_v4 RNA polymerase subunit sigma-24 0.9894 186 273
AF-A0A6B3HRZ0-F1-model_v4 RNA polymerase sigma factor 0.972 201 318
AF-A0A6B3HZK1-F1-model_v4 RNA polymerase subunit sigma-24 0.9714 229 351
AF-A0A3A0A4U3-F1-model_v4 RNA polymerase subunit sigma-24 0.97 229 350
AF-A0A7W1M2D5-F1-model_v4 DUF6596 domain-containing protein 0.9686 226 348

Map