F341730

General Info

Members Datasets Scaffolds Average Seq Length
229 176 207 262

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_100029645|Ga0070674_1000296452
Length 285
Sequence MPRFAANLSMMYTEVPFLDRFEAAARDGFKGVEFLFPYAWPAREIAARLEGNGLEQALFNAPPGGDTPPSILAALEDPSVRGTASVPGKEAEFRAGMQYALDYAAALKCPRVHFMAGLVAQDASRERHRAVYVENLRWAAEQGAKAGIDVLIEPINTRDVPRFYLNRQDEAHAIVQEVGLPNLKVQMDLYHCQIVEGDVATKIRQYLPTGRVGHFQIAGVPERHEPDIGEMNFPYLFDVIDAVSGECGWRGWIGCEYRPKRGGEPGGTSAGLGWWRGVAAPPSRP

Samples

Sample ID Description Type Environment
1 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
2 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
3 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
4 2534681786 Brucella suis 92/29 Isolate Unclassified
5 2643221596 Acidovorax sp. Root70 Isolate Unclassified
6 2643221652 Acidovorax sp. Root402 Isolate Unclassified
7 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
8 2738541300 Massilia sp. GV016 Isolate Unclassified
9 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
10 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
11 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
12 2842711865 Duganella sp. R-73148 Isolate Unclassified
13 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
14 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
15 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
16 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
17 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
18 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
19 2904424332 Duganella sp. 1411 Isolate Rhizosphere
20 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
21 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
22 2941479691
23 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
24 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
27 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
28 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
36 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
74 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
75 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
111 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
112 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
113 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
171 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
172 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.39
Metatranscriptomes 0
Isolates 9.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.3
Nodule 2.18
Rhizoplane 1.75
Rhizosphere 72.05
Stem 0
Stem Tuber 0
Unclassified 15.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000685 3300002738 Bacteria 15605
2 rootH2_10120352 3300003320 Bacteria 3803
3 Ga0055526_1000001 3300003771 Bacteria 669703
4 Ga0055531_10004665 3300003794 Bacteria 8215
5 Ga0055543_1001942 3300004625 Bacteria 7385
6 Ga0065712_10228636 3300005290 Bacteria 1018
7 Ga0070658_10077269 3300005327 Bacteria 2731
8 Ga0070660_100064024 3300005339 Bacteria 2860
9 Ga0070669_100033544 3300005353 Bacteria 3714
10 Ga0070674_100029645 3300005356 Bacteria 3608
11 Ga0070674_100041083 3300005356 Bacteria 3132
12 Ga0070673_100014397 3300005364 Bacteria 5507
13 Ga0070667_100058791 3300005367 Bacteria 3251
14 Ga0070663_100017763 3300005455 Bacteria 4650
15 Ga0070662_100245444 3300005457 Bacteria 1437
16 Ga0070707_100613182 3300005468 Bacteria 1051
17 Ga0070672_100009399 3300005543 Bacteria 6739
18 Ga0070672_100469239 3300005543 Bacteria 1086
19 Ga0070665_100116235 3300005548 Bacteria 2678
20 Ga0068855_100521702 3300005563 Bacteria 1289
21 Ga0068857_100338382 3300005577 Bacteria 1392
22 Ga0068861_100413289 3300005719 Bacteria 1200
23 Ga0068861_100452120 3300005719 Bacteria 1151
24 Ga0068858_100009761 3300005842 Bacteria 9139
25 Ga0068860_100016607 3300005843 Bacteria 7179
26 Ga0075364_10010722 3300006051 Bacteria 5543
27 Ga0070712_100022623 3300006175 Bacteria 4143
28 Ga0075366_10124570 3300006195 Bacteria 1554
29 Ga0099794_10040196 3300007265 Bacteria 2223
30 Ga0157378_10448238 3300013297 Bacteria 1280
31 Ga0157375_10000023 3300013308 Bacteria 235137
32 Ga0157379_10184134 3300014968 Bacteria 1887
33 Ga0209646_1000054 3300025246 Bacteria 279447
34 Ga0209673_1052263 3300025273 Bacteria 1073
35 Ga0209564_1000002 3300025295 Bacteria 1636803
36 Ga0209051_1002875 3300025303 Bacteria 11852
37 Ga0209257_1000015 3300025304 Bacteria 908141
38 Ga0207690_10456707 3300025932 Bacteria 1028
39 Ga0207706_10347067 3300025933 Bacteria 1291
40 Ga0207669_10052697 3300025937 Bacteria 2446
41 Ga0207669_10076201 3300025937 Bacteria 2128
42 Ga0207691_10029143 3300025940 Bacteria 5164
43 Ga0207661_10000217 3300025944 Bacteria 37415
44 Ga0207667_10122118 3300025949 Bacteria 2684
45 Ga0207668_10459606 3300025972 Bacteria 1088
46 Ga0207658_10188162 3300025986 Bacteria 1714
47 Ga0207703_10171541 3300026035 Bacteria 1908
48 Ga0207678_10036423 3300026067 Bacteria 4283
49 Ga0207648_10207479 3300026089 Bacteria 1739
50 Ga0207648_10293332 3300026089 Bacteria 1457
51 Ga0207683_10302696 3300026121 Bacteria 1463
52 Ga0268264_10005440 3300028381 Bacteria 10789
53 Ga0307515_10000103 3300028794 Bacteria 198308
54 Ga0307515_10000184 3300028794 Bacteria 153952
55 Ga0307515_10128897 3300028794 Bacteria 2802
56 Ga0307515_10385465 3300028794 Bacteria 1032
57 Ga0265330_10000193 3300031235 Bacteria 47268
58 Ga0265332_10004969 3300031238 Bacteria 6181
59 Ga0265325_10008128 3300031241 Bacteria 6215
60 Ga0265339_10025902 3300031249 Bacteria 3361
61 Ga0265331_10010176 3300031250 Bacteria 5218
62 Ga0265327_10000042 3300031251 Bacteria 287487
63 Ga0265327_10001721 3300031251 Bacteria 25935
64 Ga0265327_10002046 3300031251 Bacteria 22695
65 Ga0265316_10540104 3300031344 Bacteria 830
66 Ga0307513_10000272 3300031456 Bacteria 75284
67 Ga0307513_10012711 3300031456 Bacteria 10366
68 Ga0307513_10065614 3300031456 Bacteria 3819
69 Ga0265342_10006833 3300031712 Bacteria 8433
70 Ga0307413_10505994 3300031824 Bacteria 971
71 Ga0307406_10504956 3300031901 Bacteria 981
72 Ga0307412_10156246 3300031911 Bacteria 1689
73 Ga0395900_0130645 3300037418 Bacteria 2574
74 Ga0395905_0000086 3300037471 Bacteria 153641
75 Ga0395905_0012499 3300037471 Bacteria 8171
76 Ga0395905_0068582 3300037471 Bacteria 3321
77 Ga0395901_0000004 3300038443 Bacteria 657361
78 Ga0395901_0001499 3300038443 Bacteria 24273
79 Ga0436365_0295040 3300039437 Bacteria 1782
80 Ga0436365_1722583 3300039437 Bacteria 40439
81 Ga0451577_0048825 3300042876 Bacteria 3779
82 Ga0451577_0291856 3300042876 Bacteria 1478
83 Ga0466969_0038255 3300044656 Bacteria 2415
84 Ga0466972_0097047 3300044658 Bacteria 1396
85 Ga0466982_0125107 3300044672 Bacteria 1584
86 Ga0466965_0044371 3300044683 Bacteria 2197
87 Ga0466966_0006853 3300044684 Bacteria 7545
88 Ga0453684_0587886 3300044712 Bacteria 1222
89 Ga0466968_0005535 3300044735 Bacteria 4730
90 Ga0466970_0353211 3300044765 Bacteria 834
91 Ga0466960_0178084 3300044901 Bacteria 1151
92 Ga0466959_0029970 3300045049 Bacteria 4030
93 Ga0451576_0000707 3300045051 Bacteria 67610
94 Ga0451576_0048295 3300045051 Bacteria 4472
95 Ga0451576_0120252 3300045051 Bacteria 2734
96 Ga0451576_0540859 3300045051 Bacteria 1224
97 Ga0466967_0021340 3300045976 Bacteria 5258
98 Ga0495603_0023066 3300046455 Bacteria 3768
99 Ga0495590_0000034 3300046457 Bacteria 129910
100 Ga0495638_0000072 3300046460 Bacteria 164926
101 Ga0495650_0000846 3300046471 Bacteria 36806
102 Ga0495650_0001279 3300046471 Bacteria 25850
103 Ga0495650_0015015 3300046471 Bacteria 3995
104 Ga0495607_0001240 3300046501 Bacteria 22879
105 Ga0495583_0000148 3300046506 Bacteria 118749
106 Ga0495606_0005329 3300046507 Bacteria 12362
107 Ga0495606_0011366 3300046507 Bacteria 7269
108 Ga0495610_0002322 3300046512 Bacteria 16078
109 Ga0495610_0007706 3300046512 Bacteria 7104
110 Ga0495610_0039341 3300046512 Bacteria 2392
111 Ga0495643_0000099 3300046522 Bacteria 145425
112 Ga0495643_0000135 3300046522 Bacteria 118587
113 Ga0495643_0022796 3300046522 Bacteria 3566
114 Ga0495648_0000037 3300046524 Bacteria 195401
115 Ga0495642_0016293 3300046528 Bacteria 2895
116 Ga0495621_0011276 3300046539 Bacteria 2760
117 Ga0495597_0000165 3300046542 Bacteria 58587
118 Ga0495597_0000172 3300046542 Bacteria 57536
119 Ga0495597_0011490 3300046542 Bacteria 4292
120 Ga0495622_0000040 3300046557 Bacteria 118542
121 Ga0495633_0000121 3300046558 Bacteria 105197
122 Ga0495633_0002318 3300046558 Bacteria 13555
123 Ga0495668_0001411 3300046616 Bacteria 23404
124 Ga0495625_0000023 3300046660 Bacteria 274067
125 Ga0495625_0005695 3300046660 Bacteria 11284
126 Ga0495625_0016495 3300046660 Bacteria 5810
127 Ga0495625_0027666 3300046660 Bacteria 4262
128 Ga0495661_0005826 3300046665 Bacteria 8713
129 Ga0495671_0038115 3300046692 Bacteria 2430
130 Ga0495649_0107498 3300046694 Bacteria 1480
131 Ga0495660_0103108 3300046810 Bacteria 1466
132 Ga0495672_0000005 3300047320 Bacteria 593294
133 Ga0495672_0000277 3300047320 Bacteria 71082
134 Ga0495672_0134036 3300047320 Bacteria 1300
135 Ga0495676_0012801 3300047321 Bacteria 7544
136 Ga0495687_000666 3300047443 Bacteria 39241
137 Ga0495687_000710 3300047443 Bacteria 36977
138 Ga0495677_0039602 3300047445 Bacteria 1723
139 Ga0495686_0009885 3300047472 Bacteria 6836
140 Ga0495614_0040877 3300048089 Bacteria 1990
141 Ga0496102_0017736 3300048905 Bacteria 6241
142 Ga0496103_0006897 3300048906 Bacteria 6785
143 Ga0496105_0366789 3300048908 Bacteria 1148
144 Ga0496109_0234907 3300048912 Bacteria 1725
145 Ga0496116_0021569 3300048919 Bacteria 4852
146 Ga0496117_0150172 3300048920 Bacteria 1380
147 Ga0496119_0009948 3300048922 Bacteria 8068
148 Ga0496120_0011159 3300048923 Bacteria 6201
149 Ga0496120_0181778 3300048923 Bacteria 1032
150 Ga0496121_0001233 3300048924 Bacteria 44430
151 Ga0496121_0011037 3300048924 Bacteria 10083
152 Ga0496121_0058508 3300048924 Bacteria 3186
153 Ga0496122_0049134 3300048925 Bacteria 3235
154 Ga0496123_0177904 3300048926 Bacteria 1114
155 Ga0496124_0028922 3300048927 Bacteria 4947
156 Ga0496124_0121925 3300048927 Bacteria 2082
157 Ga0496125_0000023 3300048928 Bacteria 449042
158 Ga0495678_000262 3300049459 Bacteria 58570
159 Ga0495678_059456 3300049459 Bacteria 1440
160 Ga0501031_0000368 3300049568 Bacteria 26339
161 Ga0501032_0002916 3300049569 Bacteria 13298
162 Ga0501033_0002168 3300049570 Bacteria 16958
163 Ga0501034_0000039 3300049571 Bacteria 237357
164 Ga0501034_0398485 3300049571 Bacteria 1299
165 Ga0501036_0000052 3300049572 Bacteria 74795
166 Ga0501037_0000025 3300049573 Bacteria 143276
167 Ga0501037_0131073 3300049573 Bacteria 1798
168 Ga0501038_0000168 3300049574 Bacteria 55496
169 Ga0501038_0433847 3300049574 Bacteria 1012
170 Ga0501039_0001742 3300049575 Bacteria 16050
171 Ga0501039_0208607 3300049575 Bacteria 1536
172 Ga0501042_0042204 3300049578 Bacteria 3246
173 Ga0501043_0034074 3300049579 Bacteria 4005
174 Ga0501046_0000231 3300049580 Bacteria 57655
175 Ga0501047_0000379 3300049581 Bacteria 50147
176 Ga0501047_0151634 3300049581 Bacteria 2194
177 Ga0501048_0000585 3300049582 Bacteria 25849
178 Ga0501067_0000025 3300049583 Bacteria 91481
179 Ga0501068_0000944 3300049584 Bacteria 15231
180 Ga0501069_0001325 3300049585 Bacteria 12134
181 Ga0501070_0096291 3300049586 Bacteria 2448
182 Ga0501071_0018672 3300049587 Bacteria 4807
183 Ga0501072_0001295 3300049588 Bacteria 18708
184 Ga0501073_0000135 3300049589 Bacteria 47869
185 Ga0501073_0181002 3300049589 Bacteria 1459
186 Ga0501074_0001792 3300049590 Bacteria 14692
187 Ga0501079_0017767 3300049741 Bacteria 5434
188 Ga0501080_0001229 3300049742 Bacteria 21299
189 Ga0501083_0001024 3300049744 Bacteria 18626
190 Ga0501035_0000052 3300049822 Bacteria 143038
191 Ga0501035_0067973 3300049822 Bacteria 3160
192 Ga0501035_0183378 3300049822 Bacteria 1802
193 Ga0501035_0197092 3300049822 Bacteria 1729
194 Ga0501044_0000217 3300049823 Bacteria 73242
195 Ga0501044_0181404 3300049823 Bacteria 2072
196 Ga0501045_0006921 3300049824 Bacteria 7858
197 nmdc:mga00v17_2110_c1 3300050491 Bacteria 10225
198 nmdc:mga0k408_1020_c1 3300050493 Bacteria 15354
199 nmdc:mga0k408_148968_c1 3300050493 Bacteria 1393
200 Ga0500651_0036105 3300053093 Bacteria 3114
201 Ga0500562_001173 3300053108 Bacteria 6460
202 Ga0500572_001745 3300053111 Bacteria 5639
203 Ga0500559_0248850 3300053136 Bacteria 837
204 Ga0500586_001473 3300053145 Bacteria 4973
205 Ga0500586_037032 3300053145 Bacteria 1638
206 Ga0500616_0099304 3300053153 Bacteria 1426
207 Ga0501084_0012682 3300054114 Bacteria 6984

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025944 Ga0207661_10000217 Ga0207661_1000021722 233
2 3300005455 Ga0070663_100017763 Ga0070663_1000177633 235
3 3300025949 Ga0207667_10122118 Ga0207667_101221183 235
4 3300026067 Ga0207678_10036423 Ga0207678_100364232 235
5 3300049589 Ga0501073_0181002 Ga0501073_0181002_440_1231 237
6 3300037418 Ga0395900_0130645 Ga0395900_0130645_1382_2134 246
7 iso_pu_bacteria 2898795034 2898795118 246
8 iso_pu_bacteria 2919679072 2919681742 247
9 3300005468 Ga0070707_100613182 Ga0070707_1006131822 250
10 3300013308 Ga0157375_10000023 Ga0157375_1000002390 250
11 3300049573 Ga0501037_0131073 Ga0501037_0131073_1018_1773 250
12 3300049574 Ga0501038_0433847 Ga0501038_0433847_203_991 250
13 3300045051 Ga0451576_0000707 Ga0451576_0000707_37947_38723 251
14 3300028794 Ga0307515_10000103 Ga0307515_1000010319 252
15 iso_pu_bacteria 2511231028 2511395363 252
16 iso_pu_bacteria 2513237095 2513647535 252
17 iso_pu_bacteria 2524023205 2524436261 252
18 iso_pu_bacteria 2744054633 2745080784 252
19 iso_pu_bacteria 2841957949 2841962904 252
20 iso_pu_bacteria 2888378607 2888385472 252
21 3300031250 Ga0265331_10010176 Ga0265331_100101763 253
22 3300031251 Ga0265327_10000042 Ga0265327_10000042248 253
23 iso_pu_bacteria 2738541300 2738843235 253
24 iso_pu_bacteria 2534681786 2535486135 254
25 iso_pu_bacteria 2643221596 2643991779 254
26 iso_pu_bacteria 2643221652 2644293523 254
27 iso_pu_bacteria 2648501241 2649119059 254
28 iso_pu_bacteria 2842333319 2842338129 254
29 iso_pu_bacteria 2891048133 2891050585 254
30 3300046512 Ga0495610_0002322 Ga0495610_0002322_2307_3074 255
31 3300047472 Ga0495686_0009885 Ga0495686_0009885_1869_2636 255
32 iso_pu_bacteria 2842711865 2842715638 255
33 iso_pu_bacteria 2857537821 2857542402 255
34 iso_pu_bacteria 2881101125 2881104456 255
35 iso_pu_bacteria 2894023352 2894026283 255
36 iso_pu_bacteria 2904424332 2904427563 255
37 iso_pu_bacteria 2939631187 2939633452 255
38 iso_pu_bacteria 2941479691 2941484797 255
39 3300004625 Ga0055543_1001942 Ga0055543_10019423 256
40 3300005339 Ga0070660_100064024 Ga0070660_1000640243 256
41 3300005563 Ga0068855_100521702 Ga0068855_1005217022 256
42 3300007265 Ga0099794_10040196 Ga0099794_100401962 256
43 3300031456 Ga0307513_10000272 Ga0307513_1000027243 256
44 3300044656 Ga0466969_0038255 Ga0466969_0038255_447_1229 256
45 3300044901 Ga0466960_0178084 Ga0466960_0178084_346_1128 256
46 3300045976 Ga0466967_0021340 Ga0466967_0021340_1089_1871 256
47 3300049568 Ga0501031_0000368 Ga0501031_0000368_14009_14791 256
48 3300049570 Ga0501033_0002168 Ga0501033_0002168_9754_10536 256
49 3300049571 Ga0501034_0000039 Ga0501034_0000039_179207_179989 256
50 3300049572 Ga0501036_0000052 Ga0501036_0000052_6153_6935 256
51 3300049573 Ga0501037_0000025 Ga0501037_0000025_81776_82558 256
52 3300049574 Ga0501038_0000168 Ga0501038_0000168_16253_17035 256
53 3300049575 Ga0501039_0001742 Ga0501039_0001742_14280_15062 256
54 3300049578 Ga0501042_0042204 Ga0501042_0042204_2344_3126 256
55 3300049579 Ga0501043_0034074 Ga0501043_0034074_485_1267 256
56 3300049580 Ga0501046_0000231 Ga0501046_0000231_1974_2756 256
57 3300049581 Ga0501047_0000379 Ga0501047_0000379_47455_48237 256
58 3300049582 Ga0501048_0000585 Ga0501048_0000585_18944_19726 256
59 3300049583 Ga0501067_0000025 Ga0501067_0000025_56082_56864 256
60 3300049584 Ga0501068_0000944 Ga0501068_0000944_9766_10548 256
61 3300049585 Ga0501069_0001325 Ga0501069_0001325_1101_1883 256
62 3300049586 Ga0501070_0096291 Ga0501070_0096291_356_1138 256
63 3300049587 Ga0501071_0018672 Ga0501071_0018672_3290_4072 256
64 3300049588 Ga0501072_0001295 Ga0501072_0001295_10520_11302 256
65 3300049589 Ga0501073_0000135 Ga0501073_0000135_12431_13213 256
66 3300049590 Ga0501074_0001792 Ga0501074_0001792_7758_8540 256
67 3300049741 Ga0501079_0017767 Ga0501079_0017767_3481_4263 256
68 3300049742 Ga0501080_0001229 Ga0501080_0001229_12201_12983 256
69 3300049744 Ga0501083_0001024 Ga0501083_0001024_10026_10808 256
70 3300049822 Ga0501035_0000052 Ga0501035_0000052_20655_21437 256
71 3300049823 Ga0501044_0000217 Ga0501044_0000217_4600_5382 256
72 3300049824 Ga0501045_0006921 Ga0501045_0006921_4237_5019 256
73 3300053093 Ga0500651_0036105 Ga0500651_0036105_1516_2349 256
74 3300053108 Ga0500562_001173 Ga0500562_001173_2515_3333 256
75 3300054114 Ga0501084_0012682 Ga0501084_0012682_5019_5801 256
76 3300006175 Ga0070712_100022623 Ga0070712_1000226233 257
77 3300031238 Ga0265332_10004969 Ga0265332_100049695 257
78 3300031251 Ga0265327_10002046 Ga0265327_100020461 257
79 3300037471 Ga0395905_0012499 Ga0395905_0012499_1584_2357 257
80 3300045051 Ga0451576_0540859 Ga0451576_0540859_357_1157 257
81 3300046660 Ga0495625_0005695 Ga0495625_0005695_6955_7728 257
82 3300047320 Ga0495672_0134036 Ga0495672_0134036_287_1081 257
83 3300048923 Ga0496120_0181778 Ga0496120_0181778_56_877 257
84 3300048924 Ga0496121_0058508 Ga0496121_0058508_731_1552 257
85 3300053111 Ga0500572_001745 Ga0500572_001745_278_1054 257
86 3300053136 Ga0500559_0248850 Ga0500559_0248850_35_811 257
87 3300005577 Ga0068857_100338382 Ga0068857_1003383822 258
88 3300006051 Ga0075364_10010722 Ga0075364_100107222 258
89 3300037471 Ga0395905_0000086 Ga0395905_0000086_106592_107407 258
90 3300038443 Ga0395901_0001499 Ga0395901_0001499_16681_17457 258
91 3300042876 Ga0451577_0048825 Ga0451577_0048825_861_1670 258
92 3300044658 Ga0466972_0097047 Ga0466972_0097047_16_792 258
93 3300044683 Ga0466965_0044371 Ga0466965_0044371_352_1128 258
94 3300044684 Ga0466966_0006853 Ga0466966_0006853_128_904 258
95 3300044765 Ga0466970_0353211 Ga0466970_0353211_34_810 258
96 3300045051 Ga0451576_0048295 Ga0451576_0048295_831_1640 258
97 3300046810 Ga0495660_0103108 Ga0495660_0103108_291_1067 258
98 3300047320 Ga0495672_0000005 Ga0495672_0000005_210813_211589 258
99 3300048912 Ga0496109_0234907 Ga0496109_0234907_837_1664 258
100 3300050491 nmdc:mga00v17_2110_c1 nmdc:mga00v17_2110_c1_174_971 258
101 3300002738 JGI25154J39366_1000685 JGI25154J39366_100068513 259
102 3300003320 rootH2_10120352 rootH2_101203523 259
103 3300003771 Ga0055526_1000001 Ga0055526_1000001306 259
104 3300003794 Ga0055531_10004665 Ga0055531_100046656 259
105 3300005290 Ga0065712_10228636 Ga0065712_102286362 259
106 3300005327 Ga0070658_10077269 Ga0070658_100772692 259
107 3300005353 Ga0070669_100033544 Ga0070669_1000335444 259
108 3300005356 Ga0070674_100029645 Ga0070674_1000296452 259
109 3300005356 Ga0070674_100041083 Ga0070674_1000410832 259
110 3300005364 Ga0070673_100014397 Ga0070673_1000143974 259
111 3300005367 Ga0070667_100058791 Ga0070667_1000587914 259
112 3300005457 Ga0070662_100245444 Ga0070662_1002454441 259
113 3300005543 Ga0070672_100009399 Ga0070672_1000093994 259
114 3300005543 Ga0070672_100469239 Ga0070672_1004692391 259
115 3300005548 Ga0070665_100116235 Ga0070665_1001162352 259
116 3300005719 Ga0068861_100413289 Ga0068861_1004132892 259
117 3300005719 Ga0068861_100452120 Ga0068861_1004521202 259
118 3300005842 Ga0068858_100009761 Ga0068858_1000097618 259
119 3300005843 Ga0068860_100016607 Ga0068860_1000166074 259
120 3300006195 Ga0075366_10124570 Ga0075366_101245702 259
121 3300013297 Ga0157378_10448238 Ga0157378_104482382 259
122 3300014968 Ga0157379_10184134 Ga0157379_101841342 259
123 3300025246 Ga0209646_1000054 Ga0209646_1000054224 259
124 3300025273 Ga0209673_1052263 Ga0209673_10522632 259
125 3300025295 Ga0209564_1000002 Ga0209564_1000002261 259
126 3300025303 Ga0209051_1002875 Ga0209051_10028758 259
127 3300025304 Ga0209257_1000015 Ga0209257_1000015238 259
128 3300025932 Ga0207690_10456707 Ga0207690_104567072 259
129 3300025933 Ga0207706_10347067 Ga0207706_103470672 259
130 3300025937 Ga0207669_10052697 Ga0207669_100526973 259
131 3300025937 Ga0207669_10076201 Ga0207669_100762012 259
132 3300025940 Ga0207691_10029143 Ga0207691_100291434 259
133 3300025972 Ga0207668_10459606 Ga0207668_104596061 259
134 3300025986 Ga0207658_10188162 Ga0207658_101881622 259
135 3300026035 Ga0207703_10171541 Ga0207703_101715413 259
136 3300026089 Ga0207648_10207479 Ga0207648_102074792 259
137 3300026089 Ga0207648_10293332 Ga0207648_102933322 259
138 3300026121 Ga0207683_10302696 Ga0207683_103026962 259
139 3300028381 Ga0268264_10005440 Ga0268264_100054407 259
140 3300028794 Ga0307515_10000184 Ga0307515_1000018451 259
141 3300028794 Ga0307515_10128897 Ga0307515_101288973 259
142 3300028794 Ga0307515_10385465 Ga0307515_103854651 259
143 3300031235 Ga0265330_10000193 Ga0265330_1000019326 259
144 3300031241 Ga0265325_10008128 Ga0265325_100081282 259
145 3300031249 Ga0265339_10025902 Ga0265339_100259022 259
146 3300031251 Ga0265327_10001721 Ga0265327_100017214 259
147 3300031344 Ga0265316_10540104 Ga0265316_105401041 259
148 3300031456 Ga0307513_10012711 Ga0307513_100127116 259
149 3300031456 Ga0307513_10065614 Ga0307513_100656142 259
150 3300031712 Ga0265342_10006833 Ga0265342_100068332 259
151 3300031824 Ga0307413_10505994 Ga0307413_105059941 259
152 3300031901 Ga0307406_10504956 Ga0307406_105049561 259
153 3300031911 Ga0307412_10156246 Ga0307412_101562462 259
154 3300037471 Ga0395905_0068582 Ga0395905_0068582_513_1337 259
155 3300038443 Ga0395901_0000004 Ga0395901_0000004_540704_541498 259
156 3300039437 Ga0436365_0295040 Ga0436365_0295040_307_1086 259
157 3300039437 Ga0436365_1722583 Ga0436365_1722583_5682_6527 259
158 3300042876 Ga0451577_0291856 Ga0451577_0291856_524_1309 259
159 3300044672 Ga0466982_0125107 Ga0466982_0125107_122_901 259
160 3300044712 Ga0453684_0587886 Ga0453684_0587886_44_823 259
161 3300044735 Ga0466968_0005535 Ga0466968_0005535_3737_4516 259
162 3300045049 Ga0466959_0029970 Ga0466959_0029970_3230_4018 259
163 3300045051 Ga0451576_0120252 Ga0451576_0120252_1355_2134 259
164 3300046455 Ga0495603_0023066 Ga0495603_0023066_2815_3609 259
165 3300046457 Ga0495590_0000034 Ga0495590_0000034_56927_57706 259
166 3300046460 Ga0495638_0000072 Ga0495638_0000072_60643_61422 259
167 3300046471 Ga0495650_0000846 Ga0495650_0000846_6706_7491 259
168 3300046471 Ga0495650_0001279 Ga0495650_0001279_891_1670 259
169 3300046471 Ga0495650_0015015 Ga0495650_0015015_2937_3716 259
170 3300046501 Ga0495607_0001240 Ga0495607_0001240_17430_18209 259
171 3300046506 Ga0495583_0000148 Ga0495583_0000148_60546_61325 259
172 3300046507 Ga0495606_0005329 Ga0495606_0005329_339_1118 259
173 3300046507 Ga0495606_0011366 Ga0495606_0011366_934_1713 259
174 3300046512 Ga0495610_0007706 Ga0495610_0007706_2813_3592 259
175 3300046512 Ga0495610_0039341 Ga0495610_0039341_936_1715 259
176 3300046522 Ga0495643_0000099 Ga0495643_0000099_27890_28669 259
177 3300046522 Ga0495643_0000135 Ga0495643_0000135_56914_57693 259
178 3300046522 Ga0495643_0022796 Ga0495643_0022796_2184_3041 259
179 3300046524 Ga0495648_0000037 Ga0495648_0000037_134075_134854 259
180 3300046528 Ga0495642_0016293 Ga0495642_0016293_814_1593 259
181 3300046539 Ga0495621_0011276 Ga0495621_0011276_678_1463 259
182 3300046542 Ga0495597_0000165 Ga0495597_0000165_57224_58003 259
183 3300046542 Ga0495597_0000172 Ga0495597_0000172_23114_23893 259
184 3300046542 Ga0495597_0011490 Ga0495597_0011490_1878_2657 259
185 3300046557 Ga0495622_0000040 Ga0495622_0000040_57220_57999 259
186 3300046558 Ga0495633_0000121 Ga0495633_0000121_24837_25616 259
187 3300046558 Ga0495633_0002318 Ga0495633_0002318_9530_10312 259
188 3300046616 Ga0495668_0001411 Ga0495668_0001411_614_1393 259
189 3300046660 Ga0495625_0000023 Ga0495625_0000023_245121_245900 259
190 3300046660 Ga0495625_0016495 Ga0495625_0016495_75_959 259
191 3300046660 Ga0495625_0027666 Ga0495625_0027666_2113_2892 259
192 3300046665 Ga0495661_0005826 Ga0495661_0005826_5359_6138 259
193 3300046692 Ga0495671_0038115 Ga0495671_0038115_545_1324 259
194 3300046694 Ga0495649_0107498 Ga0495649_0107498_550_1329 259
195 3300047320 Ga0495672_0000277 Ga0495672_0000277_15813_16592 259
196 3300047321 Ga0495676_0012801 Ga0495676_0012801_4103_4897 259
197 3300047443 Ga0495687_000666 Ga0495687_000666_9915_10694 259
198 3300047443 Ga0495687_000710 Ga0495687_000710_25660_26439 259
199 3300047445 Ga0495677_0039602 Ga0495677_0039602_702_1481 259
200 3300048089 Ga0495614_0040877 Ga0495614_0040877_91_885 259
201 3300048905 Ga0496102_0017736 Ga0496102_0017736_4657_5454 259
202 3300048906 Ga0496103_0006897 Ga0496103_0006897_1384_2163 259
203 3300048908 Ga0496105_0366789 Ga0496105_0366789_74_859 259
204 3300048919 Ga0496116_0021569 Ga0496116_0021569_1507_2292 259
205 3300048920 Ga0496117_0150172 Ga0496117_0150172_392_1177 259
206 3300048922 Ga0496119_0009948 Ga0496119_0009948_2944_3729 259
207 3300048923 Ga0496120_0011159 Ga0496120_0011159_4376_5161 259
208 3300048924 Ga0496121_0001233 Ga0496121_0001233_5364_6149 259
209 3300048924 Ga0496121_0011037 Ga0496121_0011037_3666_4466 259
210 3300048925 Ga0496122_0049134 Ga0496122_0049134_722_1507 259
211 3300048926 Ga0496123_0177904 Ga0496123_0177904_22_807 259
212 3300048927 Ga0496124_0028922 Ga0496124_0028922_3658_4443 259
213 3300048927 Ga0496124_0121925 Ga0496124_0121925_188_967 259
214 3300048928 Ga0496125_0000023 Ga0496125_0000023_47110_47895 259
215 3300049459 Ga0495678_000262 Ga0495678_000262_31666_32445 259
216 3300049459 Ga0495678_059456 Ga0495678_059456_342_1121 259
217 3300049569 Ga0501032_0002916 Ga0501032_0002916_11899_12693 259
218 3300049571 Ga0501034_0398485 Ga0501034_0398485_271_1053 259
219 3300049575 Ga0501039_0208607 Ga0501039_0208607_368_1147 259
220 3300049581 Ga0501047_0151634 Ga0501047_0151634_22_804 259
221 3300049822 Ga0501035_0067973 Ga0501035_0067973_1953_2747 259
222 3300049822 Ga0501035_0183378 Ga0501035_0183378_117_899 259
223 3300049822 Ga0501035_0197092 Ga0501035_0197092_102_908 259
224 3300049823 Ga0501044_0181404 Ga0501044_0181404_1127_1909 259
225 3300050493 nmdc:mga0k408_1020_c1 nmdc:mga0k408_1020_c1_12232_13032 259
226 3300050493 nmdc:mga0k408_148968_c1 nmdc:mga0k408_148968_c1_119_913 259
227 3300053145 Ga0500586_001473 Ga0500586_001473_1722_2549 259
228 3300053145 Ga0500586_037032 Ga0500586_037032_344_1126 259
229 3300053153 Ga0500616_0099304 Ga0500616_0099304_543_1370 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

21

278

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ngf-assembly1.cif.gz_A crystal structure of ap endonuclease, family 2 from brucella melitensis 0.983 1 256
1k77-assembly1.cif.gz_A crystal structure of ec1530, a putative oxygenase from escherichia coli 0.9721 1 259
1k77-assembly1.cif.gz_A crystal structure of ec1530, a putative oxygenase from escherichia coli 0.9684 1 259
3ngf-assembly1.cif.gz_A crystal structure of ap endonuclease, family 2 from brucella melitensis 0.968 1 256
6wn6-assembly1.cif.gz_A crystal structure of 3-keto-d-glucoside 4-epimerase, ycjr, from e. coli, apo form 0.832 1 256
ID Description Score Start End Superfamily
af_P30147_1_258_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9911 1 257 3.20.20.150
af_P30147_1_258_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9835 1 257 3.20.20.150
af_Q7T3H9_4_269_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9719 3 257 3.20.20.150
af_Q11185_2_259_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9693 1 257 3.20.20.150
1k77A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.9671 3 259 3.20.20.150
ID Description Score Start End GO Terms
AF-L9PBB7-F1-model_v4 deleted 1.001 1 259
AF-A0A1E7VPW6-F1-model_v4 deleted 1.001 1 259
AF-A0A7W2ICL9-F1-model_v4 Hydroxypyruvate isomerase (EC 5.3.1.22) 1 1 259 GO:0008903
GO:0046487
AF-A0A4V2A6E6-F1-model_v4 deleted 0.9995 1 203
AF-A0A527GKR5-F1-model_v4 Hydroxypyruvate isomerase 0.9982 119 234 GO:0008903
GO:0046487

Feature Viewer

pLDDT pTM Quality
96.56 0.93 High
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Predicted Structure (AlphaFold2)

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