F341412

General Info

Members Datasets Scaffolds Average Seq Length
228 145 211 302

Family's Representative Sequence

Representative Sequence 3300049575|Ga0501039_0090631|Ga0501039_0090631_631_1674
Length 347
Sequence MQGVGAAGRGQESAWLLPASAMKFIRSRISDQAIAIALIVPSIVAVSVFVYGFIAWSGLVSVSQWDTVRPDYTFVGLQNFRDLINNFRFQIDVRNTIVFTLSFVIACLTIGFVLAALLDRQIKGEGVFRSIYLFPMAVSFIVTGVAWRWLLAPRAGVNLLAEKAGIDGVDYGWYTDPTVAYIHETSRLGEALNSVGLGFIADPNFGVPLAMFSVVIAATWQMSGFVMVLYLAGLRAIPEDLKEAARADGAGELQVLRHVSLPLLRPVTLSAMIILGHQSLKIFDLVVSMTQRGPGFATDVPALFMFETTFQGNHFARGGAISIIMLLTVSLLVVPYLFWSLRREARL

Samples

Sample ID Description Type Environment
1 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
2 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
3 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
4 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
5 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
6 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
7 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
8 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
9 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
10 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
11 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
12 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
13 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
51 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
66 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
70 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
71 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
82 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
83 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
84 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
99 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
120 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
135 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
142 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
143 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
144 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
145 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.79
Metatranscriptomes 1.75
Isolates 7.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0.88
Rhizoplane 1.32
Rhizosphere 90.35
Stem 0
Stem Tuber 0
Unclassified 6.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25157J39369_1000744 3300002741 Bacteria 17229
2 Ga0070683_100004127 3300005329 Bacteria 11901
3 Ga0070675_100298576 3300005354 Unclassified 1419
4 Ga0070674_100433437 3300005356 Bacteria 1081
5 Ga0070705_100006681 3300005440 Bacteria 5670
6 Ga0070708_100006060 3300005445 Bacteria 9616
7 Ga0070708_100028011 3300005445 Bacteria 4843
8 Ga0070678_100065459 3300005456 Bacteria 2699
9 Ga0070706_100000554 3300005467 Bacteria 43511
10 Ga0070706_100020681 3300005467 Bacteria 6064
11 Ga0070706_100075896 3300005467 Bacteria 3111
12 Ga0070706_100377757 3300005467 Bacteria 1320
13 Ga0070707_100000534 3300005468 Bacteria 37978
14 Ga0070707_100011365 3300005468 Bacteria 8300
15 Ga0070707_100065491 3300005468 Bacteria 3490
16 Ga0070707_100086414 3300005468 Bacteria 3033
17 Ga0070707_100240971 3300005468 Unclassified 1760
18 Ga0070698_100000751 3300005471 Bacteria 34988
19 Ga0070698_100030393 3300005471 Bacteria 5600
20 Ga0070698_100051104 3300005471 Bacteria 4211
21 Ga0070698_100076762 3300005471 Bacteria 3342
22 Ga0070698_100113088 3300005471 Bacteria 2680
23 Ga0070698_100169864 3300005471 Bacteria 2122
24 Ga0070699_100000889 3300005518 Bacteria 27908
25 Ga0070699_100008438 3300005518 Bacteria 8926
26 Ga0070699_100018627 3300005518 Bacteria 5962
27 Ga0070699_100247714 3300005518 Bacteria 1591
28 Ga0070684_100159633 3300005535 Unclassified 2045
29 Ga0070697_100000841 3300005536 Bacteria 23066
30 Ga0070697_100009965 3300005536 Bacteria 7416
31 Ga0070697_100038398 3300005536 Bacteria 3868
32 Ga0070697_100075792 3300005536 Bacteria 2765
33 Ga0070695_100043831 3300005545 Bacteria 2846
34 Ga0068855_100000355 3300005563 Bacteria 56724
35 Ga0068858_100344718 3300005842 Unclassified 1426
36 Ga0081455_10024986 3300005937 Bacteria 5521
37 Ga0081538_10000172 3300005981 Bacteria 69506
38 Ga0081538_10019958 3300005981 Bacteria 4954
39 Ga0070717_10086939 3300006028 Bacteria 2632
40 Ga0070716_100071737 3300006173 Bacteria 2037
41 Ga0075428_100004863 3300006844 Bacteria 14906
42 Ga0075428_100014921 3300006844 Bacteria 8633
43 Ga0075428_100170920 3300006844 Bacteria 2356
44 Ga0075430_100006383 3300006846 Bacteria 9941
45 Ga0075430_100186949 3300006846 Bacteria 1723
46 Ga0075430_100212951 3300006846 Bacteria 1603
47 Ga0075431_100007220 3300006847 Bacteria 11054
48 Ga0075431_100045783 3300006847 Bacteria 4510
49 Ga0075431_100456473 3300006847 Bacteria 1273
50 Ga0075433_10023240 3300006852 Bacteria 5215
51 Ga0075433_10034516 3300006852 Bacteria 4345
52 Ga0075434_100058347 3300006871 Bacteria 3836
53 Ga0075429_100002707 3300006880 Bacteria 14940
54 Ga0075429_100026459 3300006880 Bacteria 5037
55 Ga0075429_100070551 3300006880 Bacteria 3043
56 Ga0075429_100076903 3300006880 Bacteria 2907
57 Ga0075436_100055627 3300006914 Bacteria 2732
58 Ga0075435_100005451 3300007076 Bacteria 8886
59 Ga0075435_100029545 3300007076 Bacteria 4302
60 Ga0099794_10009139 3300007265 Bacteria 4149
61 Ga0099794_10147140 3300007265 Bacteria 1195
62 Ga0105240_10071682 3300009093 Bacteria 4284
63 Ga0114129_10006544 3300009147 Bacteria 16532
64 Ga0114129_10010787 3300009147 Bacteria 13022
65 Ga0114129_10119018 3300009147 Bacteria 3638
66 Ga0105243_10124608 3300009148 Bacteria 2177
67 Ga0105243_10618751 3300009148 Bacteria 1045
68 Ga0105242_10192634 3300009176 Unclassified 1806
69 Ga0157369_10099394 3300013105 Bacteria 3102
70 Ga0157378_10028513 3300013297 Bacteria 4927
71 Ga0157378_10058991 3300013297 Bacteria 3423
72 Ga0157379_10502800 3300014968 Bacteria 1124
73 Ga0209026_1000116 3300025250 Bacteria 133228
74 Ga0209759_1000153 3300025256 Bacteria 119494
75 Ga0207653_10005626 3300025885 Bacteria 3913
76 Ga0207684_10000001 3300025910 Bacteria 1115726
77 Ga0207684_10002103 3300025910 Bacteria 20410
78 Ga0207684_10314569 3300025910 Bacteria 1350
79 Ga0207662_10024256 3300025918 Bacteria 3489
80 Ga0207646_10000099 3300025922 Bacteria 116241
81 Ga0207646_10005437 3300025922 Bacteria 13401
82 Ga0207646_10024375 3300025922 Bacteria 5542
83 Ga0207646_10055240 3300025922 Bacteria 3551
84 Ga0207665_10037657 3300025939 Bacteria 3219
85 Ga0207667_10003426 3300025949 Bacteria 19572
86 Ga0207677_10115958 3300026023 Bacteria 2004
87 Ga0207703_10201755 3300026035 Unclassified 1768
88 Ga0209983_1008295 3300027665 Bacteria 2124
89 Ga0209588_1000209 3300027671 Bacteria 15784
90 Ga0209998_10004896 3300027717 Bacteria 2818
91 Ga0265326_10001383 3300028558 Bacteria 8540
92 Ga0265319_1005463 3300028563 Bacteria 6077
93 Ga0265318_10014216 3300028577 Bacteria 3346
94 Ga0265323_10002738 3300028653 Bacteria 7950
95 Ga0265322_10001731 3300028654 Bacteria 6926
96 Ga0265327_10061703 3300031251 Bacteria 1911
97 Ga0265316_10004142 3300031344 Bacteria 14495
98 Ga0316576_10026600 3300031727 Bacteria 4061
99 Ga0316576_10144906 3300031727 Unclassified 1789
100 Ga0316577_10006793 3300031733 Bacteria 6072
101 Ga0316577_10015437 3300031733 Bacteria 4202
102 Ga0316577_10016226 3300031733 Bacteria 4102
103 Ga0316577_10037816 3300031733 Unclassified 2698
104 Ga0316593_10013601 3300032168 Unclassified 2413
105 Ga0316596_1010212 3300033541 Unclassified 2268
106 Ga0316596_1022906 3300033541 Bacteria 1597
107 Ga0316582_0082338 3300036647 Bacteria 2104
108 Ga0316582_0105388 3300036647 Unclassified 1872
109 Ga0316584_0020062 3300036712 Bacteria 4841
110 Ga0316584_0024505 3300036712 Bacteria 4416
111 Ga0316584_0065623 3300036712 Bacteria 2719
112 Ga0316584_0099822 3300036712 Bacteria 2174
113 Ga0395899_0000595 3300037312 Bacteria 37965
114 Ga0395900_0000015 3300037418 Bacteria 384313
115 Ga0395900_0032955 3300037418 Bacteria 5331
116 Ga0395900_0100173 3300037418 Bacteria 2976
117 Ga0395898_0007333 3300037466 Bacteria 11708
118 Ga0395905_0007705 3300037471 Bacteria 10685
119 Ga0436364_0916436 3300037853 Bacteria 9023
120 Ga0395901_0000128 3300038443 Bacteria 98098
121 Ga0400484_21200 3300038725 Unclassified 1483
122 Ga0400483_120971 3300039062 Bacteria 17509
123 Ga0400489_66722 3300039093 Bacteria 6012
124 Ga0400487_59448 3300039110 Bacteria 4188
125 Ga0436365_0353221 3300039437 Bacteria 3206
126 Ga0436360_0392925 3300039438 Bacteria 1426
127 Ga0436362_0532154 3300039453 Bacteria 1584
128 Ga0451843_0181588 3300041509 Bacteria 2025
129 Ga0451577_0188011 3300042876 Bacteria 1863
130 Ga0451577_0347625 3300042876 Unclassified 1345
131 Ga0453683_0018512 3300044673 Bacteria 4472
132 Ga0453683_0100336 3300044673 Unclassified 1817
133 Ga0466966_0000637 3300044684 Bacteria 22314
134 Ga0466963_0050524 3300044694 Bacteria 2752
135 Ga0453684_0000003 3300044712 Bacteria 1481694
136 Ga0453684_0000240 3300044712 Bacteria 235672
137 Ga0453684_0005763 3300044712 Bacteria 24188
138 Ga0453684_0033068 3300044712 Bacteria 7217
139 Ga0453684_0040924 3300044712 Bacteria 6281
140 Ga0453684_0143231 3300044712 Bacteria 2850
141 Ga0453684_0183570 3300044712 Bacteria 2454
142 Ga0453684_0237830 3300044712 Bacteria 2098
143 Ga0453684_0407525 3300044712 Unclassified 1521
144 Ga0453684_0667921 3300044712 Bacteria 1132
145 Ga0466971_0012595 3300044719 Bacteria 3709
146 Ga0466957_0102175 3300044842 Bacteria 1808
147 Ga0451576_0535652 3300045051 Bacteria 1230
148 Ga0466958_0080447 3300045836 Bacteria 2005
149 Ga0495610_0001005 3300046512 Bacteria 26004
150 Ga0495632_0034119 3300046519 Bacteria 2607
151 Ga0495625_0001757 3300046660 Bacteria 25057
152 Ga0495660_0040038 3300046810 Bacteria 2599
153 Ga0495686_0040079 3300047472 Bacteria 2989
154 Ga0496108_0000067 3300048911 Bacteria 116015
155 Ga0496108_0564750 3300048911 Bacteria 992
156 Ga0496110_0099360 3300048913 Bacteria 2609
157 Ga0501033_0076941 3300049570 Bacteria 2449
158 Ga0501036_0087356 3300049572 Bacteria 2635
159 Ga0501038_0000991 3300049574 Bacteria 25533
160 Ga0501038_0378686 3300049574 Bacteria 1098
161 Ga0501039_0055778 3300049575 Bacteria 3061
162 Ga0501039_0090631 3300049575 Bacteria 2383
163 Ga0501041_0034406 3300049577 Bacteria 3067
164 Ga0501046_0109567 3300049580 Bacteria 2111
165 Ga0501048_0031912 3300049582 Bacteria 3809
166 Ga0501048_0181578 3300049582 Bacteria 1492
167 Ga0501067_0022508 3300049583 Bacteria 3488
168 Ga0501068_0045434 3300049584 Bacteria 2646
169 Ga0501071_0031098 3300049587 Bacteria 3781
170 Ga0501074_0000170 3300049590 Bacteria 34950
171 Ga0501075_0139954 3300049591 Bacteria 1844
172 Ga0501075_0201371 3300049591 Bacteria 1518
173 Ga0501075_0362676 3300049591 Bacteria 1104
174 Ga0501076_0184469 3300049592 Bacteria 1701
175 Ga0501077_0088786 3300049593 Bacteria 1959
176 Ga0501199_005080 3300049650 Bacteria 1315
177 Ga0501257_005844 3300049686 Bacteria 2720
178 Ga0501079_0216907 3300049741 Bacteria 1495
179 Ga0501081_0130661 3300049743 Bacteria 1794
180 Ga0501283_024304 3300049779 Bacteria 987
181 Ga0501045_0008757 3300049824 Bacteria 7060
182 nmdc:mga0yw44_221403_c1 3300050492 Bacteria 1254
183 nmdc:mga05p37_17757_c1 3300050507 Bacteria 8585
184 nmdc:mga05p37_7323_c1 3300050507 Bacteria 13024
185 nmdc:mga09592_326_c1 3300050508 Bacteria 34843
186 nmdc:mga09592_377619_c1 3300050508 Bacteria 1226
187 nmdc:mga09592_5369_c1 3300050508 Bacteria 10419
188 nmdc:mga0qj67_1269_c1 3300050509 Bacteria 17711
189 nmdc:mga0qj67_1875_c1 3300050509 Bacteria 14909
190 nmdc:mga0qj67_345586_c1 3300050509 Bacteria 1203
191 nmdc:mga06r32_19784_c1 3300050510 Bacteria 6187
192 nmdc:mga06r32_284509_c1 3300050510 Bacteria 1640
193 nmdc:mga06r32_408200_c1 3300050510 Bacteria 1340
194 nmdc:mga06r32_4276_c1 3300050510 Bacteria 12792
195 nmdc:mga0n895_38603_c1 3300050512 Bacteria 4628
196 nmdc:mga0rr50_16634_c1 3300050513 Bacteria 4892
197 nmdc:mga08x19_24656_c1 3300050514 Bacteria 3742
198 nmdc:mga08x19_34124_c1 3300050514 Bacteria 3215
199 nmdc:mga08x19_60035_c1 3300050514 Bacteria 2463
200 nmdc:mga0a205_4104_c1 3300050515 Bacteria 10248
201 nmdc:mga0a205_418296_c1 3300050515 Unclassified 1202
202 Ga0500610_0056990 3300053079 Bacteria 2039
203 Ga0500660_031386 3300053100 Bacteria 2769
204 Ga0501084_0027681 3300054114 Bacteria 4736
205 Ga0501084_0066906 3300054114 Bacteria 3007
206 Ga0587084_008648 3300059477 Unclassified 1295
207 Ga0501082_0005515 3300060353 Bacteria 10982
208 Ga0501082_0618818 3300060353 Bacteria 948
209 Ga0466962_0001174 3300061719 Bacteria 12065
210 Ga0530510_0289687 3300061734 Bacteria 1224
211 Ga0530510_0379571 3300061734 Bacteria 1064

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300039438 Ga0436360_0392925 Ga0436360_0392925_118_879 239
2 3300060353 Ga0501082_0618818 Ga0501082_0618818_10_789 239
3 3300061734 Ga0530510_0379571 Ga0530510_0379571_261_1040 239
4 3300049591 Ga0501075_0201371 Ga0501075_0201371_11_871 241
5 3300049779 Ga0501283_024304 Ga0501283_024304_47_838 243
6 3300039062 Ga0400483_120971 Ga0400483_120971_1580_2563 247
7 3300042876 Ga0451577_0347625 Ga0451577_0347625_281_1117 249
8 3300044712 Ga0453684_0143231 Ga0453684_0143231_241_1077 249
9 3300005468 Ga0070707_100011365 Ga0070707_1000113656 250
10 3300005468 Ga0070707_100240971 Ga0070707_1002409712 251
11 3300005545 Ga0070695_100043831 Ga0070695_1000438312 251
12 3300013297 Ga0157378_10028513 Ga0157378_100285133 251
13 3300027665 Ga0209983_1008295 Ga0209983_10082952 251
14 3300027717 Ga0209998_10004896 Ga0209998_100048962 251
15 3300031251 Ga0265327_10061703 Ga0265327_100617031 251
16 3300037466 Ga0395898_0007333 Ga0395898_0007333_10092_11060 252
17 3300038443 Ga0395901_0000128 Ga0395901_0000128_81668_82636 252
18 3300031727 Ga0316576_10026600 Ga0316576_100266002 253
19 3300031733 Ga0316577_10006793 Ga0316577_100067933 253
20 3300033541 Ga0316596_1010212 Ga0316596_10102123 253
21 3300036647 Ga0316582_0105388 Ga0316582_0105388_200_1138 253
22 3300036712 Ga0316584_0020062 Ga0316584_0020062_1770_2708 253
23 3300038725 Ga0400484_21200 Ga0400484_21200_265_1188 253
24 3300048913 Ga0496110_0099360 Ga0496110_0099360_1616_2557 253
25 3300044673 Ga0453683_0018512 Ga0453683_0018512_178_1068 254
26 3300044712 Ga0453684_0407525 Ga0453684_0407525_489_1379 254
27 3300005518 Ga0070699_100247714 Ga0070699_1002477142 258
28 3300005536 Ga0070697_100075792 Ga0070697_1000757923 258
29 3300006844 Ga0075428_100004863 Ga0075428_1000048634 258
30 3300006846 Ga0075430_100006383 Ga0075430_1000063834 258
31 3300006847 Ga0075431_100007220 Ga0075431_1000072204 258
32 3300006880 Ga0075429_100026459 Ga0075429_1000264594 258
33 3300009093 Ga0105240_10071682 Ga0105240_100716824 258
34 3300009147 Ga0114129_10006544 Ga0114129_1000654410 258
35 3300050492 nmdc:mga0yw44_221403_c1 nmdc:mga0yw44_221403_c1_195_1178 258
36 3300050507 nmdc:mga05p37_17757_c1 nmdc:mga05p37_17757_c1_3631_4572 258
37 3300050508 nmdc:mga09592_5369_c1 nmdc:mga09592_5369_c1_3633_4574 258
38 3300050509 nmdc:mga0qj67_1875_c1 nmdc:mga0qj67_1875_c1_10319_11260 258
39 3300050510 nmdc:mga06r32_19784_c1 nmdc:mga06r32_19784_c1_3650_4591 258
40 3300037853 Ga0436364_0916436 Ga0436364_0916436_785_1786 259
41 3300005563 Ga0068855_100000355 Ga0068855_10000035539 260
42 3300025949 Ga0207667_10003426 Ga0207667_1000342611 260
43 3300044684 Ga0466966_0000637 Ga0466966_0000637_13216_14184 260
44 3300044694 Ga0466963_0050524 Ga0466963_0050524_170_1138 260
45 3300044719 Ga0466971_0012595 Ga0466971_0012595_957_1925 260
46 3300044842 Ga0466957_0102175 Ga0466957_0102175_56_1024 260
47 3300045836 Ga0466958_0080447 Ga0466958_0080447_468_1436 260
48 3300061719 Ga0466962_0001174 Ga0466962_0001174_5374_6342 260
49 3300013105 Ga0157369_10099394 Ga0157369_100993942 261
50 3300013297 Ga0157378_10058991 Ga0157378_100589913 261
51 3300037418 Ga0395900_0000015 Ga0395900_0000015_60072_61040 261
52 3300039453 Ga0436362_0532154 Ga0436362_0532154_587_1519 261
53 3300039437 Ga0436365_0353221 Ga0436365_0353221_1095_2030 262
54 3300044712 Ga0453684_0040924 Ga0453684_0040924_194_1081 262
55 3300007265 Ga0099794_10009139 Ga0099794_100091393 263
56 3300005329 Ga0070683_100004127 Ga0070683_1000041277 264
57 3300028558 Ga0265326_10001383 Ga0265326_100013836 265
58 3300028653 Ga0265323_10002738 Ga0265323_100027383 265
59 3300028654 Ga0265322_10001731 Ga0265322_100017316 265
60 3300031344 Ga0265316_10004142 Ga0265316_100041422 265
61 3300053100 Ga0500660_031386 Ga0500660_031386_71_973 265
62 3300005471 Ga0070698_100076762 Ga0070698_1000767623 266
63 3300005518 Ga0070699_100018627 Ga0070699_1000186272 266
64 3300005536 Ga0070697_100038398 Ga0070697_1000383983 266
65 3300005937 Ga0081455_10024986 Ga0081455_100249864 266
66 3300005981 Ga0081538_10019958 Ga0081538_100199582 266
67 3300006846 Ga0075430_100212951 Ga0075430_1002129512 266
68 3300006847 Ga0075431_100045783 Ga0075431_1000457833 266
69 3300025918 Ga0207662_10024256 Ga0207662_100242563 266
70 3300025922 Ga0207646_10055240 Ga0207646_100552402 266
71 3300028563 Ga0265319_1005463 Ga0265319_10054633 266
72 3300028577 Ga0265318_10014216 Ga0265318_100142162 266
73 3300042876 Ga0451577_0188011 Ga0451577_0188011_810_1841 266
74 3300049583 Ga0501067_0022508 Ga0501067_0022508_931_1890 266
75 3300049584 Ga0501068_0045434 Ga0501068_0045434_1587_2549 266
76 3300050510 nmdc:mga06r32_4276_c1 nmdc:mga06r32_4276_c1_3301_4230 266
77 3300061734 Ga0530510_0289687 Ga0530510_0289687_210_1169 266
78 iso_pu_bacteria 2515154088 2515495093 266
79 iso_pu_bacteria 2515154129 2515719096 266
80 iso_pu_bacteria 2515154137 2515754952 266
81 iso_pu_bacteria 2515154202 2516083302 266
82 iso_pu_bacteria 2515154203 2516088595 266
83 3300005354 Ga0070675_100298576 Ga0070675_1002985761 267
84 3300005440 Ga0070705_100006681 Ga0070705_1000066815 267
85 3300005445 Ga0070708_100006060 Ga0070708_1000060602 267
86 3300005445 Ga0070708_100028011 Ga0070708_1000280112 267
87 3300005467 Ga0070706_100000554 Ga0070706_10000055410 267
88 3300005467 Ga0070706_100020681 Ga0070706_1000206814 267
89 3300005467 Ga0070706_100075896 Ga0070706_1000758963 267
90 3300005467 Ga0070706_100377757 Ga0070706_1003777572 267
91 3300005468 Ga0070707_100000534 Ga0070707_1000005343 267
92 3300005468 Ga0070707_100065491 Ga0070707_1000654912 267
93 3300005468 Ga0070707_100086414 Ga0070707_1000864143 267
94 3300005471 Ga0070698_100000751 Ga0070698_10000075135 267
95 3300005471 Ga0070698_100030393 Ga0070698_1000303934 267
96 3300005471 Ga0070698_100051104 Ga0070698_1000511042 267
97 3300005471 Ga0070698_100113088 Ga0070698_1001130883 267
98 3300005471 Ga0070698_100169864 Ga0070698_1001698641 267
99 3300005518 Ga0070699_100000889 Ga0070699_10000088921 267
100 3300005518 Ga0070699_100008438 Ga0070699_1000084382 267
101 3300005535 Ga0070684_100159633 Ga0070684_1001596332 267
102 3300005536 Ga0070697_100000841 Ga0070697_1000008418 267
103 3300005536 Ga0070697_100009965 Ga0070697_1000099653 267
104 3300005981 Ga0081538_10000172 Ga0081538_1000017225 267
105 3300006028 Ga0070717_10086939 Ga0070717_100869392 267
106 3300006173 Ga0070716_100071737 Ga0070716_1000717372 267
107 3300006844 Ga0075428_100014921 Ga0075428_1000149216 267
108 3300006844 Ga0075428_100170920 Ga0075428_1001709202 267
109 3300006852 Ga0075433_10034516 Ga0075433_100345162 267
110 3300006871 Ga0075434_100058347 Ga0075434_1000583472 267
111 3300006880 Ga0075429_100002707 Ga0075429_1000027073 267
112 3300006880 Ga0075429_100070551 Ga0075429_1000705513 267
113 3300006880 Ga0075429_100076903 Ga0075429_1000769032 267
114 3300006914 Ga0075436_100055627 Ga0075436_1000556272 267
115 3300007076 Ga0075435_100005451 Ga0075435_1000054512 267
116 3300007076 Ga0075435_100029545 Ga0075435_1000295453 267
117 3300007265 Ga0099794_10147140 Ga0099794_101471402 267
118 3300009147 Ga0114129_10010787 Ga0114129_1001078710 267
119 3300009147 Ga0114129_10119018 Ga0114129_101190182 267
120 3300009148 Ga0105243_10618751 Ga0105243_106187511 267
121 3300009176 Ga0105242_10192634 Ga0105242_101926342 267
122 3300025885 Ga0207653_10005626 Ga0207653_100056264 267
123 3300025910 Ga0207684_10000001 Ga0207684_10000001393 267
124 3300025910 Ga0207684_10002103 Ga0207684_1000210319 267
125 3300025910 Ga0207684_10314569 Ga0207684_103145692 267
126 3300025922 Ga0207646_10000099 Ga0207646_10000099121 267
127 3300025922 Ga0207646_10005437 Ga0207646_1000543713 267
128 3300025922 Ga0207646_10024375 Ga0207646_100243752 267
129 3300025939 Ga0207665_10037657 Ga0207665_100376572 267
130 3300027671 Ga0209588_1000209 Ga0209588_10002093 267
131 3300031727 Ga0316576_10144906 Ga0316576_101449062 267
132 3300031733 Ga0316577_10037816 Ga0316577_100378162 267
133 3300032168 Ga0316593_10013601 Ga0316593_100136012 267
134 3300033541 Ga0316596_1022906 Ga0316596_10229062 267
135 3300036647 Ga0316582_0082338 Ga0316582_0082338_561_1448 267
136 3300036712 Ga0316584_0024505 Ga0316584_0024505_1842_2729 267
137 3300036712 Ga0316584_0099822 Ga0316584_0099822_490_1377 267
138 3300037418 Ga0395900_0100173 Ga0395900_0100173_610_1536 267
139 3300044673 Ga0453683_0100336 Ga0453683_0100336_524_1411 267
140 3300044712 Ga0453684_0000003 Ga0453684_0000003_851715_852602 267
141 3300044712 Ga0453684_0000240 Ga0453684_0000240_160792_161682 267
142 3300044712 Ga0453684_0005763 Ga0453684_0005763_16836_17723 267
143 3300044712 Ga0453684_0033068 Ga0453684_0033068_1835_2725 267
144 3300044712 Ga0453684_0183570 Ga0453684_0183570_1428_2315 267
145 3300044712 Ga0453684_0237830 Ga0453684_0237830_971_1861 267
146 3300044712 Ga0453684_0667921 Ga0453684_0667921_163_1053 267
147 3300045051 Ga0451576_0535652 Ga0451576_0535652_32_922 267
148 3300050507 nmdc:mga05p37_7323_c1 nmdc:mga05p37_7323_c1_10664_11551 267
149 3300050508 nmdc:mga09592_326_c1 nmdc:mga09592_326_c1_22286_23173 267
150 3300050508 nmdc:mga09592_377619_c1 nmdc:mga09592_377619_c1_67_954 267
151 3300050512 nmdc:mga0n895_38603_c1 nmdc:mga0n895_38603_c1_2941_3834 267
152 3300050513 nmdc:mga0rr50_16634_c1 nmdc:mga0rr50_16634_c1_2489_3427 267
153 3300050514 nmdc:mga08x19_24656_c1 nmdc:mga08x19_24656_c1_1243_2181 267
154 3300050514 nmdc:mga08x19_34124_c1 nmdc:mga08x19_34124_c1_1226_2134 267
155 3300050514 nmdc:mga08x19_60035_c1 nmdc:mga08x19_60035_c1_591_1484 267
156 3300050515 nmdc:mga0a205_418296_c1 nmdc:mga0a205_418296_c1_193_1188 267
157 3300059477 Ga0587084_008648 Ga0587084_008648_131_1144 267
158 iso_pu_bacteria 8008485437 8008486863 267
159 iso_pu_bacteria 8025524527 8025526120 267
160 3300046660 Ga0495625_0001757 Ga0495625_0001757_21828_22751 268
161 3300049572 Ga0501036_0087356 Ga0501036_0087356_1640_2521 268
162 3300049574 Ga0501038_0000991 Ga0501038_0000991_14075_14956 268
163 3300049575 Ga0501039_0055778 Ga0501039_0055778_1063_1944 268
164 3300049577 Ga0501041_0034406 Ga0501041_0034406_720_1601 268
165 3300049582 Ga0501048_0031912 Ga0501048_0031912_1889_2770 268
166 3300049587 Ga0501071_0031098 Ga0501071_0031098_748_1629 268
167 3300049590 Ga0501074_0000170 Ga0501074_0000170_19135_20016 268
168 3300049592 Ga0501076_0184469 Ga0501076_0184469_785_1666 268
169 3300049743 Ga0501081_0130661 Ga0501081_0130661_874_1755 268
170 3300049824 Ga0501045_0008757 Ga0501045_0008757_2302_3183 268
171 3300050510 nmdc:mga06r32_284509_c1 nmdc:mga06r32_284509_c1_663_1580 268
172 3300054114 Ga0501084_0027681 Ga0501084_0027681_2095_2976 268
173 3300060353 Ga0501082_0005515 Ga0501082_0005515_8067_8948 268
174 3300005356 Ga0070674_100433437 Ga0070674_1004334372 269
175 3300006846 Ga0075430_100186949 Ga0075430_1001869491 269
176 3300006847 Ga0075431_100456473 Ga0075431_1004564731 269
177 3300006852 Ga0075433_10023240 Ga0075433_100232404 269
178 3300009148 Ga0105243_10124608 Ga0105243_101246082 269
179 3300031733 Ga0316577_10015437 Ga0316577_100154373 269
180 3300031733 Ga0316577_10016226 Ga0316577_100162263 269
181 3300036712 Ga0316584_0065623 Ga0316584_0065623_386_1318 269
182 3300039093 Ga0400489_66722 Ga0400489_66722_1787_2815 269
183 3300041509 Ga0451843_0181588 Ga0451843_0181588_377_1279 269
184 3300046519 Ga0495632_0034119 Ga0495632_0034119_857_1792 269
185 3300048911 Ga0496108_0000067 Ga0496108_0000067_3097_4038 269
186 3300048911 Ga0496108_0564750 Ga0496108_0564750_47_949 269
187 3300049575 Ga0501039_0090631 Ga0501039_0090631_631_1674 269
188 3300049580 Ga0501046_0109567 Ga0501046_0109567_988_2031 269
189 3300049582 Ga0501048_0181578 Ga0501048_0181578_331_1374 269
190 3300049591 Ga0501075_0139954 Ga0501075_0139954_29_955 269
191 3300049591 Ga0501075_0362676 Ga0501075_0362676_66_1046 269
192 3300049593 Ga0501077_0088786 Ga0501077_0088786_130_1173 269
193 3300049650 Ga0501199_005080 Ga0501199_005080_132_1082 269
194 3300049686 Ga0501257_005844 Ga0501257_005844_1132_2082 269
195 3300049741 Ga0501079_0216907 Ga0501079_0216907_87_1130 269
196 3300050509 nmdc:mga0qj67_1269_c1 nmdc:mga0qj67_1269_c1_12661_13602 269
197 3300050510 nmdc:mga06r32_408200_c1 nmdc:mga06r32_408200_c1_263_1204 269
198 3300050515 nmdc:mga0a205_4104_c1 nmdc:mga0a205_4104_c1_5651_6592 269
199 3300053079 Ga0500610_0056990 Ga0500610_0056990_297_1232 269
200 3300054114 Ga0501084_0066906 Ga0501084_0066906_306_1349 269
201 iso_pu_bacteria 2510917030 2511197993 269
202 iso_pu_bacteria 2582581298 2585220683 269
203 iso_pu_bacteria 2585427529 2585548485 269
204 iso_pu_bacteria 2585427530 2585555205 269
205 3300039110 Ga0400487_59448 Ga0400487_59448_2371_3246 270
206 3300046512 Ga0495610_0001005 Ga0495610_0001005_18324_19277 270
207 3300047472 Ga0495686_0040079 Ga0495686_0040079_1881_2834 270
208 iso_pu_bacteria 2582581294 2585200490 270
209 iso_pu_bacteria 2837183177 2837187218 270
210 iso_pu_bacteria 8002745576 8002747638 270
211 3300037312 Ga0395899_0000595 Ga0395899_0000595_10504_11490 271
212 3300037418 Ga0395900_0032955 Ga0395900_0032955_493_1479 271
213 3300037471 Ga0395905_0007705 Ga0395905_0007705_4093_5079 271
214 3300046810 Ga0495660_0040038 Ga0495660_0040038_929_1840 271
215 iso_pu_bacteria 2970540015 2970546742 271
216 iso_pu_bacteria 8004395343 8004397262 271
217 3300005842 Ga0068858_100344718 Ga0068858_1003447182 272
218 3300026023 Ga0207677_10115958 Ga0207677_101159582 272
219 3300026035 Ga0207703_10201755 Ga0207703_102017552 272
220 3300050509 nmdc:mga0qj67_345586_c1 nmdc:mga0qj67_345586_c1_300_1184 272
221 3300002741 JGI25157J39369_1000744 JGI25157J39369_100074417 273
222 3300005456 Ga0070678_100065459 Ga0070678_1000654592 273
223 3300014968 Ga0157379_10502800 Ga0157379_105028002 273
224 3300025250 Ga0209026_1000116 Ga0209026_100011642 273
225 3300025256 Ga0209759_1000153 Ga0209759_100015381 273
226 3300049570 Ga0501033_0076941 Ga0501033_0076941_261_1157 273
227 3300049574 Ga0501038_0378686 Ga0501038_0378686_101_997 273
228 iso_pu_bacteria 8055909800 8055911457 273

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

108

346

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.8814 2 255
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.8679 39 255
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.8599 2 255
8hps-assembly1.cif.gz_A lpqy-sugabc in state 5 0.855 2 255
4tqv-assembly4.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8527 9 255
ID Description Score Start End Superfamily
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9228 40 255 1.10.3720.10
af_P10905_52_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9121 40 255 1.10.3720.10
af_I6XFF3_60_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8912 40 255 1.10.3720.10
af_P0AFL1_11_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8819 10 255 1.10.3720.10
af_P0AFK6_8_259_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8767 8 255 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A8A7VKD7-F1-model_v4 deleted 0.9562 28 255
AF-A0A494YGA8-F1-model_v4 Sugar ABC transporter permease 0.952 9 255 GO:0005886
GO:0055085
AF-Q9HZ49-F1-model_v4 Probable permease of ABC sugar transporter 0.9517 2 255 GO:0005886
GO:0055085
AF-W1KGQ5-F1-model_v4 deleted 0.9516 35 255
AF-A0A656Z381-F1-model_v4 ABC transporter permease 0.9495 49 255 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
82.03 0.74 High
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Predicted Structure (AlphaFold2)

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