F340959

General Info

Members Datasets Scaffolds Average Seq Length
228 158 217 352

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10002719|Ga0157370_100027196
Length 406
Sequence MRKMLRRRHDFCARESCGTPALGRSSQNRHHLSAAGPPERPFTFALMDVLMNHSSAGIKTLLVTGGAGFIGANFVLQAVADGLRVINLDKLTYAGNPDTLASLNGNERHVFVHGDIGDRALVSTLLAEHRPAAIVNFAAESHVDRSIDGPAEFVQTNVVGTLGLLECARDHWRNLEGATRDAFRFLHVSTDEVYGSLGAEGKFTETTPYAPNSPYSASKAASDHLVRAFQHTYGLPTLTTNCSNNYGPYQFPEKLIPLVIQKALVGEPLPVYGDGLNIRDWLFVGDHCSAIRRVLEAGRVGETYNVGGNAERENITVVRTICALLDQRQPLPDGRPRESLITYVKDRPGHDRRYAIDSSKLQNELAWRPTHTFETGIAATVDWYLANQPWSRRVLDGSYQMERLGS

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
3 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
4 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
5 2738543009 Luteibacter sp. OK325 Isolate Unclassified
6 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
7 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
8 2884411467 Dyella sp. AD56 Isolate Rhizosphere
9 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
10 2919404418 Luteibacter sp. 3190 Isolate Unclassified
11 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
12 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
13 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
14 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
15 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
16 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
17 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
18 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
19 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
20 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
21 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
22 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
23 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
24 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
25 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
55 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
56 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
121 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
122 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.74
Metatranscriptomes 0.44
Isolates 4.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.68
Nodule 0
Rhizoplane 1.75
Rhizosphere 59.65
Stem 0
Stem Tuber 0
Unclassified 14.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10002818 3300001990 Bacteria 6157
2 JGI24743J22301_10000064 3300001991 Bacteria 10042
3 JGI25156J39149_1005997 3300002705 Bacteria 3396
4 JGI25156J39149_1020116 3300002705 Bacteria 1184
5 JGI25162J39368_1000072 3300002737 Bacteria 122550
6 JGI25162J39368_1000398 3300002737 Bacteria 36350
7 JGI25162J39368_1000403 3300002737 Bacteria 35711
8 JGI25162J39368_1000450 3300002737 Bacteria 32392
9 JGI25157J39369_1000143 3300002741 Bacteria 60517
10 JGI25157J39369_1000210 3300002741 Bacteria 48631
11 JGI25163J39215_1000608 3300002771 Bacteria 9915
12 JGI25164J39214_1000115 3300002772 Bacteria 77050
13 JGI25164J39214_1000276 3300002772 Bacteria 37292
14 JGI25164J39214_1000360 3300002772 Bacteria 27828
15 JGI25164J39214_1000479 3300002772 Bacteria 19723
16 JGI25164J39214_1003364 3300002772 Bacteria 2053
17 JGI25165J46597_1000063 3300003214 Bacteria 205051
18 JGI25165J46597_1000419 3300003214 Bacteria 43972
19 JGI25165J46597_1001372 3300003214 Bacteria 13423
20 Ga0055538_1002145 3300003751 Bacteria 3092
21 Ga0055539_1000391 3300003752 Bacteria 17723
22 Ga0055533_1000338 3300003756 Bacteria 20556
23 Ga0055533_1000369 3300003756 Bacteria 18631
24 Ga0055535_1000068 3300003761 Bacteria 115329
25 Ga0055542_1000069 3300003762 Bacteria 148278
26 Ga0055542_1000090 3300003762 Bacteria 122550
27 Ga0055529_1000084 3300003763 Bacteria 143720
28 Ga0055536_1009804 3300003781 Bacteria 3902
29 Ga0055531_10004683 3300003794 Bacteria 8197
30 Ga0058863_11881142 3300004799 Bacteria 1222
31 Ga0070666_10000010 3300005335 Bacteria 264789
32 Ga0070660_100091283 3300005339 Bacteria 2402
33 Ga0070714_100000393 3300005435 Bacteria 32554
34 Ga0070714_100000605 3300005435 Bacteria 25685
35 Ga0070663_100136348 3300005455 Bacteria 1869
36 Ga0070681_10179371 3300005458 Bacteria 2039
37 Ga0070685_10000832 3300005466 Bacteria 16796
38 Ga0070699_100136919 3300005518 Bacteria 2160
39 Ga0068853_100027321 3300005539 Bacteria 4794
40 Ga0070696_100006208 3300005546 Bacteria 7994
41 Ga0070693_100005217 3300005547 Bacteria 6217
42 Ga0068855_100000696 3300005563 Bacteria 41094
43 Ga0068857_100292911 3300005577 Bacteria 1499
44 Ga0068854_100000282 3300005578 Bacteria 34044
45 Ga0075436_100057257 3300006914 Bacteria 2692
46 Ga0105240_10009334 3300009093 Bacteria 13905
47 Ga0105240_10456108 3300009093 Bacteria 1429
48 Ga0105237_10401315 3300009545 Bacteria 1376
49 Ga0105238_10071685 3300009551 Bacteria 3462
50 Ga0157371_10297567 3300013102 Bacteria 1168
51 Ga0157370_10002719 3300013104 Bacteria 21150
52 Ga0157370_10004280 3300013104 Bacteria 16440
53 Ga0157369_10562425 3300013105 Bacteria 1178
54 Ga0163162_10000193 3300013306 Bacteria 56063
55 Ga0157372_10198487 3300013307 Bacteria 2324
56 Ga0182008_10000209 3300014497 Bacteria 46251
57 Ga0182007_10001346 3300015262 Bacteria 13262
58 Ga0182007_10005029 3300015262 Bacteria 5871
59 Ga0182007_10030165 3300015262 Bacteria 1855
60 Ga0182005_1000064 3300015265 Bacteria 95976
61 Ga0183369_1003 3300015685 Bacteria 726443
62 Ga0183368_1002 3300015687 Bacteria 1865598
63 Ga0209760_100294 3300025207 Bacteria 17371
64 Ga0209784_100042 3300025224 Bacteria 218070
65 Ga0209566_102332 3300025225 Bacteria 3628
66 Ga0209674_100033 3300025226 Bacteria 423450
67 Ga0209674_100221 3300025226 Bacteria 52721
68 Ga0209674_100441 3300025226 Bacteria 19236
69 Ga0209674_101207 3300025226 Bacteria 7354
70 Ga0207427_100049 3300025231 Bacteria 237504
71 Ga0207427_100078 3300025231 Bacteria 147526
72 Ga0207427_100096 3300025231 Bacteria 123398
73 Ga0207427_100372 3300025231 Bacteria 27308
74 Ga0209437_100074 3300025233 Bacteria 300858
75 Ga0209437_100083 3300025233 Bacteria 256005
76 Ga0209437_100090 3300025233 Bacteria 247138
77 Ga0209437_100113 3300025233 Bacteria 211240
78 Ga0209437_100691 3300025233 Bacteria 17825
79 Ga0209258_100136 3300025242 Bacteria 169078
80 Ga0209258_101400 3300025242 Bacteria 8612
81 Ga0209258_101792 3300025242 Bacteria 6574
82 Ga0209646_1002742 3300025246 Bacteria 3742
83 Ga0209026_1000072 3300025250 Bacteria 205447
84 Ga0209026_1000129 3300025250 Bacteria 121927
85 Ga0209677_100662 3300025253 Bacteria 17982
86 Ga0209148_1000005 3300025254 Bacteria 1806504
87 Ga0209148_1000036 3300025254 Bacteria 530505
88 Ga0209148_1000791 3300025254 Bacteria 23435
89 Ga0209759_1000831 3300025256 Bacteria 24394
90 Ga0209759_1001656 3300025256 Bacteria 11716
91 Ga0209759_1002615 3300025256 Bacteria 7765
92 Ga0209233_1000040 3300025261 Bacteria 530395
93 Ga0209233_1000075 3300025261 Bacteria 356837
94 Ga0209233_1000077 3300025261 Bacteria 349570
95 Ga0209455_1000071 3300025272 Bacteria 300858
96 Ga0209676_1015224 3300025292 Bacteria 2841
97 Ga0209025_1001373 3300025294 Bacteria 32662
98 Ga0209256_1010555 3300025299 Bacteria 3844
99 Ga0209257_1000307 3300025304 Bacteria 105179
100 Ga0207680_10000002 3300025903 Bacteria 1018646
101 Ga0207647_10012093 3300025904 Bacteria 6023
102 Ga0207707_10131406 3300025912 Bacteria 2190
103 Ga0207695_10046519 3300025913 Bacteria 4599
104 Ga0207693_10143226 3300025915 Bacteria 1879
105 Ga0207649_10146301 3300025920 Bacteria 1622
106 Ga0207694_10000850 3300025924 Bacteria 27165
107 Ga0207650_10021916 3300025925 Bacteria 4521
108 Ga0207664_10000553 3300025929 Bacteria 26494
109 Ga0207664_10000624 3300025929 Bacteria 24530
110 Ga0207690_10000375 3300025932 Bacteria 29631
111 Ga0207667_10000344 3300025949 Bacteria 63681
112 Ga0207667_10004963 3300025949 Bacteria 16254
113 Ga0207668_10033959 3300025972 Bacteria 3383
114 Ga0207640_10000190 3300025981 Bacteria 43737
115 Ga0207678_10143254 3300026067 Bacteria 2040
116 Ga0265318_10058925 3300028577 Bacteria 1432
117 Ga0307516_10091359 3300031730 Bacteria 2872
118 Ga0307412_10163226 3300031911 Bacteria 1658
119 Ga0307416_100283402 3300032002 Bacteria 1635
120 Ga0307510_10000059 3300033180 Bacteria 84839
121 Ga0395899_0001125 3300037312 Bacteria 23866
122 Ga0395899_0001466 3300037312 Bacteria 20107
123 Ga0395899_0001644 3300037312 Bacteria 18658
124 Ga0395899_0182765 3300037312 Bacteria 1471
125 Ga0395900_0002927 3300037418 Bacteria 18590
126 Ga0395900_0004445 3300037418 Bacteria 14854
127 Ga0395900_0024057 3300037418 Bacteria 6233
128 Ga0395900_0506818 3300037418 Bacteria 1156
129 Ga0395898_0002066 3300037466 Bacteria 25003
130 Ga0395898_0002627 3300037466 Bacteria 20893
131 Ga0395898_0002725 3300037466 Bacteria 20379
132 Ga0395898_0013479 3300037466 Bacteria 8416
133 Ga0395901_0000259 3300038443 Bacteria 66203
134 Ga0395901_0001429 3300038443 Bacteria 24902
135 Ga0395901_0074402 3300038443 Bacteria 3544
136 Ga0395901_0379361 3300038443 Bacteria 1455
137 Ga0439432_026758 3300042006 Bacteria 1887
138 Ga0439449_0002996 3300042007 Bacteria 6587
139 Ga0439459_0002709 3300042438 Bacteria 2755
140 Ga0451577_0130328 3300042876 Bacteria 2255
141 Ga0466969_0033988 3300044656 Bacteria 2585
142 Ga0466972_0000647 3300044658 Bacteria 16793
143 Ga0466972_0002963 3300044658 Bacteria 8405
144 Ga0466982_0000007 3300044672 Bacteria 250854
145 Ga0466965_0000764 3300044683 Bacteria 12107
146 Ga0466965_0007999 3300044683 Bacteria 4878
147 Ga0466966_0001588 3300044684 Bacteria 14607
148 Ga0466964_0000680 3300044706 Bacteria 10952
149 Ga0466971_0000196 3300044719 Bacteria 23181
150 Ga0466960_0131500 3300044901 Bacteria 1321
151 Ga0495638_0000106 3300046460 Bacteria 133921
152 Ga0495638_0000144 3300046460 Bacteria 113604
153 Ga0495638_0000479 3300046460 Bacteria 47958
154 Ga0495650_0000134 3300046471 Bacteria 173331
155 Ga0495650_0023551 3300046471 Bacteria 2929
156 Ga0495607_0041222 3300046501 Bacteria 2744
157 Ga0495583_0000833 3300046506 Bacteria 37749
158 Ga0495606_0001290 3300046507 Bacteria 34699
159 Ga0495616_0000617 3300046513 Bacteria 26769
160 Ga0495632_0000008 3300046519 Bacteria 294056
161 Ga0495632_0000241 3300046519 Bacteria 54558
162 Ga0495648_0001366 3300046524 Bacteria 24119
163 Ga0495622_0060007 3300046557 Bacteria 1761
164 Ga0495622_0103342 3300046557 Bacteria 1305
165 Ga0495611_0000023 3300046648 Bacteria 120553
166 Ga0495611_0002701 3300046648 Bacteria 7998
167 Ga0495625_0001652 3300046660 Bacteria 26150
168 Ga0495625_0010606 3300046660 Bacteria 7603
169 Ga0495659_0001273 3300046664 Bacteria 8700
170 Ga0495670_0009105 3300046691 Bacteria 4882
171 Ga0495671_0000390 3300046692 Bacteria 36237
172 Ga0495589_0000547 3300046794 Bacteria 26112
173 Ga0495660_0000321 3300046810 Bacteria 42518
174 Ga0495686_0000608 3300047472 Bacteria 49564
175 Ga0496100_0104064 3300048903 Bacteria 1961
176 Ga0496101_0022509 3300048904 Bacteria 4339
177 Ga0496104_0092578 3300048907 Bacteria 2890
178 Ga0496107_0130906 3300048910 Bacteria 1852
179 Ga0496116_0027022 3300048919 Bacteria 4183
180 Ga0496117_0003170 3300048920 Bacteria 19550
181 Ga0496118_0000646 3300048921 Bacteria 57111
182 Ga0496119_0000113 3300048922 Bacteria 114626
183 Ga0496120_0000450 3300048923 Bacteria 65290
184 Ga0496121_0001863 3300048924 Bacteria 33851
185 Ga0496121_0006661 3300048924 Bacteria 14212
186 Ga0496122_0033714 3300048925 Bacteria 4205
187 Ga0496123_0009110 3300048926 Bacteria 8985
188 Ga0496124_0000313 3300048927 Bacteria 89891
189 Ga0496124_0000314 3300048927 Bacteria 89797
190 Ga0496126_0004079 3300048929 Bacteria 17716
191 Ga0495682_0000341 3300049460 Bacteria 34546
192 Ga0501031_0017309 3300049568 Bacteria 4682
193 Ga0501032_0000535 3300049569 Bacteria 30889
194 Ga0501032_0042745 3300049569 Bacteria 3073
195 Ga0501033_0003923 3300049570 Bacteria 12070
196 Ga0501033_0076414 3300049570 Bacteria 2458
197 Ga0501036_0014992 3300049572 Bacteria 6466
198 Ga0501037_0011941 3300049573 Bacteria 6397
199 Ga0501038_0018304 3300049574 Bacteria 6323
200 Ga0501039_0016923 3300049575 Bacteria 5588
201 Ga0501042_0005136 3300049578 Bacteria 8401
202 Ga0501043_0012626 3300049579 Bacteria 6605
203 Ga0501043_0026742 3300049579 Bacteria 4526
204 Ga0501046_0008233 3300049580 Bacteria 9105
205 Ga0501046_0068011 3300049580 Bacteria 2773
206 Ga0501047_0020802 3300049581 Bacteria 6302
207 Ga0501047_0156004 3300049581 Bacteria 2156
208 Ga0501048_0003807 3300049582 Bacteria 11512
209 Ga0501048_0196848 3300049582 Bacteria 1428
210 Ga0501069_0009063 3300049585 Bacteria 5252
211 Ga0501035_0003761 3300049822 Bacteria 14463
212 Ga0501035_0055280 3300049822 Bacteria 3544
213 Ga0501044_0042530 3300049823 Bacteria 4724
214 Ga0501045_0254119 3300049824 Bacteria 1308
215 nmdc:mga08x19_50399_c1 3300050514 Bacteria 2672
216 Ga0466962_0000036 3300061719 Bacteria 60241
217 Ga0466962_0001724 3300061719 Bacteria 10272

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300033180 Ga0307510_10000059 Ga0307510_1000005915 328
2 3300046664 Ga0495659_0001273 Ga0495659_0001273_5845_6846 330
3 3300042876 Ga0451577_0130328 Ga0451577_0130328_654_1694 331
4 3300006914 Ga0075436_100057257 Ga0075436_1000572574 334
5 3300050514 nmdc:mga08x19_50399_c1 nmdc:mga08x19_50399_c1_1165_2178 334
6 3300037418 Ga0395900_0506818 Ga0395900_0506818_81_1130 336
7 3300038443 Ga0395901_0074402 Ga0395901_0074402_2135_3184 336
8 3300042006 Ga0439432_026758 Ga0439432_026758_90_1145 336
9 3300042007 Ga0439449_0002996 Ga0439449_0002996_1844_2899 336
10 3300005518 Ga0070699_100136919 Ga0070699_1001369192 338
11 3300013105 Ga0157369_10562425 Ga0157369_105624251 338
12 3300002705 JGI25156J39149_1020116 JGI25156J39149_10201161 339
13 3300025225 Ga0209566_102332 Ga0209566_1023322 339
14 3300025256 Ga0209759_1001656 Ga0209759_10016562 339
15 3300005339 Ga0070660_100091283 Ga0070660_1000912832 341
16 3300005458 Ga0070681_10179371 Ga0070681_101793712 341
17 3300009551 Ga0105238_10071685 Ga0105238_100716852 341
18 3300047472 Ga0495686_0000608 Ga0495686_0000608_30822_31871 341
19 3300004799 Ga0058863_11881142 Ga0058863_118811421 344
20 3300031730 Ga0307516_10091359 Ga0307516_100913591 344
21 3300009093 Ga0105240_10456108 Ga0105240_104561082 345
22 iso_pu_bacteria 2593339238 2595447283 345
23 iso_pu_bacteria 2593339239 2595450065 345
24 iso_pu_bacteria 2643221562 2643831104 345
25 iso_pu_bacteria 2738543009 2739227156 345
26 iso_pu_bacteria 2842914999 2842918320 345
27 iso_pu_bacteria 2884338543 2884339427 345
28 iso_pu_bacteria 2884411467 2884416052 345
29 iso_pu_bacteria 2895395659 2895396289 345
30 3300025915 Ga0207693_10143226 Ga0207693_101432262 346
31 3300046507 Ga0495606_0001290 Ga0495606_0001290_8930_9973 347
32 3300046660 Ga0495625_0010606 Ga0495625_0010606_1767_2810 347
33 3300001991 JGI24743J22301_10000064 JGI24743J22301_1000006411 348
34 3300025226 Ga0209674_101207 Ga0209674_1012072 348
35 3300028577 Ga0265318_10058925 Ga0265318_100589252 348
36 3300044719 Ga0466971_0000196 Ga0466971_0000196_805_1872 348
37 3300046519 Ga0495632_0000008 Ga0495632_0000008_149432_150478 348
38 3300049568 Ga0501031_0017309 Ga0501031_0017309_2762_3826 348
39 3300049569 Ga0501032_0000535 Ga0501032_0000535_13018_14082 348
40 3300049570 Ga0501033_0003923 Ga0501033_0003923_8621_9685 348
41 3300049572 Ga0501036_0014992 Ga0501036_0014992_4979_6043 348
42 3300049573 Ga0501037_0011941 Ga0501037_0011941_2839_3903 348
43 3300049574 Ga0501038_0018304 Ga0501038_0018304_2839_3903 348
44 3300049575 Ga0501039_0016923 Ga0501039_0016923_91_1155 348
45 3300049578 Ga0501042_0005136 Ga0501042_0005136_4587_5651 348
46 3300049579 Ga0501043_0026742 Ga0501043_0026742_891_1955 348
47 3300049580 Ga0501046_0008233 Ga0501046_0008233_4979_6043 348
48 3300049581 Ga0501047_0020802 Ga0501047_0020802_2488_3552 348
49 3300049582 Ga0501048_0003807 Ga0501048_0003807_8315_9379 348
50 3300049822 Ga0501035_0003761 Ga0501035_0003761_4779_5843 348
51 3300049823 Ga0501044_0042530 Ga0501044_0042530_2105_3169 348
52 3300049824 Ga0501045_0254119 Ga0501045_0254119_207_1271 348
53 3300061719 Ga0466962_0000036 Ga0466962_0000036_2988_4055 348
54 3300001990 JGI24737J22298_10002818 JGI24737J22298_100028186 349
55 3300002705 JGI25156J39149_1005997 JGI25156J39149_10059972 349
56 3300002737 JGI25162J39368_1000072 JGI25162J39368_100007282 349
57 3300002737 JGI25162J39368_1000398 JGI25162J39368_100039810 349
58 3300002737 JGI25162J39368_1000403 JGI25162J39368_100040321 349
59 3300002737 JGI25162J39368_1000450 JGI25162J39368_10004505 349
60 3300002741 JGI25157J39369_1000143 JGI25157J39369_10001437 349
61 3300002741 JGI25157J39369_1000210 JGI25157J39369_100021035 349
62 3300002771 JGI25163J39215_1000608 JGI25163J39215_10006087 349
63 3300002772 JGI25164J39214_1000115 JGI25164J39214_100011523 349
64 3300002772 JGI25164J39214_1000276 JGI25164J39214_10002765 349
65 3300002772 JGI25164J39214_1000360 JGI25164J39214_100036015 349
66 3300002772 JGI25164J39214_1000479 JGI25164J39214_10004794 349
67 3300002772 JGI25164J39214_1003364 JGI25164J39214_10033642 349
68 3300003214 JGI25165J46597_1000063 JGI25165J46597_1000063111 349
69 3300003214 JGI25165J46597_1000419 JGI25165J46597_100041921 349
70 3300003214 JGI25165J46597_1001372 JGI25165J46597_10013721 349
71 3300003751 Ga0055538_1002145 Ga0055538_10021453 349
72 3300003752 Ga0055539_1000391 Ga0055539_10003915 349
73 3300003756 Ga0055533_1000338 Ga0055533_10003389 349
74 3300003756 Ga0055533_1000369 Ga0055533_10003695 349
75 3300003761 Ga0055535_1000068 Ga0055535_100006882 349
76 3300003762 Ga0055542_1000069 Ga0055542_100006931 349
77 3300003762 Ga0055542_1000090 Ga0055542_100009082 349
78 3300003763 Ga0055529_1000084 Ga0055529_100008482 349
79 3300003781 Ga0055536_1009804 Ga0055536_10098046 349
80 3300003794 Ga0055531_10004683 Ga0055531_100046836 349
81 3300005335 Ga0070666_10000010 Ga0070666_10000010143 349
82 3300005435 Ga0070714_100000393 Ga0070714_10000039322 349
83 3300005435 Ga0070714_100000605 Ga0070714_10000060515 349
84 3300005455 Ga0070663_100136348 Ga0070663_1001363482 349
85 3300005466 Ga0070685_10000832 Ga0070685_100008328 349
86 3300005539 Ga0068853_100027321 Ga0068853_1000273212 349
87 3300005546 Ga0070696_100006208 Ga0070696_1000062086 349
88 3300005547 Ga0070693_100005217 Ga0070693_1000052173 349
89 3300005563 Ga0068855_100000696 Ga0068855_10000069610 349
90 3300005577 Ga0068857_100292911 Ga0068857_1002929112 349
91 3300005578 Ga0068854_100000282 Ga0068854_10000028218 349
92 3300009093 Ga0105240_10009334 Ga0105240_100093342 349
93 3300009545 Ga0105237_10401315 Ga0105237_104013152 349
94 3300013102 Ga0157371_10297567 Ga0157371_102975671 349
95 3300013104 Ga0157370_10002719 Ga0157370_100027196 349
96 3300013104 Ga0157370_10004280 Ga0157370_1000428011 349
97 3300013306 Ga0163162_10000193 Ga0163162_1000019312 349
98 3300013307 Ga0157372_10198487 Ga0157372_101984872 349
99 3300014497 Ga0182008_10000209 Ga0182008_1000020929 349
100 3300015262 Ga0182007_10001346 Ga0182007_100013467 349
101 3300015262 Ga0182007_10005029 Ga0182007_100050295 349
102 3300015262 Ga0182007_10030165 Ga0182007_100301652 349
103 3300015265 Ga0182005_1000064 Ga0182005_100006437 349
104 3300015685 Ga0183369_1003 Ga0183369_1003174 349
105 3300015687 Ga0183368_1002 Ga0183368_1002837 349
106 3300025207 Ga0209760_100294 Ga0209760_1002947 349
107 3300025224 Ga0209784_100042 Ga0209784_100042115 349
108 3300025226 Ga0209674_100033 Ga0209674_100033278 349
109 3300025226 Ga0209674_100221 Ga0209674_10022112 349
110 3300025226 Ga0209674_100441 Ga0209674_1004417 349
111 3300025231 Ga0207427_100049 Ga0207427_10004999 349
112 3300025231 Ga0207427_100078 Ga0207427_100078109 349
113 3300025231 Ga0207427_100096 Ga0207427_10009680 349
114 3300025231 Ga0207427_100372 Ga0207427_1003729 349
115 3300025233 Ga0209437_100074 Ga0209437_100074188 349
116 3300025233 Ga0209437_100083 Ga0209437_100083143 349
117 3300025233 Ga0209437_100090 Ga0209437_10009088 349
118 3300025233 Ga0209437_100113 Ga0209437_10011333 349
119 3300025233 Ga0209437_100691 Ga0209437_1006915 349
120 3300025242 Ga0209258_100136 Ga0209258_10013626 349
121 3300025242 Ga0209258_101400 Ga0209258_1014002 349
122 3300025242 Ga0209258_101792 Ga0209258_1017921 349
123 3300025246 Ga0209646_1002742 Ga0209646_10027423 349
124 3300025250 Ga0209026_1000072 Ga0209026_100007280 349
125 3300025250 Ga0209026_1000129 Ga0209026_100012981 349
126 3300025253 Ga0209677_100662 Ga0209677_1006625 349
127 3300025254 Ga0209148_1000005 Ga0209148_10000051440 349
128 3300025254 Ga0209148_1000036 Ga0209148_1000036189 349
129 3300025254 Ga0209148_1000791 Ga0209148_100079110 349
130 3300025256 Ga0209759_1000831 Ga0209759_10008313 349
131 3300025256 Ga0209759_1002615 Ga0209759_10026154 349
132 3300025261 Ga0209233_1000040 Ga0209233_1000040187 349
133 3300025261 Ga0209233_1000075 Ga0209233_1000075181 349
134 3300025261 Ga0209233_1000077 Ga0209233_1000077185 349
135 3300025272 Ga0209455_1000071 Ga0209455_1000071188 349
136 3300025292 Ga0209676_1015224 Ga0209676_10152243 349
137 3300025294 Ga0209025_1001373 Ga0209025_100137312 349
138 3300025299 Ga0209256_1010555 Ga0209256_10105552 349
139 3300025304 Ga0209257_1000307 Ga0209257_100030784 349
140 3300025903 Ga0207680_10000002 Ga0207680_10000002248 349
141 3300025904 Ga0207647_10012093 Ga0207647_100120936 349
142 3300025912 Ga0207707_10131406 Ga0207707_101314062 349
143 3300025913 Ga0207695_10046519 Ga0207695_100465194 349
144 3300025920 Ga0207649_10146301 Ga0207649_101463012 349
145 3300025924 Ga0207694_10000850 Ga0207694_1000085017 349
146 3300025925 Ga0207650_10021916 Ga0207650_100219164 349
147 3300025929 Ga0207664_10000553 Ga0207664_100005536 349
148 3300025929 Ga0207664_10000624 Ga0207664_100006248 349
149 3300025932 Ga0207690_10000375 Ga0207690_100003757 349
150 3300025949 Ga0207667_10000344 Ga0207667_1000034426 349
151 3300025949 Ga0207667_10004963 Ga0207667_1000496314 349
152 3300025972 Ga0207668_10033959 Ga0207668_100339592 349
153 3300025981 Ga0207640_10000190 Ga0207640_1000019026 349
154 3300026067 Ga0207678_10143254 Ga0207678_101432542 349
155 3300031911 Ga0307412_10163226 Ga0307412_101632262 349
156 3300032002 Ga0307416_100283402 Ga0307416_1002834022 349
157 3300037312 Ga0395899_0001125 Ga0395899_0001125_1699_2748 349
158 3300037312 Ga0395899_0001466 Ga0395899_0001466_18777_19826 349
159 3300037312 Ga0395899_0001644 Ga0395899_0001644_16552_17601 349
160 3300037312 Ga0395899_0182765 Ga0395899_0182765_174_1244 349
161 3300037418 Ga0395900_0002927 Ga0395900_0002927_990_2039 349
162 3300037418 Ga0395900_0004445 Ga0395900_0004445_7590_8639 349
163 3300037418 Ga0395900_0024057 Ga0395900_0024057_3286_4335 349
164 3300037466 Ga0395898_0002066 Ga0395898_0002066_21198_22247 349
165 3300037466 Ga0395898_0002627 Ga0395898_0002627_2227_3276 349
166 3300037466 Ga0395898_0002725 Ga0395898_0002725_16552_17601 349
167 3300037466 Ga0395898_0013479 Ga0395898_0013479_3343_4392 349
168 3300038443 Ga0395901_0000259 Ga0395901_0000259_7410_8480 349
169 3300038443 Ga0395901_0001429 Ga0395901_0001429_16552_17601 349
170 3300038443 Ga0395901_0379361 Ga0395901_0379361_342_1412 349
171 3300042438 Ga0439459_0002709 Ga0439459_0002709_205_1254 349
172 3300044656 Ga0466969_0033988 Ga0466969_0033988_1174_2223 349
173 3300044658 Ga0466972_0000647 Ga0466972_0000647_11599_12681 349
174 3300044658 Ga0466972_0002963 Ga0466972_0002963_1989_3059 349
175 3300044672 Ga0466982_0000007 Ga0466982_0000007_200995_202065 349
176 3300044683 Ga0466965_0000764 Ga0466965_0000764_6918_8000 349
177 3300044683 Ga0466965_0007999 Ga0466965_0007999_1738_2808 349
178 3300044684 Ga0466966_0001588 Ga0466966_0001588_9790_10839 349
179 3300044706 Ga0466964_0000680 Ga0466964_0000680_2608_3678 349
180 3300044901 Ga0466960_0131500 Ga0466960_0131500_205_1275 349
181 3300046460 Ga0495638_0000106 Ga0495638_0000106_114501_115550 349
182 3300046460 Ga0495638_0000144 Ga0495638_0000144_22339_23388 349
183 3300046460 Ga0495638_0000479 Ga0495638_0000479_22663_23712 349
184 3300046471 Ga0495650_0000134 Ga0495650_0000134_98614_99663 349
185 3300046471 Ga0495650_0023551 Ga0495650_0023551_756_1805 349
186 3300046501 Ga0495607_0041222 Ga0495607_0041222_1576_2625 349
187 3300046506 Ga0495583_0000833 Ga0495583_0000833_31390_32439 349
188 3300046513 Ga0495616_0000617 Ga0495616_0000617_15240_16289 349
189 3300046519 Ga0495632_0000241 Ga0495632_0000241_38305_39354 349
190 3300046524 Ga0495648_0001366 Ga0495648_0001366_5589_6638 349
191 3300046557 Ga0495622_0060007 Ga0495622_0060007_248_1297 349
192 3300046557 Ga0495622_0103342 Ga0495622_0103342_228_1277 349
193 3300046648 Ga0495611_0000023 Ga0495611_0000023_71903_72952 349
194 3300046648 Ga0495611_0002701 Ga0495611_0002701_5272_6321 349
195 3300046660 Ga0495625_0001652 Ga0495625_0001652_14652_15701 349
196 3300046691 Ga0495670_0009105 Ga0495670_0009105_83_1132 349
197 3300046692 Ga0495671_0000390 Ga0495671_0000390_14693_15742 349
198 3300046794 Ga0495589_0000547 Ga0495589_0000547_14614_15663 349
199 3300046810 Ga0495660_0000321 Ga0495660_0000321_26551_27600 349
200 3300048903 Ga0496100_0104064 Ga0496100_0104064_130_1179 349
201 3300048904 Ga0496101_0022509 Ga0496101_0022509_2920_3969 349
202 3300048907 Ga0496104_0092578 Ga0496104_0092578_686_1735 349
203 3300048910 Ga0496107_0130906 Ga0496107_0130906_60_1109 349
204 3300048919 Ga0496116_0027022 Ga0496116_0027022_1939_2988 349
205 3300048920 Ga0496117_0003170 Ga0496117_0003170_10716_11765 349
206 3300048921 Ga0496118_0000646 Ga0496118_0000646_9095_10144 349
207 3300048922 Ga0496119_0000113 Ga0496119_0000113_67910_68959 349
208 3300048923 Ga0496120_0000450 Ga0496120_0000450_17109_18158 349
209 3300048924 Ga0496121_0001863 Ga0496121_0001863_20014_21063 349
210 3300048924 Ga0496121_0006661 Ga0496121_0006661_6260_7309 349
211 3300048925 Ga0496122_0033714 Ga0496122_0033714_2290_3339 349
212 3300048926 Ga0496123_0009110 Ga0496123_0009110_172_1221 349
213 3300048927 Ga0496124_0000313 Ga0496124_0000313_16890_17939 349
214 3300048927 Ga0496124_0000314 Ga0496124_0000314_70621_71670 349
215 3300048929 Ga0496126_0004079 Ga0496126_0004079_6341_7390 349
216 3300049460 Ga0495682_0000341 Ga0495682_0000341_12211_13260 349
217 3300049569 Ga0501032_0042745 Ga0501032_0042745_502_1551 349
218 3300049570 Ga0501033_0076414 Ga0501033_0076414_1061_2110 349
219 3300049579 Ga0501043_0012626 Ga0501043_0012626_303_1352 349
220 3300049580 Ga0501046_0068011 Ga0501046_0068011_674_1744 349
221 3300049581 Ga0501047_0156004 Ga0501047_0156004_396_1445 349
222 3300049582 Ga0501048_0196848 Ga0501048_0196848_183_1232 349
223 3300049585 Ga0501069_0009063 Ga0501069_0009063_3422_4483 349
224 3300049822 Ga0501035_0055280 Ga0501035_0055280_737_1786 349
225 3300061719 Ga0466962_0001724 Ga0466962_0001724_295_1365 349
226 iso_pu_bacteria 2537561836 2538833770 349
227 iso_pu_bacteria 2919404418 2919406606 349
228 iso_pu_bacteria 2939611941 2939614798 349

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

61

307

0.96

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

62

380

0.91

PF04321

RmlD_sub_bind

RmlD substrate binding domain

59

236

0.88

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

61

200

0.8

PF07993

NAD_binding_4

Male sterility protein

63

250

0.78

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

62

302

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9721 1 337
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9709 1 337
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.966 1 337
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9648 1 337
1bxk-assembly1.cif.gz_B dtdp-glucose 4,6-dehydratase from e. coli 0.9494 1 342
ID Description Score Start End Superfamily
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9484 2 313 3.40.50.720
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9439 2 313 3.40.50.720
1bxkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9374 1 317 3.40.50.720
1bxkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9337 1 317 3.40.50.720
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9126 2 249 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X1PPC2-F1-model_v4 dTDP-glucose 46-dehydratase (EC 4.2.1.46) 0.9977 181 271 GO:0008460
AF-A0A662ZRW6-F1-model_v4 deleted 0.995 171 329
AF-M5CIQ8-F1-model_v4 deleted 0.9792 1 344
AF-A0A3C1VQ02-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9786 158 343
AF-A0A444QZH8-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9755 153 320

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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