F340945

General Info

Members Datasets Scaffolds Average Seq Length
228 107 456 314

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10195120|Ga0105249_101951202
Length 348
Sequence LSRFHIVPHNDLNQKLKIRPAIISNGLVNYETSGNPKNFGGVLVDLSKHAFFEGKIVPLADAKLSIATHGFLYGTSVFGGMRSYWNEEQKRLFVFRPYDHFRRLLQSARMMAMQTSYDEESLIQLTLDVLRTDNWQQDIYMRPTFYKADLGIGVKLHDLKDEFCMFVMAYEPYVKNDTNAHVTVSSWRRIDDNVIPARGKVAGAYANSALIKTDANRAGFDEALVLDNNGHVSEGSAMNFFMMRDGNLVTPPVTDNILEGITRKSVIELARNELGINVVERSIDRTELFIAEEMFMTGTAAQITAVTKVDHRPVGTGVMGPITTKLRMMYEDILRGKNKKYEHWNVVV

Samples

Sample ID Description Type Environment
1 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
63 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
66 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
73 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
74 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
75 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
76 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
104 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.44
Rhizosphere 93.42
Stem 0
Stem Tuber 0
Unclassified 22.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105249_10195120 3300009553 Bacteria 1978
2 MBSR1b_contig_11198357 2162886012 Bacteria 1229
3 Ga0065707_10000482 3300005295 Bacteria 48953
4 Ga0065707_10002903 3300005295 Bacteria 4417
5 Ga0065707_10086323 3300005295 Bacteria 5532
6 Ga0065707_10098824 3300005295 Bacteria 3050
7 Ga0070667_100011660 3300005367 Bacteria 7267
8 Ga0070700_100094498 3300005441 Bacteria 1958
9 Ga0070694_100382053 3300005444 Bacteria 1098
10 Ga0070708_100161257 3300005445 Unclassified 2089
11 Ga0070685_10213190 3300005466 Bacteria 1261
12 Ga0070706_100155870 3300005467 Unclassified 2132
13 Ga0070698_100394184 3300005471 Bacteria 1317
14 Ga0070699_100008781 3300005518 Bacteria 8758
15 Ga0070699_100017019 3300005518 Bacteria 6243
16 Ga0070699_100115701 3300005518 Bacteria 2356
17 Ga0070699_100461334 3300005518 Unclassified 1152
18 Ga0070697_100037142 3300005536 Unclassified 3935
19 Ga0070665_100087148 3300005548 Bacteria 3127
20 Ga0070665_100185606 3300005548 Bacteria 2080
21 Ga0070704_100030765 3300005549 Bacteria 3601
22 Ga0070704_100059039 3300005549 Bacteria 2735
23 Ga0070704_100323802 3300005549 Archaea 1292
24 Ga0070702_100146153 3300005615 Bacteria 1512
25 Ga0068859_100000941 3300005617 Bacteria 29788
26 Ga0068859_100020554 3300005617 Bacteria 6625
27 Ga0068859_100600859 3300005617 Unclassified 1193
28 Ga0068864_100267306 3300005618 Bacteria 1592
29 Ga0068864_100608700 3300005618 Unclassified 1061
30 Ga0068861_100094413 3300005719 Unclassified 2367
31 Ga0068863_100006000 3300005841 Bacteria 11913
32 Ga0068860_100002685 3300005843 Bacteria 18512
33 Ga0068860_100698786 3300005843 Bacteria 1024
34 Ga0068862_100004117 3300005844 Bacteria 12319
35 Ga0068862_100165903 3300005844 Bacteria 1974
36 Ga0068862_100168795 3300005844 Bacteria 1958
37 Ga0081539_10002072 3300005985 Bacteria 30021
38 Ga0081539_10048766 3300005985 Bacteria 2407
39 Ga0097621_100077592 3300006237 Bacteria 2758
40 Ga0068871_100138682 3300006358 Bacteria 2066
41 Ga0075428_100249137 3300006844 Unclassified 1915
42 Ga0075431_100092317 3300006847 Unclassified 3124
43 Ga0075434_100006992 3300006871 Bacteria 10402
44 Ga0075429_100010594 3300006880 Bacteria 7976
45 Ga0075429_100083714 3300006880 Bacteria 2780
46 Ga0075436_100086683 3300006914 Bacteria 2175
47 Ga0097620_100000941 3300006931 Bacteria 29788
48 Ga0097620_100020553 3300006931 Bacteria 6625
49 Ga0097620_100600855 3300006931 Unclassified 1193
50 Ga0075435_100158657 3300007076 Unclassified 1905
51 Ga0075435_100415495 3300007076 Bacteria 1158
52 Ga0111539_10007950 3300009094 Bacteria 13524
53 Ga0111539_10010367 3300009094 Bacteria 11732
54 Ga0111539_10014427 3300009094 Bacteria 9862
55 Ga0111539_10130455 3300009094 Unclassified 2943
56 Ga0111539_10255858 3300009094 Bacteria 2039
57 Ga0114129_10003592 3300009147 Bacteria 21816
58 Ga0114129_10018553 3300009147 Bacteria 9905
59 Ga0114129_10042407 3300009147 Bacteria 6408
60 Ga0114129_10055117 3300009147 Bacteria 5572
61 Ga0114129_10065480 3300009147 Bacteria 5072
62 Ga0114129_10194512 3300009147 Bacteria 2751
63 Ga0114129_10235940 3300009147 Unclassified 2461
64 Ga0105243_10059331 3300009148 Bacteria 3053
65 Ga0105243_10193656 3300009148 Bacteria 1777
66 Ga0105248_10004439 3300009177 Bacteria 15538
67 Ga0105238_10322450 3300009551 Bacteria 1531
68 Ga0105249_10055020 3300009553 Unclassified 3639
69 Ga0105246_10110942 3300011119 Bacteria 2015
70 Ga0163162_10024105 3300013306 Bacteria 6005
71 Ga0157375_10006322 3300013308 Bacteria 10320
72 Ga0163163_10005778 3300014325 Bacteria 10749
73 Ga0163163_10139071 3300014325 Bacteria 2470
74 Ga0157380_10349914 3300014326 Bacteria 1382
75 Ga0157377_10120079 3300014745 Unclassified 1592
76 Ga0157379_10009725 3300014968 Bacteria 8376
77 Ga0157379_10098651 3300014968 Unclassified 2623
78 Ga0157379_10159373 3300014968 Bacteria 2037
79 Ga0213872_10000389 3300021361 Bacteria 36530
80 Ga0213876_10003572 3300021384 Bacteria 8845
81 Ga0213876_10105136 3300021384 Bacteria 1498
82 Ga0213875_10006014 3300021388 Bacteria 6426
83 Ga0213875_10009312 3300021388 Bacteria 4983
84 Ga0213875_10060361 3300021388 Unclassified 1774
85 Ga0207653_10071797 3300025885 Bacteria 1184
86 Ga0207646_10392518 3300025922 Bacteria 1254
87 Ga0207659_10007678 3300025926 Bacteria 6654
88 Ga0207659_10012975 3300025926 Bacteria 5323
89 Ga0207659_10016322 3300025926 Bacteria 4830
90 Ga0207709_10169862 3300025935 Bacteria 1529
91 Ga0207709_10348698 3300025935 Bacteria 1117
92 Ga0207711_10537133 3300025941 Bacteria 1090
93 Ga0207651_10187131 3300025960 Bacteria 1648
94 Ga0207651_10190123 3300025960 Bacteria 1637
95 Ga0207658_10075044 3300025986 Bacteria 2571
96 Ga0207703_10299806 3300026035 Bacteria 1465
97 Ga0207708_10022475 3300026075 Bacteria 4762
98 Ga0207641_10003326 3300026088 Bacteria 14310
99 Ga0207676_10288490 3300026095 Bacteria 1493
100 Ga0207675_100081524 3300026118 Unclassified 3033
101 Ga0207675_100174153 3300026118 Bacteria 2058
102 Ga0207675_100596975 3300026118 Bacteria 1107
103 Ga0207428_10167543 3300027907 Bacteria 1665
104 Ga0268266_10161755 3300028379 Unclassified 2026
105 Ga0268265_10011694 3300028380 Bacteria 5936
106 Ga0265334_10014592 3300028573 Bacteria 3274
107 Ga0265323_10024706 3300028653 Bacteria 2282
108 Ga0265320_10039792 3300031240 Bacteria 2348
109 Ga0316575_10002511 3300031665 Bacteria 6179
110 Ga0316579_10003290 3300031691 Bacteria 6273
111 Ga0316579_10030034 3300031691 Unclassified 2481
112 Ga0316576_10044330 3300031727 Bacteria 3213
113 Ga0316576_10053731 3300031727 Unclassified 2936
114 Ga0316576_10089759 3300031727 Bacteria 2289
115 Ga0316576_10305417 3300031727 Unclassified 1189
116 Ga0316578_10007280 3300031728 Bacteria 5536
117 Ga0316577_10000018 3300031733 Bacteria 36008
118 Ga0316577_10001520 3300031733 Bacteria 11001
119 Ga0316577_10013285 3300031733 Bacteria 4498
120 Ga0316577_10018973 3300031733 Bacteria 3805
121 Ga0316577_10048687 3300031733 Unclassified 2367
122 Ga0307413_10230999 3300031824 Bacteria 1359
123 Ga0307415_100244459 3300032126 Unclassified 1454
124 Ga0316585_10017582 3300032137 Bacteria 2163
125 Ga0316574_0063137 3300035398 Bacteria 2329
126 Ga0316582_0018813 3300036647 Unclassified 4029
127 Ga0316582_0035810 3300036647 Unclassified 3068
128 Ga0316582_0051882 3300036647 Bacteria 2604
129 Ga0316582_0155873 3300036647 Bacteria 1545
130 Ga0316582_0182598 3300036647 Bacteria 1428
131 Ga0316582_0282740 3300036647 Unclassified 1139
132 Ga0316582_0324175 3300036647 Unclassified 1059
133 Ga0316584_0000904 3300036712 Bacteria 16905
134 Ga0316584_0001164 3300036712 Bacteria 15516
135 Ga0316584_0002960 3300036712 Bacteria 10921
136 Ga0316584_0036025 3300036712 Unclassified 3672
137 Ga0316584_0087449 3300036712 Bacteria 2333
138 Ga0316584_0130125 3300036712 Unclassified 1880
139 Ga0316581_0008029 3300037588 Unclassified 2855
140 Ga0316581_0012292 3300037588 Bacteria 2409
141 Ga0436364_0447827 3300037853 Unclassified 2392
142 Ga0436364_0955118 3300037853 Unclassified 1675
143 Ga0436364_1121119 3300037853 Bacteria 34853
144 Ga0436364_1294156 3300037853 Bacteria 4915
145 Ga0436364_1514689 3300037853 Bacteria 4541
146 Ga0400488_35215 3300038741 Bacteria 1225
147 Ga0436365_1059276 3300039437 Bacteria 1866
148 Ga0436365_1607053 3300039437 Bacteria 47115
149 Ga0436361_0327528 3300039447 Bacteria 75180
150 Ga0436363_0317052 3300039450 Bacteria 2543
151 Ga0436362_0005354 3300039453 Bacteria 2583
152 Ga0436362_1001233 3300039453 Unclassified 1568
153 Ga0451577_0002086 3300042876 Bacteria 24596
154 Ga0451577_0086394 3300042876 Bacteria 2798
155 Ga0451577_0113149 3300042876 Unclassified 2429
156 Ga0451577_0173843 3300042876 Bacteria 1941
157 Ga0451577_0333625 3300042876 Bacteria 1375
158 Ga0451577_0449070 3300042876 Bacteria 1171
159 Ga0451577_0581432 3300042876 Unclassified 1017
160 Ga0453683_0000523 3300044673 Bacteria 43101
161 Ga0453683_0013077 3300044673 Bacteria 5428
162 Ga0453683_0029954 3300044673 Unclassified 3440
163 Ga0453683_0081680 3300044673 Bacteria 2024
164 Ga0453684_0000012 3300044712 Bacteria 1062512
165 Ga0453684_0000269 3300044712 Bacteria 223826
166 Ga0453684_0000456 3300044712 Bacteria 164108
167 Ga0453684_0001795 3300044712 Bacteria 56980
168 Ga0453684_0010204 3300044712 Bacteria 16107
169 Ga0453684_0020987 3300044712 Bacteria 9795
170 Ga0453684_0028055 3300044712 Bacteria 8048
171 Ga0453684_0075388 3300044712 Bacteria 4240
172 Ga0453684_0115909 3300044712 Bacteria 3246
173 Ga0453684_0124536 3300044712 Bacteria 3105
174 Ga0453684_0125531 3300044712 Bacteria 3090
175 Ga0453684_0144786 3300044712 Unclassified 2832
176 Ga0453684_0189447 3300044712 Bacteria 2407
177 Ga0451576_0000853 3300045051 Bacteria 59154
178 Ga0451576_0001929 3300045051 Bacteria 33173
179 Ga0451576_0012447 3300045051 Bacteria 9554
180 Ga0451576_0020057 3300045051 Bacteria 7287
181 Ga0451576_0040489 3300045051 Bacteria 4931
182 Ga0451576_0041057 3300045051 Bacteria 4892
183 Ga0451576_0111613 3300045051 Bacteria 2845
184 Ga0451576_0230072 3300045051 Bacteria 1936
185 Ga0466958_0057940 3300045836 Bacteria 2355
186 Ga0496108_0386660 3300048911 Unclassified 1222
187 Ga0501036_0022868 3300049572 Bacteria 5263
188 Ga0501036_0211011 3300049572 Unclassified 1632
189 Ga0501042_0220030 3300049578 Bacteria 1369
190 Ga0501048_0046049 3300049582 Bacteria 3114
191 Ga0501071_0013808 3300049587 Bacteria 5512
192 Ga0501075_0009966 3300049591 Bacteria 6661
193 Ga0501076_0027678 3300049592 Bacteria 4396
194 Ga0501076_0160505 3300049592 Unclassified 1831
195 Ga0501076_0411448 3300049592 Unclassified 1112
196 Ga0501079_0043555 3300049741 Bacteria 3465
197 Ga0501080_0040758 3300049742 Bacteria 4331
198 Ga0501080_0167528 3300049742 Unclassified 2027
199 Ga0501081_0182356 3300049743 Bacteria 1519
200 nmdc:mga05p37_151632_c1 3300050507 Bacteria 2834
201 nmdc:mga05p37_169991_c1 3300050507 Unclassified 2659
202 nmdc:mga05p37_220601_c1 3300050507 Unclassified 2288
203 nmdc:mga05p37_22952_c1 3300050507 Bacteria 7568
204 nmdc:mga05p37_42350_c2 3300050507 Unclassified 4500
205 nmdc:mga05p37_51880_c1 3300050507 Bacteria 5043
206 nmdc:mga05p37_5546_c1 3300050507 Bacteria 14826
207 nmdc:mga05p37_82668_c1 3300050507 Bacteria 3957
208 nmdc:mga05p37_86149_c1 3300050507 Bacteria 3872
209 nmdc:mga05p37_93_c2 3300050507 Bacteria 38704
210 nmdc:mga09592_48023_c1 3300050508 Bacteria 3598
211 nmdc:mga09592_734_c1 3300050508 Bacteria 25253
212 nmdc:mga09592_82556_c1 3300050508 Bacteria 2738
213 nmdc:mga0qj67_211392_c1 3300050509 Bacteria 1575
214 nmdc:mga06r32_341285_c1 3300050510 Bacteria 1482
215 nmdc:mga06r32_553790_c1 3300050510 Unclassified 1124
216 nmdc:mga06r32_78397_c1 3300050510 Unclassified 3211
217 nmdc:mga08y16_135992_c1 3300050511 Bacteria 2554
218 nmdc:mga08y16_26450_c1 3300050511 Bacteria 6118
219 nmdc:mga08y16_61444_c1 3300050511 Bacteria 3923
220 nmdc:mga08y16_90716_c1 3300050511 Unclassified 3186
221 nmdc:mga0n895_31451_c1 3300050512 Bacteria 5082
222 nmdc:mga0n895_425985_c1 3300050512 Unclassified 1341
223 nmdc:mga0n895_714_c1 3300050512 Bacteria 23369
224 nmdc:mga08x19_51283_c1 3300050514 Bacteria 2650
225 nmdc:mga0a205_245_c1 3300050515 Bacteria 38677
226 Ga0501084_0388493 3300054114 Bacteria 1179
227 Ga0501084_0524347 3300054114 Unclassified 1001
228 Ga0501082_0093433 3300060353 Bacteria 2599
229 Ga0105249_10195120
230 MBSR1b_contig_11198357
231 Ga0065707_10000482
232 Ga0065707_10002903
233 Ga0065707_10086323
234 Ga0065707_10098824
235 Ga0070667_100011660
236 Ga0070700_100094498
237 Ga0070694_100382053
238 Ga0070708_100161257
239 Ga0070685_10213190
240 Ga0070706_100155870
241 Ga0070698_100394184
242 Ga0070699_100008781
243 Ga0070699_100017019
244 Ga0070699_100115701
245 Ga0070699_100461334
246 Ga0070697_100037142
247 Ga0070665_100087148
248 Ga0070665_100185606
249 Ga0070704_100030765
250 Ga0070704_100059039
251 Ga0070704_100323802
252 Ga0070702_100146153
253 Ga0068859_100000941
254 Ga0068859_100020554
255 Ga0068859_100600859
256 Ga0068864_100267306
257 Ga0068864_100608700
258 Ga0068861_100094413
259 Ga0068863_100006000
260 Ga0068860_100002685
261 Ga0068860_100698786
262 Ga0068862_100004117
263 Ga0068862_100165903
264 Ga0068862_100168795
265 Ga0081539_10002072
266 Ga0081539_10048766
267 Ga0097621_100077592
268 Ga0068871_100138682
269 Ga0075428_100249137
270 Ga0075431_100092317
271 Ga0075434_100006992
272 Ga0075429_100010594
273 Ga0075429_100083714
274 Ga0075436_100086683
275 Ga0097620_100000941
276 Ga0097620_100020553
277 Ga0097620_100600855
278 Ga0075435_100158657
279 Ga0075435_100415495
280 Ga0111539_10007950
281 Ga0111539_10010367
282 Ga0111539_10014427
283 Ga0111539_10130455
284 Ga0111539_10255858
285 Ga0114129_10003592
286 Ga0114129_10018553
287 Ga0114129_10042407
288 Ga0114129_10055117
289 Ga0114129_10065480
290 Ga0114129_10194512
291 Ga0114129_10235940
292 Ga0105243_10059331
293 Ga0105243_10193656
294 Ga0105248_10004439
295 Ga0105238_10322450
296 Ga0105249_10055020
297 Ga0105246_10110942
298 Ga0163162_10024105
299 Ga0157375_10006322
300 Ga0163163_10005778
301 Ga0163163_10139071
302 Ga0157380_10349914
303 Ga0157377_10120079
304 Ga0157379_10009725
305 Ga0157379_10098651
306 Ga0157379_10159373
307 Ga0213872_10000389
308 Ga0213876_10003572
309 Ga0213876_10105136
310 Ga0213875_10006014
311 Ga0213875_10009312
312 Ga0213875_10060361
313 Ga0207653_10071797
314 Ga0207646_10392518
315 Ga0207659_10007678
316 Ga0207659_10012975
317 Ga0207659_10016322
318 Ga0207709_10169862
319 Ga0207709_10348698
320 Ga0207711_10537133
321 Ga0207651_10187131
322 Ga0207651_10190123
323 Ga0207658_10075044
324 Ga0207703_10299806
325 Ga0207708_10022475
326 Ga0207641_10003326
327 Ga0207676_10288490
328 Ga0207675_100081524
329 Ga0207675_100174153
330 Ga0207675_100596975
331 Ga0207428_10167543
332 Ga0268266_10161755
333 Ga0268265_10011694
334 Ga0265334_10014592
335 Ga0265323_10024706
336 Ga0265320_10039792
337 Ga0316575_10002511
338 Ga0316579_10003290
339 Ga0316579_10030034
340 Ga0316576_10044330
341 Ga0316576_10053731
342 Ga0316576_10089759
343 Ga0316576_10305417
344 Ga0316578_10007280
345 Ga0316577_10000018
346 Ga0316577_10001520
347 Ga0316577_10013285
348 Ga0316577_10018973
349 Ga0316577_10048687
350 Ga0307413_10230999
351 Ga0307415_100244459
352 Ga0316585_10017582
353 Ga0316574_0063137
354 Ga0316582_0018813
355 Ga0316582_0035810
356 Ga0316582_0051882
357 Ga0316582_0155873
358 Ga0316582_0182598
359 Ga0316582_0282740
360 Ga0316582_0324175
361 Ga0316584_0000904
362 Ga0316584_0001164
363 Ga0316584_0002960
364 Ga0316584_0036025
365 Ga0316584_0087449
366 Ga0316584_0130125
367 Ga0316581_0008029
368 Ga0316581_0012292
369 Ga0436364_0447827
370 Ga0436364_0955118
371 Ga0436364_1121119
372 Ga0436364_1294156
373 Ga0436364_1514689
374 Ga0400488_35215
375 Ga0436365_1059276
376 Ga0436365_1607053
377 Ga0436361_0327528
378 Ga0436363_0317052
379 Ga0436362_0005354
380 Ga0436362_1001233
381 Ga0451577_0002086
382 Ga0451577_0086394
383 Ga0451577_0113149
384 Ga0451577_0173843
385 Ga0451577_0333625
386 Ga0451577_0449070
387 Ga0451577_0581432
388 Ga0453683_0000523
389 Ga0453683_0013077
390 Ga0453683_0029954
391 Ga0453683_0081680
392 Ga0453684_0000012
393 Ga0453684_0000269
394 Ga0453684_0000456
395 Ga0453684_0001795
396 Ga0453684_0010204
397 Ga0453684_0020987
398 Ga0453684_0028055
399 Ga0453684_0075388
400 Ga0453684_0115909
401 Ga0453684_0124536
402 Ga0453684_0125531
403 Ga0453684_0144786
404 Ga0453684_0189447
405 Ga0451576_0000853
406 Ga0451576_0001929
407 Ga0451576_0012447
408 Ga0451576_0020057
409 Ga0451576_0040489
410 Ga0451576_0041057
411 Ga0451576_0111613
412 Ga0451576_0230072
413 Ga0466958_0057940
414 Ga0496108_0386660
415 Ga0501036_0022868
416 Ga0501036_0211011
417 Ga0501042_0220030
418 Ga0501048_0046049
419 Ga0501071_0013808
420 Ga0501075_0009966
421 Ga0501076_0027678
422 Ga0501076_0160505
423 Ga0501076_0411448
424 Ga0501079_0043555
425 Ga0501080_0040758
426 Ga0501080_0167528
427 Ga0501081_0182356
428 nmdc:mga05p37_151632_c1
429 nmdc:mga05p37_169991_c1
430 nmdc:mga05p37_220601_c1
431 nmdc:mga05p37_22952_c1
432 nmdc:mga05p37_42350_c2
433 nmdc:mga05p37_51880_c1
434 nmdc:mga05p37_5546_c1
435 nmdc:mga05p37_82668_c1
436 nmdc:mga05p37_86149_c1
437 nmdc:mga05p37_93_c2
438 nmdc:mga09592_48023_c1
439 nmdc:mga09592_734_c1
440 nmdc:mga09592_82556_c1
441 nmdc:mga0qj67_211392_c1
442 nmdc:mga06r32_341285_c1
443 nmdc:mga06r32_553790_c1
444 nmdc:mga06r32_78397_c1
445 nmdc:mga08y16_135992_c1
446 nmdc:mga08y16_26450_c1
447 nmdc:mga08y16_61444_c1
448 nmdc:mga08y16_90716_c1
449 nmdc:mga0n895_31451_c1
450 nmdc:mga0n895_425985_c1
451 nmdc:mga0n895_714_c1
452 nmdc:mga08x19_51283_c1
453 nmdc:mga0a205_245_c1
454 Ga0501084_0388493
455 Ga0501084_0524347
456 Ga0501082_0093433

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01063

Aminotran_4

Amino-transferase class IV

76

309

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6thq-assembly1.cif.gz_A crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline 0.9574 5 305
3u0g-assembly2.cif.gz_B crystal structure of branched-chain amino acid aminotransferase from burkholderia pseudomallei 0.9457 2 303
6thq-assembly1.cif.gz_A crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline 0.9449 5 305
1wrv-assembly1.cif.gz_C crystal structure of t.th.hb8 branched-chain amino acid aminotransferase 0.9397 1 304
3u0g-assembly2.cif.gz_A crystal structure of branched-chain amino acid aminotransferase from burkholderia pseudomallei 0.9387 1 303
ID Description Score Start End Superfamily
6h65B02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9475 133 292 3.20.10.10
3u0gF02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9425 134 292 3.20.10.10
6gkrB02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9313 130 293 3.20.10.10
af_P0AB80_137_302_3.30.470.10 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.9255 134 297 3.30.470.10
5ce8C01 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.923 5 127 3.30.470.10
ID Description Score Start End GO Terms
AF-X1LVN0-F1-model_v4 Branched-chain amino acid aminotransferase 0.9887 189 305 GO:0003824
GO:0046394
AF-A0A2N0QKI3-F1-model_v4 D-aminoacid aminotransferase-like PLP-dependent enzyme 0.987 167 305 GO:0008483
GO:0046394
AF-A0A352UJ79-F1-model_v4 Branched chain amino acid aminotransferase 0.9844 193 302 GO:0008483
GO:0046394
AF-A0A532D543-F1-model_v4 Branched chain amino acid aminotransferase (EC 2.6.1.42) 0.977 166 300 GO:0005829
GO:0008652
GO:0009082
GO:0052655
GO:0052656
AF-A0A7J2JZR1-F1-model_v4 Branched chain amino acid aminotransferase (EC 2.6.1.42) 0.9756 159 300 GO:0004084
GO:0008652
GO:0009082

Map