F340771

General Info

Members Datasets Scaffolds Average Seq Length
228 176 456 277

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100006110|Ga0070665_1000061103
Length 302
Sequence MVHALVTMQRTESKRNRPMTEVNRRSLAGRTLIISGGSRGIGEAIAVRAARDGANIALIAKTASPHPKLPGTVYSAAKAIEAEGGNALPIVGDVRDDQAVEAAVAAAVEQFGGIDIVVNNASALDITHTEQIDMKKYDLMQDINARGAFLLSKVAIPHLRKSSNAHILTLSPPITLENKHFERIGTAYTISKFAMTLVTIGLAAELSRDAIAVNSLWPRTTIDTAAVRNILGKELVARSRSATIMSDAAHLILTSTFHDGTGRCHIDDEILSSAGLSDFAAYQNGLNDSELELDFWMEAATR

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
89 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
98 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
107 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
153 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 2547132424 Nocardia nova SH22a Isolate Unclassified
156 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
157 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
158 2643221575 Microbacterium sp. Root61 Isolate Unclassified
159 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
160 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
161 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
162 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
163 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
164 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
165 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
166 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
167 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
168 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
169 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
170 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
171 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
172 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
173 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
174 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
175 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
176 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.35
Metatranscriptomes 0
Isolates 9.65

Biome Distribution

Category Percentage (%)
Aerial Root 0.44
Bulb 0
Endosphere 2.19
Nodule 0
Rhizoplane 6.14
Rhizosphere 77.19
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100006110 3300005548 Bacteria 12315
2 rootH2_10321439 3300003320 Bacteria 1335
3 Ga0065712_10127417 3300005290 Bacteria 1590
4 Ga0065707_10081888 3300005295 Bacteria 31190
5 Ga0068869_100100719 3300005334 Bacteria 2184
6 Ga0070682_100029264 3300005337 Bacteria 3316
7 Ga0068868_100001460 3300005338 Bacteria 16305
8 Ga0070661_100212297 3300005344 Bacteria 1482
9 Ga0070661_100268303 3300005344 Bacteria 1321
10 Ga0070668_100041221 3300005347 Bacteria 3537
11 Ga0070675_100085709 3300005354 Bacteria 2632
12 Ga0070659_100023090 3300005366 Bacteria 4755
13 Ga0070659_100486962 3300005366 Bacteria 1050
14 Ga0070714_100055058 3300005435 Bacteria 3399
15 Ga0070714_100083527 3300005435 Bacteria 2785
16 Ga0070713_100133670 3300005436 Bacteria 2190
17 Ga0070713_100362688 3300005436 Bacteria 1347
18 Ga0070700_100170222 3300005441 Bacteria 1508
19 Ga0070708_100062162 3300005445 Bacteria 3338
20 Ga0070708_100464971 3300005445 Bacteria 1193
21 Ga0070685_10140645 3300005466 Bacteria 1519
22 Ga0070706_100044203 3300005467 Bacteria 4115
23 Ga0070706_100331806 3300005467 Bacteria 1418
24 Ga0070706_100366450 3300005467 Bacteria 1342
25 Ga0070707_100000462 3300005468 Bacteria 40188
26 Ga0070707_100059627 3300005468 Bacteria 3660
27 Ga0070707_100061460 3300005468 Bacteria 3602
28 Ga0070698_100011679 3300005471 Bacteria 9315
29 Ga0070698_100091409 3300005471 Bacteria 3026
30 Ga0070698_100374450 3300005471 Bacteria 1356
31 Ga0070698_100597941 3300005471 Bacteria 1043
32 Ga0070699_100001443 3300005518 Bacteria 21833
33 Ga0070699_100064748 3300005518 Bacteria 3171
34 Ga0070697_100074557 3300005536 Bacteria 2788
35 Ga0068853_100049811 3300005539 Bacteria 3601
36 Ga0068853_100409776 3300005539 Bacteria 1270
37 Ga0070664_100070486 3300005564 Bacteria 2993
38 Ga0068854_100287552 3300005578 Bacteria 1326
39 Ga0070702_100016214 3300005615 Bacteria 3820
40 Ga0068852_100085401 3300005616 Bacteria 2811
41 Ga0068864_100034709 3300005618 Bacteria 4291
42 Ga0068861_100004975 3300005719 Bacteria 8956
43 Ga0068861_100208433 3300005719 Bacteria 1645
44 Ga0068851_10038249 3300005834 Bacteria 2406
45 Ga0068858_100098806 3300005842 Bacteria 2721
46 Ga0068862_100196829 3300005844 Bacteria 1816
47 Ga0081455_10158600 3300005937 Bacteria 1737
48 Ga0081538_10000504 3300005981 Bacteria 43759
49 Ga0070717_10023073 3300006028 Bacteria 4925
50 Ga0070717_10381184 3300006028 Bacteria 1264
51 Ga0075363_100090141 3300006048 Bacteria 1687
52 Ga0075367_10001432 3300006178 Bacteria 10237
53 Ga0075428_100024703 3300006844 Bacteria 6650
54 Ga0075428_100038602 3300006844 Bacteria 5255
55 Ga0075428_100628621 3300006844 Bacteria 1146
56 Ga0075430_100035799 3300006846 Bacteria 4210
57 Ga0075431_100018699 3300006847 Bacteria 7060
58 Ga0075431_100030176 3300006847 Bacteria 5584
59 Ga0075433_10398365 3300006852 Bacteria 1214
60 Ga0075434_100071652 3300006871 Bacteria 3457
61 Ga0075429_100090722 3300006880 Bacteria 2665
62 Ga0075429_100125000 3300006880 Bacteria 2249
63 Ga0068865_100307549 3300006881 Bacteria 1271
64 Ga0099794_10031842 3300007265 Bacteria 2472
65 Ga0111539_10088563 3300009094 Bacteria 3637
66 Ga0111539_10319363 3300009094 Bacteria 1807
67 Ga0105245_10437795 3300009098 Bacteria 1313
68 Ga0105247_10050601 3300009101 Bacteria 2557
69 Ga0105247_10227946 3300009101 Bacteria 1264
70 Ga0114129_10001330 3300009147 Bacteria 33129
71 Ga0114129_10004246 3300009147 Bacteria 20242
72 Ga0114129_10799383 3300009147 Bacteria 1203
73 Ga0105242_10484636 3300009176 Bacteria 1173
74 Ga0105249_10250563 3300009553 Bacteria 1756
75 Ga0105249_10281978 3300009553 Bacteria 1660
76 Ga0157369_10031191 3300013105 Bacteria 5873
77 Ga0157369_10469757 3300013105 Bacteria 1302
78 Ga0163162_10589641 3300013306 Bacteria 1238
79 Ga0163162_10621437 3300013306 Bacteria 1205
80 Ga0157372_10507747 3300013307 Bacteria 1406
81 Ga0157372_10619099 3300013307 Bacteria 1262
82 Ga0157375_10208639 3300013308 Bacteria 2110
83 Ga0157377_10004153 3300014745 Bacteria 6616
84 Ga0157376_10275027 3300014969 Bacteria 1584
85 Ga0207688_10018569 3300025901 Bacteria 3782
86 Ga0207688_10093026 3300025901 Bacteria 1733
87 Ga0207647_10099771 3300025904 Bacteria 1724
88 Ga0207643_10103704 3300025908 Bacteria 1670
89 Ga0207684_10000051 3300025910 Bacteria 230737
90 Ga0207684_10069383 3300025910 Bacteria 2995
91 Ga0207684_10149893 3300025910 Bacteria 2007
92 Ga0207693_10087764 3300025915 Bacteria 2437
93 Ga0207646_10000164 3300025922 Bacteria 89825
94 Ga0207650_10115555 3300025925 Unclassified 2083
95 Ga0207659_10155350 3300025926 Bacteria 1791
96 Ga0207700_10053255 3300025928 Bacteria 3031
97 Ga0207664_10002896 3300025929 Bacteria 11408
98 Ga0207664_10071792 3300025929 Bacteria 2790
99 Ga0207644_10121628 3300025931 Bacteria 1988
100 Ga0207706_10058380 3300025933 Bacteria 3398
101 Ga0207706_10312332 3300025933 Bacteria 1368
102 Ga0207670_10051477 3300025936 Bacteria 2765
103 Ga0207670_10412243 3300025936 Bacteria 1082
104 Ga0207689_10080700 3300025942 Bacteria 2674
105 Ga0207712_10008057 3300025961 Bacteria 6667
106 Ga0207668_10047663 3300025972 Bacteria 2936
107 Ga0207668_10153738 3300025972 Bacteria 1784
108 Ga0207677_10326793 3300026023 Bacteria 1277
109 Ga0207703_10027854 3300026035 Bacteria 4450
110 Ga0207639_10130347 3300026041 Bacteria 2081
111 Ga0207678_10005173 3300026067 Bacteria 11688
112 Ga0207678_10137025 3300026067 Bacteria 2088
113 Ga0207708_10058467 3300026075 Bacteria 2942
114 Ga0207708_10147153 3300026075 Bacteria 1852
115 Ga0207648_10381478 3300026089 Bacteria 1274
116 Ga0207674_10229234 3300026116 Bacteria 1805
117 Ga0207675_100004585 3300026118 Bacteria 13320
118 Ga0207675_100121912 3300026118 Bacteria 2468
119 Ga0207698_10065469 3300026142 Bacteria 2854
120 Ga0268266_10003202 3300028379 Bacteria 16558
121 Ga0268265_10361049 3300028380 Bacteria 1330
122 Ga0307515_10018851 3300028794 Bacteria 12458
123 Ga0316576_10025446 3300031727 Bacteria 4143
124 Ga0307405_10055114 3300031731 Bacteria 2487
125 Ga0307413_10007989 3300031824 Bacteria 4959
126 Ga0307518_10001260 3300031838 Bacteria 19022
127 Ga0316584_0020215 3300036712 Bacteria 4824
128 Ga0395899_0041247 3300037312 Bacteria 3449
129 Ga0395899_0288982 3300037312 Bacteria 1113
130 Ga0395900_0029493 3300037418 Bacteria 5627
131 Ga0395898_0030750 3300037466 Bacteria 5371
132 Ga0395898_0090630 3300037466 Bacteria 2942
133 Ga0395905_0629618 3300037471 Bacteria 975
134 Ga0395901_0015997 3300038443 Bacteria 7644
135 Ga0395901_0138379 3300038443 Bacteria 2559
136 Ga0439465_0004354 3300041413 Bacteria 4590
137 Ga0451793_0393584 3300041452 Bacteria 4608
138 Ga0451837_1362785 3300041494 Bacteria 4970
139 Ga0451841_0559011 3300041498 Bacteria 1638
140 Ga0466961_0275129 3300044693 Bacteria 1031
141 Ga0466963_0066264 3300044694 Bacteria 2422
142 Ga0466959_0037107 3300045049 Bacteria 3600
143 Ga0466967_0046226 3300045976 Bacteria 3789
144 Ga0466967_0047087 3300045976 Bacteria 3758
145 Ga0495617_085069 3300046452 Bacteria 1035
146 Ga0495585_0010917 3300046492 Bacteria 5397
147 Ga0495607_0014955 3300046501 Bacteria 5045
148 Ga0495607_0031166 3300046501 Bacteria 3266
149 Ga0495620_0062585 3300046515 Bacteria 1545
150 Ga0495666_0005164 3300046526 Bacteria 6593
151 Ga0495611_0001597 3300046648 Bacteria 11060
152 Ga0495589_0091136 3300046794 Bacteria 1480
153 Ga0495636_0018790 3300047318 Bacteria 2774
154 Ga0495683_0001255 3300047323 Bacteria 17202
155 Ga0495687_011158 3300047443 Bacteria 4853
156 Ga0496101_0318689 3300048904 Bacteria 1220
157 Ga0496102_0003473 3300048905 Bacteria 13362
158 Ga0496102_0012077 3300048905 Bacteria 7463
159 Ga0496102_0323917 3300048905 Bacteria 1452
160 Ga0496102_0345699 3300048905 Bacteria 1400
161 Ga0496103_0020442 3300048906 Bacteria 3976
162 Ga0496103_0064746 3300048906 Bacteria 2279
163 Ga0496104_0011803 3300048907 Bacteria 7841
164 Ga0496106_0016552 3300048909 Bacteria 5455
165 Ga0496110_0023589 3300048913 Bacteria 5234
166 Ga0496110_0391140 3300048913 Bacteria 1267
167 Ga0496113_0061976 3300048916 Bacteria 2823
168 Ga0496115_0309781 3300048918 Bacteria 1293
169 Ga0496117_0007705 3300048920 Bacteria 10420
170 Ga0496118_0001229 3300048921 Bacteria 39376
171 Ga0496119_0000415 3300048922 Bacteria 58663
172 Ga0496119_0055230 3300048922 Bacteria 2413
173 Ga0496120_0000168 3300048923 Bacteria 110705
174 Ga0496120_0005657 3300048923 Bacteria 9884
175 Ga0496121_0030700 3300048924 Bacteria 4930
176 Ga0496121_0073701 3300048924 Bacteria 2735
177 Ga0496122_0037447 3300048925 Bacteria 3904
178 Ga0496123_0017130 3300048926 Bacteria 5847
179 Ga0496124_0115825 3300048927 Bacteria 2150
180 Ga0496126_0000235 3300048929 Bacteria 119657
181 Ga0501032_0131160 3300049569 Bacteria 1653
182 Ga0501033_0053974 3300049570 Bacteria 2974
183 Ga0501034_0553862 3300049571 Bacteria 1059
184 Ga0501038_0017912 3300049574 Bacteria 6399
185 Ga0501046_0004779 3300049580 Bacteria 12209
186 Ga0501047_0013365 3300049581 Bacteria 7780
187 Ga0501048_0007349 3300049582 Bacteria 8352
188 Ga0501070_0001816 3300049586 Bacteria 18800
189 Ga0501071_0367621 3300049587 Bacteria 1096
190 Ga0501072_0280325 3300049588 Bacteria 1326
191 Ga0501074_0137741 3300049590 Bacteria 1746
192 Ga0501076_0361068 3300049592 Bacteria 1193
193 Ga0501079_0047706 3300049741 Bacteria 3305
194 Ga0501035_0004703 3300049822 Bacteria 12963
195 nmdc:mga07m45_20468_c1 3300050496 Bacteria 3593
196 nmdc:mga05p37_302229_c1 3300050507 Bacteria 1901
197 nmdc:mga05p37_8765_c1 3300050507 Bacteria 10124
198 nmdc:mga09592_36776_c1 3300050508 Bacteria 4103
199 nmdc:mga0qj67_23131_c1 3300050509 Bacteria 4778
200 nmdc:mga06r32_79164_c1 3300050510 Bacteria 3197
201 nmdc:mga08y16_377309_c1 3300050511 Bacteria 1454
202 nmdc:mga0rr50_615861_c1 3300050513 Bacteria 926
203 nmdc:mga0a205_477112_c1 3300050515 Bacteria 1106
204 Ga0500641_0002199 3300053096 Bacteria 6903
205 Ga0500595_030646 3300053119 Bacteria 1810
206 Ga0501084_0631592 3300054114 Bacteria 904
207 2548692439 2547132424 Bacteria 8348532
208 2552104981 2551306166 Bacteria 9731570
209 2586062205 2585427649 Bacteria 9053857
210 2643886952 2643221575 Bacteria 4022601
211 2644455085 2643221681 Bacteria 3707866
212 2644539458 2643221697 Bacteria 3575694
213 2645721362 2643221961 Bacteria 3919167
214 2645724640 2643221962 Bacteria 3874254
215 2744956098 2744054611 Bacteria 5611514
216 2795797459 2795385472 Bacteria 6627535
217 2809588626 2808606522 Bacteria 9488490
218 2857731551 2857729791 Bacteria 4040535
219 2866614617 2866612099 Bacteria 7543886
220 2899368224 2899359706 Bacteria 10940472
221 2908813645 2908811453 Bacteria 5478616
222 2915775327 2915768154 Bacteria 8424322
223 2919714769 2919713450 Bacteria 7431245
224 2928124551 2928121344 Bacteria 3972376
225 2946039364 2946037020 Bacteria 4900426
226 2984592969 2984592036 Bacteria 3670284
227 8003323794 8003314358 Bacteria 10575343
228 8045831183 8045830549 Bacteria 4444727
229 Ga0070665_100006110
230 rootH2_10321439
231 Ga0065712_10127417
232 Ga0065707_10081888
233 Ga0068869_100100719
234 Ga0070682_100029264
235 Ga0068868_100001460
236 Ga0070661_100212297
237 Ga0070661_100268303
238 Ga0070668_100041221
239 Ga0070675_100085709
240 Ga0070659_100023090
241 Ga0070659_100486962
242 Ga0070714_100055058
243 Ga0070714_100083527
244 Ga0070713_100133670
245 Ga0070713_100362688
246 Ga0070700_100170222
247 Ga0070708_100062162
248 Ga0070708_100464971
249 Ga0070685_10140645
250 Ga0070706_100044203
251 Ga0070706_100331806
252 Ga0070706_100366450
253 Ga0070707_100000462
254 Ga0070707_100059627
255 Ga0070707_100061460
256 Ga0070698_100011679
257 Ga0070698_100091409
258 Ga0070698_100374450
259 Ga0070698_100597941
260 Ga0070699_100001443
261 Ga0070699_100064748
262 Ga0070697_100074557
263 Ga0068853_100049811
264 Ga0068853_100409776
265 Ga0070664_100070486
266 Ga0068854_100287552
267 Ga0070702_100016214
268 Ga0068852_100085401
269 Ga0068864_100034709
270 Ga0068861_100004975
271 Ga0068861_100208433
272 Ga0068851_10038249
273 Ga0068858_100098806
274 Ga0068862_100196829
275 Ga0081455_10158600
276 Ga0081538_10000504
277 Ga0070717_10023073
278 Ga0070717_10381184
279 Ga0075363_100090141
280 Ga0075367_10001432
281 Ga0075428_100024703
282 Ga0075428_100038602
283 Ga0075428_100628621
284 Ga0075430_100035799
285 Ga0075431_100018699
286 Ga0075431_100030176
287 Ga0075433_10398365
288 Ga0075434_100071652
289 Ga0075429_100090722
290 Ga0075429_100125000
291 Ga0068865_100307549
292 Ga0099794_10031842
293 Ga0111539_10088563
294 Ga0111539_10319363
295 Ga0105245_10437795
296 Ga0105247_10050601
297 Ga0105247_10227946
298 Ga0114129_10001330
299 Ga0114129_10004246
300 Ga0114129_10799383
301 Ga0105242_10484636
302 Ga0105249_10250563
303 Ga0105249_10281978
304 Ga0157369_10031191
305 Ga0157369_10469757
306 Ga0163162_10589641
307 Ga0163162_10621437
308 Ga0157372_10507747
309 Ga0157372_10619099
310 Ga0157375_10208639
311 Ga0157377_10004153
312 Ga0157376_10275027
313 Ga0207688_10018569
314 Ga0207688_10093026
315 Ga0207647_10099771
316 Ga0207643_10103704
317 Ga0207684_10000051
318 Ga0207684_10069383
319 Ga0207684_10149893
320 Ga0207693_10087764
321 Ga0207646_10000164
322 Ga0207650_10115555
323 Ga0207659_10155350
324 Ga0207700_10053255
325 Ga0207664_10002896
326 Ga0207664_10071792
327 Ga0207644_10121628
328 Ga0207706_10058380
329 Ga0207706_10312332
330 Ga0207670_10051477
331 Ga0207670_10412243
332 Ga0207689_10080700
333 Ga0207712_10008057
334 Ga0207668_10047663
335 Ga0207668_10153738
336 Ga0207677_10326793
337 Ga0207703_10027854
338 Ga0207639_10130347
339 Ga0207678_10005173
340 Ga0207678_10137025
341 Ga0207708_10058467
342 Ga0207708_10147153
343 Ga0207648_10381478
344 Ga0207674_10229234
345 Ga0207675_100004585
346 Ga0207675_100121912
347 Ga0207698_10065469
348 Ga0268266_10003202
349 Ga0268265_10361049
350 Ga0307515_10018851
351 Ga0316576_10025446
352 Ga0307405_10055114
353 Ga0307413_10007989
354 Ga0307518_10001260
355 Ga0316584_0020215
356 Ga0395899_0041247
357 Ga0395899_0288982
358 Ga0395900_0029493
359 Ga0395898_0030750
360 Ga0395898_0090630
361 Ga0395905_0629618
362 Ga0395901_0015997
363 Ga0395901_0138379
364 Ga0439465_0004354
365 Ga0451793_0393584
366 Ga0451837_1362785
367 Ga0451841_0559011
368 Ga0466961_0275129
369 Ga0466963_0066264
370 Ga0466959_0037107
371 Ga0466967_0046226
372 Ga0466967_0047087
373 Ga0495617_085069
374 Ga0495585_0010917
375 Ga0495607_0014955
376 Ga0495607_0031166
377 Ga0495620_0062585
378 Ga0495666_0005164
379 Ga0495611_0001597
380 Ga0495589_0091136
381 Ga0495636_0018790
382 Ga0495683_0001255
383 Ga0495687_011158
384 Ga0496101_0318689
385 Ga0496102_0003473
386 Ga0496102_0012077
387 Ga0496102_0323917
388 Ga0496102_0345699
389 Ga0496103_0020442
390 Ga0496103_0064746
391 Ga0496104_0011803
392 Ga0496106_0016552
393 Ga0496110_0023589
394 Ga0496110_0391140
395 Ga0496113_0061976
396 Ga0496115_0309781
397 Ga0496117_0007705
398 Ga0496118_0001229
399 Ga0496119_0000415
400 Ga0496119_0055230
401 Ga0496120_0000168
402 Ga0496120_0005657
403 Ga0496121_0030700
404 Ga0496121_0073701
405 Ga0496122_0037447
406 Ga0496123_0017130
407 Ga0496124_0115825
408 Ga0496126_0000235
409 Ga0501032_0131160
410 Ga0501033_0053974
411 Ga0501034_0553862
412 Ga0501038_0017912
413 Ga0501046_0004779
414 Ga0501047_0013365
415 Ga0501048_0007349
416 Ga0501070_0001816
417 Ga0501071_0367621
418 Ga0501072_0280325
419 Ga0501074_0137741
420 Ga0501076_0361068
421 Ga0501079_0047706
422 Ga0501035_0004703
423 nmdc:mga07m45_20468_c1
424 nmdc:mga05p37_302229_c1
425 nmdc:mga05p37_8765_c1
426 nmdc:mga09592_36776_c1
427 nmdc:mga0qj67_23131_c1
428 nmdc:mga06r32_79164_c1
429 nmdc:mga08y16_377309_c1
430 nmdc:mga0rr50_615861_c1
431 nmdc:mga0a205_477112_c1
432 Ga0500641_0002199
433 Ga0500595_030646
434 Ga0501084_0631592
435 2548692439
436 2552104981
437 2586062205
438 2643886952
439 2644455085
440 2644539458
441 2645721362
442 2645724640
443 2744956098
444 2795797459
445 2809588626
446 2857731551
447 2866614617
448 2899368224
449 2908813645
450 2915775327
451 2919714769
452 2928124551
453 2946039364
454 2984592969
455 8003323794
456 8045831183

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

30

234

0.88

PF08659

KR

KR domain

30

170

0.86

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

36

251

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e03-assembly1.cif.gz_C-2 crystal structure of a putative dehydrogenase from xanthomonas campestris 0.9574 6 254
3kvo-assembly3.cif.gz_B crystal structure of the catalytic domain of human hydroxysteroid dehydrogenase like 2 (hsdl2) 0.9572 6 254
3kvo-assembly3.cif.gz_A crystal structure of the catalytic domain of human hydroxysteroid dehydrogenase like 2 (hsdl2) 0.9458 6 254
3e03-assembly1.cif.gz_C-2 crystal structure of a putative dehydrogenase from xanthomonas campestris 0.9353 6 254
3kvo-assembly3.cif.gz_B crystal structure of the catalytic domain of human hydroxysteroid dehydrogenase like 2 (hsdl2) 0.9351 6 254
ID Description Score Start End Superfamily
af_Q6P5L8_1_275_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9631 6 254 3.40.50.720
af_Q6P5L8_1_275_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9407 6 254 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8929 78 174 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.887 25 174 3.40.50.720
4nimA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8858 31 223 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A820P344-F1-model_v4 Short chain dehydrogenase 1.001 50 176 GO:0005739
AF-A0A4Q5YVM8-F1-model_v4 SDR family oxidoreductase 0.9947 42 253 GO:0016491
AF-A0A3S1RY73-F1-model_v4 SDR family oxidoreductase 0.994 59 240
AF-A0A4Q6F2S2-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9931 47 165
AF-A0A820P344-F1-model_v4 Short chain dehydrogenase 0.993 50 176 GO:0005739

Map