F340669

General Info

Members Datasets Scaffolds Average Seq Length
228 161 456 403

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100153310|Ga0070668_1001533102
Length 434
Sequence LKAVEFEGSGVSRQRAQGSGSKGSGLVMALDFPIYMDNHSTTPMDPRVVEAMLPYFTKTFGNAASRTHAFGWTAEAAVEDARETLAKFIGASSGKEMVFTSGATEANNLAIKGAAEYYQSKGNHLITTVIEHKSVLDSCKRLERQGFDVTYVEVEKNGRVDPAKIERAITDKTILVSVMLANNEVGTIQPIAEIGKITRARSVLLHCDAVQGAGKTPFDVESMNVDLASITAHKIYGPKGIGALYVRRSRPRVRLVSQMDGGGHERGNRSGTLNVAGIVGFARACELMMSEGPSENARIRALRDRLQQRLEASLEQVTLNGDEEHRLDGNLNLSFSFVEGEGLMMAIKDVAVSSGSACTSASLEPSYVLKAMGLDEELAHSSLRFGLGRFNTEAEVDYVADLVIQKVKKLRDISPLYEMHQQGIDIKSIQWAAH

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
77 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
105 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
109 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
110 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
111 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
112 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
113 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 2818991444 Filimonas endophytica 3197 Isolate Unclassified
161 2847085930 Erwinia persicina B64 Isolate Bulb

Type Distribution

Type Percentage (%)
Metagenomes 97.37
Metatranscriptomes 1.75
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.44
Endosphere 3.51
Nodule 0
Rhizoplane 1.32
Rhizosphere 90.79
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100153310 3300005347 Bacteria 1865
2 Ga0070683_100005846 3300005329 Bacteria 10293
3 Ga0068869_100030796 3300005334 Bacteria 3770
4 Ga0070682_100003212 3300005337 Bacteria 9062
5 Ga0070689_100000005 3300005340 Bacteria 396551
6 Ga0070689_100161234 3300005340 Bacteria 1813
7 Ga0070675_100060791 3300005354 Bacteria 3119
8 Ga0070673_100008486 3300005364 Bacteria 6833
9 Ga0070673_100291486 3300005364 Bacteria 1434
10 Ga0070667_100200344 3300005367 Bacteria 1771
11 Ga0070694_100075096 3300005444 Bacteria 2337
12 Ga0070708_100217412 3300005445 Bacteria 1791
13 Ga0070663_100069785 3300005455 Bacteria 2554
14 Ga0070706_100029282 3300005467 Bacteria 5074
15 Ga0070706_100103691 3300005467 Bacteria 2644
16 Ga0070707_100016878 3300005468 Bacteria 6856
17 Ga0070698_100017843 3300005471 Bacteria 7476
18 Ga0070672_100031302 3300005543 Bacteria 4003
19 Ga0070695_100013286 3300005545 Bacteria 4947
20 Ga0070696_100291166 3300005546 Bacteria 1248
21 Ga0070665_100003073 3300005548 Bacteria 17977
22 Ga0070665_100026863 3300005548 Bacteria 5798
23 Ga0070704_100172024 3300005549 Bacteria 1724
24 Ga0068855_100000078 3300005563 Bacteria 117458
25 Ga0068855_100003783 3300005563 Bacteria 18509
26 Ga0068855_100221444 3300005563 Bacteria 2121
27 Ga0068856_100117738 3300005614 Bacteria 2657
28 Ga0068856_100354957 3300005614 Bacteria 1485
29 Ga0068859_100002294 3300005617 Bacteria 19421
30 Ga0068859_100035079 3300005617 Bacteria 5032
31 Ga0068859_100333249 3300005617 Bacteria 1612
32 Ga0068861_100010829 3300005719 Bacteria 6338
33 Ga0068863_100135178 3300005841 Bacteria 2356
34 Ga0068858_100266926 3300005842 Bacteria 1628
35 Ga0081455_10040845 3300005937 Bacteria 4087
36 Ga0081539_10021114 3300005985 Bacteria 4364
37 Ga0081539_10089043 3300005985 Bacteria 1599
38 Ga0075364_10107104 3300006051 Bacteria 1863
39 Ga0075367_10117728 3300006178 Bacteria 1635
40 Ga0075366_10012250 3300006195 Bacteria 4861
41 Ga0075428_100006759 3300006844 Bacteria 12761
42 Ga0075428_100017230 3300006844 Bacteria 7983
43 Ga0075428_100531054 3300006844 Bacteria 1258
44 Ga0075431_100066979 3300006847 Bacteria 3707
45 Ga0075431_100200519 3300006847 Bacteria 2042
46 Ga0075433_10079875 3300006852 Bacteria 2882
47 Ga0075434_100091550 3300006871 Bacteria 3043
48 Ga0075434_100097543 3300006871 Bacteria 2944
49 Ga0075429_100014212 3300006880 Bacteria 6902
50 Ga0097620_100002294 3300006931 Bacteria 19421
51 Ga0097620_100035080 3300006931 Bacteria 5032
52 Ga0097620_100333243 3300006931 Bacteria 1612
53 Ga0111539_10003485 3300009094 Bacteria 20734
54 Ga0111539_10008337 3300009094 Bacteria 13190
55 Ga0111539_10331541 3300009094 Bacteria 1771
56 Ga0105245_10017832 3300009098 Bacteria 6198
57 Ga0105247_10029391 3300009101 Bacteria 3330
58 Ga0114129_10054131 3300009147 Bacteria 5627
59 Ga0114129_10055025 3300009147 Bacteria 5577
60 Ga0114129_10139933 3300009147 Bacteria 3319
61 Ga0105241_10096300 3300009174 Bacteria 2344
62 Ga0105238_10014928 3300009551 Bacteria 7863
63 Ga0105249_10074769 3300009553 Bacteria 3137
64 Ga0157373_10018071 3300013100 Bacteria 5135
65 Ga0157371_10001457 3300013102 Bacteria 24532
66 Ga0157374_10014943 3300013296 Bacteria 6803
67 Ga0163162_10161839 3300013306 Bacteria 2360
68 Ga0157380_10027427 3300014326 Bacteria 4332
69 Ga0157379_10054985 3300014968 Bacteria 3557
70 Ga0207710_10026734 3300025900 Bacteria 2495
71 Ga0207645_10016913 3300025907 Bacteria 4819
72 Ga0207684_10027934 3300025910 Bacteria 4806
73 Ga0207684_10032270 3300025910 Bacteria 4454
74 Ga0207684_10058805 3300025910 Bacteria 3262
75 Ga0207646_10006916 3300025922 Bacteria 11649
76 Ga0207646_10024407 3300025922 Bacteria 5539
77 Ga0207646_10084594 3300025922 Bacteria 2838
78 Ga0207686_10150392 3300025934 Bacteria 1620
79 Ga0207670_10000004 3300025936 Bacteria 707262
80 Ga0207670_10055731 3300025936 Bacteria 2673
81 Ga0207691_10016104 3300025940 Bacteria 7104
82 Ga0207691_10036849 3300025940 Unclassified 4530
83 Ga0207689_10016313 3300025942 Bacteria 6291
84 Ga0207689_10018647 3300025942 Bacteria 5854
85 Ga0207661_10009040 3300025944 Bacteria 7139
86 Ga0207661_10152586 3300025944 Bacteria 1998
87 Ga0207667_10000124 3300025949 Bacteria 118199
88 Ga0207667_10006083 3300025949 Bacteria 14667
89 Ga0207651_10013089 3300025960 Bacteria 4731
90 Ga0207678_10016061 3300026067 Bacteria 6573
91 Ga0207708_10156858 3300026075 Bacteria 1795
92 Ga0207702_10310682 3300026078 Bacteria 1499
93 Ga0207641_10189940 3300026088 Bacteria 1887
94 Ga0207648_10004603 3300026089 Bacteria 14142
95 Ga0207674_10311288 3300026116 Bacteria 1524
96 Ga0207675_100012553 3300026118 Bacteria 7915
97 Ga0207683_10006065 3300026121 Bacteria 10348
98 Ga0207683_10075813 3300026121 Bacteria 2977
99 Ga0207683_10332033 3300026121 Bacteria 1394
100 Ga0209983_1000945 3300027665 Bacteria 6394
101 Ga0209971_1000593 3300027682 Bacteria 9424
102 Ga0209998_10002287 3300027717 Bacteria 4434
103 Ga0209974_10000715 3300027876 Bacteria 11348
104 Ga0207428_10059441 3300027907 Bacteria 3031
105 Ga0207428_10174908 3300027907 Bacteria 1624
106 Ga0268266_10000813 3300028379 Bacteria 41102
107 Ga0268266_10099936 3300028379 Bacteria 2555
108 Ga0268265_10129878 3300028380 Bacteria 2092
109 Ga0265319_1000055 3300028563 Bacteria 89661
110 Ga0265334_10000879 3300028573 Bacteria 15039
111 Ga0265318_10000239 3300028577 Bacteria 47921
112 Ga0265318_10001221 3300028577 Bacteria 15638
113 Ga0265338_10066974 3300028800 Bacteria 3104
114 Ga0307511_10024914 3300030521 Bacteria 5529
115 Ga0265330_10000208 3300031235 Bacteria 45603
116 Ga0265332_10000066 3300031238 Bacteria 89999
117 Ga0265332_10012659 3300031238 Bacteria 3741
118 Ga0265320_10000093 3300031240 Bacteria 74621
119 Ga0265325_10000186 3300031241 Bacteria 44210
120 Ga0265329_10000009 3300031242 Bacteria 74040
121 Ga0265340_10001618 3300031247 Bacteria 12935
122 Ga0265340_10001635 3300031247 Bacteria 12877
123 Ga0265339_10003269 3300031249 Bacteria 11353
124 Ga0265339_10007912 3300031249 Bacteria 6820
125 Ga0265331_10000467 3300031250 Bacteria 38771
126 Ga0265316_10000154 3300031344 Bacteria 76008
127 Ga0265316_10000463 3300031344 Bacteria 46216
128 Ga0265316_10013038 3300031344 Bacteria 7415
129 Ga0307513_10019036 3300031456 Bacteria 8185
130 Ga0265313_10000064 3300031595 Bacteria 103797
131 Ga0265313_10000287 3300031595 Bacteria 55386
132 Ga0265313_10009215 3300031595 Bacteria 6436
133 Ga0307508_10004033 3300031616 Bacteria 14529
134 Ga0265314_10000001 3300031711 Bacteria 3792860
135 Ga0265314_10000184 3300031711 Bacteria 92453
136 Ga0265342_10000140 3300031712 Bacteria 80974
137 Ga0265342_10019038 3300031712 Bacteria 4432
138 Ga0316576_10009992 3300031727 Bacteria 6145
139 Ga0316576_10026738 3300031727 Bacteria 4052
140 Ga0316576_10067832 3300031727 Bacteria 2627
141 Ga0307516_10021745 3300031730 Bacteria 6595
142 Ga0307407_10012817 3300031903 Bacteria 4046
143 Ga0316593_10021424 3300032168 Bacteria 2020
144 Ga0373936_0020907 3300035113 Bacteria 2545
145 Ga0373954_0010839 3300035118 Bacteria 4030
146 Ga0373935_0089695 3300035692 Bacteria 2011
147 Ga0373937_0038189 3300036401 Bacteria 4376
148 Ga0395905_0059328 3300037471 Bacteria 3577
149 Ga0439438_000002 3300041405 Bacteria 618223
150 Ga0439447_006779 3300041407 Bacteria 3684
151 Ga0439465_0013257 3300041413 Bacteria 2573
152 Ga0451807_1063979 3300041486 Bacteria 6364
153 Ga0451837_1195052 3300041494 Bacteria 1644
154 Ga0451849_0594161 3300041505 Bacteria 5493
155 Ga0451853_1708014 3300041512 Bacteria 10010
156 Ga0439432_009426 3300042006 Bacteria 3405
157 Ga0439449_0001616 3300042007 Bacteria 8829
158 Ga0439462_0018743 3300042015 Bacteria 1798
159 Ga0451577_0029674 3300042876 Bacteria 4943
160 Ga0453683_0001855 3300044673 Bacteria 17352
161 Ga0466960_0009038 3300044901 Bacteria 4099
162 Ga0451576_0004428 3300045051 Bacteria 18253
163 Ga0451576_0129832 3300045051 Bacteria 2626
164 Ga0495580_0011515 3300046472 Bacteria 6843
165 Ga0495649_0021611 3300046694 Bacteria 3605
166 Ga0495681_0063088 3300047470 Bacteria 1701
167 Ga0496102_0082723 3300048905 Bacteria 2961
168 Ga0496106_0109045 3300048909 Bacteria 2154
169 Ga0496124_0100332 3300048927 Bacteria 2347
170 Ga0501032_0042911 3300049569 Bacteria 3066
171 Ga0501034_0006792 3300049571 Bacteria 12239
172 Ga0501036_0228542 3300049572 Bacteria 1562
173 Ga0501038_0009955 3300049574 Bacteria 8708
174 Ga0501039_0127460 3300049575 Bacteria 1997
175 Ga0501047_0002222 3300049581 Bacteria 18585
176 Ga0501047_0011254 3300049581 Bacteria 8468
177 Ga0501047_0025574 3300049581 Bacteria 5676
178 Ga0501067_0003568 3300049583 Bacteria 8567
179 Ga0501068_0000252 3300049584 Bacteria 26297
180 Ga0501068_0043203 3300049584 Bacteria 2711
181 Ga0501069_0010126 3300049585 Bacteria 4987
182 Ga0501072_0000032 3300049588 Bacteria 127251
183 Ga0501073_0000928 3300049589 Bacteria 21031
184 Ga0501073_0002811 3300049589 Bacteria 13028
185 Ga0501074_0014003 3300049590 Bacteria 5830
186 Ga0501074_0041851 3300049590 Bacteria 3315
187 Ga0501074_0091508 3300049590 Bacteria 2178
188 Ga0501076_0027032 3300049592 Bacteria 4450
189 Ga0501076_0252840 3300049592 Bacteria 1442
190 Ga0501077_0004742 3300049593 Bacteria 8266
191 Ga0501257_026008 3300049686 Bacteria 1395
192 Ga0501079_0003946 3300049741 Bacteria 10960
193 Ga0501080_0017852 3300049742 Bacteria 6567
194 Ga0501080_0055933 3300049742 Bacteria 3674
195 Ga0501080_0097358 3300049742 Bacteria 2732
196 Ga0501080_0105700 3300049742 Bacteria 2610
197 Ga0501081_0045842 3300049743 Bacteria 3003
198 Ga0501083_0013796 3300049744 Bacteria 5649
199 Ga0501083_0015134 3300049744 Bacteria 5401
200 Ga0501083_0041235 3300049744 Bacteria 3131
201 Ga0501044_0021099 3300049823 Bacteria 6955
202 Ga0501044_0022195 3300049823 Bacteria 6765
203 Ga0501045_0028546 3300049824 Bacteria 4026
204 nmdc:mga00v17_173247_c1 3300050491 Bacteria 1392
205 nmdc:mga0k408_19113_c1 3300050493 Bacteria 3827
206 nmdc:mga0k408_29980_c2 3300050493 Bacteria 2637
207 nmdc:mga05p37_286062_c1 3300050507 Bacteria 1964
208 nmdc:mga05p37_6840_c1 3300050507 Bacteria 13442
209 nmdc:mga09592_188157_c1 3300050508 Bacteria 1787
210 nmdc:mga06r32_167438_c1 3300050510 Bacteria 2181
211 nmdc:mga06r32_73078_c1 3300050510 Bacteria 3321
212 nmdc:mga08y16_104044_c1 3300050511 Bacteria 2956
213 nmdc:mga08y16_123069_c1 3300050511 Bacteria 2699
214 nmdc:mga0n895_142805_c1 3300050512 Bacteria 2423
215 nmdc:mga0n895_60076_c1 3300050512 Bacteria 3750
216 nmdc:mga0a205_32166_c1 3300050515 Bacteria 5030
217 Ga0500650_0022903 3300053098 Bacteria 2769
218 Ga0500616_0017852 3300053153 Bacteria 4020
219 Ga0501084_0010494 3300054114 Bacteria 7657
220 Ga0501084_0080177 3300054114 Bacteria 2737
221 Ga0501084_0103301 3300054114 Bacteria 2393
222 Ga0501084_0222171 3300054114 Bacteria 1594
223 Ga0587070_003591 3300059491 Bacteria 1883
224 Ga0587072_002971 3300059643 Bacteria 2335
225 Ga0587111_0005990 3300060346 Bacteria 1905
226 Ga0501082_0001215 3300060353 Bacteria 22634
227 2819590404 2818991444 Bacteria 6968812
228 2847086228 2847085930 Bacteria 5070450
229 Ga0070668_100153310
230 Ga0070683_100005846
231 Ga0068869_100030796
232 Ga0070682_100003212
233 Ga0070689_100000005
234 Ga0070689_100161234
235 Ga0070675_100060791
236 Ga0070673_100008486
237 Ga0070673_100291486
238 Ga0070667_100200344
239 Ga0070694_100075096
240 Ga0070708_100217412
241 Ga0070663_100069785
242 Ga0070706_100029282
243 Ga0070706_100103691
244 Ga0070707_100016878
245 Ga0070698_100017843
246 Ga0070672_100031302
247 Ga0070695_100013286
248 Ga0070696_100291166
249 Ga0070665_100003073
250 Ga0070665_100026863
251 Ga0070704_100172024
252 Ga0068855_100000078
253 Ga0068855_100003783
254 Ga0068855_100221444
255 Ga0068856_100117738
256 Ga0068856_100354957
257 Ga0068859_100002294
258 Ga0068859_100035079
259 Ga0068859_100333249
260 Ga0068861_100010829
261 Ga0068863_100135178
262 Ga0068858_100266926
263 Ga0081455_10040845
264 Ga0081539_10021114
265 Ga0081539_10089043
266 Ga0075364_10107104
267 Ga0075367_10117728
268 Ga0075366_10012250
269 Ga0075428_100006759
270 Ga0075428_100017230
271 Ga0075428_100531054
272 Ga0075431_100066979
273 Ga0075431_100200519
274 Ga0075433_10079875
275 Ga0075434_100091550
276 Ga0075434_100097543
277 Ga0075429_100014212
278 Ga0097620_100002294
279 Ga0097620_100035080
280 Ga0097620_100333243
281 Ga0111539_10003485
282 Ga0111539_10008337
283 Ga0111539_10331541
284 Ga0105245_10017832
285 Ga0105247_10029391
286 Ga0114129_10054131
287 Ga0114129_10055025
288 Ga0114129_10139933
289 Ga0105241_10096300
290 Ga0105238_10014928
291 Ga0105249_10074769
292 Ga0157373_10018071
293 Ga0157371_10001457
294 Ga0157374_10014943
295 Ga0163162_10161839
296 Ga0157380_10027427
297 Ga0157379_10054985
298 Ga0207710_10026734
299 Ga0207645_10016913
300 Ga0207684_10027934
301 Ga0207684_10032270
302 Ga0207684_10058805
303 Ga0207646_10006916
304 Ga0207646_10024407
305 Ga0207646_10084594
306 Ga0207686_10150392
307 Ga0207670_10000004
308 Ga0207670_10055731
309 Ga0207691_10016104
310 Ga0207691_10036849
311 Ga0207689_10016313
312 Ga0207689_10018647
313 Ga0207661_10009040
314 Ga0207661_10152586
315 Ga0207667_10000124
316 Ga0207667_10006083
317 Ga0207651_10013089
318 Ga0207678_10016061
319 Ga0207708_10156858
320 Ga0207702_10310682
321 Ga0207641_10189940
322 Ga0207648_10004603
323 Ga0207674_10311288
324 Ga0207675_100012553
325 Ga0207683_10006065
326 Ga0207683_10075813
327 Ga0207683_10332033
328 Ga0209983_1000945
329 Ga0209971_1000593
330 Ga0209998_10002287
331 Ga0209974_10000715
332 Ga0207428_10059441
333 Ga0207428_10174908
334 Ga0268266_10000813
335 Ga0268266_10099936
336 Ga0268265_10129878
337 Ga0265319_1000055
338 Ga0265334_10000879
339 Ga0265318_10000239
340 Ga0265318_10001221
341 Ga0265338_10066974
342 Ga0307511_10024914
343 Ga0265330_10000208
344 Ga0265332_10000066
345 Ga0265332_10012659
346 Ga0265320_10000093
347 Ga0265325_10000186
348 Ga0265329_10000009
349 Ga0265340_10001618
350 Ga0265340_10001635
351 Ga0265339_10003269
352 Ga0265339_10007912
353 Ga0265331_10000467
354 Ga0265316_10000154
355 Ga0265316_10000463
356 Ga0265316_10013038
357 Ga0307513_10019036
358 Ga0265313_10000064
359 Ga0265313_10000287
360 Ga0265313_10009215
361 Ga0307508_10004033
362 Ga0265314_10000001
363 Ga0265314_10000184
364 Ga0265342_10000140
365 Ga0265342_10019038
366 Ga0316576_10009992
367 Ga0316576_10026738
368 Ga0316576_10067832
369 Ga0307516_10021745
370 Ga0307407_10012817
371 Ga0316593_10021424
372 Ga0373936_0020907
373 Ga0373954_0010839
374 Ga0373935_0089695
375 Ga0373937_0038189
376 Ga0395905_0059328
377 Ga0439438_000002
378 Ga0439447_006779
379 Ga0439465_0013257
380 Ga0451807_1063979
381 Ga0451837_1195052
382 Ga0451849_0594161
383 Ga0451853_1708014
384 Ga0439432_009426
385 Ga0439449_0001616
386 Ga0439462_0018743
387 Ga0451577_0029674
388 Ga0453683_0001855
389 Ga0466960_0009038
390 Ga0451576_0004428
391 Ga0451576_0129832
392 Ga0495580_0011515
393 Ga0495649_0021611
394 Ga0495681_0063088
395 Ga0496102_0082723
396 Ga0496106_0109045
397 Ga0496124_0100332
398 Ga0501032_0042911
399 Ga0501034_0006792
400 Ga0501036_0228542
401 Ga0501038_0009955
402 Ga0501039_0127460
403 Ga0501047_0002222
404 Ga0501047_0011254
405 Ga0501047_0025574
406 Ga0501067_0003568
407 Ga0501068_0000252
408 Ga0501068_0043203
409 Ga0501069_0010126
410 Ga0501072_0000032
411 Ga0501073_0000928
412 Ga0501073_0002811
413 Ga0501074_0014003
414 Ga0501074_0041851
415 Ga0501074_0091508
416 Ga0501076_0027032
417 Ga0501076_0252840
418 Ga0501077_0004742
419 Ga0501257_026008
420 Ga0501079_0003946
421 Ga0501080_0017852
422 Ga0501080_0055933
423 Ga0501080_0097358
424 Ga0501080_0105700
425 Ga0501081_0045842
426 Ga0501083_0013796
427 Ga0501083_0015134
428 Ga0501083_0041235
429 Ga0501044_0021099
430 Ga0501044_0022195
431 Ga0501045_0028546
432 nmdc:mga00v17_173247_c1
433 nmdc:mga0k408_19113_c1
434 nmdc:mga0k408_29980_c2
435 nmdc:mga05p37_286062_c1
436 nmdc:mga05p37_6840_c1
437 nmdc:mga09592_188157_c1
438 nmdc:mga06r32_167438_c1
439 nmdc:mga06r32_73078_c1
440 nmdc:mga08y16_104044_c1
441 nmdc:mga08y16_123069_c1
442 nmdc:mga0n895_142805_c1
443 nmdc:mga0n895_60076_c1
444 nmdc:mga0a205_32166_c1
445 Ga0500650_0022903
446 Ga0500616_0017852
447 Ga0501084_0010494
448 Ga0501084_0080177
449 Ga0501084_0103301
450 Ga0501084_0222171
451 Ga0587070_003591
452 Ga0587072_002971
453 Ga0587111_0005990
454 Ga0501082_0001215
455 2819590404
456 2847086228

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

34

399

0.93

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

60

231

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rtk-assembly1.cif.gz_A structure of the (niau)2 complex with n-terminal mutation of iscu2 y35d at 2.5 a resolution 0.9847 3 405
5wkp-assembly1.cif.gz_A crystal structure of the human mitochondrial cysteine desulfurase in complex with isd11 and iron-sulfur cluster scaffold protein iscu1, and e. coli acp1 protein at 3.15a 0.9833 3 405
7rtk-assembly1.cif.gz_A structure of the (niau)2 complex with n-terminal mutation of iscu2 y35d at 2.5 a resolution 0.9822 3 405
5wkp-assembly1.cif.gz_A crystal structure of the human mitochondrial cysteine desulfurase in complex with isd11 and iron-sulfur cluster scaffold protein iscu1, and e. coli acp1 protein at 3.15a 0.9808 3 405
5wkp-assembly1.cif.gz_E crystal structure of the human mitochondrial cysteine desulfurase in complex with isd11 and iron-sulfur cluster scaffold protein iscu1, and e. coli acp1 protein at 3.15a 0.979 2 406
ID Description Score Start End Superfamily
af_O61741_269_382_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9862 266 376 3.90.1150.10
af_Q2FXV4_28_254_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9744 33 262 3.40.640.10
3lvjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9735 18 264 3.40.640.10
af_Q8IBI5_408_508_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9718 266 365 3.90.1150.10
af_Q2FXV4_2_370_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9709 7 376 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A022RZZ0-F1-model_v4 Aminotransferase class V domain-containing protein 0.9939 6 227 GO:0016226
AF-A0A3M1YYK2-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9938 7 189 GO:0008483
GO:0016226
GO:0031071
AF-A0A1B6IH21-F1-model_v4 Aminotransferase class V domain-containing protein 0.9934 14 195 GO:0005634
GO:0005739
GO:0005829
GO:0016226
GO:0031071
AF-A0A519TIG4-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9921 3 178 GO:0008483
GO:0016226
GO:0031071
AF-A0A5J6C683-F1-model_v4 Putative cysteine desulfurase 0.9915 104 221 GO:0005739
GO:0005829
GO:0016226
GO:0031071
GO:0046872
GO:0051536

Map