F339566

General Info

Members Datasets Scaffolds Average Seq Length
227 151 454 503

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100080304|Ga0070670_1000803041
Length 540
Sequence MTSFHSPNVMSKSLLDAIAGFKCPFDDQRRNLHNRATRMAELLEMRGVSKVFPGVRALDGVDFTVRRGEIHALMGENGAGKSTLIKVLTGAEQRDGGEVRLDGQAIRPRSPKDAQRVGISTVYQEVNLVPNLSVAENLFLGRQPTWFGSIRWGRMNALAREALGRMNLADIDVTRDLGTYSIAIQQMVAIARALDVKVKLLILDEPTSSLDAGEVRALFDVMRRLRDQGLGIVFVTHFLDQVYEVTDRITVLRNGKLVGEAETKSLPRDRLVGMMMGRELASLEQAAQRHAEEAKPADRKVLLSARGLGRRGKIQPFDLDIAAGEVVGIAGLLGSGRTEMARLLFGIDRADSGEMSIDGKRTTLNSPRAAIAQHFGFLPEDRKTQGIIPDLTIRENIILALQASKGFFRAFSKRKQYDIANHYMKALSIAARDADQPIKNLSGGNQQKVIIARWLASNPRLLILDEPTRGIDVGAKADIQKLVLSLCDEGKAVVFISSELEEVVRCGDRVVVMRDRKKIDELTGQIDEHQILQTIARGSA

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
23 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
24 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
25 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
26 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
29 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
31 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
47 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
48 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
54 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
57 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
60 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
61 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
62 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
70 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
71 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
74 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
75 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
76 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
77 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
93 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
110 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
111 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
112 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
113 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
114 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
115 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
116 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
117 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
118 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
119 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
120 2791355256 Rhizobium sp. M10 Isolate Nodule
121 2791355260 Rhizobium sp. L9 Isolate Nodule
122 2791355266 Rhizobium sp. L43 Isolate Nodule
123 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
124 2802429633 Rhizobium anhuiense J3 Isolate Nodule
125 2818991459 Paenibacillus sp. 597 Isolate Unclassified
126 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
127 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
128 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
129 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
130 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
131 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
132 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
133 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
134 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
135 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
136 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
137 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
138 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
139 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
140 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
141 2936381700 Rhizobium chutanense C16 Isolate Unclassified
142 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
143 2996887358 Rhizobium sp. R711 Isolate Nodule
144 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
145 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
146 8005321885 Rhizobium sp. R72 Isolate Nodule
147 8005382845 Rhizobium sp. R634 Isolate Nodule
148 8005395548 Rhizobium sp. R339 Isolate Nodule
149 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
150 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
151 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.53
Metatranscriptomes 0.44
Isolates 22.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.2
Nodule 15.86
Rhizoplane 0
Rhizosphere 68.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100080304 3300005331 Bacteria 2803
2 JGI25151J46595_10010747 3300003187 Bacteria 4236
3 JGI25406J46586_10001496 3300003203 Bacteria 11031
4 JGI25407J50210_10011903 3300003373 Bacteria 2228
5 Ga0070709_10002523 3300005434 Bacteria 9911
6 Ga0070694_100003299 3300005444 Bacteria 9655
7 Ga0070706_100041590 3300005467 Bacteria 4243
8 Ga0070698_100007203 3300005471 Bacteria 12049
9 Ga0070686_100002128 3300005544 Bacteria 10909
10 Ga0070704_100019121 3300005549 Bacteria 4397
11 Ga0081455_10002376 3300005937 Bacteria 22485
12 Ga0081455_10002940 3300005937 Bacteria 19956
13 Ga0081538_10000105 3300005981 Bacteria 83102
14 Ga0081538_10014201 3300005981 Bacteria 6254
15 Ga0081538_10017072 3300005981 Bacteria 5529
16 Ga0081540_1034277 3300005983 Bacteria 2741
17 Ga0081539_10002667 3300005985 Bacteria 24286
18 Ga0075428_100002304 3300006844 Bacteria 20661
19 Ga0075428_100008947 3300006844 Bacteria 11112
20 Ga0075428_100031878 3300006844 Bacteria 5822
21 Ga0075430_100001933 3300006846 Bacteria 17013
22 Ga0075431_100000218 3300006847 Bacteria 42639
23 Ga0075431_100014510 3300006847 Bacteria 7971
24 Ga0075431_100063228 3300006847 Bacteria 3819
25 Ga0075429_100000068 3300006880 Bacteria 51515
26 Ga0075429_100033997 3300006880 Bacteria 4430
27 Ga0111539_10169542 3300009094 Bacteria 2551
28 Ga0114129_10000786 3300009147 Bacteria 40632
29 Ga0114129_10239858 3300009147 Bacteria 2437
30 Ga0105237_10000015 3300009545 Bacteria 266079
31 Ga0214544_1000097 3300021320 Bacteria 116548
32 Ga0214542_1024228 3300021321 Bacteria 3440
33 Ga0214543_1018752 3300021327 Bacteria 6222
34 Ga0214543_1026835 3300021327 Bacteria 3021
35 Ga0213872_10029921 3300021361 Bacteria 2497
36 Ga0213874_10001507 3300021377 Bacteria 4844
37 Ga0213876_10013045 3300021384 Bacteria 4417
38 Ga0209437_105125 3300025233 Bacteria 2248
39 Ga0209677_100721 3300025253 Bacteria 16836
40 Ga0209233_1000216 3300025261 Bacteria 108123
41 Ga0209025_1000436 3300025294 Bacteria 82202
42 Ga0207671_10000007 3300025914 Bacteria 825758
43 Ga0207668_10070023 3300025972 Bacteria 2500
44 Ga0207674_10024931 3300026116 Bacteria 6384
45 Ga0207675_100006647 3300026118 Bacteria 10937
46 Ga0265319_1007799 3300028563 Bacteria 4764
47 Ga0265338_10000009 3300028800 Bacteria 448611
48 Ga0265320_10009892 3300031240 Bacteria 5712
49 Ga0265327_10003754 3300031251 Bacteria 14117
50 Ga0265314_10009078 3300031711 Bacteria 8446
51 Ga0316576_10024158 3300031727 Bacteria 4242
52 Ga0307413_10023006 3300031824 Bacteria 3370
53 Ga0307409_100000012 3300031995 Bacteria 64668
54 Ga0307416_100000023 3300032002 Bacteria 186960
55 Ga0316593_10022110 3300032168 Bacteria 1995
56 Ga0373944_0007953 3300035089 Bacteria 2857
57 Ga0316574_0052066 3300035398 Bacteria 2552
58 Ga0316582_0098819 3300036647 Bacteria 1931
59 Ga0395899_0032797 3300037312 Bacteria 3903
60 Ga0395900_0004930 3300037418 Bacteria 14052
61 Ga0395900_0146649 3300037418 Bacteria 2413
62 Ga0395898_0014499 3300037466 Bacteria 8096
63 Ga0395898_0022631 3300037466 Bacteria 6364
64 Ga0395905_0011799 3300037471 Bacteria 8437
65 Ga0395901_0002219 3300038443 Bacteria 19813
66 Ga0400483_077079 3300039062 Bacteria 12397
67 Ga0400483_085153 3300039062 Bacteria 44055
68 Ga0436365_1453992 3300039437 Bacteria 6199
69 Ga0436360_0289129 3300039438 Bacteria 7791
70 Ga0436363_0259995 3300039450 Bacteria 6598
71 Ga0436363_0736613 3300039450 Bacteria 1874
72 Ga0436362_0071477 3300039453 Bacteria 6255
73 Ga0439436_0007994 3300041404 Bacteria 3249
74 Ga0439463_008264 3300042016 Bacteria 2564
75 Ga0439464_0002082 3300042439 Bacteria 4874
76 Ga0439460_0005532 3300042461 Bacteria 3106
77 Ga0466966_0103225 3300044684 Bacteria 1762
78 Ga0453684_0000047 3300044712 Bacteria 560243
79 Ga0453684_0012322 3300044712 Bacteria 14149
80 Ga0453684_0206051 3300044712 Bacteria 2289
81 Ga0451576_0081428 3300045051 Bacteria 3367
82 Ga0495586_0001433 3300046535 Bacteria 13198
83 Ga0495645_0030673 3300046543 Bacteria 3917
84 Ga0495634_0027230 3300046642 Bacteria 3978
85 Ga0495599_0006659 3300046678 Bacteria 6974
86 Ga0495658_0040644 3300046683 Bacteria 2586
87 Ga0495613_0049446 3300046689 Bacteria 3103
88 Ga0496116_0019226 3300048919 Bacteria 5236
89 Ga0496122_0000494 3300048925 Bacteria 81969
90 Ga0496122_0003265 3300048925 Bacteria 21509
91 Ga0496122_0079975 3300048925 Bacteria 2282
92 Ga0496123_0000442 3300048926 Bacteria 74540
93 Ga0496123_0036444 3300048926 Bacteria 3488
94 Ga0496124_0000780 3300048927 Bacteria 51967
95 Ga0496124_0000941 3300048927 Bacteria 46621
96 Ga0496124_0002484 3300048927 Bacteria 24040
97 Ga0496125_0000422 3300048928 Bacteria 78615
98 Ga0496125_0000458 3300048928 Bacteria 73821
99 Ga0496125_0000973 3300048928 Bacteria 44802
100 Ga0496126_0004553 3300048929 Bacteria 16472
101 Ga0501031_0003376 3300049568 Bacteria 10253
102 Ga0501036_0000900 3300049572 Bacteria 22245
103 Ga0501038_0011627 3300049574 Bacteria 8031
104 Ga0501038_0021608 3300049574 Bacteria 5774
105 Ga0501039_0001101 3300049575 Bacteria 19836
106 Ga0501039_0142336 3300049575 Bacteria 1884
107 Ga0501040_0000299 3300049576 Bacteria 28917
108 Ga0501040_0015390 3300049576 Bacteria 5058
109 Ga0501040_0022381 3300049576 Bacteria 4229
110 Ga0501040_0041999 3300049576 Bacteria 3114
111 Ga0501041_0002331 3300049577 Bacteria 10736
112 Ga0501041_0009451 3300049577 Bacteria 5748
113 Ga0501041_0071573 3300049577 Bacteria 2129
114 Ga0501042_0002250 3300049578 Bacteria 11779
115 Ga0501042_0005707 3300049578 Bacteria 8035
116 Ga0501046_0001105 3300049580 Bacteria 26429
117 Ga0501046_0002591 3300049580 Bacteria 16908
118 Ga0501046_0020428 3300049580 Bacteria 5477
119 Ga0501047_0065843 3300049581 Bacteria 3492
120 Ga0501048_0000327 3300049582 Bacteria 32763
121 Ga0501048_0002021 3300049582 Bacteria 15407
122 Ga0501048_0006277 3300049582 Bacteria 9036
123 Ga0501068_0006529 3300049584 Bacteria 6435
124 Ga0501071_0000081 3300049587 Bacteria 34513
125 Ga0501071_0119426 3300049587 Bacteria 1953
126 Ga0501072_0000165 3300049588 Bacteria 48091
127 Ga0501072_0031138 3300049588 Bacteria 4174
128 Ga0501072_0034162 3300049588 Bacteria 3985
129 Ga0501072_0055470 3300049588 Bacteria 3123
130 Ga0501072_0073937 3300049588 Bacteria 2694
131 Ga0501074_0000189 3300049590 Bacteria 33646
132 Ga0501074_0001495 3300049590 Bacteria 15745
133 Ga0501074_0026411 3300049590 Bacteria 4211
134 Ga0501075_0000055 3300049591 Bacteria 48367
135 Ga0501075_0027905 3300049591 Bacteria 4163
136 Ga0501075_0032975 3300049591 Bacteria 3852
137 Ga0501075_0034022 3300049591 Bacteria 3793
138 Ga0501075_0045630 3300049591 Bacteria 3290
139 Ga0501076_0000384 3300049592 Bacteria 27642
140 Ga0501076_0004007 3300049592 Bacteria 10408
141 Ga0501076_0006960 3300049592 Bacteria 8219
142 Ga0501076_0017928 3300049592 Bacteria 5385
143 Ga0501077_0002402 3300049593 Bacteria 11234
144 Ga0501077_0006856 3300049593 Bacteria 7010
145 Ga0501077_0014783 3300049593 Bacteria 4904
146 Ga0501079_0000871 3300049741 Bacteria 20711
147 Ga0501079_0002120 3300049741 Bacteria 14261
148 Ga0501079_0004135 3300049741 Bacteria 10744
149 Ga0501079_0061540 3300049741 Bacteria 2896
150 Ga0501080_0029427 3300049742 Bacteria 5113
151 Ga0501081_0000209 3300049743 Bacteria 28859
152 Ga0501081_0002514 3300049743 Bacteria 11557
153 Ga0501083_0025412 3300049744 Bacteria 4100
154 Ga0501035_0015318 3300049822 Bacteria 7076
155 Ga0501044_0064919 3300049823 Bacteria 3724
156 Ga0501045_0000808 3300049824 Bacteria 20234
157 Ga0501045_0110809 3300049824 Bacteria 2035
158 nmdc:mga05p37_163725_c1 3300050507 Bacteria 2715
159 nmdc:mga05p37_2375_c1 3300050507 Bacteria 21920
160 nmdc:mga09592_1981_c1 3300050508 Bacteria 16510
161 nmdc:mga09592_206924_c1 3300050508 Bacteria 1700
162 nmdc:mga0qj67_33172_c1 3300050509 Bacteria 4028
163 nmdc:mga0qj67_4658_c1 3300050509 Bacteria 9952
164 nmdc:mga06r32_78532_c1 3300050510 Bacteria 3209
165 nmdc:mga06r32_95907_c1 3300050510 Bacteria 2904
166 nmdc:mga08y16_30499_c1 3300050511 Bacteria 5675
167 Ga0501084_0000821 3300054114 Bacteria 23869
168 Ga0501084_0016718 3300054114 Bacteria 6092
169 Ga0501084_0029271 3300054114 Bacteria 4607
170 Ga0501082_0002338 3300060353 Bacteria 16597
171 Ga0501082_0003785 3300060353 Bacteria 13223
172 Ga0501082_0050320 3300060353 Bacteria 3593
173 Ga0530510_0000549 3300061734 Bacteria 24195
174 Ga0530510_0004234 3300061734 Bacteria 9917
175 Ga0530510_0004849 3300061734 Bacteria 9311
176 Ga0530510_0022995 3300061734 Bacteria 4442
177 Ga0530510_0078686 3300061734 Bacteria 2398
178 2512730812 2512564039 Bacteria 8739048
179 2513881971 2513237140 Bacteria 7076289
180 2513998724 2513237159 Bacteria 6810126
181 2524460851 2524023209 Bacteria 6679728
182 2524461781 2524023209 Bacteria 6679728
183 2558862626 2558860100 Bacteria 8458965
184 2616310000 2615840626 Bacteria 7921970
185 2720616966 2718218233 Bacteria 6662049
186 2778179938 2775507266 Bacteria 7392367
187 2778180244 2775507266 Bacteria 7392367
188 2792641231 2791355094 Bacteria 7011481
189 2793183360 2791355222 Bacteria 5898266
190 2793298124 2791355256 Bacteria 6798008
191 2793324166 2791355260 Bacteria 6598818
192 2793363553 2791355266 Bacteria 7116587
193 2805936549 2802429606 Bacteria 6346811
194 2806043298 2802429633 Bacteria 7341974
195 2819669857 2818991459 Bacteria 8736032
196 2819670967 2818991459 Bacteria 8736032
197 2841856515 2841851746 Bacteria 7532261
198 2841862659 2841859092 Bacteria 5436171
199 2841870134 2841864319 Bacteria 6742987
200 2842302290 2842298080 Bacteria 6123127
201 2842303255 2842298080 Bacteria 6123127
202 2842407739 2842402390 Bacteria 6681310
203 2842414472 2842409023 Bacteria 6687331
204 2842421167 2842415677 Bacteria 6596907
205 2842514027 2842509118 Bacteria 6850950
206 2842519823 2842515876 Bacteria 5436280
207 2842523940 2842521101 Bacteria 6569494
208 2891375523 2891373044 Bacteria 5202277
209 2896385509 2896384573 Bacteria 7700774
210 2904756663 2904755435 Bacteria 7986759
211 2904759769 2904755435 Bacteria 7986759
212 2904759853 2904755435 Bacteria 7986759
213 2919428367 2919425241 Bacteria 8055701
214 2919429591 2919425241 Bacteria 8055701
215 2933011886 2933011516 Bacteria 5439334
216 2936382933 2936381700 Bacteria 7006523
217 2980128134 2980125574 Bacteria 5567337
218 2996891061 2996887358 Bacteria 5795980
219 3005410283 3005409236 Bacteria 7188837
220 643824827 643692032 Bacteria 6891900
221 8005325588 8005321885 Bacteria 5795980
222 8005386693 8005382845 Bacteria 6732062
223 8005386959 8005382845 Bacteria 6732062
224 8005402043 8005395548 Bacteria 6806915
225 8055070173 8055066027 Bacteria 9479577
226 8055179838 8055172936 Bacteria 9305943
227 8056537776 8056533031 Bacteria 8964429
228 Ga0070670_100080304
229 JGI25151J46595_10010747
230 JGI25406J46586_10001496
231 JGI25407J50210_10011903
232 Ga0070709_10002523
233 Ga0070694_100003299
234 Ga0070706_100041590
235 Ga0070698_100007203
236 Ga0070686_100002128
237 Ga0070704_100019121
238 Ga0081455_10002376
239 Ga0081455_10002940
240 Ga0081538_10000105
241 Ga0081538_10014201
242 Ga0081538_10017072
243 Ga0081540_1034277
244 Ga0081539_10002667
245 Ga0075428_100002304
246 Ga0075428_100008947
247 Ga0075428_100031878
248 Ga0075430_100001933
249 Ga0075431_100000218
250 Ga0075431_100014510
251 Ga0075431_100063228
252 Ga0075429_100000068
253 Ga0075429_100033997
254 Ga0111539_10169542
255 Ga0114129_10000786
256 Ga0114129_10239858
257 Ga0105237_10000015
258 Ga0214544_1000097
259 Ga0214542_1024228
260 Ga0214543_1018752
261 Ga0214543_1026835
262 Ga0213872_10029921
263 Ga0213874_10001507
264 Ga0213876_10013045
265 Ga0209437_105125
266 Ga0209677_100721
267 Ga0209233_1000216
268 Ga0209025_1000436
269 Ga0207671_10000007
270 Ga0207668_10070023
271 Ga0207674_10024931
272 Ga0207675_100006647
273 Ga0265319_1007799
274 Ga0265338_10000009
275 Ga0265320_10009892
276 Ga0265327_10003754
277 Ga0265314_10009078
278 Ga0316576_10024158
279 Ga0307413_10023006
280 Ga0307409_100000012
281 Ga0307416_100000023
282 Ga0316593_10022110
283 Ga0373944_0007953
284 Ga0316574_0052066
285 Ga0316582_0098819
286 Ga0395899_0032797
287 Ga0395900_0004930
288 Ga0395900_0146649
289 Ga0395898_0014499
290 Ga0395898_0022631
291 Ga0395905_0011799
292 Ga0395901_0002219
293 Ga0400483_077079
294 Ga0400483_085153
295 Ga0436365_1453992
296 Ga0436360_0289129
297 Ga0436363_0259995
298 Ga0436363_0736613
299 Ga0436362_0071477
300 Ga0439436_0007994
301 Ga0439463_008264
302 Ga0439464_0002082
303 Ga0439460_0005532
304 Ga0466966_0103225
305 Ga0453684_0000047
306 Ga0453684_0012322
307 Ga0453684_0206051
308 Ga0451576_0081428
309 Ga0495586_0001433
310 Ga0495645_0030673
311 Ga0495634_0027230
312 Ga0495599_0006659
313 Ga0495658_0040644
314 Ga0495613_0049446
315 Ga0496116_0019226
316 Ga0496122_0000494
317 Ga0496122_0003265
318 Ga0496122_0079975
319 Ga0496123_0000442
320 Ga0496123_0036444
321 Ga0496124_0000780
322 Ga0496124_0000941
323 Ga0496124_0002484
324 Ga0496125_0000422
325 Ga0496125_0000458
326 Ga0496125_0000973
327 Ga0496126_0004553
328 Ga0501031_0003376
329 Ga0501036_0000900
330 Ga0501038_0011627
331 Ga0501038_0021608
332 Ga0501039_0001101
333 Ga0501039_0142336
334 Ga0501040_0000299
335 Ga0501040_0015390
336 Ga0501040_0022381
337 Ga0501040_0041999
338 Ga0501041_0002331
339 Ga0501041_0009451
340 Ga0501041_0071573
341 Ga0501042_0002250
342 Ga0501042_0005707
343 Ga0501046_0001105
344 Ga0501046_0002591
345 Ga0501046_0020428
346 Ga0501047_0065843
347 Ga0501048_0000327
348 Ga0501048_0002021
349 Ga0501048_0006277
350 Ga0501068_0006529
351 Ga0501071_0000081
352 Ga0501071_0119426
353 Ga0501072_0000165
354 Ga0501072_0031138
355 Ga0501072_0034162
356 Ga0501072_0055470
357 Ga0501072_0073937
358 Ga0501074_0000189
359 Ga0501074_0001495
360 Ga0501074_0026411
361 Ga0501075_0000055
362 Ga0501075_0027905
363 Ga0501075_0032975
364 Ga0501075_0034022
365 Ga0501075_0045630
366 Ga0501076_0000384
367 Ga0501076_0004007
368 Ga0501076_0006960
369 Ga0501076_0017928
370 Ga0501077_0002402
371 Ga0501077_0006856
372 Ga0501077_0014783
373 Ga0501079_0000871
374 Ga0501079_0002120
375 Ga0501079_0004135
376 Ga0501079_0061540
377 Ga0501080_0029427
378 Ga0501081_0000209
379 Ga0501081_0002514
380 Ga0501083_0025412
381 Ga0501035_0015318
382 Ga0501044_0064919
383 Ga0501045_0000808
384 Ga0501045_0110809
385 nmdc:mga05p37_163725_c1
386 nmdc:mga05p37_2375_c1
387 nmdc:mga09592_1981_c1
388 nmdc:mga09592_206924_c1
389 nmdc:mga0qj67_33172_c1
390 nmdc:mga0qj67_4658_c1
391 nmdc:mga06r32_78532_c1
392 nmdc:mga06r32_95907_c1
393 nmdc:mga08y16_30499_c1
394 Ga0501084_0000821
395 Ga0501084_0016718
396 Ga0501084_0029271
397 Ga0501082_0002338
398 Ga0501082_0003785
399 Ga0501082_0050320
400 Ga0530510_0000549
401 Ga0530510_0004234
402 Ga0530510_0004849
403 Ga0530510_0022995
404 Ga0530510_0078686
405 2512730812
406 2513881971
407 2513998724
408 2524460851
409 2524461781
410 2558862626
411 2616310000
412 2720616966
413 2778179938
414 2778180244
415 2792641231
416 2793183360
417 2793298124
418 2793324166
419 2793363553
420 2805936549
421 2806043298
422 2819669857
423 2819670967
424 2841856515
425 2841862659
426 2841870134
427 2842302290
428 2842303255
429 2842407739
430 2842414472
431 2842421167
432 2842514027
433 2842519823
434 2842523940
435 2891375523
436 2896385509
437 2904756663
438 2904759769
439 2904759853
440 2919428367
441 2919429591
442 2933011886
443 2936382933
444 2980128134
445 2996891061
446 3005410283
447 643824827
448 8005325588
449 8005386693
450 8005386959
451 8005402043
452 8055070173
453 8055179838
454 8056537776

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

58

208

0.9

PF00005

ABC_tran

ABC transporter

314

469

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gaj-assembly1.cif.gz_A crystal structure of a nucleotide-free atp-binding cassette from an abc transporter 0.8925 7 227
1g6h-assembly1.cif.gz_A crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter 0.8888 7 227
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8795 265 494
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8787 7 228
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8749 7 225
ID Description Score Start End Superfamily
af_Q6BEX0_265_495_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9919 266 494 3.40.50.300
af_Q6BEX0_265_495_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9791 266 494 3.40.50.300
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9768 1 243 3.40.50.300
af_P77509_7_245_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9648 5 240 3.40.50.300
af_P32721_262_506_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9607 261 495 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A355RWD2-F1-model_v4 Heme ABC transporter ATP-binding protein 0.9765 7 228 GO:0005524
GO:0016887
AF-A0A1R3VHH3-F1-model_v4 ATP-binding protein of sugar ABC transporter 0.9751 7 240 GO:0005524
GO:0016887
AF-A0A1M3AXL3-F1-model_v4 deleted 0.9727 7 240
AF-A0A2T0UCU5-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein (CUT2 family) 0.9697 9 240 GO:0005524
GO:0016887
AF-A0A435WYV8-F1-model_v4 deleted 0.9688 373 498

Map