F339528

General Info

Members Datasets Scaffolds Average Seq Length
227 164 454 479

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10000191|Ga0070658_1000019136
Length 560
Sequence VTDKKRAARPAQNAHPTPTQDERSQVVAEPPPVETLPDIPGRINYSEEIPDAQEVNEIVDRLLSTQPEEQPHMSPTGEFDADVVVIGSGPGGYVCAIRAAQLGARTVCIEKQASEWGGTCLNWGCIPTKTLIASTERLHHVQTAGVMGVTISGEIGFDFAKMMERKTKVVTTLRNGVSGLLKNNHIRAVVGTASLVDANTIEVVDADGKTERITSKNIIIATGSVPIMPPVPGLAKDPADPRGVSSNGIWTSDEAVYAKECPKRMVVIGAGAVGLEFAYVFRSLGAEVDLVEIAPEILPAGDKEVAAELRKALKKQGIRFHLSSKVTGVEQKDGVRIVTIQGENETKTVEVDVVLVGAGRKPLVDGLNLDKVGVQVVSEGPMVKRGIVVNEYLQTTVPNIYAIGDVTGKLLLAHLGSHMGIVASENAMGHQVKMDYRAVPAPIYTSPELASVGLTEDEARAQGYDVMTGRFPFRPLGRAMALNEQEGMVKIISERKYGEVLGVHIVGPYATEMIHEAVVAIKLEATIEELMTTIHAHPTLSEAMGEAALDVKGEAIHKMR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
76 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
164 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.95
Metatranscriptomes 6.17
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 2.2
Rhizosphere 90.31
Stem 0
Stem Tuber 0
Unclassified 5.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000191 3300005327 Bacteria 54064
2 rootH2_10074467 3300003320 Bacteria 5381
3 Ga0065707_10090375 3300005295 Bacteria 4105
4 Ga0070666_10079037 3300005335 Bacteria 2246
5 Ga0070680_100001764 3300005336 Bacteria 15899
6 Ga0070680_100098976 3300005336 Unclassified 2419
7 Ga0070669_100027377 3300005353 Unclassified 4102
8 Ga0070709_10069128 3300005434 Bacteria 2273
9 Ga0070714_100048080 3300005435 Bacteria 3627
10 Ga0070713_100058155 3300005436 Bacteria 3223
11 Ga0070711_100067755 3300005439 Bacteria 2505
12 Ga0070708_100003024 3300005445 Bacteria 13053
13 Ga0070681_10002915 3300005458 Bacteria 15837
14 Ga0070681_10012918 3300005458 Bacteria 8293
15 Ga0070706_100152038 3300005467 Bacteria 2160
16 Ga0070699_100000007 3300005518 Bacteria 310847
17 Ga0070699_100072625 3300005518 Unclassified 2993
18 Ga0070679_100004071 3300005530 Bacteria 13476
19 Ga0070679_100009060 3300005530 Bacteria 9390
20 Ga0070679_100010093 3300005530 Bacteria 8949
21 Ga0070693_100028972 3300005547 Bacteria 3016
22 Ga0068855_100000879 3300005563 Bacteria 37240
23 Ga0068855_100015941 3300005563 Bacteria 9039
24 Ga0068855_100100399 3300005563 Bacteria 3332
25 Ga0068854_100006873 3300005578 Bacteria 7256
26 Ga0068856_100084446 3300005614 Bacteria 3154
27 Ga0068852_100028567 3300005616 Bacteria 4568
28 Ga0068852_100068634 3300005616 Bacteria 3104
29 Ga0068866_10000046 3300005718 Bacteria 48270
30 Ga0068858_100062450 3300005842 Unclassified 3444
31 Ga0081538_10000712 3300005981 Bacteria 36271
32 Ga0081538_10007497 3300005981 Bacteria 9429
33 Ga0070717_10004535 3300006028 Bacteria 10041
34 Ga0070717_10029503 3300006028 Unclassified 4401
35 Ga0070717_10080341 3300006028 Bacteria 2735
36 Ga0070717_10183062 3300006028 Bacteria 1827
37 Ga0070715_10048011 3300006163 Bacteria 1822
38 Ga0075433_10048238 3300006852 Bacteria 3703
39 Ga0105240_10006206 3300009093 Bacteria 17585
40 Ga0105240_10163077 3300009093 Bacteria 2646
41 Ga0105245_10004237 3300009098 Bacteria 12724
42 Ga0105242_10000180 3300009176 Bacteria 48253
43 Ga0105248_10000003 3300009177 Bacteria 1019601
44 Ga0105238_10097707 3300009551 Bacteria 2922
45 Ga0105238_10171129 3300009551 Bacteria 2148
46 Ga0105239_10000687 3300010375 Bacteria 48253
47 Ga0105239_10056506 3300010375 Bacteria 4305
48 Ga0157371_10005186 3300013102 Bacteria 11087
49 Ga0157369_10002463 3300013105 Bacteria 22196
50 Ga0157369_10002488 3300013105 Bacteria 22075
51 Ga0157378_10036312 3300013297 Bacteria 4361
52 Ga0157378_10101139 3300013297 Bacteria 2632
53 Ga0163163_10174820 3300014325 Bacteria 2194
54 Ga0182006_1000971 3300015261 Bacteria 18999
55 Ga0213872_10001464 3300021361 Bacteria 15328
56 Ga0213872_10020816 3300021361 Bacteria 3022
57 Ga0213876_10035049 3300021384 Bacteria 2647
58 Ga0213875_10009329 3300021388 Bacteria 4975
59 Ga0224712_10024611 3300022467 Bacteria 2106
60 Ga0207642_10000027 3300025899 Bacteria 48240
61 Ga0207699_10054458 3300025906 Bacteria 2376
62 Ga0207705_10000965 3300025909 Bacteria 23538
63 Ga0207707_10004285 3300025912 Bacteria 12626
64 Ga0207707_10012403 3300025912 Bacteria 7408
65 Ga0207707_10048600 3300025912 Bacteria 3695
66 Ga0207695_10015904 3300025913 Bacteria 8837
67 Ga0207695_10065067 3300025913 Bacteria 3750
68 Ga0207695_10127195 3300025913 Bacteria 2509
69 Ga0207660_10001092 3300025917 Bacteria 18104
70 Ga0207652_10005565 3300025921 Bacteria 10213
71 Ga0207652_10009404 3300025921 Bacteria 7858
72 Ga0207652_10103766 3300025921 Bacteria 2514
73 Ga0207646_10062507 3300025922 Bacteria 3324
74 Ga0207694_10074372 3300025924 Bacteria 2659
75 Ga0207700_10000749 3300025928 Bacteria 18685
76 Ga0207700_10129791 3300025928 Bacteria 2056
77 Ga0207664_10095204 3300025929 Bacteria 2449
78 Ga0207664_10114341 3300025929 Bacteria 2249
79 Ga0207686_10000072 3300025934 Bacteria 92734
80 Ga0207711_10000012 3300025941 Bacteria 515147
81 Ga0207667_10013649 3300025949 Bacteria 9286
82 Ga0207667_10019061 3300025949 Bacteria 7670
83 Ga0207667_10119194 3300025949 Bacteria 2720
84 Ga0207667_10171427 3300025949 Bacteria 2230
85 Ga0207703_10052551 3300026035 Unclassified 3309
86 Ga0207698_10020284 3300026142 Bacteria 4571
87 Ga0207698_10033811 3300026142 Bacteria 3719
88 Ga0265338_10026060 3300028800 Bacteria 5911
89 Ga0265338_10054204 3300028800 Bacteria 3578
90 Ga0265324_10008827 3300029957 Bacteria 3973
91 Ga0265325_10000680 3300031241 Bacteria 24768
92 Ga0265325_10001005 3300031241 Bacteria 20292
93 Ga0265325_10017782 3300031241 Bacteria 3949
94 Ga0265325_10021172 3300031241 Bacteria 3577
95 Ga0265325_10035148 3300031241 Bacteria 2663
96 Ga0265340_10004755 3300031247 Bacteria 7548
97 Ga0265340_10077181 3300031247 Bacteria 1572
98 Ga0265339_10000562 3300031249 Bacteria 29006
99 Ga0265339_10007240 3300031249 Bacteria 7190
100 Ga0265339_10027853 3300031249 Bacteria 3218
101 Ga0265331_10008553 3300031250 Bacteria 5814
102 Ga0265316_10000778 3300031344 Bacteria 35219
103 Ga0265316_10045206 3300031344 Bacteria 3498
104 Ga0265316_10061059 3300031344 Bacteria 2928
105 Ga0265313_10005806 3300031595 Bacteria 8963
106 Ga0265313_10013598 3300031595 Bacteria 4871
107 Ga0265314_10022661 3300031711 Bacteria 4808
108 Ga0265342_10000821 3300031712 Bacteria 31185
109 Ga0265342_10014112 3300031712 Bacteria 5314
110 Ga0265342_10049737 3300031712 Bacteria 2507
111 Ga0307405_10012924 3300031731 Bacteria 4439
112 Ga0307405_10123830 3300031731 Bacteria 1774
113 Ga0307410_10025556 3300031852 Bacteria 3707
114 Ga0307410_10093272 3300031852 Bacteria 2142
115 Ga0307407_10077245 3300031903 Bacteria 2002
116 Ga0307409_100008564 3300031995 Bacteria 6219
117 Ga0307409_100109858 3300031995 Bacteria 2309
118 Ga0307416_100011867 3300032002 Bacteria 5841
119 Ga0307414_10106167 3300032004 Bacteria 2125
120 Ga0307411_10016877 3300032005 Bacteria 4142
121 Ga0373944_0006523 3300035089 Bacteria 3099
122 Ga0373923_0022699 3300035111 Bacteria 2463
123 Ga0373956_0006190 3300035119 Bacteria 4787
124 Ga0373955_0006025 3300035172 Bacteria 5500
125 Ga0373924_0000056 3300035410 Bacteria 29371
126 Ga0373924_0055149 3300035410 Bacteria 1654
127 Ga0373935_0055926 3300035692 Bacteria 2515
128 Ga0373927_0003811 3300035695 Bacteria 10698
129 Ga0373927_0043864 3300035695 Bacteria 2894
130 Ga0373947_0017916 3300035725 Bacteria 4076
131 Ga0373947_0038248 3300035725 Bacteria 2849
132 Ga0373937_0000772 3300036401 Bacteria 27672
133 Ga0316582_0013938 3300036647 Bacteria 4544
134 Ga0373925_0004070 3300037068 Bacteria 11102
135 Ga0373925_0063107 3300037068 Bacteria 2787
136 Ga0373925_0088664 3300037068 Bacteria 2362
137 Ga0395899_0138012 3300037312 Bacteria 1737
138 Ga0395900_0098292 3300037418 Bacteria 3007
139 Ga0395898_0150342 3300037466 Bacteria 2228
140 Ga0395905_0011614 3300037471 Bacteria 8507
141 Ga0395905_0115069 3300037471 Bacteria 2527
142 Ga0436364_0254808 3300037853 Bacteria 10449
143 Ga0436364_0874757 3300037853 Bacteria 13270
144 Ga0436365_0092806 3300039437 Bacteria 5329
145 Ga0436365_0484301 3300039437 Bacteria 2844
146 Ga0436365_0665905 3300039437 Bacteria 19360
147 Ga0436365_0766830 3300039437 Bacteria 4398
148 Ga0436365_1853608 3300039437 Bacteria 5498
149 Ga0436360_0857478 3300039438 Bacteria 22981
150 Ga0436361_0031980 3300039447 Bacteria 3488
151 Ga0436361_0277482 3300039447 Bacteria 12032
152 Ga0436361_0387922 3300039447 Bacteria 4160
153 Ga0451577_0067836 3300042876 Bacteria 3182
154 Ga0453684_0000458 3300044712 Bacteria 163146
155 Ga0453684_0003277 3300044712 Bacteria 36963
156 Ga0466957_0003057 3300044842 Bacteria 9100
157 Ga0466960_0008566 3300044901 Bacteria 4191
158 Ga0466959_0107039 3300045049 Bacteria 1999
159 Ga0451576_0083006 3300045051 Bacteria 3333
160 Ga0466967_0013737 3300045976 Bacteria 6273
161 Ga0466967_0055219 3300045976 Bacteria 3499
162 Ga0495639_0041172 3300046475 Bacteria 2081
163 Ga0495664_0022979 3300046477 Bacteria 3616
164 Ga0495652_0024656 3300046529 Bacteria 5322
165 Ga0495587_0010608 3300046536 Bacteria 5853
166 Ga0495645_0001782 3300046543 Bacteria 14619
167 Ga0495635_0071873 3300046663 Bacteria 2371
168 Ga0495646_0028177 3300046680 Bacteria 3519
169 Ga0495600_0005895 3300046809 Bacteria 7413
170 Ga0495660_0070200 3300046810 Bacteria 1860
171 Ga0495581_0087145 3300047315 Bacteria 1810
172 Ga0495604_0005133 3300047317 Bacteria 10364
173 Ga0495675_0051219 3300047444 Bacteria 2623
174 Ga0496102_0088799 3300048905 Bacteria 2858
175 Ga0496104_0145356 3300048907 Bacteria 2277
176 Ga0496105_0031694 3300048908 Unclassified 4334
177 Ga0496112_0055482 3300048915 Bacteria 3896
178 Ga0496113_0004546 3300048916 Bacteria 8545
179 Ga0496125_0008820 3300048928 Bacteria 10486
180 Ga0496126_0226217 3300048929 Bacteria 1569
181 Ga0501032_0001165 3300049569 Bacteria 21094
182 Ga0501033_0016622 3300049570 Bacteria 5566
183 Ga0501034_0014757 3300049571 Bacteria 8041
184 Ga0501036_0007493 3300049572 Bacteria 8900
185 Ga0501037_0018616 3300049573 Bacteria 5117
186 Ga0501038_0014476 3300049574 Bacteria 7187
187 Ga0501039_0008248 3300049575 Bacteria 7939
188 Ga0501042_0087951 3300049578 Bacteria 2229
189 Ga0501043_0004312 3300049579 Bacteria 11577
190 Ga0501046_0002931 3300049580 Bacteria 15788
191 Ga0501047_0008796 3300049581 Bacteria 9526
192 Ga0501048_0087686 3300049582 Bacteria 2195
193 Ga0501067_0000907 3300049583 Bacteria 15936
194 Ga0501070_0029880 3300049586 Bacteria 4565
195 Ga0501071_0038114 3300049587 Bacteria 3434
196 Ga0501072_0001993 3300049588 Bacteria 15211
197 Ga0501073_0000471 3300049589 Bacteria 27854
198 Ga0501074_0028213 3300049590 Bacteria 4067
199 Ga0501075_0002540 3300049591 Bacteria 12154
200 Ga0501076_0008478 3300049592 Bacteria 7532
201 Ga0501079_0005210 3300049741 Bacteria 9660
202 Ga0501080_0000006 3300049742 Bacteria 138444
203 Ga0501081_0101626 3300049743 Bacteria 2033
204 Ga0501083_0003464 3300049744 Bacteria 11032
205 Ga0501044_0017662 3300049823 Bacteria 7651
206 Ga0501284_00001 3300050005 Bacteria 261916
207 Ga0500643_009263 3300053087 Bacteria 3771
208 Ga0500595_006667 3300053119 Bacteria 4870
209 Ga0500595_026825 3300053119 Bacteria 1980
210 Ga0501084_0000747 3300054114 Bacteria 24758
211 Ga0501084_0048128 3300054114 Bacteria 3570
212 Ga0587066_003352 3300059490 Unclassified 1874
213 Ga0587070_005022 3300059491 Bacteria 1711
214 Ga0587073_0001063 3300059492 Bacteria 3000
215 Ga0587077_004583 3300059493 Unclassified 1827
216 Ga0587082_002907 3300059504 Unclassified 1997
217 Ga0587088_003737 3300059508 Unclassified 1871
218 Ga0587092_003993 3300059512 Bacteria 1724
219 Ga0587094_003940 3300059513 Bacteria 1654
220 Ga0587068_004607 3300059641 Bacteria 1832
221 Ga0587072_006123 3300059643 Unclassified 1822
222 Ga0587076_003216 3300059645 Unclassified 1923
223 Ga0587071_005732 3300060344 Bacteria 1912
224 Ga0587111_0007605 3300060346 Bacteria 1766
225 Ga0501082_0044370 3300060353 Bacteria 3834
226 2884793714 2884791551 Bacteria 8511252
227 2980125901 2980125574 Bacteria 5567337
228 Ga0070658_10000191
229 rootH2_10074467
230 Ga0065707_10090375
231 Ga0070666_10079037
232 Ga0070680_100001764
233 Ga0070680_100098976
234 Ga0070669_100027377
235 Ga0070709_10069128
236 Ga0070714_100048080
237 Ga0070713_100058155
238 Ga0070711_100067755
239 Ga0070708_100003024
240 Ga0070681_10002915
241 Ga0070681_10012918
242 Ga0070706_100152038
243 Ga0070699_100000007
244 Ga0070699_100072625
245 Ga0070679_100004071
246 Ga0070679_100009060
247 Ga0070679_100010093
248 Ga0070693_100028972
249 Ga0068855_100000879
250 Ga0068855_100015941
251 Ga0068855_100100399
252 Ga0068854_100006873
253 Ga0068856_100084446
254 Ga0068852_100028567
255 Ga0068852_100068634
256 Ga0068866_10000046
257 Ga0068858_100062450
258 Ga0081538_10000712
259 Ga0081538_10007497
260 Ga0070717_10004535
261 Ga0070717_10029503
262 Ga0070717_10080341
263 Ga0070717_10183062
264 Ga0070715_10048011
265 Ga0075433_10048238
266 Ga0105240_10006206
267 Ga0105240_10163077
268 Ga0105245_10004237
269 Ga0105242_10000180
270 Ga0105248_10000003
271 Ga0105238_10097707
272 Ga0105238_10171129
273 Ga0105239_10000687
274 Ga0105239_10056506
275 Ga0157371_10005186
276 Ga0157369_10002463
277 Ga0157369_10002488
278 Ga0157378_10036312
279 Ga0157378_10101139
280 Ga0163163_10174820
281 Ga0182006_1000971
282 Ga0213872_10001464
283 Ga0213872_10020816
284 Ga0213876_10035049
285 Ga0213875_10009329
286 Ga0224712_10024611
287 Ga0207642_10000027
288 Ga0207699_10054458
289 Ga0207705_10000965
290 Ga0207707_10004285
291 Ga0207707_10012403
292 Ga0207707_10048600
293 Ga0207695_10015904
294 Ga0207695_10065067
295 Ga0207695_10127195
296 Ga0207660_10001092
297 Ga0207652_10005565
298 Ga0207652_10009404
299 Ga0207652_10103766
300 Ga0207646_10062507
301 Ga0207694_10074372
302 Ga0207700_10000749
303 Ga0207700_10129791
304 Ga0207664_10095204
305 Ga0207664_10114341
306 Ga0207686_10000072
307 Ga0207711_10000012
308 Ga0207667_10013649
309 Ga0207667_10019061
310 Ga0207667_10119194
311 Ga0207667_10171427
312 Ga0207703_10052551
313 Ga0207698_10020284
314 Ga0207698_10033811
315 Ga0265338_10026060
316 Ga0265338_10054204
317 Ga0265324_10008827
318 Ga0265325_10000680
319 Ga0265325_10001005
320 Ga0265325_10017782
321 Ga0265325_10021172
322 Ga0265325_10035148
323 Ga0265340_10004755
324 Ga0265340_10077181
325 Ga0265339_10000562
326 Ga0265339_10007240
327 Ga0265339_10027853
328 Ga0265331_10008553
329 Ga0265316_10000778
330 Ga0265316_10045206
331 Ga0265316_10061059
332 Ga0265313_10005806
333 Ga0265313_10013598
334 Ga0265314_10022661
335 Ga0265342_10000821
336 Ga0265342_10014112
337 Ga0265342_10049737
338 Ga0307405_10012924
339 Ga0307405_10123830
340 Ga0307410_10025556
341 Ga0307410_10093272
342 Ga0307407_10077245
343 Ga0307409_100008564
344 Ga0307409_100109858
345 Ga0307416_100011867
346 Ga0307414_10106167
347 Ga0307411_10016877
348 Ga0373944_0006523
349 Ga0373923_0022699
350 Ga0373956_0006190
351 Ga0373955_0006025
352 Ga0373924_0000056
353 Ga0373924_0055149
354 Ga0373935_0055926
355 Ga0373927_0003811
356 Ga0373927_0043864
357 Ga0373947_0017916
358 Ga0373947_0038248
359 Ga0373937_0000772
360 Ga0316582_0013938
361 Ga0373925_0004070
362 Ga0373925_0063107
363 Ga0373925_0088664
364 Ga0395899_0138012
365 Ga0395900_0098292
366 Ga0395898_0150342
367 Ga0395905_0011614
368 Ga0395905_0115069
369 Ga0436364_0254808
370 Ga0436364_0874757
371 Ga0436365_0092806
372 Ga0436365_0484301
373 Ga0436365_0665905
374 Ga0436365_0766830
375 Ga0436365_1853608
376 Ga0436360_0857478
377 Ga0436361_0031980
378 Ga0436361_0277482
379 Ga0436361_0387922
380 Ga0451577_0067836
381 Ga0453684_0000458
382 Ga0453684_0003277
383 Ga0466957_0003057
384 Ga0466960_0008566
385 Ga0466959_0107039
386 Ga0451576_0083006
387 Ga0466967_0013737
388 Ga0466967_0055219
389 Ga0495639_0041172
390 Ga0495664_0022979
391 Ga0495652_0024656
392 Ga0495587_0010608
393 Ga0495645_0001782
394 Ga0495635_0071873
395 Ga0495646_0028177
396 Ga0495600_0005895
397 Ga0495660_0070200
398 Ga0495581_0087145
399 Ga0495604_0005133
400 Ga0495675_0051219
401 Ga0496102_0088799
402 Ga0496104_0145356
403 Ga0496105_0031694
404 Ga0496112_0055482
405 Ga0496113_0004546
406 Ga0496125_0008820
407 Ga0496126_0226217
408 Ga0501032_0001165
409 Ga0501033_0016622
410 Ga0501034_0014757
411 Ga0501036_0007493
412 Ga0501037_0018616
413 Ga0501038_0014476
414 Ga0501039_0008248
415 Ga0501042_0087951
416 Ga0501043_0004312
417 Ga0501046_0002931
418 Ga0501047_0008796
419 Ga0501048_0087686
420 Ga0501067_0000907
421 Ga0501070_0029880
422 Ga0501071_0038114
423 Ga0501072_0001993
424 Ga0501073_0000471
425 Ga0501074_0028213
426 Ga0501075_0002540
427 Ga0501076_0008478
428 Ga0501079_0005210
429 Ga0501080_0000006
430 Ga0501081_0101626
431 Ga0501083_0003464
432 Ga0501044_0017662
433 Ga0501284_00001
434 Ga0500643_009263
435 Ga0500595_006667
436 Ga0500595_026825
437 Ga0501084_0000747
438 Ga0501084_0048128
439 Ga0587066_003352
440 Ga0587070_005022
441 Ga0587073_0001063
442 Ga0587077_004583
443 Ga0587082_002907
444 Ga0587088_003737
445 Ga0587092_003993
446 Ga0587094_003940
447 Ga0587068_004607
448 Ga0587072_006123
449 Ga0587076_003216
450 Ga0587071_005732
451 Ga0587111_0007605
452 Ga0501082_0044370
453 2884793714
454 2980125901

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

439

548

0.98

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

264

346

0.93

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

81

420

0.93

PF00890

FAD_binding_2

FAD binding domain

82

124

0.91

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

264

355

0.84

PF12831

FAD_oxidored

FAD dependent oxidoreductase

82

222

0.84

PF01134

GIDA

Glucose inhibited division protein A

82

251

0.76

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

84

404

0.75

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

181

313

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9675 1 474
1ebd-assembly1.cif.gz_B dihydrolipoamide dehydrogenase complexed with the binding domain of the dihydrolipoamide acetylase 0.9642 4 464
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9635 1 474
2qae-assembly1.cif.gz_B crystal structure analysis of trypanosoma cruzi lipoamide dehydrogenase 0.9629 4 474
2eq8-assembly1.cif.gz_A crystal structure of lipoamide dehydrogenase from thermus thermophilus hb8 with psbdp 0.9628 4 474
ID Description Score Start End Superfamily
1ebdA03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.989 355 466 3.30.390.30
6bz0A03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9885 355 474 3.30.390.30
af_Q8I5A0_386_506_3.30.390.30 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9798 350 467 3.30.390.30
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9757 173 242 3.50.50.60
1dxlB03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9713 355 474 3.30.390.30
ID Description Score Start End GO Terms
AF-A0A353IKV2-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9981 381 472 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A2P7P015-F1-model_v4 deleted 0.9931 367 441
AF-A0A4Q3NV27-F1-model_v4 deleted 0.9924 368 474
AF-A0A3M1SKN8-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9915 311 474 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A2M7RXR4-F1-model_v4 Dihydrolipoyl dehydrogenase 0.9904 303 474 GO:0004148
GO:0006090
GO:0006103
GO:0050660

Map