F338960

General Info

Members Datasets Scaffolds Average Seq Length
226 176 452 311

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10375215|Ga0207708_103752151
Length 359
Sequence MMQYSFRCSAWLDVMFQHVVRTLRVWQAGGGSILNRLSYLTDNMHANATLTPLMRAKMVFQHAASGRSLRASAAAFGVSDKTVRKWLKRAQQSGSPQRLEDRSSVPLRQPRKTPPQLEAQILALRRQRRSYAQILMVLPISKASLSRILQRHGLNRLASLDPPKPPVQRYERSSPGELLHLDIKKLGRFLQPGVRATGDRSHRNPGAGTESLHVAIDDHSRLAFASIFPDEKTPSVLAALQQAIAFYQTHGIQIQRVLTDRGSTYRSKLFAAACKNLGLRHLFTRPYRPQTNGKAERFIQTITREWAYARTYDSSDHRASFLPLYLHDYNFHRPHSALNYRPPSSRLPQTADNVSRYNS

Samples

Sample ID Description Type Environment
1 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
61 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
69 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
70 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
71 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
72 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
73 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
76 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
77 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
82 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
85 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
146 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
147 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
148 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
149 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
150 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
151 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
152 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
153 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
154 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
155 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
156 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
157 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
158 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
159 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
160 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
161 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
162 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
163 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
164 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
165 3300053728 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 endosphere Metagenome Endosphere
166 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
169 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
170 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
176 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.36
Metatranscriptomes 0
Isolates 6.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.72
Nodule 0
Rhizoplane 8.41
Rhizosphere 65.49
Stem 0
Stem Tuber 0
Unclassified 0.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207708_10375215 3300026075 Bacteria 1172
2 JGI25404J52841_10033344 3300003659 Bacteria 1097
3 Ga0058692_1012456 3300003856 Bacteria 2013
4 JGI25405J52794_10033918 3300003911 Bacteria 1066
5 Ga0070690_100114316 3300005330 Bacteria 1805
6 Ga0070673_100308800 3300005364 Bacteria 1394
7 Ga0070714_100195508 3300005435 Bacteria 1848
8 Ga0070714_100264171 3300005435 Bacteria 1594
9 Ga0070701_10121850 3300005438 Bacteria 1470
10 Ga0070711_100405462 3300005439 Bacteria 1107
11 Ga0070663_100288762 3300005455 Bacteria 1309
12 Ga0070706_100315296 3300005467 Bacteria 1459
13 Ga0070699_100252699 3300005518 Bacteria 1575
14 Ga0070699_100338213 3300005518 Bacteria 1355
15 Ga0070693_100300547 3300005547 Bacteria 1082
16 Ga0068859_100330110 3300005617 Bacteria 1619
17 Ga0068864_100373073 3300005618 Bacteria 1351
18 Ga0068858_100322533 3300005842 Bacteria 1476
19 Ga0081455_10030808 3300005937 Bacteria 4867
20 Ga0081455_10043902 3300005937 Bacteria 3906
21 Ga0081540_1003260 3300005983 Bacteria 12894
22 Ga0081540_1095361 3300005983 Bacteria 1297
23 Ga0081539_10106094 3300005985 Bacteria 1423
24 Ga0081539_10120596 3300005985 Bacteria 1303
25 Ga0070715_10036191 3300006163 Bacteria 2035
26 Ga0070712_100147046 3300006175 Bacteria 1805
27 Ga0075367_10129658 3300006178 Bacteria 1558
28 Ga0075366_10032394 3300006195 Bacteria 3076
29 Ga0075430_100423460 3300006846 Bacteria 1099
30 Ga0075433_10409553 3300006852 Bacteria 1196
31 Ga0097620_100330093 3300006931 Bacteria 1619
32 Ga0105240_10497056 3300009093 Bacteria 1357
33 Ga0105240_10541658 3300009093 Bacteria 1289
34 Ga0111539_10042579 3300009094 Bacteria 5451
35 Ga0111539_10646274 3300009094 Bacteria 1232
36 Ga0111539_10664401 3300009094 Bacteria 1213
37 Ga0105245_10182035 3300009098 Bacteria 2008
38 Ga0105248_10402474 3300009177 Bacteria 1541
39 Ga0105237_10374841 3300009545 Bacteria 1428
40 Ga0105238_10240029 3300009551 Bacteria 1790
41 Ga0105238_10314792 3300009551 Bacteria 1550
42 Ga0105238_10349388 3300009551 Bacteria 1468
43 Ga0105246_10355252 3300011119 Bacteria 1202
44 Ga0157370_10364376 3300013104 Bacteria 1332
45 Ga0157370_10376952 3300013104 Bacteria 1307
46 Ga0157378_10130033 3300013297 Bacteria 2330
47 Ga0163162_10542450 3300013306 Bacteria 1292
48 Ga0157375_10275065 3300013308 Bacteria 1846
49 Ga0157375_10576869 3300013308 Bacteria 1285
50 Ga0213874_10081633 3300021377 Bacteria 1048
51 Ga0213876_10163947 3300021384 Bacteria 1182
52 Ga0213876_10192859 3300021384 Bacteria 1083
53 Ga0207692_10164666 3300025898 Bacteria 1280
54 Ga0207710_10167622 3300025900 Bacteria 1073
55 Ga0207685_10054178 3300025905 Bacteria 1561
56 Ga0207684_10458454 3300025910 Bacteria 1094
57 Ga0207694_10282431 3300025924 Bacteria 1364
58 Ga0207694_10365128 3300025924 Bacteria 1197
59 Ga0207694_10438703 3300025924 Bacteria 1089
60 Ga0207687_10244751 3300025927 Unclassified 1423
61 Ga0207644_10355641 3300025931 Bacteria 1190
62 Ga0207670_10241887 3300025936 Bacteria 1391
63 Ga0207670_10341909 3300025936 Bacteria 1183
64 Ga0207711_10451053 3300025941 Bacteria 1197
65 Ga0207667_10645690 3300025949 Bacteria 1064
66 Ga0207703_10236475 3300026035 Bacteria 1640
67 Ga0207678_10129424 3300026067 Bacteria 2153
68 Ga0207676_10138618 3300026095 Bacteria 2079
69 Ga0207674_10175625 3300026116 Bacteria 2094
70 Ga0209371_1002381 3300027312 Bacteria 10626
71 Ga0209179_1001162 3300027512 Bacteria 3098
72 Ga0268265_10284312 3300028380 Bacteria 1481
73 Ga0268264_10070725 3300028381 Bacteria 2954
74 Ga0268256_1002113 3300030500 Bacteria 10626
75 Ga0265331_10038183 3300031250 Bacteria 2348
76 Ga0307513_10164604 3300031456 Bacteria 2104
77 Ga0307513_10327408 3300031456 Bacteria 1288
78 Ga0307516_10002631 3300031730 Bacteria 23788
79 Ga0307413_10261414 3300031824 Bacteria 1290
80 Ga0373955_0121263 3300035172 Bacteria 1520
81 Ga0373935_0249162 3300035692 Bacteria 1242
82 Ga0373933_0122321 3300035724 Bacteria 1631
83 Ga0373933_0221682 3300035724 Bacteria 1213
84 Ga0373937_0270257 3300036401 Bacteria 1604
85 Ga0436365_0125990 3300039437 Bacteria 2125
86 Ga0436365_1116542 3300039437 Bacteria 2077
87 Ga0436363_0748771 3300039450 Bacteria 1211
88 Ga0451800_0034451 3300041459 Bacteria 1362
89 Ga0451849_0029085 3300041505 Bacteria 1341
90 Ga0439452_012328 3300042010 Bacteria 2436
91 Ga0439464_0005305 3300042439 Bacteria 3328
92 Ga0439464_0038647 3300042439 Bacteria 1355
93 Ga0466968_0235666 3300044735 Bacteria 866
94 Ga0451576_0554367 3300045051 Bacteria 1207
95 Ga0495629_0013089 3300046459 Bacteria 5994
96 Ga0495639_0146974 3300046475 Bacteria 1135
97 Ga0495596_0049073 3300046500 Bacteria 1655
98 Ga0495608_0325605 3300046511 Bacteria 949
99 Ga0495620_0118395 3300046515 Bacteria 1045
100 Ga0495628_0214433 3300046516 Bacteria 1447
101 Ga0495643_0075806 3300046522 Bacteria 1759
102 Ga0495642_0161438 3300046528 Bacteria 972
103 Ga0495609_0124199 3300046538 Bacteria 1108
104 Ga0495621_0141887 3300046539 Bacteria 940
105 Ga0495597_0109930 3300046542 Bacteria 1156
106 Ga0495645_0281204 3300046543 Bacteria 1094
107 Ga0495667_0241220 3300046559 Bacteria 1151
108 Ga0495658_0106331 3300046683 Bacteria 1682
109 Ga0495624_0243324 3300046690 Bacteria 1088
110 Ga0495600_0013208 3300046809 Bacteria 5184
111 Ga0495600_0182531 3300046809 Bacteria 1352
112 Ga0495676_0158244 3300047321 Bacteria 1605
113 Ga0495675_0209395 3300047444 Bacteria 1184
114 Ga0495686_0186693 3300047472 Bacteria 1197
115 Ga0495593_0028418 3300047673 Bacteria 3071
116 Ga0495602_0141069 3300048088 Bacteria 1907
117 Ga0495614_0150193 3300048089 Bacteria 1039
118 Ga0496101_0151482 3300048904 Bacteria 1774
119 Ga0496102_0204089 3300048905 Bacteria 1863
120 Ga0496104_0322969 3300048907 Bacteria 1456
121 Ga0496105_0127431 3300048908 Bacteria 2098
122 Ga0496106_0130263 3300048909 Bacteria 1972
123 Ga0496106_0422605 3300048909 Bacteria 1071
124 Ga0496107_0140644 3300048910 Bacteria 1784
125 Ga0496107_0177904 3300048910 Bacteria 1579
126 Ga0496108_0183870 3300048911 Bacteria 1810
127 Ga0496109_0254014 3300048912 Bacteria 1655
128 Ga0496110_0038055 3300048913 Bacteria 4184
129 Ga0496110_0368139 3300048913 Bacteria 1309
130 Ga0496111_0127835 3300048914 Bacteria 1879
131 Ga0496112_0441460 3300048915 Bacteria 1239
132 Ga0496113_0210294 3300048916 Bacteria 1548
133 Ga0496113_0293829 3300048916 Bacteria 1300
134 Ga0496113_0314610 3300048916 Bacteria 1255
135 Ga0496115_0160051 3300048918 Bacteria 1860
136 Ga0496119_0128589 3300048922 Bacteria 1383
137 Ga0496121_0233528 3300048924 Bacteria 1286
138 Ga0496126_0377183 3300048929 Bacteria 1155
139 Ga0501032_0180169 3300049569 Bacteria 1383
140 Ga0501033_0023355 3300049570 Bacteria 4664
141 Ga0501033_0107980 3300049570 Bacteria 2027
142 Ga0501034_0180571 3300049571 Bacteria 2075
143 Ga0501036_0001346 3300049572 Bacteria 18843
144 Ga0501036_0049518 3300049572 Bacteria 3557
145 Ga0501037_0043212 3300049573 Bacteria 3312
146 Ga0501037_0271835 3300049573 Bacteria 1182
147 Ga0501038_0015880 3300049574 Bacteria 6840
148 Ga0501039_0001529 3300049575 Bacteria 17048
149 Ga0501041_0001382 3300049577 Bacteria 13424
150 Ga0501042_0356364 3300049578 Bacteria 1058
151 Ga0501043_0217790 3300049579 Bacteria 1478
152 Ga0501043_0321291 3300049579 Bacteria 1180
153 Ga0501043_0391718 3300049579 Bacteria 1050
154 Ga0501046_0054573 3300049580 Bacteria 3142
155 Ga0501048_0003441 3300049582 Bacteria 12024
156 Ga0501068_0005353 3300049584 Bacteria 7014
157 Ga0501069_0103373 3300049585 Bacteria 1618
158 Ga0501070_0150050 3300049586 Bacteria 1923
159 Ga0501070_0388287 3300049586 Bacteria 1130
160 Ga0501071_0020044 3300049587 Bacteria 4646
161 Ga0501072_0027930 3300049588 Bacteria 4403
162 Ga0501073_0138351 3300049589 Bacteria 1687
163 Ga0501077_0000764 3300049593 Bacteria 19429
164 Ga0501079_0119335 3300049741 Bacteria 2050
165 Ga0501080_0005449 3300049742 Bacteria 11349
166 Ga0501083_0015846 3300049744 Bacteria 5276
167 Ga0501035_0070284 3300049822 Bacteria 3101
168 Ga0501035_0098730 3300049822 Bacteria 2564
169 Ga0501035_0248404 3300049822 Bacteria 1511
170 Ga0501044_0191708 3300049823 Bacteria 2006
171 Ga0501044_0222578 3300049823 Bacteria 1837
172 Ga0501044_0284664 3300049823 Bacteria 1585
173 Ga0501045_0000477 3300049824 Bacteria 24797
174 nmdc:mga00v17_218078_c1 3300050491 Bacteria 1235
175 nmdc:mga0k408_190753_c1 3300050493 Bacteria 1223
176 nmdc:mga06z11_174951_c1 3300050494 Bacteria 1235
177 nmdc:mga09592_361289_c1 3300050508 Unclassified 1256
178 nmdc:mga0qj67_304558_c1 3300050509 Bacteria 1291
179 nmdc:mga0n895_356461_c1 3300050512 Bacteria 1481
180 nmdc:mga0a205_260235_c1 3300050515 Bacteria 1613
181 Ga0495612_0135901 3300053078 Bacteria 1064
182 Ga0500635_0074645 3300053080 Bacteria 1208
183 Ga0500651_0029701 3300053093 Bacteria 3439
184 Ga0500640_095654 3300053095 Bacteria 1236
185 Ga0500572_026913 3300053111 Bacteria 1571
186 Ga0500591_116866 3300053115 Bacteria 1104
187 Ga0500595_039542 3300053119 Bacteria 1525
188 Ga0500607_101845 3300053121 Bacteria 1424
189 Ga0500608_001746 3300053122 Bacteria 7762
190 Ga0500614_005128 3300053123 Bacteria 2750
191 Ga0500658_0129377 3300053134 Bacteria 1125
192 Ga0500559_0054902 3300053136 Bacteria 1765
193 Ga0500564_091005 3300053138 Bacteria 1357
194 Ga0500585_074781 3300053144 Bacteria 1224
195 Ga0500619_035917 3300053154 Bacteria 1540
196 Ga0500620_024774 3300053155 Bacteria 1837
197 Ga0500638_089858 3300053162 Bacteria 1447
198 Ga0500639_140519 3300053163 Bacteria 1129
199 Ga0500636_0197571 3300053177 Bacteria 1066
200 Ga0500576_077939 3300053725 Bacteria 1407
201 Ga0500657_099462 3300053728 Bacteria 1204
202 Ga0500625_020373 3300053729 Bacteria 3119
203 Ga0500645_004893 3300053730 Bacteria 5041
204 Ga0500552_007684 3300053733 Bacteria 1252
205 Ga0500596_006540 3300053735 Bacteria 1964
206 Ga0500601_010149 3300053737 Bacteria 1052
207 Ga0501084_0015400 3300054114 Bacteria 6340
208 Ga0500661_014962 3300055283 Bacteria 1393
209 Ga0501082_0000377 3300060353 Bacteria 39485
210 Ga0501082_0138640 3300060353 Bacteria 2111
211 Ga0530510_0004428 3300061734 Bacteria 9723
212 2824680775 2824679649 Bacteria 8248951
213 2889033776 2889033259 Bacteria 9099371
214 2889036160 2889033259 Bacteria 9099371
215 2889037527 2889033259 Bacteria 9099371
216 2889038146 2889033259 Bacteria 9099371
217 2889038502 2889033259 Bacteria 9099371
218 2889038909 2889033259 Bacteria 9099371
219 2889038936 2889033259 Bacteria 9099371
220 2889039961 2889033259 Bacteria 9099371
221 2889040032 2889033259 Bacteria 9099371
222 2889040033 2889033259 Bacteria 9099371
223 2889041296 2889033259 Bacteria 9099371
224 2889041315 2889033259 Bacteria 9099371
225 2889041901 2889033259 Bacteria 9099371
226 2889041911 2889033259 Bacteria 9099371
227 Ga0207708_10375215
228 JGI25404J52841_10033344
229 Ga0058692_1012456
230 JGI25405J52794_10033918
231 Ga0070690_100114316
232 Ga0070673_100308800
233 Ga0070714_100195508
234 Ga0070714_100264171
235 Ga0070701_10121850
236 Ga0070711_100405462
237 Ga0070663_100288762
238 Ga0070706_100315296
239 Ga0070699_100252699
240 Ga0070699_100338213
241 Ga0070693_100300547
242 Ga0068859_100330110
243 Ga0068864_100373073
244 Ga0068858_100322533
245 Ga0081455_10030808
246 Ga0081455_10043902
247 Ga0081540_1003260
248 Ga0081540_1095361
249 Ga0081539_10106094
250 Ga0081539_10120596
251 Ga0070715_10036191
252 Ga0070712_100147046
253 Ga0075367_10129658
254 Ga0075366_10032394
255 Ga0075430_100423460
256 Ga0075433_10409553
257 Ga0097620_100330093
258 Ga0105240_10497056
259 Ga0105240_10541658
260 Ga0111539_10042579
261 Ga0111539_10646274
262 Ga0111539_10664401
263 Ga0105245_10182035
264 Ga0105248_10402474
265 Ga0105237_10374841
266 Ga0105238_10240029
267 Ga0105238_10314792
268 Ga0105238_10349388
269 Ga0105246_10355252
270 Ga0157370_10364376
271 Ga0157370_10376952
272 Ga0157378_10130033
273 Ga0163162_10542450
274 Ga0157375_10275065
275 Ga0157375_10576869
276 Ga0213874_10081633
277 Ga0213876_10163947
278 Ga0213876_10192859
279 Ga0207692_10164666
280 Ga0207710_10167622
281 Ga0207685_10054178
282 Ga0207684_10458454
283 Ga0207694_10282431
284 Ga0207694_10365128
285 Ga0207694_10438703
286 Ga0207687_10244751
287 Ga0207644_10355641
288 Ga0207670_10241887
289 Ga0207670_10341909
290 Ga0207711_10451053
291 Ga0207667_10645690
292 Ga0207703_10236475
293 Ga0207678_10129424
294 Ga0207676_10138618
295 Ga0207674_10175625
296 Ga0209371_1002381
297 Ga0209179_1001162
298 Ga0268265_10284312
299 Ga0268264_10070725
300 Ga0268256_1002113
301 Ga0265331_10038183
302 Ga0307513_10164604
303 Ga0307513_10327408
304 Ga0307516_10002631
305 Ga0307413_10261414
306 Ga0373955_0121263
307 Ga0373935_0249162
308 Ga0373933_0122321
309 Ga0373933_0221682
310 Ga0373937_0270257
311 Ga0436365_0125990
312 Ga0436365_1116542
313 Ga0436363_0748771
314 Ga0451800_0034451
315 Ga0451849_0029085
316 Ga0439452_012328
317 Ga0439464_0005305
318 Ga0439464_0038647
319 Ga0466968_0235666
320 Ga0451576_0554367
321 Ga0495629_0013089
322 Ga0495639_0146974
323 Ga0495596_0049073
324 Ga0495608_0325605
325 Ga0495620_0118395
326 Ga0495628_0214433
327 Ga0495643_0075806
328 Ga0495642_0161438
329 Ga0495609_0124199
330 Ga0495621_0141887
331 Ga0495597_0109930
332 Ga0495645_0281204
333 Ga0495667_0241220
334 Ga0495658_0106331
335 Ga0495624_0243324
336 Ga0495600_0013208
337 Ga0495600_0182531
338 Ga0495676_0158244
339 Ga0495675_0209395
340 Ga0495686_0186693
341 Ga0495593_0028418
342 Ga0495602_0141069
343 Ga0495614_0150193
344 Ga0496101_0151482
345 Ga0496102_0204089
346 Ga0496104_0322969
347 Ga0496105_0127431
348 Ga0496106_0130263
349 Ga0496106_0422605
350 Ga0496107_0140644
351 Ga0496107_0177904
352 Ga0496108_0183870
353 Ga0496109_0254014
354 Ga0496110_0038055
355 Ga0496110_0368139
356 Ga0496111_0127835
357 Ga0496112_0441460
358 Ga0496113_0210294
359 Ga0496113_0293829
360 Ga0496113_0314610
361 Ga0496115_0160051
362 Ga0496119_0128589
363 Ga0496121_0233528
364 Ga0496126_0377183
365 Ga0501032_0180169
366 Ga0501033_0023355
367 Ga0501033_0107980
368 Ga0501034_0180571
369 Ga0501036_0001346
370 Ga0501036_0049518
371 Ga0501037_0043212
372 Ga0501037_0271835
373 Ga0501038_0015880
374 Ga0501039_0001529
375 Ga0501041_0001382
376 Ga0501042_0356364
377 Ga0501043_0217790
378 Ga0501043_0321291
379 Ga0501043_0391718
380 Ga0501046_0054573
381 Ga0501048_0003441
382 Ga0501068_0005353
383 Ga0501069_0103373
384 Ga0501070_0150050
385 Ga0501070_0388287
386 Ga0501071_0020044
387 Ga0501072_0027930
388 Ga0501073_0138351
389 Ga0501077_0000764
390 Ga0501079_0119335
391 Ga0501080_0005449
392 Ga0501083_0015846
393 Ga0501035_0070284
394 Ga0501035_0098730
395 Ga0501035_0248404
396 Ga0501044_0191708
397 Ga0501044_0222578
398 Ga0501044_0284664
399 Ga0501045_0000477
400 nmdc:mga00v17_218078_c1
401 nmdc:mga0k408_190753_c1
402 nmdc:mga06z11_174951_c1
403 nmdc:mga09592_361289_c1
404 nmdc:mga0qj67_304558_c1
405 nmdc:mga0n895_356461_c1
406 nmdc:mga0a205_260235_c1
407 Ga0495612_0135901
408 Ga0500635_0074645
409 Ga0500651_0029701
410 Ga0500640_095654
411 Ga0500572_026913
412 Ga0500591_116866
413 Ga0500595_039542
414 Ga0500607_101845
415 Ga0500608_001746
416 Ga0500614_005128
417 Ga0500658_0129377
418 Ga0500559_0054902
419 Ga0500564_091005
420 Ga0500585_074781
421 Ga0500619_035917
422 Ga0500620_024774
423 Ga0500638_089858
424 Ga0500639_140519
425 Ga0500636_0197571
426 Ga0500576_077939
427 Ga0500657_099462
428 Ga0500625_020373
429 Ga0500645_004893
430 Ga0500552_007684
431 Ga0500596_006540
432 Ga0500601_010149
433 Ga0501084_0015400
434 Ga0500661_014962
435 Ga0501082_0000377
436 Ga0501082_0138640
437 Ga0530510_0004428
438 2824680775
439 2889033776
440 2889036160
441 2889037527
442 2889038146
443 2889038502
444 2889038909
445 2889038936
446 2889039961
447 2889040032
448 2889040033
449 2889041296
450 2889041315
451 2889041901
452 2889041911

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13683

rve_3

Integrase core domain

277

343

0.98

PF13565

HTH_32

Homeodomain-like domain

82

172

0.9

PF13384

HTH_23

Homeodomain-like domain

49

99

0.89

PF00665

rve

Integrase core domain

173

289

0.88

PF13518

HTH_28

Helix-turn-helix domain

54

108

0.88

PF13011

LZ_Tnp_IS481

leucine-zipper of insertion element IS481

42

130

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pcq-assembly2.cif.gz_C crystal structure of mtbaldr (rv2779c) 0.848 74 110
2pmh-assembly1.cif.gz_A crystal structure of thr132ala of st1022 from sulfolobus tokodaii 0.8471 74 109
5cz2-assembly2.cif.gz_D crystal structure of a two-domain fragment of mmtv integrase 0.8406 129 305
5cz2-assembly1.cif.gz_B crystal structure of a two-domain fragment of mmtv integrase 0.837 129 305
2x6s-assembly2.cif.gz_D human foamy virus integrase - catalytic core. magnesium-bound structure. 0.8336 129 304
ID Description Score Start End Superfamily
1rnlA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9437 74 109 1.10.10.10
2znzF01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8924 74 109 1.10.10.10
2x48C00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8874 68 107 1.10.10.60
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8541 128 302 3.30.420.10
2efpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8532 74 109 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A171JVH4-F1-model_v4 deleted 0.9509 192 308
AF-A0A6N3RYT8-F1-model_v4 deleted 0.9486 169 316
AF-A0A2N2UMM1-F1-model_v4 Integrase catalytic domain-containing protein 0.9411 183 309 GO:0003676
GO:0015074
AF-A0A7X3I4W4-F1-model_v4 Transposase family protein 0.9411 187 307 GO:0003676
GO:0015074
AF-A0A171JW63-F1-model_v4 deleted 0.9397 192 316

Map