F338255

General Info

Members Datasets Scaffolds Average Seq Length
225 179 450 326

Family's Representative Sequence

Representative Sequence 3300049743|Ga0501081_0165998|Ga0501081_0165998_228_1346
Length 372
Sequence MGSRWFDTLPSRLDHDVAGGRVTTTSGRSGALVGNSAMGSTERPSPIPQAVAQPLPLAEVAEISARIARNIQRVIVGKPEAVHLALVTLLAEGHLLVEDVPGVGKTSLAKSLARSIGGSVSRIQFTPDLMPSDITGVSVYRRESGDFHFRAGPVFANVVIGDEINRASPKTQSALLECMAEHQVTVDGETYALATPFMVVATQNPVEMDGTYPLPEAQRDRFTARISIGYPDPAAELTVLDEHSAADPLVALRPVSDARAITGAIAGVRQVHVATDVRRYAVDLVGATRRLPEVRLGASPRATLHLVRAARAQAALAGRDFVVPDDIQLLAVPVLAHRLLLTPEAVVGRRTSAELVHGLVARVPVPRREQRG

Samples

Sample ID Description Type Environment
1 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
78 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
79 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
86 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
87 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
88 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
163 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
164 2739367653 Kocuria sp. OV113 Isolate Unclassified
165 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
166 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
167 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
168 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
169 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
170 2857727296 Kocuria sp. R-72562 Isolate Unclassified
171 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
172 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
173 2920879853 Kocuria salina CV6 Isolate Unclassified
174 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
175 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
176 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
177 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
178 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
179 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92
Metatranscriptomes 0.44
Isolates 7.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.89
Rhizosphere 81.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501081_0165998 3300049743 Bacteria 1593
2 Ga0070658_10020292 3300005327 Bacteria 5324
3 Ga0070658_10225356 3300005327 Bacteria 1586
4 Ga0068869_100127200 3300005334 Bacteria 1955
5 Ga0070682_100085838 3300005337 Bacteria 2048
6 Ga0070660_100307467 3300005339 Bacteria 1301
7 Ga0070687_100034277 3300005343 Bacteria 2512
8 Ga0070661_100370329 3300005344 Bacteria 1127
9 Ga0070671_100015500 3300005355 Bacteria 6159
10 Ga0070688_100071702 3300005365 Bacteria 2218
11 Ga0070659_100041462 3300005366 Bacteria 3598
12 Ga0070714_100134193 3300005435 Bacteria 2215
13 Ga0070708_100045714 3300005445 Bacteria 3859
14 Ga0070663_100037548 3300005455 Bacteria 3373
15 Ga0070663_100149154 3300005455 Bacteria 1792
16 Ga0070678_100160384 3300005456 Bacteria 1821
17 Ga0070681_10094515 3300005458 Bacteria 2938
18 Ga0070685_10047996 3300005466 Bacteria 2457
19 Ga0070685_10049209 3300005466 Bacteria 2430
20 Ga0070707_100006037 3300005468 Bacteria 11310
21 Ga0070699_100001550 3300005518 Bacteria 21017
22 Ga0070697_100002232 3300005536 Bacteria 14856
23 Ga0070697_100045893 3300005536 Bacteria 3542
24 Ga0070693_100103500 3300005547 Bacteria 1738
25 Ga0070665_100003626 3300005548 Bacteria 16353
26 Ga0070665_100212703 3300005548 Bacteria 1934
27 Ga0068857_100054200 3300005577 Bacteria 3558
28 Ga0068854_100073192 3300005578 Bacteria 2511
29 Ga0068854_100180297 3300005578 Bacteria 1649
30 Ga0070702_100047276 3300005615 Bacteria 2444
31 Ga0068852_100015872 3300005616 Bacteria 5857
32 Ga0068852_100125613 3300005616 Bacteria 2355
33 Ga0068859_100109901 3300005617 Bacteria 2818
34 Ga0068859_100367646 3300005617 Bacteria 1534
35 Ga0068864_100377618 3300005618 Bacteria 1342
36 Ga0068861_100027707 3300005719 Bacteria 4130
37 Ga0068863_100004549 3300005841 Bacteria 13675
38 Ga0068858_100000036 3300005842 Bacteria 138467
39 Ga0068860_100008606 3300005843 Bacteria 10172
40 Ga0081455_10150578 3300005937 Bacteria 1794
41 Ga0081539_10007586 3300005985 Bacteria 9805
42 Ga0070717_10004093 3300006028 Bacteria 10521
43 Ga0075433_10041694 3300006852 Bacteria 3978
44 Ga0097620_100109900 3300006931 Bacteria 2818
45 Ga0097620_100367628 3300006931 Bacteria 1534
46 Ga0105245_10154285 3300009098 Bacteria 2174
47 Ga0105245_10222610 3300009098 Bacteria 1822
48 Ga0105247_10000749 3300009101 Bacteria 25081
49 Ga0105247_10063852 3300009101 Bacteria 2287
50 Ga0114129_10195016 3300009147 Bacteria 2747
51 Ga0105249_10146625 3300009553 Bacteria 2268
52 Ga0105035_100297 3300009988 Bacteria 3120
53 Ga0157374_10310147 3300013296 Bacteria 1562
54 Ga0157372_10091495 3300013307 Bacteria 3460
55 Ga0157380_10037764 3300014326 Bacteria 3744
56 Ga0157379_10000062 3300014968 Bacteria 68612
57 Ga0157379_10020602 3300014968 Bacteria 5834
58 Ga0157376_10388728 3300014969 Bacteria 1346
59 Ga0213873_10000273 3300021358 Bacteria 8916
60 Ga0213876_10005157 3300021384 Bacteria 7202
61 Ga0213876_10018426 3300021384 Bacteria 3687
62 Ga0213875_10009676 3300021388 Bacteria 4869
63 Ga0213875_10017205 3300021388 Bacteria 3498
64 Ga0207710_10000012 3300025900 Bacteria 409603
65 Ga0207688_10002668 3300025901 Bacteria 9662
66 Ga0207688_10022696 3300025901 Bacteria 3436
67 Ga0207643_10010223 3300025908 Bacteria 5047
68 Ga0207657_10019188 3300025919 Bacteria 6503
69 Ga0207657_10210069 3300025919 Bacteria 1562
70 Ga0207646_10005508 3300025922 Bacteria 13306
71 Ga0207646_10024869 3300025922 Bacteria 5481
72 Ga0207681_10308710 3300025923 Bacteria 1254
73 Ga0207664_10163460 3300025929 Bacteria 1900
74 Ga0207644_10010249 3300025931 Bacteria 6176
75 Ga0207689_10012739 3300025942 Bacteria 7183
76 Ga0207689_10039700 3300025942 Bacteria 3896
77 Ga0207661_10141111 3300025944 Bacteria 2074
78 Ga0207679_10088350 3300025945 Bacteria 2389
79 Ga0207651_10101151 3300025960 Bacteria 2139
80 Ga0207668_10079924 3300025972 Bacteria 2367
81 Ga0207640_10084507 3300025981 Bacteria 2180
82 Ga0207677_10087683 3300026023 Bacteria 2254
83 Ga0207703_10000063 3300026035 Bacteria 127040
84 Ga0207703_10156507 3300026035 Bacteria 1992
85 Ga0207708_10006719 3300026075 Bacteria 8509
86 Ga0207702_10269573 3300026078 Bacteria 1605
87 Ga0207641_10002763 3300026088 Bacteria 16001
88 Ga0207641_10206373 3300026088 Bacteria 1815
89 Ga0207648_10207450 3300026089 Bacteria 1739
90 Ga0207676_10293238 3300026095 Bacteria 1482
91 Ga0207675_100013486 3300026118 Bacteria 7625
92 Ga0207683_10208424 3300026121 Bacteria 1778
93 Ga0207683_10310364 3300026121 Bacteria 1444
94 Ga0209974_10001654 3300027876 Bacteria 8061
95 Ga0268266_10097972 3300028379 Bacteria 2579
96 Ga0268264_10006109 3300028381 Bacteria 10176
97 Ga0307513_10016517 3300031456 Bacteria 8896
98 Ga0316575_10005817 3300031665 Bacteria 4407
99 Ga0316579_10041770 3300031691 Bacteria 2128
100 Ga0316576_10007885 3300031727 Bacteria 6738
101 Ga0316576_10007896 3300031727 Bacteria 6733
102 Ga0316578_10005004 3300031728 Bacteria 6356
103 Ga0316577_10014727 3300031733 Bacteria 4296
104 Ga0307406_10075324 3300031901 Bacteria 2226
105 Ga0307416_100299590 3300032002 Bacteria 1597
106 Ga0307411_10243618 3300032005 Bacteria 1409
107 Ga0316583_10001847 3300032133 Bacteria 7206
108 Ga0316585_10008466 3300032137 Bacteria 2986
109 Ga0316580_10003326 3300032139 Bacteria 4549
110 Ga0373926_0005123 3300035083 Bacteria 4307
111 Ga0373955_0041400 3300035172 Bacteria 2469
112 Ga0316574_0090568 3300035398 Bacteria 1949
113 Ga0373935_0043953 3300035692 Bacteria 2814
114 Ga0373927_0208824 3300035695 Bacteria 1282
115 Ga0373947_0143541 3300035725 Bacteria 1533
116 Ga0373937_0064603 3300036401 Bacteria 3366
117 Ga0373937_0085192 3300036401 Bacteria 2924
118 Ga0316582_0029822 3300036647 Bacteria 3316
119 Ga0316584_0035952 3300036712 Bacteria 3674
120 Ga0373925_0013418 3300037068 Bacteria 5928
121 Ga0395898_0224230 3300037466 Bacteria 1793
122 Ga0395905_0008157 3300037471 Bacteria 10344
123 Ga0316581_0015885 3300037588 Bacteria 2156
124 Ga0436364_0108735 3300037853 Bacteria 17950
125 Ga0436364_0260906 3300037853 Bacteria 21582
126 Ga0400483_112317 3300039062 Bacteria 1511
127 Ga0436365_0786499 3300039437 Bacteria 4999
128 Ga0436365_1204167 3300039437 Bacteria 6528
129 Ga0436362_0026995 3300039453 Bacteria 18702
130 Ga0466972_0006031 3300044658 Bacteria 6090
131 Ga0453683_0000093 3300044673 Bacteria 134755
132 Ga0453683_0083848 3300044673 Bacteria 1997
133 Ga0453683_0166511 3300044673 Bacteria 1395
134 Ga0466965_0087380 3300044683 Bacteria 1582
135 Ga0466966_0101242 3300044684 Bacteria 1782
136 Ga0466961_0029763 3300044693 Bacteria 3508
137 Ga0466963_0030848 3300044694 Bacteria 3462
138 Ga0453684_0015929 3300044712 Bacteria 11821
139 Ga0466971_0002125 3300044719 Bacteria 8396
140 Ga0466968_0004330 3300044735 Bacteria 5302
141 Ga0466968_0071575 3300044735 Bacteria 1510
142 Ga0466957_0009697 3300044842 Bacteria 5498
143 Ga0466957_0163876 3300044842 Bacteria 1445
144 Ga0466960_0008879 3300044901 Bacteria 4128
145 Ga0451576_0000001 3300045051 Bacteria 1802108
146 Ga0451576_0003038 3300045051 Bacteria 23663
147 Ga0451576_0079827 3300045051 Bacteria 3405
148 Ga0466958_0000375 3300045836 Bacteria 18152
149 Ga0466967_0000512 3300045976 Bacteria 18938
150 Ga0466967_0005988 3300045976 Bacteria 8537
151 Ga0466967_0517600 3300045976 Bacteria 1172
152 Ga0495592_0047223 3300046454 Bacteria 3207
153 Ga0495629_0021072 3300046459 Bacteria 4651
154 Ga0495651_0016361 3300046462 Bacteria 5743
155 Ga0495651_0101129 3300046462 Bacteria 2146
156 Ga0495653_0139432 3300046463 Bacteria 1707
157 Ga0495664_0028804 3300046477 Bacteria 3245
158 Ga0495608_0045945 3300046511 Bacteria 2908
159 Ga0495608_0067622 3300046511 Bacteria 2337
160 Ga0495630_0000720 3300046517 Bacteria 23449
161 Ga0495652_0063230 3300046529 Bacteria 3117
162 Ga0495587_0020454 3300046536 Bacteria 4086
163 Ga0495587_0045232 3300046536 Bacteria 2617
164 Ga0495587_0048528 3300046536 Bacteria 2514
165 Ga0495667_0010402 3300046559 Bacteria 6296
166 Ga0495634_0383850 3300046642 Bacteria 837
167 Ga0495588_0057120 3300046674 Bacteria 2016
168 Ga0495657_0050385 3300046675 Bacteria 2799
169 Ga0495599_0025075 3300046678 Bacteria 3732
170 Ga0495658_0069840 3300046683 Bacteria 2037
171 Ga0495581_0017759 3300047315 Bacteria 4133
172 Ga0495674_0057044 3300047319 Bacteria 3418
173 Ga0495680_0014784 3300047322 Bacteria 6747
174 Ga0495602_0037015 3300048088 Bacteria 4534
175 Ga0495602_0185267 3300048088 Bacteria 1601
176 Ga0496100_0027583 3300048903 Bacteria 3494
177 Ga0496100_0136665 3300048903 Bacteria 1732
178 Ga0496102_0000018 3300048905 Bacteria 266847
179 Ga0496103_0001801 3300048906 Bacteria 13955
180 Ga0496104_0138748 3300048907 Bacteria 2337
181 Ga0496104_0195264 3300048907 Bacteria 1936
182 Ga0496105_0043052 3300048908 Bacteria 3724
183 Ga0496105_0321535 3300048908 Bacteria 1240
184 Ga0496108_0112709 3300048911 Bacteria 2327
185 Ga0496110_0321262 3300048913 Bacteria 1410
186 Ga0496111_0151554 3300048914 Bacteria 1720
187 Ga0496116_0000235 3300048919 Bacteria 101562
188 Ga0496117_0000236 3300048920 Bacteria 104683
189 Ga0496118_0000100 3300048921 Bacteria 160138
190 Ga0496119_0004320 3300048922 Bacteria 14191
191 Ga0496119_0009532 3300048922 Bacteria 8316
192 Ga0496120_0035879 3300048923 Bacteria 2957
193 Ga0496121_0019409 3300048924 Bacteria 6797
194 Ga0496122_0151185 3300048925 Bacteria 1433
195 Ga0496124_0033648 3300048927 Bacteria 4507
196 Ga0496125_0046846 3300048928 Bacteria 3622
197 Ga0496126_0000327 3300048929 Bacteria 101544
198 Ga0496126_0072436 3300048929 Bacteria 3065
199 Ga0496126_0248253 3300048929 Bacteria 1484
200 Ga0501310_000015 3300049130 Bacteria 16736
201 Ga0501039_0196342 3300049575 Bacteria 1587
202 Ga0501040_0000001 3300049576 Archaea 156785
203 Ga0501040_0251018 3300049576 Bacteria 1262
204 nmdc:mga05p37_173165_c1 3300050507 Bacteria 2631
205 nmdc:mga08y16_329063_c1 3300050511 Bacteria 1572
206 nmdc:mga08y16_42482_c1 3300050511 Bacteria 4761
207 nmdc:mga0a205_74701_c1 3300050515 Bacteria 3275
208 Ga0495595_0001069 3300053084 Bacteria 10602
209 2729906108 2728369276 Bacteria 5610032
210 2739603922 2739367653 Bacteria 2780952
211 2784471899 2784132109 Bacteria 3141763
212 2808871425 2808606364 Bacteria 4465927
213 2816504213 2816332139 Bacteria 9138787
214 2817509655 2816332305 Bacteria 2697803
215 2837183213 2837183177 Bacteria 4637169
216 2857728447 2857727296 Bacteria 2745552
217 2881649107 2881644220 Bacteria 5302661
218 2887447542 2887443736 Bacteria 4426037
219 2920883486 2920879853 Bacteria 4216831
220 3001271824 3001267043 Bacteria 4823521
221 3001276962 3001272096 Bacteria 4729684
222 3006973617 3006969106 Bacteria 4739423
223 3006988121 3006984091 Bacteria 4207523
224 3006992754 3006988479 Bacteria 4767936
225 8054476782 8054472261 Bacteria 7464355
226 Ga0501081_0165998
227 Ga0070658_10020292
228 Ga0070658_10225356
229 Ga0068869_100127200
230 Ga0070682_100085838
231 Ga0070660_100307467
232 Ga0070687_100034277
233 Ga0070661_100370329
234 Ga0070671_100015500
235 Ga0070688_100071702
236 Ga0070659_100041462
237 Ga0070714_100134193
238 Ga0070708_100045714
239 Ga0070663_100037548
240 Ga0070663_100149154
241 Ga0070678_100160384
242 Ga0070681_10094515
243 Ga0070685_10047996
244 Ga0070685_10049209
245 Ga0070707_100006037
246 Ga0070699_100001550
247 Ga0070697_100002232
248 Ga0070697_100045893
249 Ga0070693_100103500
250 Ga0070665_100003626
251 Ga0070665_100212703
252 Ga0068857_100054200
253 Ga0068854_100073192
254 Ga0068854_100180297
255 Ga0070702_100047276
256 Ga0068852_100015872
257 Ga0068852_100125613
258 Ga0068859_100109901
259 Ga0068859_100367646
260 Ga0068864_100377618
261 Ga0068861_100027707
262 Ga0068863_100004549
263 Ga0068858_100000036
264 Ga0068860_100008606
265 Ga0081455_10150578
266 Ga0081539_10007586
267 Ga0070717_10004093
268 Ga0075433_10041694
269 Ga0097620_100109900
270 Ga0097620_100367628
271 Ga0105245_10154285
272 Ga0105245_10222610
273 Ga0105247_10000749
274 Ga0105247_10063852
275 Ga0114129_10195016
276 Ga0105249_10146625
277 Ga0105035_100297
278 Ga0157374_10310147
279 Ga0157372_10091495
280 Ga0157380_10037764
281 Ga0157379_10000062
282 Ga0157379_10020602
283 Ga0157376_10388728
284 Ga0213873_10000273
285 Ga0213876_10005157
286 Ga0213876_10018426
287 Ga0213875_10009676
288 Ga0213875_10017205
289 Ga0207710_10000012
290 Ga0207688_10002668
291 Ga0207688_10022696
292 Ga0207643_10010223
293 Ga0207657_10019188
294 Ga0207657_10210069
295 Ga0207646_10005508
296 Ga0207646_10024869
297 Ga0207681_10308710
298 Ga0207664_10163460
299 Ga0207644_10010249
300 Ga0207689_10012739
301 Ga0207689_10039700
302 Ga0207661_10141111
303 Ga0207679_10088350
304 Ga0207651_10101151
305 Ga0207668_10079924
306 Ga0207640_10084507
307 Ga0207677_10087683
308 Ga0207703_10000063
309 Ga0207703_10156507
310 Ga0207708_10006719
311 Ga0207702_10269573
312 Ga0207641_10002763
313 Ga0207641_10206373
314 Ga0207648_10207450
315 Ga0207676_10293238
316 Ga0207675_100013486
317 Ga0207683_10208424
318 Ga0207683_10310364
319 Ga0209974_10001654
320 Ga0268266_10097972
321 Ga0268264_10006109
322 Ga0307513_10016517
323 Ga0316575_10005817
324 Ga0316579_10041770
325 Ga0316576_10007885
326 Ga0316576_10007896
327 Ga0316578_10005004
328 Ga0316577_10014727
329 Ga0307406_10075324
330 Ga0307416_100299590
331 Ga0307411_10243618
332 Ga0316583_10001847
333 Ga0316585_10008466
334 Ga0316580_10003326
335 Ga0373926_0005123
336 Ga0373955_0041400
337 Ga0316574_0090568
338 Ga0373935_0043953
339 Ga0373927_0208824
340 Ga0373947_0143541
341 Ga0373937_0064603
342 Ga0373937_0085192
343 Ga0316582_0029822
344 Ga0316584_0035952
345 Ga0373925_0013418
346 Ga0395898_0224230
347 Ga0395905_0008157
348 Ga0316581_0015885
349 Ga0436364_0108735
350 Ga0436364_0260906
351 Ga0400483_112317
352 Ga0436365_0786499
353 Ga0436365_1204167
354 Ga0436362_0026995
355 Ga0466972_0006031
356 Ga0453683_0000093
357 Ga0453683_0083848
358 Ga0453683_0166511
359 Ga0466965_0087380
360 Ga0466966_0101242
361 Ga0466961_0029763
362 Ga0466963_0030848
363 Ga0453684_0015929
364 Ga0466971_0002125
365 Ga0466968_0004330
366 Ga0466968_0071575
367 Ga0466957_0009697
368 Ga0466957_0163876
369 Ga0466960_0008879
370 Ga0451576_0000001
371 Ga0451576_0003038
372 Ga0451576_0079827
373 Ga0466958_0000375
374 Ga0466967_0000512
375 Ga0466967_0005988
376 Ga0466967_0517600
377 Ga0495592_0047223
378 Ga0495629_0021072
379 Ga0495651_0016361
380 Ga0495651_0101129
381 Ga0495653_0139432
382 Ga0495664_0028804
383 Ga0495608_0045945
384 Ga0495608_0067622
385 Ga0495630_0000720
386 Ga0495652_0063230
387 Ga0495587_0020454
388 Ga0495587_0045232
389 Ga0495587_0048528
390 Ga0495667_0010402
391 Ga0495634_0383850
392 Ga0495588_0057120
393 Ga0495657_0050385
394 Ga0495599_0025075
395 Ga0495658_0069840
396 Ga0495581_0017759
397 Ga0495674_0057044
398 Ga0495680_0014784
399 Ga0495602_0037015
400 Ga0495602_0185267
401 Ga0496100_0027583
402 Ga0496100_0136665
403 Ga0496102_0000018
404 Ga0496103_0001801
405 Ga0496104_0138748
406 Ga0496104_0195264
407 Ga0496105_0043052
408 Ga0496105_0321535
409 Ga0496108_0112709
410 Ga0496110_0321262
411 Ga0496111_0151554
412 Ga0496116_0000235
413 Ga0496117_0000236
414 Ga0496118_0000100
415 Ga0496119_0004320
416 Ga0496119_0009532
417 Ga0496120_0035879
418 Ga0496121_0019409
419 Ga0496122_0151185
420 Ga0496124_0033648
421 Ga0496125_0046846
422 Ga0496126_0000327
423 Ga0496126_0072436
424 Ga0496126_0248253
425 Ga0501310_000015
426 Ga0501039_0196342
427 Ga0501040_0000001
428 Ga0501040_0251018
429 nmdc:mga05p37_173165_c1
430 nmdc:mga08y16_329063_c1
431 nmdc:mga08y16_42482_c1
432 nmdc:mga0a205_74701_c1
433 Ga0495595_0001069
434 2729906108
435 2739603922
436 2784471899
437 2808871425
438 2816504213
439 2817509655
440 2837183213
441 2857728447
442 2881649107
443 2887447542
444 2920883486
445 3001271824
446 3001276962
447 3006973617
448 3006988121
449 3006992754
450 8054476782

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

94

224

0.99

PF07728

AAA_5

AAA domain (dynein-related subfamily)

94

222

0.94

PF17863

AAA_lid_2

AAA lid domain

286

359

0.91

PF20030

bpMoxR

MoxR domain in the MoxR-vWA-beta-propeller ternary systems

61

248

0.85

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

95

230

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9064 17 317
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.8455 17 317
6q7m-assembly1.cif.gz_Z spiral structure of e. coli rava in the rava-ldci cage-like complex 0.7674 18 310
3nbx-assembly1.cif.gz_X crystal structure of e. coli rava (regulatory atpase variant a) in complex with adp 0.7607 18 310
4upb-assembly1.cif.gz_C electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.7556 18 310
ID Description Score Start End Superfamily
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9846 220 311 1.10.8.80
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9839 220 312 1.10.8.80
2r44A03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9505 221 312 1.10.8.80
1g8pA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9358 221 313 1.10.8.80
af_I1MEQ1_333_420_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9274 221 313 1.10.8.80
ID Description Score Start End GO Terms
AF-A0A7X5N5M0-F1-model_v4 AAA family ATPase 0.9945 80 153 GO:0005524
GO:0016887
AF-A0A725B6T5-F1-model_v4 AAA family ATPase 0.9922 229 317
AF-A0A3D4CJH3-F1-model_v4 Magnesium chelatase 0.9872 82 164 GO:0005524
GO:0016887
AF-A0A3C0XYP9-F1-model_v4 ChlI/MoxR AAA lid domain-containing protein 0.987 222 318
AF-A0A166T7R7-F1-model_v4 ChlI/MoxR AAA lid domain-containing protein 0.9856 220 316

Map