F338073

General Info

Members Datasets Scaffolds Average Seq Length
225 131 450 597

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0026170|Ga0466963_0026170_1441_3465
Length 674
Sequence MTKCVNLFRWPGAKSRKSGTSHETALNIILSGHSSGKVCHLRMLAVADSDERTRVSALTWRNSAFIKYPLFLALLLACCSDGSAQNPVKGLLLPETESNYQVHPYEGKLAPDDGQWVRPAKDYASTRYSSLDQINTSNAKNLKVAFTFSTGLTHGHEAAPLVVNNTMYIVTPWPNNLYALDLTKPGAPLKWVYKPAPTPAAKGVACCDLVNRGGVYDNGRIFYNTLDDQTVAVDANTGKEVWKVRLGDINKGESITMAPLAVKGKILVGNSGGEFGIHGWLTALDEGTGKIAWRAYNTGPDKDVLIGPRFKPFYAKDRGQDLGVKTWPPEAWKIGGAGVWGWISYDPELNLVYYGTANPGPWDADVRPGDNHFSSGIFARDPDNGEAVWYYQFSPHDLYDYDAVNENILLDLPINGQTRKIVLHPERNGYVYVMDRTTGEVLSAKPFVPITTTRGVDLKTGELQYVPEKTPVTGKVVRNLCPTAPGAKDWQPSAFSARTGLLYIPHQLLCMDKEDVTPNYIAGTPYVGSNVRMYNAPPGDHGGEMMAWDPLEGKIVWSIPDKFPVWSGALATAGDVVFYGTLEGWFRAVDAINGKVLWEFKTGSGIIGQPITYKGPDGKQYVAILSGIGGWAGAVVSAGLDTRDQTGALGFTGAVQELPKYSTAGGMLYVFSLP

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
122 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
123 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
130 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.11
Metatranscriptomes 0.44
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 4.89
Rhizosphere 88.89
Stem 0
Stem Tuber 0
Unclassified 4.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0026170 3300044694 Bacteria 3730
2 LJNas_1000188 3300000546 Bacteria 10398
3 JGI25406J46586_10004729 3300003203 Bacteria 6336
4 JGI25406J46586_10020157 3300003203 Bacteria 2702
5 Ga0070683_100032001 3300005329 Bacteria 4787
6 Ga0070683_100040037 3300005329 Bacteria 4306
7 Ga0070683_100098459 3300005329 Bacteria 2752
8 Ga0070670_100067395 3300005331 Bacteria 3071
9 Ga0070682_100002135 3300005337 Bacteria 10983
10 Ga0068868_100015303 3300005338 Bacteria 5671
11 Ga0070660_100052640 3300005339 Bacteria 3139
12 Ga0070660_100136057 3300005339 Bacteria 1969
13 Ga0070692_10029040 3300005345 Bacteria 2754
14 Ga0070673_100045584 3300005364 Bacteria 3401
15 Ga0070709_10062939 3300005434 Bacteria 2367
16 Ga0070714_100031098 3300005435 Bacteria 4450
17 Ga0070714_100036097 3300005435 Bacteria 4144
18 Ga0070714_100045021 3300005435 Bacteria 3738
19 Ga0070705_100000211 3300005440 Bacteria 34540
20 Ga0070705_100015599 3300005440 Bacteria 3932
21 Ga0070700_100018414 3300005441 Bacteria 4015
22 Ga0070694_100002769 3300005444 Bacteria 10403
23 Ga0070694_100003527 3300005444 Bacteria 9353
24 Ga0070663_100019565 3300005455 Bacteria 4466
25 Ga0070662_100000208 3300005457 Bacteria 34180
26 Ga0070681_10000764 3300005458 Bacteria 26712
27 Ga0070681_10037909 3300005458 Bacteria 4834
28 Ga0068867_100007014 3300005459 Bacteria 7962
29 Ga0070679_100001313 3300005530 Bacteria 21907
30 Ga0070679_100076407 3300005530 Bacteria 3339
31 Ga0070684_100035512 3300005535 Bacteria 4266
32 Ga0070684_100149324 3300005535 Bacteria 2116
33 Ga0068853_100021164 3300005539 Bacteria 5417
34 Ga0068853_100026981 3300005539 Bacteria 4826
35 Ga0070695_100000045 3300005545 Bacteria 47391
36 Ga0070696_100004139 3300005546 Bacteria 9670
37 Ga0070665_100033749 3300005548 Bacteria 5147
38 Ga0068855_100001230 3300005563 Bacteria 31780
39 Ga0068855_100020304 3300005563 Bacteria 7970
40 Ga0068855_100022864 3300005563 Bacteria 7494
41 Ga0068855_100052255 3300005563 Bacteria 4811
42 Ga0070664_100007080 3300005564 Bacteria 9050
43 Ga0070664_100069084 3300005564 Bacteria 3022
44 Ga0070664_100117961 3300005564 Bacteria 2321
45 Ga0068856_100009350 3300005614 Bacteria 9520
46 Ga0068856_100044604 3300005614 Bacteria 4364
47 Ga0068856_100101557 3300005614 Bacteria 2869
48 Ga0068852_100000004 3300005616 Bacteria 179746
49 Ga0068852_100031039 3300005616 Unclassified 4404
50 Ga0068852_100031897 3300005616 Bacteria 4356
51 Ga0068852_100076498 3300005616 Bacteria 2955
52 Ga0068859_100137686 3300005617 Bacteria 2515
53 Ga0068864_100027732 3300005618 Bacteria 4785
54 Ga0081539_10004372 3300005985 Bacteria 15727
55 Ga0097620_100137689 3300006931 Bacteria 2515
56 Ga0105240_10000111 3300009093 Bacteria 171005
57 Ga0105240_10004112 3300009093 Bacteria 22330
58 Ga0105240_10018448 3300009093 Bacteria 9368
59 Ga0105240_10027658 3300009093 Bacteria 7422
60 Ga0105240_10055059 3300009093 Bacteria 4981
61 Ga0105240_10102726 3300009093 Unclassified 3473
62 Ga0105240_10133667 3300009093 Bacteria 2972
63 Ga0111539_10129677 3300009094 Bacteria 2953
64 Ga0114129_10045226 3300009147 Bacteria 6189
65 Ga0105243_10033899 3300009148 Bacteria 3949
66 Ga0105241_10021571 3300009174 Bacteria 4763
67 Ga0105237_10000199 3300009545 Bacteria 85277
68 Ga0105237_10074181 3300009545 Bacteria 3394
69 Ga0105237_10107619 3300009545 Bacteria 2780
70 Ga0105237_10110331 3300009545 Bacteria 2743
71 Ga0105238_10013666 3300009551 Bacteria 8198
72 Ga0105238_10034523 3300009551 Bacteria 5145
73 Ga0105238_10034602 3300009551 Bacteria 5140
74 Ga0105238_10055908 3300009551 Bacteria 3960
75 Ga0105238_10069092 3300009551 Unclassified 3533
76 Ga0157370_10000016 3300013104 Bacteria 179999
77 Ga0157370_10051260 3300013104 Bacteria 3942
78 Ga0157369_10000287 3300013105 Bacteria 67638
79 Ga0157369_10009827 3300013105 Bacteria 10935
80 Ga0157369_10013325 3300013105 Bacteria 9298
81 Ga0157369_10036371 3300013105 Bacteria 5395
82 Ga0157369_10045882 3300013105 Bacteria 4751
83 Ga0157369_10072965 3300013105 Bacteria 3683
84 Ga0157374_10014865 3300013296 Bacteria 6820
85 Ga0157374_10015321 3300013296 Bacteria 6724
86 Ga0157378_10035647 3300013297 Bacteria 4401
87 Ga0163162_10051279 3300013306 Bacteria 4140
88 Ga0157372_10000036 3300013307 Bacteria 172504
89 Ga0157372_10005633 3300013307 Bacteria 13317
90 Ga0157372_10015189 3300013307 Bacteria 8244
91 Ga0157372_10023317 3300013307 Bacteria 6708
92 Ga0157372_10044618 3300013307 Bacteria 4913
93 Ga0157372_10093387 3300013307 Bacteria 3424
94 Ga0157372_10132445 3300013307 Unclassified 2869
95 Ga0157372_10215441 3300013307 Bacteria 2226
96 Ga0163163_10080022 3300014325 Bacteria 3267
97 Ga0182008_10001525 3300014497 Bacteria 15417
98 Ga0182008_10005994 3300014497 Bacteria 6842
99 Ga0157376_10014454 3300014969 Bacteria 5928
100 Ga0182007_10001070 3300015262 Bacteria 14923
101 Ga0213874_10014779 3300021377 Bacteria 2047
102 Ga0213876_10017073 3300021384 Unclassified 3834
103 Ga0213875_10000015 3300021388 Bacteria 280499
104 Ga0209759_1000636 3300025256 Bacteria 32763
105 Ga0207656_10002075 3300025321 Bacteria 6694
106 Ga0207653_10015434 3300025885 Bacteria 2397
107 Ga0207707_10005080 3300025912 Bacteria 11539
108 Ga0207707_10021338 3300025912 Bacteria 5662
109 Ga0207695_10000050 3300025913 Bacteria 405727
110 Ga0207695_10004249 3300025913 Bacteria 19677
111 Ga0207695_10058688 3300025913 Bacteria 3994
112 Ga0207695_10081422 3300025913 Bacteria 3276
113 Ga0207695_10149690 3300025913 Unclassified 2274
114 Ga0207671_10001814 3300025914 Bacteria 23845
115 Ga0207657_10001244 3300025919 Bacteria 27213
116 Ga0207694_10018947 3300025924 Bacteria 5203
117 Ga0207694_10019027 3300025924 Bacteria 5190
118 Ga0207650_10010478 3300025925 Bacteria 6357
119 Ga0207706_10000157 3300025933 Bacteria 75435
120 Ga0207706_10009605 3300025933 Bacteria 8879
121 Ga0207706_10121335 3300025933 Bacteria 2298
122 Ga0207661_10023903 3300025944 Bacteria 4623
123 Ga0207667_10002232 3300025949 Bacteria 24328
124 Ga0207667_10006221 3300025949 Bacteria 14485
125 Ga0207667_10013622 3300025949 Bacteria 9295
126 Ga0207667_10016375 3300025949 Bacteria 8380
127 Ga0207639_10050401 3300026041 Unclassified 3162
128 Ga0207708_10031590 3300026075 Bacteria 4020
129 Ga0207702_10012726 3300026078 Bacteria 7001
130 Ga0207702_10114020 3300026078 Bacteria 2408
131 Ga0207698_10000008 3300026142 Bacteria 281991
132 Ga0207698_10023621 3300026142 Bacteria 4298
133 Ga0265356_1000632 3300028017 Bacteria 6154
134 Ga0307408_100030207 3300031548 Bacteria 3762
135 Ga0307408_100051344 3300031548 Bacteria 2970
136 Ga0307408_100067277 3300031548 Bacteria 2634
137 Ga0307408_100070653 3300031548 Bacteria 2578
138 Ga0307405_10016871 3300031731 Bacteria 3993
139 Ga0307405_10044197 3300031731 Bacteria 2723
140 Ga0307413_10040493 3300031824 Bacteria 2719
141 Ga0307410_10001176 3300031852 Bacteria 11554
142 Ga0307410_10033028 3300031852 Bacteria 3337
143 Ga0307410_10050367 3300031852 Bacteria 2800
144 Ga0307406_10011274 3300031901 Bacteria 5069
145 Ga0307406_10050109 3300031901 Bacteria 2645
146 Ga0307407_10011079 3300031903 Bacteria 4278
147 Ga0307412_10028548 3300031911 Bacteria 3492
148 Ga0307409_100006284 3300031995 Bacteria 6961
149 Ga0307416_100000945 3300032002 Bacteria 15381
150 Ga0307416_100027184 3300032002 Bacteria 4232
151 Ga0307416_100033746 3300032002 Bacteria 3884
152 Ga0307416_100074548 3300032002 Bacteria 2836
153 Ga0307414_10010078 3300032004 Bacteria 5462
154 Ga0307411_10092164 3300032005 Bacteria 2118
155 Ga0307415_100018785 3300032126 Bacteria 4183
156 Ga0373923_0004829 3300035111 Bacteria 4513
157 Ga0373936_0001050 3300035113 Bacteria 9871
158 Ga0373943_0000630 3300035170 Bacteria 15259
159 Ga0373935_0000646 3300035692 Bacteria 18364
160 Ga0373927_0000039 3300035695 Bacteria 98319
161 Ga0373933_0035691 3300035724 Bacteria 2906
162 Ga0373947_0000389 3300035725 Bacteria 24812
163 Ga0373925_0000686 3300037068 Bacteria 31761
164 Ga0373925_0019603 3300037068 Bacteria 4922
165 Ga0395899_0001450 3300037312 Bacteria 20237
166 Ga0395900_0018397 3300037418 Bacteria 7125
167 Ga0395900_0165262 3300037418 Bacteria 2255
168 Ga0395898_0001815 3300037466 Bacteria 27567
169 Ga0395898_0179839 3300037466 Bacteria 2021
170 Ga0395905_0000047 3300037471 Bacteria 237582
171 Ga0395905_0016105 3300037471 Bacteria 7107
172 Ga0395905_0018136 3300037471 Bacteria 6679
173 Ga0436364_0814498 3300037853 Bacteria 116488
174 Ga0436364_0890661 3300037853 Bacteria 1898
175 Ga0395901_0126066 3300038443 Bacteria 2691
176 Ga0436365_0123567 3300039437 Bacteria 19259
177 Ga0436365_0913313 3300039437 Bacteria 6559
178 Ga0436365_1290444 3300039437 Bacteria 7334
179 Ga0436365_1559119 3300039437 Bacteria 2300
180 Ga0436365_1902004 3300039437 Bacteria 24720
181 Ga0436360_1104132 3300039438 Bacteria 12819
182 Ga0436361_0675176 3300039447 Bacteria 10615
183 Ga0436361_0906592 3300039447 Bacteria 6026
184 Ga0436363_1344605 3300039450 Bacteria 6241
185 Ga0436362_0296395 3300039453 Bacteria 6105
186 Ga0466969_0004871 3300044656 Bacteria 7150
187 Ga0466969_0016088 3300044656 Bacteria 3919
188 Ga0466966_0002771 3300044684 Bacteria 11520
189 Ga0466966_0022391 3300044684 Bacteria 4147
190 Ga0466961_0021077 3300044693 Bacteria 4195
191 Ga0466961_0075673 3300044693 Bacteria 2134
192 Ga0466963_0001208 3300044694 Bacteria 13597
193 Ga0466957_0000487 3300044842 Bacteria 19773
194 Ga0466959_0042587 3300045049 Bacteria 3348
195 Ga0466967_0000869 3300045976 Bacteria 16105
196 Ga0466967_0016939 3300045976 Bacteria 5764
197 Ga0466967_0037468 3300045976 Bacteria 4150
198 Ga0466967_0060865 3300045976 Bacteria 3348
199 Ga0495664_0005134 3300046477 Bacteria 7183
200 Ga0495674_0001645 3300047319 Bacteria 21966
201 Ga0496101_0031372 3300048904 Unclassified 3735
202 Ga0496101_0081220 3300048904 Bacteria 2397
203 Ga0496101_0103278 3300048904 Bacteria 2136
204 Ga0496102_0061837 3300048905 Bacteria 3428
205 Ga0496105_0057847 3300048908 Unclassified 3201
206 Ga0496111_0037202 3300048914 Bacteria 3483
207 Ga0496112_0051636 3300048915 Unclassified 4033
208 Ga0496113_0074746 3300048916 Bacteria 2584
209 Ga0496114_0011099 3300048917 Bacteria 7190
210 Ga0496115_0018417 3300048918 Bacteria 5361
211 Ga0496115_0023084 3300048918 Bacteria 4826
212 Ga0501038_0036770 3300049574 Bacteria 4297
213 Ga0501073_0001396 3300049589 Bacteria 17811
214 Ga0501075_0007883 3300049591 Bacteria 7393
215 Ga0501217_001589 3300049661 Bacteria 4297
216 Ga0501223_002437 3300049663 Bacteria 4132
217 Ga0501257_007713 3300049686 Bacteria 2407
218 Ga0501081_0082458 3300049743 Bacteria 2253
219 Ga0501044_0087488 3300049823 Bacteria 3147
220 Ga0501045_0012468 3300049824 Bacteria 5986
221 nmdc:mga05p37_62492_c1 3300050507 Bacteria 4583
222 nmdc:mga0n895_130762_c1 3300050512 Bacteria 2535
223 Ga0500622_0005869 3300053156 Bacteria 7258
224 Ga0587082_000619 3300059504 Bacteria 3144
225 8001526813 8001522603 Bacteria 4726425
226 Ga0466963_0026170
227 LJNas_1000188
228 JGI25406J46586_10004729
229 JGI25406J46586_10020157
230 Ga0070683_100032001
231 Ga0070683_100040037
232 Ga0070683_100098459
233 Ga0070670_100067395
234 Ga0070682_100002135
235 Ga0068868_100015303
236 Ga0070660_100052640
237 Ga0070660_100136057
238 Ga0070692_10029040
239 Ga0070673_100045584
240 Ga0070709_10062939
241 Ga0070714_100031098
242 Ga0070714_100036097
243 Ga0070714_100045021
244 Ga0070705_100000211
245 Ga0070705_100015599
246 Ga0070700_100018414
247 Ga0070694_100002769
248 Ga0070694_100003527
249 Ga0070663_100019565
250 Ga0070662_100000208
251 Ga0070681_10000764
252 Ga0070681_10037909
253 Ga0068867_100007014
254 Ga0070679_100001313
255 Ga0070679_100076407
256 Ga0070684_100035512
257 Ga0070684_100149324
258 Ga0068853_100021164
259 Ga0068853_100026981
260 Ga0070695_100000045
261 Ga0070696_100004139
262 Ga0070665_100033749
263 Ga0068855_100001230
264 Ga0068855_100020304
265 Ga0068855_100022864
266 Ga0068855_100052255
267 Ga0070664_100007080
268 Ga0070664_100069084
269 Ga0070664_100117961
270 Ga0068856_100009350
271 Ga0068856_100044604
272 Ga0068856_100101557
273 Ga0068852_100000004
274 Ga0068852_100031039
275 Ga0068852_100031897
276 Ga0068852_100076498
277 Ga0068859_100137686
278 Ga0068864_100027732
279 Ga0081539_10004372
280 Ga0097620_100137689
281 Ga0105240_10000111
282 Ga0105240_10004112
283 Ga0105240_10018448
284 Ga0105240_10027658
285 Ga0105240_10055059
286 Ga0105240_10102726
287 Ga0105240_10133667
288 Ga0111539_10129677
289 Ga0114129_10045226
290 Ga0105243_10033899
291 Ga0105241_10021571
292 Ga0105237_10000199
293 Ga0105237_10074181
294 Ga0105237_10107619
295 Ga0105237_10110331
296 Ga0105238_10013666
297 Ga0105238_10034523
298 Ga0105238_10034602
299 Ga0105238_10055908
300 Ga0105238_10069092
301 Ga0157370_10000016
302 Ga0157370_10051260
303 Ga0157369_10000287
304 Ga0157369_10009827
305 Ga0157369_10013325
306 Ga0157369_10036371
307 Ga0157369_10045882
308 Ga0157369_10072965
309 Ga0157374_10014865
310 Ga0157374_10015321
311 Ga0157378_10035647
312 Ga0163162_10051279
313 Ga0157372_10000036
314 Ga0157372_10005633
315 Ga0157372_10015189
316 Ga0157372_10023317
317 Ga0157372_10044618
318 Ga0157372_10093387
319 Ga0157372_10132445
320 Ga0157372_10215441
321 Ga0163163_10080022
322 Ga0182008_10001525
323 Ga0182008_10005994
324 Ga0157376_10014454
325 Ga0182007_10001070
326 Ga0213874_10014779
327 Ga0213876_10017073
328 Ga0213875_10000015
329 Ga0209759_1000636
330 Ga0207656_10002075
331 Ga0207653_10015434
332 Ga0207707_10005080
333 Ga0207707_10021338
334 Ga0207695_10000050
335 Ga0207695_10004249
336 Ga0207695_10058688
337 Ga0207695_10081422
338 Ga0207695_10149690
339 Ga0207671_10001814
340 Ga0207657_10001244
341 Ga0207694_10018947
342 Ga0207694_10019027
343 Ga0207650_10010478
344 Ga0207706_10000157
345 Ga0207706_10009605
346 Ga0207706_10121335
347 Ga0207661_10023903
348 Ga0207667_10002232
349 Ga0207667_10006221
350 Ga0207667_10013622
351 Ga0207667_10016375
352 Ga0207639_10050401
353 Ga0207708_10031590
354 Ga0207702_10012726
355 Ga0207702_10114020
356 Ga0207698_10000008
357 Ga0207698_10023621
358 Ga0265356_1000632
359 Ga0307408_100030207
360 Ga0307408_100051344
361 Ga0307408_100067277
362 Ga0307408_100070653
363 Ga0307405_10016871
364 Ga0307405_10044197
365 Ga0307413_10040493
366 Ga0307410_10001176
367 Ga0307410_10033028
368 Ga0307410_10050367
369 Ga0307406_10011274
370 Ga0307406_10050109
371 Ga0307407_10011079
372 Ga0307412_10028548
373 Ga0307409_100006284
374 Ga0307416_100000945
375 Ga0307416_100027184
376 Ga0307416_100033746
377 Ga0307416_100074548
378 Ga0307414_10010078
379 Ga0307411_10092164
380 Ga0307415_100018785
381 Ga0373923_0004829
382 Ga0373936_0001050
383 Ga0373943_0000630
384 Ga0373935_0000646
385 Ga0373927_0000039
386 Ga0373933_0035691
387 Ga0373947_0000389
388 Ga0373925_0000686
389 Ga0373925_0019603
390 Ga0395899_0001450
391 Ga0395900_0018397
392 Ga0395900_0165262
393 Ga0395898_0001815
394 Ga0395898_0179839
395 Ga0395905_0000047
396 Ga0395905_0016105
397 Ga0395905_0018136
398 Ga0436364_0814498
399 Ga0436364_0890661
400 Ga0395901_0126066
401 Ga0436365_0123567
402 Ga0436365_0913313
403 Ga0436365_1290444
404 Ga0436365_1559119
405 Ga0436365_1902004
406 Ga0436360_1104132
407 Ga0436361_0675176
408 Ga0436361_0906592
409 Ga0436363_1344605
410 Ga0436362_0296395
411 Ga0466969_0004871
412 Ga0466969_0016088
413 Ga0466966_0002771
414 Ga0466966_0022391
415 Ga0466961_0021077
416 Ga0466961_0075673
417 Ga0466963_0001208
418 Ga0466957_0000487
419 Ga0466959_0042587
420 Ga0466967_0000869
421 Ga0466967_0016939
422 Ga0466967_0037468
423 Ga0466967_0060865
424 Ga0495664_0005134
425 Ga0495674_0001645
426 Ga0496101_0031372
427 Ga0496101_0081220
428 Ga0496101_0103278
429 Ga0496102_0061837
430 Ga0496105_0057847
431 Ga0496111_0037202
432 Ga0496112_0051636
433 Ga0496113_0074746
434 Ga0496114_0011099
435 Ga0496115_0018417
436 Ga0496115_0023084
437 Ga0501038_0036770
438 Ga0501073_0001396
439 Ga0501075_0007883
440 Ga0501217_001589
441 Ga0501223_002437
442 Ga0501257_007713
443 Ga0501081_0082458
444 Ga0501044_0087488
445 Ga0501045_0012468
446 nmdc:mga05p37_62492_c1
447 nmdc:mga0n895_130762_c1
448 Ga0500622_0005869
449 Ga0587082_000619
450 8001526813

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13570

PQQ_3

PQQ-like domain

553

593

0.97

PF01011

PQQ

PQQ enzyme repeat

575

612

0.95

PF01011

PQQ

PQQ enzyme repeat

219

256

0.87

PF13360

PQQ_2

PQQ-like domain

541

616

0.84

PF13360

PQQ_2

PQQ-like domain

201

321

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fkw-assembly2.cif.gz_B europium-containing methanol dehydrogenase 0.9726 60 622
7o6z-assembly1.cif.gz_A structure of a neodymium-containing, xoxf1-type methanol dehydrogenase 0.9639 64 621
7cdl-assembly2.cif.gz_D holo-methanol dehydrogenase (mdh) with cys131-cys132 reduced from methylococcus capsulatus (bath) 0.963 62 622
1h4i-assembly1.cif.gz_A methylobacterium extorquens methanol dehydrogenase 0.963 62 622
1lrw-assembly1.cif.gz_A crystal structure of methanol dehydrogenase from p. denitrificans 0.9617 62 622
ID Description Score Start End Superfamily
4tqoD00 Mainly Beta;8 Propeller;Methanol Dehydrogenase; Chain A;Quinoprotein alcohol dehydrogenase-like superfamily 0.9642 62 622 2.140.10.10
2ymsB00 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.9506 163 245 2.40.10.480
4tqoD00 Mainly Beta;8 Propeller;Methanol Dehydrogenase; Chain A;Quinoprotein alcohol dehydrogenase-like superfamily 0.9428 62 622 2.140.10.10
6damA00 Mainly Beta;8 Propeller;Methanol Dehydrogenase; Chain A;Quinoprotein alcohol dehydrogenase-like superfamily 0.9308 62 623 2.140.10.10
2ymsB00 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.9138 163 245 2.40.10.480
ID Description Score Start End GO Terms
AF-A0A2V9QQZ9-F1-model_v4 PQQ-dependent dehydrogenase, methanol/ethanol family 0.9881 326 623 GO:0016491
AF-A0A529QLK5-F1-model_v4 PQQ-dependent dehydrogenase, methanol/ethanol family 0.9863 328 569 GO:0016491
AF-A0A528TVQ0-F1-model_v4 PQQ-dependent dehydrogenase, methanol/ethanol family 0.9827 290 567 GO:0016491
AF-X6HIE9-F1-model_v4 Methanol dehydrogenase 0.9818 69 623 GO:0005509
GO:0016020
GO:0016614
AF-A0A2V9QQZ9-F1-model_v4 PQQ-dependent dehydrogenase, methanol/ethanol family 0.9815 326 623 GO:0016491

Map