F337707

General Info

Members Datasets Scaffolds Average Seq Length
225 174 195 345

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10003677|Ga0105245_1000367716
Length 383
Sequence MAIGIALVVIAAQGRRFECGKGGPLVTTIEPSPLLELLGIELPIIQAPMAGISTPELAAAVSNARALGSISVGATNAADALQQIARLRELTPHSFNVNVFCHAPARENPTLEAEWLSRLRPEFERFGAEPPARLREIYRSFLEDDAMLRALIESRPRVVSFHFGVPDRARITALREANIVLLGCATDLREARLLEQAGVHAVVAQGVEAGGHRGIFDPEHDERIGMLALTRLLVRELALPVVAAGGIMDGAGIAAVLRVGASAAQLGTAFIACPESQADVGFRRALASDAALHTVLTRAISGRPARCLANRFTHWGEALGEVRVPEYPVAYDAGKALNAAAKARGEAGFGAHWAGQGAPLARALPAAELVRLLASELASGSSS

Samples

Sample ID Description Type Environment
1 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
2 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
3 2519103095 Burkholderia sp. KJ006 Isolate Nodule
4 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
5 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
6 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
7 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
8 2739367700 Dyella sp. YR388 Isolate Unclassified
9 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
10 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
11 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
12 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
13 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
14 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
15 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
16 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
17 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
18 2884411467 Dyella sp. AD56 Isolate Rhizosphere
19 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
20 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
21 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
22 2928963466 Dyella japonica 1073 Isolate Unclassified
23 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
24 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
25 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
26 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
27 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
28 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
29 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
32 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
33 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
34 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
57 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
74 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
121 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
126 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
168 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
169 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
172 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
173 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
174 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.67
Metatranscriptomes 0
Isolates 13.33

Biome Distribution

Category Percentage (%)
Aerial Root 1.33
Bulb 0
Endosphere 9.78
Nodule 2.67
Rhizoplane 3.56
Rhizosphere 66.22
Stem 0
Stem Tuber 0.44
Unclassified 16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10001416 3300002075 Bacteria 6654
2 JGI25162J39368_1000490 3300002737 Bacteria 30149
3 rootH1_10042397 3300003323 Bacteria 2945
4 Ga0055535_1003702 3300003761 Bacteria 4128
5 Ga0055542_1000082 3300003762 Bacteria 128120
6 Ga0055536_1011992 3300003781 Bacteria 3259
7 Ga0070683_100213999 3300005329 Bacteria 1831
8 Ga0070671_100000063 3300005355 Bacteria 72834
9 Ga0070667_100000114 3300005367 Bacteria 103351
10 Ga0070667_100179031 3300005367 Bacteria 1874
11 Ga0070663_100064268 3300005455 Unclassified 2652
12 Ga0070662_100064830 3300005457 Bacteria 2676
13 Ga0068853_100037023 3300005539 Unclassified 4151
14 Ga0070672_100006488 3300005543 Bacteria 7863
15 Ga0070686_100005030 3300005544 Bacteria 7301
16 Ga0070665_100017295 3300005548 Bacteria 7237
17 Ga0068855_100355232 3300005563 Unclassified 1614
18 Ga0068855_100533269 3300005563 Bacteria 1272
19 Ga0070664_100308609 3300005564 Unclassified 1431
20 Ga0068856_100069276 3300005614 Unclassified 3488
21 Ga0068864_100156763 3300005618 Unclassified 2067
22 Ga0068863_100002566 3300005841 Bacteria 18015
23 Ga0068863_100006627 3300005841 Bacteria 11365
24 Ga0068858_100003220 3300005842 Bacteria 16295
25 Ga0068858_100015706 3300005842 Bacteria 7122
26 Ga0068860_100000172 3300005843 Bacteria 106249
27 Ga0068860_100000725 3300005843 Bacteria 37556
28 Ga0068862_100025733 3300005844 Bacteria 4942
29 Ga0075364_10023205 3300006051 Bacteria 3927
30 Ga0075364_10251380 3300006051 Bacteria 1201
31 Ga0097621_100007259 3300006237 Bacteria 7913
32 Ga0068871_100170232 3300006358 Unclassified 1867
33 Ga0068871_100215166 3300006358 Bacteria 1663
34 Ga0075428_100010728 3300006844 Bacteria 10185
35 Ga0075429_100047657 3300006880 Bacteria 3728
36 Ga0079104_1009819 3300006946 Bacteria 3209
37 Ga0079104_1022514 3300006946 Bacteria 1693
38 Ga0099795_10014940 3300007788 Bacteria 2420
39 Ga0105240_10160852 3300009093 Unclassified 2667
40 Ga0111539_10418850 3300009094 Bacteria 1560
41 Ga0105245_10003677 3300009098 Bacteria 13696
42 Ga0105241_10059669 3300009174 Bacteria 2934
43 Ga0105241_10087500 3300009174 Bacteria 2452
44 Ga0105248_10296025 3300009177 Bacteria 1822
45 Ga0105237_10068032 3300009545 Bacteria 3556
46 Ga0105249_10022440 3300009553 Bacteria 5653
47 Ga0157369_10340732 3300013105 Bacteria 1557
48 Ga0157374_10120568 3300013296 Unclassified 2531
49 Ga0163162_10074182 3300013306 Unclassified 3460
50 Ga0157372_10012364 3300013307 Bacteria 9096
51 Ga0157372_10390641 3300013307 Bacteria 1621
52 Ga0163163_10111807 3300014325 Unclassified 2760
53 Ga0157379_10288219 3300014968 Unclassified 1495
54 Ga0157376_10539805 3300014969 Unclassified 1152
55 Ga0163161_10252268 3300017792 Bacteria 1375
56 Ga0213872_10002041 3300021361 Bacteria 12277
57 Ga0213872_10007063 3300021361 Bacteria 5559
58 Ga0209566_102649 3300025225 Bacteria 3153
59 Ga0209672_101300 3300025228 Bacteria 9643
60 Ga0209147_101181 3300025229 Bacteria 10615
61 Ga0209437_100194 3300025233 Bacteria 121991
62 Ga0209148_1000002 3300025254 Bacteria 2399500
63 Ga0209455_1004659 3300025272 Bacteria 4417
64 Ga0209676_1000182 3300025292 Bacteria 146373
65 Ga0209564_1000522 3300025295 Bacteria 62793
66 Ga0209257_1000484 3300025304 Bacteria 72044
67 Ga0207654_10031171 3300025911 Bacteria 2934
68 Ga0207694_10106566 3300025924 Bacteria 2226
69 Ga0207687_10003895 3300025927 Bacteria 10023
70 Ga0207644_10000075 3300025931 Bacteria 72848
71 Ga0207644_10097534 3300025931 Unclassified 2202
72 Ga0207706_10028146 3300025933 Bacteria 5021
73 Ga0207691_10029640 3300025940 Bacteria 5119
74 Ga0207712_10016202 3300025961 Bacteria 4821
75 Ga0207658_10000018 3300025986 Bacteria 213853
76 Ga0207658_10041787 3300025986 Bacteria 3322
77 Ga0207677_10008282 3300026023 Bacteria 5795
78 Ga0207703_10001395 3300026035 Bacteria 22003
79 Ga0207703_10100924 3300026035 Bacteria 2446
80 Ga0207639_10055276 3300026041 Unclassified 3037
81 Ga0207678_10051869 3300026067 Bacteria 3540
82 Ga0207702_10064815 3300026078 Bacteria 3127
83 Ga0207641_10004279 3300026088 Bacteria 12409
84 Ga0207641_10145252 3300026088 Bacteria 2144
85 Ga0207676_10083338 3300026095 Unclassified 2604
86 Ga0207698_10169864 3300026142 Bacteria 1919
87 Ga0268266_10062795 3300028379 Bacteria 3206
88 Ga0268265_10029831 3300028380 Bacteria 3922
89 Ga0268264_10000034 3300028381 Bacteria 401894
90 Ga0268264_10000111 3300028381 Bacteria 204718
91 Ga0265318_10001234 3300028577 Bacteria 15555
92 Ga0265313_10002999 3300031595 Bacteria 14045
93 Ga0265314_10053028 3300031711 Bacteria 2815
94 Ga0307405_10283114 3300031731 Bacteria 1249
95 Ga0307413_10155439 3300031824 Bacteria 1600
96 Ga0307406_10012958 3300031901 Bacteria 4765
97 Ga0307406_10041545 3300031901 Unclassified 2866
98 Ga0307406_10142266 3300031901 Bacteria 1700
99 Ga0307412_10028290 3300031911 Bacteria 3505
100 Ga0307412_10135312 3300031911 Bacteria 1797
101 Ga0307409_100051113 3300031995 Bacteria 3161
102 Ga0307409_100210237 3300031995 Bacteria 1748
103 Ga0307416_100019300 3300032002 Bacteria 4830
104 Ga0307416_100055944 3300032002 Plasmid 3180
105 Ga0307416_100152172 3300032002 Bacteria 2124
106 Ga0307414_10051540 3300032004 Bacteria 2858
107 Ga0307411_10034832 3300032005 Bacteria 3137
108 Ga0307507_10033000 3300033179 Bacteria 5386
109 Ga0307510_10000005 3300033180 Bacteria 633068
110 Ga0395899_0000026 3300037312 Bacteria 345291
111 Ga0395899_0000068 3300037312 Bacteria 202264
112 Ga0395898_0000144 3300037466 Bacteria 187889
113 Ga0436364_0412252 3300037853 Bacteria 2277
114 Ga0395901_0029895 3300038443 Bacteria 5611
115 Ga0436361_0088276 3300039447 Bacteria 12442
116 Ga0436361_0621527 3300039447 Bacteria 17412
117 Ga0450916_000560 3300042530 Bacteria 3301
118 Ga0466973_0077668 3300044659 Bacteria 2921
119 Ga0466961_0021366 3300044693 Bacteria 4166
120 Ga0466963_0088533 3300044694 Bacteria 2106
121 Ga0495638_0000065 3300046460 Bacteria 170849
122 Ga0495638_0000135 3300046460 Bacteria 118223
123 Ga0495638_0029675 3300046460 Bacteria 3527
124 Ga0495650_0000078 3300046471 Bacteria 245487
125 Ga0495607_0003436 3300046501 Bacteria 12123
126 Ga0495606_0007294 3300046507 Bacteria 9956
127 Ga0495606_0079900 3300046507 Bacteria 2036
128 Ga0495632_0054880 3300046519 Bacteria 1952
129 Ga0495637_0017435 3300046520 Bacteria 3346
130 Ga0495643_0000007 3300046522 Bacteria 383435
131 Ga0495643_0000074 3300046522 Bacteria 167277
132 Ga0495633_0000510 3300046558 Bacteria 39075
133 Ga0495633_0046560 3300046558 Bacteria 2051
134 Ga0495625_0066305 3300046660 Bacteria 2543
135 Ga0495649_0000022 3300046694 Bacteria 179407
136 Ga0495649_0001405 3300046694 Bacteria 18177
137 Ga0495676_0016639 3300047321 Bacteria 6516
138 Ga0495683_0000019 3300047323 Bacteria 183206
139 Ga0496103_0048769 3300048906 Bacteria 2618
140 Ga0496103_0152522 3300048906 Bacteria 1480
141 Ga0496104_0024942 3300048907 Bacteria 5507
142 Ga0496105_0020666 3300048908 Bacteria 5321
143 Ga0496112_0454626 3300048915 Bacteria 1218
144 Ga0496113_0006924 3300048916 Bacteria 7240
145 Ga0496115_0000072 3300048918 Bacteria 91408
146 Ga0496115_0002159 3300048918 Bacteria 14064
147 Ga0496116_0099832 3300048919 Bacteria 1737
148 Ga0496117_0000012 3300048920 Bacteria 608530
149 Ga0496118_0000003 3300048921 Bacteria 773148
150 Ga0496119_0000196 3300048922 Bacteria 85266
151 Ga0496119_0020799 3300048922 Bacteria 4767
152 Ga0496120_0000338 3300048923 Bacteria 78053
153 Ga0496120_0006992 3300048923 Bacteria 8488
154 Ga0496121_0018997 3300048924 Bacteria 6895
155 Ga0496121_0082764 3300048924 Unclassified 2536
156 Ga0496121_0224476 3300048924 Bacteria 1320
157 Ga0496124_0020868 3300048927 Bacteria 6043
158 Ga0496124_0034552 3300048927 Bacteria 4435
159 Ga0496124_0154523 3300048927 Bacteria 1796
160 Ga0496125_0008422 3300048928 Bacteria 10798
161 Ga0496125_0018017 3300048928 Bacteria 6713
162 Ga0496125_0055075 3300048928 Bacteria 3244
163 Ga0496126_0009050 3300048929 Bacteria 10646
164 Ga0496126_0015651 3300048929 Bacteria 7621
165 Ga0496126_0037090 3300048929 Bacteria 4551
166 Ga0496126_0137732 3300048929 Unclassified 2104
167 Ga0495678_030205 3300049459 Bacteria 2269
168 Ga0501032_0004383 3300049569 Bacteria 10651
169 Ga0501033_0004244 3300049570 Bacteria 11525
170 Ga0501033_0119091 3300049570 Bacteria 1917
171 Ga0501034_0026752 3300049571 Bacteria 5870
172 Ga0501037_0063067 3300049573 Bacteria 2702
173 Ga0501037_0222131 3300049573 Bacteria 1329
174 Ga0501043_0007475 3300049579 Bacteria 8677
175 Ga0501043_0014892 3300049579 Bacteria 6088
176 Ga0501046_0047214 3300049580 Bacteria 3415
177 Ga0501047_0003934 3300049581 Bacteria 13962
178 Ga0501047_0010808 3300049581 Bacteria 8627
179 Ga0501047_0059189 3300049581 Bacteria 3699
180 Ga0501047_0127700 3300049581 Bacteria 2423
181 Ga0501207_020097 3300049654 Bacteria 1064
182 Ga0501035_0131982 3300049822 Bacteria 2177
183 Ga0501044_0000592 3300049823 Bacteria 44003
184 Ga0501044_0004506 3300049823 Bacteria 15576
185 Ga0501044_0188450 3300049823 Bacteria 2026
186 Ga0501226_000001 3300049853 Bacteria 432595
187 nmdc:mga00v17_16375_c1 3300050491 Bacteria 4179
188 nmdc:mga0qj67_19199_c1 3300050509 Bacteria 5221
189 nmdc:mga08y16_384064_c1 3300050511 Bacteria 1439
190 Ga0500643_001345 3300053087 Bacteria 14321
191 Ga0500591_033634 3300053115 Bacteria 2467
192 Ga0500618_001226 3300053125 Bacteria 12014
193 Ga0500559_0037304 3300053136 Bacteria 2107
194 Ga0500616_0000029 3300053153 Bacteria 428959
195 Ga0500636_0003909 3300053177 Bacteria 8400

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013306 Ga0163162_10074182 Ga0163162_100741824 273
2 3300048922 Ga0496119_0000196 Ga0496119_0000196_15040_16104 295
3 3300048923 Ga0496120_0000338 Ga0496120_0000338_69137_70201 295
4 3300048922 Ga0496119_0020799 Ga0496119_0020799_2045_3184 297
5 3300048923 Ga0496120_0006992 Ga0496120_0006992_3944_5083 297
6 3300048924 Ga0496121_0224476 Ga0496121_0224476_118_1287 297
7 3300048928 Ga0496125_0018017 Ga0496125_0018017_3486_4625 297
8 3300049654 Ga0501207_020097 Ga0501207_020097_23_916 297
9 3300048924 Ga0496121_0018997 Ga0496121_0018997_3461_4618 299
10 3300048927 Ga0496124_0020868 Ga0496124_0020868_4240_5409 299
11 3300048928 Ga0496125_0055075 Ga0496125_0055075_2008_3177 299
12 3300048929 Ga0496126_0037090 Ga0496126_0037090_1944_3113 299
13 3300005548 Ga0070665_100017295 Ga0070665_1000172952 300
14 3300048906 Ga0496103_0152522 Ga0496103_0152522_243_1412 300
15 3300048919 Ga0496116_0099832 Ga0496116_0099832_384_1553 300
16 3300048920 Ga0496117_0000012 Ga0496117_0000012_233094_234263 300
17 3300048921 Ga0496118_0000003 Ga0496118_0000003_637486_638655 300
18 3300048927 Ga0496124_0034552 Ga0496124_0034552_1349_2518 300
19 3300046660 Ga0495625_0066305 Ga0495625_0066305_1306_2289 304
20 3300048915 Ga0496112_0454626 Ga0496112_0454626_27_1019 307
21 3300003323 rootH1_10042397 rootH1_100423972 309
22 3300046507 Ga0495606_0079900 Ga0495606_0079900_841_1908 309
23 3300046558 Ga0495633_0046560 Ga0495633_0046560_1006_2019 312
24 3300047323 Ga0495683_0000019 Ga0495683_0000019_45283_46359 318
25 3300005367 Ga0070667_100179031 Ga0070667_1001790312 319
26 3300007788 Ga0099795_10014940 Ga0099795_100149402 319
27 3300046460 Ga0495638_0000065 Ga0495638_0000065_64671_65711 323
28 3300005455 Ga0070663_100064268 Ga0070663_1000642682 324
29 3300005539 Ga0068853_100037023 Ga0068853_1000370233 324
30 3300005563 Ga0068855_100355232 Ga0068855_1003552322 324
31 3300005564 Ga0070664_100308609 Ga0070664_1003086091 324
32 3300005614 Ga0068856_100069276 Ga0068856_1000692762 324
33 3300005618 Ga0068864_100156763 Ga0068864_1001567632 324
34 3300005841 Ga0068863_100002566 Ga0068863_1000025662 324
35 3300005842 Ga0068858_100003220 Ga0068858_10000322011 324
36 3300005843 Ga0068860_100000725 Ga0068860_10000072519 324
37 3300005844 Ga0068862_100025733 Ga0068862_1000257333 324
38 3300006358 Ga0068871_100170232 Ga0068871_1001702322 324
39 3300009093 Ga0105240_10160852 Ga0105240_101608522 324
40 3300009177 Ga0105248_10296025 Ga0105248_102960252 324
41 3300009553 Ga0105249_10022440 Ga0105249_100224402 324
42 3300013296 Ga0157374_10120568 Ga0157374_101205681 324
43 3300014325 Ga0163163_10111807 Ga0163163_101118073 324
44 3300014968 Ga0157379_10288219 Ga0157379_102882191 324
45 3300014969 Ga0157376_10539805 Ga0157376_105398051 324
46 3300025931 Ga0207644_10097534 Ga0207644_100975342 324
47 3300025961 Ga0207712_10016202 Ga0207712_100162022 324
48 3300026035 Ga0207703_10001395 Ga0207703_1000139515 324
49 3300026041 Ga0207639_10055276 Ga0207639_100552762 324
50 3300026078 Ga0207702_10064815 Ga0207702_100648152 324
51 3300026088 Ga0207641_10004279 Ga0207641_100042798 324
52 3300026095 Ga0207676_10083338 Ga0207676_100833382 324
53 3300026142 Ga0207698_10169864 Ga0207698_101698642 324
54 3300028379 Ga0268266_10062795 Ga0268266_100627952 324
55 3300028380 Ga0268265_10029831 Ga0268265_100298313 324
56 3300028381 Ga0268264_10000034 Ga0268264_10000034106 324
57 3300033180 Ga0307510_10000005 Ga0307510_10000005365 324
58 3300046519 Ga0495632_0054880 Ga0495632_0054880_386_1465 324
59 3300048924 Ga0496121_0082764 Ga0496121_0082764_195_1274 324
60 3300048928 Ga0496125_0008422 Ga0496125_0008422_184_1263 324
61 3300048929 Ga0496126_0137732 Ga0496126_0137732_785_1864 324
62 iso_pu_bacteria 2993356040 2993359400 324
63 3300038443 Ga0395901_0029895 Ga0395901_0029895_18_1007 325
64 3300021361 Ga0213872_10002041 Ga0213872_100020416 327
65 3300039447 Ga0436361_0088276 Ga0436361_0088276_6304_7368 327
66 3300053136 Ga0500559_0037304 Ga0500559_0037304_141_1214 328
67 3300002737 JGI25162J39368_1000490 JGI25162J39368_100049010 329
68 3300003762 Ga0055542_1000082 Ga0055542_100008258 329
69 3300025228 Ga0209672_101300 Ga0209672_1013005 329
70 3300025233 Ga0209437_100194 Ga0209437_10019459 329
71 3300025254 Ga0209148_1000002 Ga0209148_10000021667 329
72 3300025272 Ga0209455_1004659 Ga0209455_10046595 329
73 3300026067 Ga0207678_10051869 Ga0207678_100518693 329
74 3300046460 Ga0495638_0000135 Ga0495638_0000135_58601_59677 329
75 3300046471 Ga0495650_0000078 Ga0495650_0000078_77663_78739 329
76 3300046507 Ga0495606_0007294 Ga0495606_0007294_3701_4777 329
77 3300046694 Ga0495649_0001405 Ga0495649_0001405_16436_17512 329
78 3300048918 Ga0496115_0000072 Ga0496115_0000072_66904_67980 329
79 3300048918 Ga0496115_0002159 Ga0496115_0002159_3586_4662 329
80 3300048929 Ga0496126_0009050 Ga0496126_0009050_2108_3184 329
81 3300048929 Ga0496126_0015651 Ga0496126_0015651_1651_2727 329
82 3300025225 Ga0209566_102649 Ga0209566_1026492 330
83 3300053115 Ga0500591_033634 Ga0500591_033634_1232_2305 330
84 iso_pu_bacteria 2893066018 2893070594 330
85 3300037466 Ga0395898_0000144 Ga0395898_0000144_110540_111622 331
86 3300044659 Ga0466973_0077668 Ga0466973_0077668_1584_2639 331
87 3300049569 Ga0501032_0004383 Ga0501032_0004383_3369_4415 333
88 3300049571 Ga0501034_0026752 Ga0501034_0026752_1503_2549 333
89 3300049579 Ga0501043_0014892 Ga0501043_0014892_3281_4327 333
90 3300049580 Ga0501046_0047214 Ga0501046_0047214_1059_2105 333
91 3300049581 Ga0501047_0059189 Ga0501047_0059189_200_1246 333
92 iso_pu_bacteria 2713897090 2715500074 333
93 iso_pu_bacteria 2855020534 2855020837 333
94 3300006237 Ga0097621_100007259 Ga0097621_1000072598 335
95 3300006358 Ga0068871_100215166 Ga0068871_1002151662 335
96 3300026023 Ga0207677_10008282 Ga0207677_100082827 335
97 3300005329 Ga0070683_100213999 Ga0070683_1002139993 336
98 3300026088 Ga0207641_10145252 Ga0207641_101452523 337
99 3300046460 Ga0495638_0029675 Ga0495638_0029675_1250_2311 339
100 iso_pu_bacteria 2882806704 2882807228 341
101 iso_pu_bacteria 2928027323 2928030496 342
102 iso_pu_bacteria 2984555340 2984557284 342
103 iso_pu_bacteria 2984564862 2984568318 342
104 iso_pu_bacteria 2808606373 2808905545 343
105 3300009545 Ga0105237_10068032 Ga0105237_100680322 346
106 3300021361 Ga0213872_10007063 Ga0213872_100070633 346
107 3300031595 Ga0265313_10002999 Ga0265313_100029997 346
108 3300031711 Ga0265314_10053028 Ga0265314_100530283 346
109 3300031824 Ga0307413_10155439 Ga0307413_101554392 346
110 3300031901 Ga0307406_10142266 Ga0307406_101422662 346
111 3300031911 Ga0307412_10028290 Ga0307412_100282905 346
112 3300031911 Ga0307412_10135312 Ga0307412_101353122 346
113 3300031995 Ga0307409_100210237 Ga0307409_1002102371 346
114 3300032002 Ga0307416_100055944 Ga0307416_1000559442 346
115 3300032002 Ga0307416_100152172 Ga0307416_1001521723 346
116 3300039447 Ga0436361_0621527 Ga0436361_0621527_10530_11579 346
117 3300042530 Ga0450916_000560 Ga0450916_000560_339_1382 346
118 3300049579 Ga0501043_0007475 Ga0501043_0007475_6800_7873 346
119 3300049581 Ga0501047_0003934 Ga0501047_0003934_10357_11430 346
120 3300049822 Ga0501035_0131982 Ga0501035_0131982_34_1101 346
121 3300049853 Ga0501226_000001 Ga0501226_000001_70918_71961 346
122 iso_pu_bacteria 2643221663 2644352365 346
123 iso_pu_bacteria 2775507255 2778124179 346
124 iso_pu_bacteria 3000865235 3000865450 346
125 3300005543 Ga0070672_100006488 Ga0070672_1000064887 347
126 3300005544 Ga0070686_100005030 Ga0070686_1000050302 347
127 3300006844 Ga0075428_100010728 Ga0075428_1000107283 347
128 3300006880 Ga0075429_100047657 Ga0075429_1000476572 347
129 3300009094 Ga0111539_10418850 Ga0111539_104188502 347
130 3300025911 Ga0207654_10031171 Ga0207654_100311712 347
131 3300025927 Ga0207687_10003895 Ga0207687_1000389513 347
132 3300025940 Ga0207691_10029640 Ga0207691_100296403 347
133 3300031731 Ga0307405_10283114 Ga0307405_102831141 347
134 3300031901 Ga0307406_10041545 Ga0307406_100415451 347
135 3300032002 Ga0307416_100019300 Ga0307416_1000193004 347
136 3300050509 nmdc:mga0qj67_19199_c1 nmdc:mga0qj67_19199_c1_1672_2718 347
137 3300050511 nmdc:mga08y16_384064_c1 nmdc:mga08y16_384064_c1_77_1123 347
138 3300053153 Ga0500616_0000029 Ga0500616_0000029_345667_346716 347
139 3300003781 Ga0055536_1011992 Ga0055536_10119925 348
140 3300006051 Ga0075364_10251380 Ga0075364_102513801 348
141 3300006946 Ga0079104_1009819 Ga0079104_10098192 348
142 3300006946 Ga0079104_1022514 Ga0079104_10225142 348
143 3300025292 Ga0209676_1000182 Ga0209676_100018215 348
144 3300025295 Ga0209564_1000522 Ga0209564_100052238 348
145 3300025304 Ga0209257_1000484 Ga0209257_100048416 348
146 3300031901 Ga0307406_10012958 Ga0307406_100129583 348
147 3300031995 Ga0307409_100051113 Ga0307409_1000511132 348
148 3300046501 Ga0495607_0003436 Ga0495607_0003436_2428_3501 348
149 3300046558 Ga0495633_0000510 Ga0495633_0000510_4543_5589 348
150 3300047321 Ga0495676_0016639 Ga0495676_0016639_4141_5214 348
151 3300048927 Ga0496124_0154523 Ga0496124_0154523_228_1301 348
152 3300053087 Ga0500643_001345 Ga0500643_001345_7818_8864 348
153 3300053125 Ga0500618_001226 Ga0500618_001226_411_1484 348
154 3300053177 Ga0500636_0003909 Ga0500636_0003909_5590_6705 348
155 iso_pu_bacteria 2513237145 2513920437 348
156 iso_pu_bacteria 2519103095 2519458761 348
157 iso_pu_bacteria 2582581311 2585292411 348
158 iso_pu_bacteria 2643221699 2644550295 348
159 iso_pu_bacteria 2739367700 2739730487 348
160 iso_pu_bacteria 2816332253 2817261033 348
161 iso_pu_bacteria 2816332256 2817278729 348
162 iso_pu_bacteria 2816332286 2817451804 348
163 iso_pu_bacteria 2856287931 2856290091 348
164 iso_pu_bacteria 2857357740 2857362868 348
165 iso_pu_bacteria 2884411467 2884413236 348
166 iso_pu_bacteria 2904615490 2904618622 348
167 iso_pu_bacteria 2928963466 2928964452 348
168 iso_pu_bacteria 8020807995 8020813250 348
169 iso_pu_bacteria 8040167225 8040169977 348
170 iso_pu_bacteria 8040173305 8040173442 348
171 3300006051 Ga0075364_10023205 Ga0075364_100232053 349
172 3300009098 Ga0105245_10003677 Ga0105245_1000367716 349
173 3300009174 Ga0105241_10059669 Ga0105241_100596694 349
174 3300017792 Ga0163161_10252268 Ga0163161_102522682 349
175 3300028577 Ga0265318_10001234 Ga0265318_1000123415 349
176 3300037312 Ga0395899_0000026 Ga0395899_0000026_24642_25706 349
177 3300037853 Ga0436364_0412252 Ga0436364_0412252_1210_2265 349
178 3300044694 Ga0466963_0088533 Ga0466963_0088533_992_2074 349
179 3300046520 Ga0495637_0017435 Ga0495637_0017435_180_1244 349
180 3300046694 Ga0495649_0000022 Ga0495649_0000022_173875_174945 349
181 3300049459 Ga0495678_030205 Ga0495678_030205_984_2048 349
182 3300049581 Ga0501047_0010808 Ga0501047_0010808_4870_5979 349
183 3300049823 Ga0501044_0004506 Ga0501044_0004506_13803_14912 349
184 3300050491 nmdc:mga00v17_16375_c1 nmdc:mga00v17_16375_c1_741_1847 349
185 iso_pu_bacteria 2513237150 2513955442 349
186 iso_pu_bacteria 2939602548 2939606347 349
187 3300002075 JGI24738J21930_10001416 JGI24738J21930_100014162 350
188 3300003761 Ga0055535_1003702 Ga0055535_10037024 350
189 3300005355 Ga0070671_100000063 Ga0070671_10000006351 350
190 3300005367 Ga0070667_100000114 Ga0070667_10000011460 350
191 3300005457 Ga0070662_100064830 Ga0070662_1000648301 350
192 3300005563 Ga0068855_100533269 Ga0068855_1005332692 350
193 3300005841 Ga0068863_100006627 Ga0068863_1000066274 350
194 3300005842 Ga0068858_100015706 Ga0068858_1000157065 350
195 3300005843 Ga0068860_100000172 Ga0068860_10000017263 350
196 3300009174 Ga0105241_10087500 Ga0105241_100875002 350
197 3300013105 Ga0157369_10340732 Ga0157369_103407322 350
198 3300013307 Ga0157372_10012364 Ga0157372_100123641 350
199 3300013307 Ga0157372_10390641 Ga0157372_103906412 350
200 3300025229 Ga0209147_101181 Ga0209147_1011818 350
201 3300025924 Ga0207694_10106566 Ga0207694_101065662 350
202 3300025931 Ga0207644_10000075 Ga0207644_100000757 350
203 3300025933 Ga0207706_10028146 Ga0207706_100281461 350
204 3300025986 Ga0207658_10000018 Ga0207658_10000018188 350
205 3300025986 Ga0207658_10041787 Ga0207658_100417872 350
206 3300026035 Ga0207703_10100924 Ga0207703_101009243 350
207 3300028381 Ga0268264_10000111 Ga0268264_10000111140 350
208 3300032004 Ga0307414_10051540 Ga0307414_100515402 350
209 3300032005 Ga0307411_10034832 Ga0307411_100348322 350
210 3300033179 Ga0307507_10033000 Ga0307507_100330001 350
211 3300037312 Ga0395899_0000068 Ga0395899_0000068_74995_76077 350
212 3300044693 Ga0466961_0021366 Ga0466961_0021366_377_1465 350
213 3300046522 Ga0495643_0000007 Ga0495643_0000007_185347_186498 350
214 3300046522 Ga0495643_0000074 Ga0495643_0000074_84503_85561 350
215 3300048906 Ga0496103_0048769 Ga0496103_0048769_1010_2062 350
216 3300048907 Ga0496104_0024942 Ga0496104_0024942_3435_4487 350
217 3300048908 Ga0496105_0020666 Ga0496105_0020666_633_1685 350
218 3300048916 Ga0496113_0006924 Ga0496113_0006924_2410_3462 350
219 3300049570 Ga0501033_0004244 Ga0501033_0004244_8815_9867 350
220 3300049570 Ga0501033_0119091 Ga0501033_0119091_280_1368 350
221 3300049573 Ga0501037_0063067 Ga0501037_0063067_243_1295 350
222 3300049573 Ga0501037_0222131 Ga0501037_0222131_226_1314 350
223 3300049581 Ga0501047_0127700 Ga0501047_0127700_1145_2233 350
224 3300049823 Ga0501044_0000592 Ga0501044_0000592_10909_11961 350
225 3300049823 Ga0501044_0188450 Ga0501044_0188450_158_1246 350

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03060

NMO

Nitronate monooxygenase

31

376

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q4k-assembly1.cif.gz_A crystal structure of nitronate monooxygenase from pseudomonas aeruginosa pao1 0.9787 3 347
4qit-assembly1.cif.gz_B crystal structure of nitroalkane oxidase from pseudomonas aeruginosa in mutant complex form 0.9774 5 346
4qiu-assembly1.cif.gz_B crystal structure of nitroalkane oxidase from pseudomonas aeruginosa in mutant complex form 0.9771 5 347
5lsm-assembly5.cif.gz_D crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9641 3 342
4q4k-assembly1.cif.gz_A crystal structure of nitronate monooxygenase from pseudomonas aeruginosa pao1 0.9622 3 347
ID Description Score Start End Superfamily
4qisA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9749 5 345 3.20.20.70
4qisA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9582 5 345 3.20.20.70
af_Q2FZX9_3_354_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.954 3 348 3.20.20.70
5lsmB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9424 7 342 3.20.20.70
af_I6X5C5_6_344_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.939 8 342 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A841LBL2-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9974 31 349 GO:0009636
GO:0018580
AF-A0A4Q3TRS0-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9966 1 272 GO:0009636
GO:0018580
AF-U2HIB6-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9952 3 348 GO:0009636
GO:0018580
AF-A0A147HQY8-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9943 9 319 GO:0009636
GO:0018580
GO:0051213
AF-A0A520FTL1-F1-model_v4 deleted 0.9943 1 229

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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