F337655

General Info

Members Datasets Scaffolds Average Seq Length
225 158 450 341

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100000091|Ga0075430_1000000916
Length 374
Sequence VREPAAQAVREPGGLVALTAPEPAGPGTELTASGAELAVDVPAHEWAAAVELLSALHAESTVLLACHVNPDGDALGSMLGFGLGLRRLGLRSVYASFPGPLEVPQPFRALPGLDLLVPASAAPAAPDLMLCFDAASVGRLGELADRIGPTTIVLDHHASNTRFGGVHLVDPSAAATSVVAGALLDRLGVPLDREIAECLYVALATDTGSFRFDLTTPAVHQLAARLLATGVSPAEVARRVFDTRPFGAVRLYGEVLRRVELEPGSAGGLGLVWTYATLEDLARHDQQPYVLEALIDSVRCVAEADVSCVVKQLAPHEWAVSLRSKGGVDVARVAVALGGGGHRLAAGFTGYGSPVEVVSAVRRELDGPWRENQG

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
72 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
73 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
89 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
109 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
110 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
111 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
112 2501939600 Micromonospora sp. L5 Isolate Unclassified
113 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
114 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
115 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
116 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
117 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
118 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
119 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
120 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
121 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
122 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
123 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
124 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
125 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
126 2855683550 Micromonospora sp. RP3T Isolate Unclassified
127 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
128 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
129 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
130 2858868258 Micromonospora sp. MH33 Isolate Unclassified
131 2858882152 Micromonospora noduli MED15 Isolate Nodule
132 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
133 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
134 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
135 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
136 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
137 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
138 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
139 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
140 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
141 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
142 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
143 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
144 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
145 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
146 2902582711 Micromonospora sp. AP08 Isolate Unclassified
147 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
148 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
149 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
150 649633069 Micromonospora sp. L5 Isolate Unclassified
151 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
152 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
153 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
154 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
155 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
156 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
157 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
158 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.22
Metatranscriptomes 0.89
Isolates 20.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.78
Nodule 2.67
Rhizoplane 4
Rhizosphere 72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100000091 3300006846 Bacteria 52409
2 JGI25406J46586_10057448 3300003203 Bacteria 1272
3 rootH1_10030266 3300003316 Bacteria 3741
4 rootH2_10052023 3300003320 Bacteria 2578
5 Ga0070658_10445802 3300005327 Bacteria 1115
6 Ga0070683_100138524 3300005329 Bacteria 2305
7 Ga0070683_100424112 3300005329 Bacteria 1269
8 Ga0070660_100075672 3300005339 Bacteria 2636
9 Ga0070668_100005060 3300005347 Bacteria 9758
10 Ga0070659_100095859 3300005366 Bacteria 2383
11 Ga0070714_100332511 3300005435 Bacteria 1423
12 Ga0070663_100255159 3300005455 Bacteria 1389
13 Ga0070663_100365109 3300005455 Bacteria 1172
14 Ga0070681_10138748 3300005458 Bacteria 2361
15 Ga0070679_100048521 3300005530 Bacteria 4230
16 Ga0070679_100083933 3300005530 Bacteria 3174
17 Ga0070684_100014743 3300005535 Bacteria 6342
18 Ga0070665_100323470 3300005548 Bacteria 1546
19 Ga0068857_100072776 3300005577 Bacteria 3062
20 Ga0068859_100062199 3300005617 Bacteria 3763
21 Ga0068859_100530636 3300005617 Bacteria 1272
22 Ga0068864_100006181 3300005618 Bacteria 9820
23 Ga0068861_100065355 3300005719 Bacteria 2802
24 Ga0068863_100025046 3300005841 Bacteria 5690
25 Ga0068863_100161765 3300005841 Bacteria 2145
26 Ga0068858_100045122 3300005842 Bacteria 4084
27 Ga0068858_100236382 3300005842 Bacteria 1733
28 Ga0068860_100015364 3300005843 Bacteria 7480
29 Ga0068860_100095141 3300005843 Bacteria 2839
30 Ga0068862_100027687 3300005844 Bacteria 4772
31 Ga0068862_100253239 3300005844 Bacteria 1605
32 Ga0068862_100287411 3300005844 Bacteria 1509
33 Ga0081540_1014761 3300005983 Bacteria 4982
34 Ga0081540_1020038 3300005983 Bacteria 4038
35 Ga0081539_10000357 3300005985 Bacteria 100714
36 Ga0081539_10000465 3300005985 Bacteria 85809
37 Ga0081539_10001023 3300005985 Bacteria 51478
38 Ga0081539_10005461 3300005985 Bacteria 12962
39 Ga0081539_10021228 3300005985 Bacteria 4347
40 Ga0070716_100013359 3300006173 Bacteria 4183
41 Ga0075428_100001544 3300006844 Bacteria 24649
42 Ga0075428_100009941 3300006844 Bacteria 10568
43 Ga0075428_100119358 3300006844 Bacteria 2872
44 Ga0075428_100159487 3300006844 Bacteria 2449
45 Ga0075430_100062344 3300006846 Bacteria 3133
46 Ga0075430_100063297 3300006846 Bacteria 3107
47 Ga0075430_100119978 3300006846 Bacteria 2192
48 Ga0075431_100009154 3300006847 Bacteria 9930
49 Ga0075431_100046737 3300006847 Bacteria 4464
50 Ga0075431_100075204 3300006847 Bacteria 3485
51 Ga0075431_100095773 3300006847 Bacteria 3064
52 Ga0075429_100001463 3300006880 Bacteria 19406
53 Ga0075429_100004985 3300006880 Bacteria 11437
54 Ga0075429_100044299 3300006880 Bacteria 3871
55 Ga0075429_100060366 3300006880 Bacteria 3303
56 Ga0097620_100062201 3300006931 Bacteria 3763
57 Ga0097620_100530660 3300006931 Bacteria 1272
58 Ga0114129_10000024 3300009147 Bacteria 116794
59 Ga0114129_10005490 3300009147 Bacteria 17924
60 Ga0114129_10011782 3300009147 Bacteria 12442
61 Ga0114129_10511079 3300009147 Bacteria 1567
62 Ga0105248_10081396 3300009177 Bacteria 3640
63 Ga0157369_10050520 3300013105 Bacteria 4503
64 Ga0157372_10113973 3300013307 Bacteria 3099
65 Ga0163163_10015729 3300014325 Bacteria 7006
66 Ga0163163_10160177 3300014325 Bacteria 2296
67 Ga0163163_10244587 3300014325 Bacteria 1844
68 Ga0206356_10953369 3300020070 Bacteria 2429
69 Ga0224712_10034406 3300022467 Bacteria 1863
70 Ga0207707_10039233 3300025912 Bacteria 4140
71 Ga0207693_10068467 3300025915 Bacteria 2778
72 Ga0207657_10103788 3300025919 Bacteria 2356
73 Ga0207652_10041225 3300025921 Bacteria 3923
74 Ga0207681_10181049 3300025923 Bacteria 1605
75 Ga0207644_10213502 3300025931 Bacteria 1527
76 Ga0207690_10174612 3300025932 Bacteria 1613
77 Ga0207711_10082743 3300025941 Bacteria 2806
78 Ga0207661_10013251 3300025944 Bacteria 6019
79 Ga0207661_10112858 3300025944 Bacteria 2302
80 Ga0207679_10320399 3300025945 Bacteria 1342
81 Ga0207668_10004891 3300025972 Bacteria 7881
82 Ga0207668_10223714 3300025972 Bacteria 1513
83 Ga0207677_10384352 3300026023 Bacteria 1186
84 Ga0207703_10367868 3300026035 Bacteria 1327
85 Ga0207678_10103201 3300026067 Bacteria 2434
86 Ga0207678_10303692 3300026067 Bacteria 1372
87 Ga0207676_10060816 3300026095 Bacteria 2989
88 Ga0207674_10032498 3300026116 Bacteria 5473
89 Ga0207674_10035475 3300026116 Bacteria 5205
90 Ga0207675_100081533 3300026118 Bacteria 3033
91 Ga0268265_10016172 3300028380 Bacteria 5122
92 Ga0268264_10021176 3300028381 Bacteria 5311
93 Ga0307515_10000241 3300028794 Bacteria 135591
94 Ga0307515_10031836 3300028794 Bacteria 8764
95 Ga0307515_10094129 3300028794 Bacteria 3704
96 Ga0307512_10003292 3300030522 Bacteria 19012
97 Ga0307512_10006316 3300030522 Bacteria 12030
98 Ga0307513_10006457 3300031456 Bacteria 15318
99 Ga0307513_10035284 3300031456 Bacteria 5597
100 Ga0307513_10142465 3300031456 Bacteria 2321
101 Ga0307509_10126431 3300031507 Bacteria 2521
102 Ga0307508_10012151 3300031616 Bacteria 7874
103 Ga0307508_10170779 3300031616 Bacteria 1778
104 Ga0307516_10008994 3300031730 Bacteria 11190
105 Ga0307516_10024461 3300031730 Bacteria 6168
106 Ga0307405_10013189 3300031731 Bacteria 4403
107 Ga0307405_10027570 3300031731 Bacteria 3295
108 Ga0307413_10042799 3300031824 Bacteria 2664
109 Ga0307410_10128477 3300031852 Bacteria 1859
110 Ga0326468_10000281 3300031889 Bacteria 5411
111 Ga0307406_10003190 3300031901 Bacteria 8925
112 Ga0307406_10061060 3300031901 Bacteria 2433
113 Ga0307406_10095055 3300031901 Bacteria 2016
114 Ga0307416_100101900 3300032002 Bacteria 2502
115 Ga0307416_100116666 3300032002 Bacteria 2367
116 Ga0307416_100372657 3300032002 Bacteria 1454
117 Ga0307416_100385737 3300032002 Bacteria 1433
118 Ga0307411_10017784 3300032005 Bacteria 4063
119 Ga0307411_10198790 3300032005 Bacteria 1538
120 Ga0307415_100107367 3300032126 Bacteria 2062
121 Ga0307415_100204443 3300032126 Bacteria 1570
122 Ga0307415_100269671 3300032126 Bacteria 1394
123 Ga0307415_100336583 3300032126 Bacteria 1265
124 Ga0373951_0000072 3300035091 Bacteria 40164
125 Ga0373942_0002195 3300035207 Bacteria 4802
126 Ga0373962_0007429 3300035242 Bacteria 2683
127 Ga0373935_0047952 3300035692 Bacteria 2703
128 Ga0373933_0046421 3300035724 Bacteria 2580
129 Ga0395899_0167706 3300037312 Bacteria 1548
130 Ga0395900_0017715 3300037418 Bacteria 7271
131 Ga0395900_0087087 3300037418 Bacteria 3210
132 Ga0395898_0003894 3300037466 Bacteria 16487
133 Ga0395898_0008012 3300037466 Bacteria 11208
134 Ga0395905_0009180 3300037471 Bacteria 9682
135 Ga0395905_0105432 3300037471 Bacteria 2647
136 Ga0395901_0030852 3300038443 Bacteria 5524
137 Ga0451853_0317859 3300041512 Bacteria 3974
138 Ga0466963_0105076 3300044694 Bacteria 1935
139 Ga0466957_0071538 3300044842 Bacteria 2145
140 Ga0495606_0002428 3300046507 Bacteria 21716
141 Ga0495632_0013328 3300046519 Bacteria 4697
142 Ga0495668_0000103 3300046616 Bacteria 135853
143 Ga0495625_0000643 3300046660 Bacteria 50299
144 Ga0495683_0033216 3300047323 Bacteria 2627
145 Ga0495626_0000197 3300048091 Bacteria 73484
146 Ga0496104_0014097 3300048907 Bacteria 7215
147 Ga0496104_0410033 3300048907 Bacteria 1267
148 Ga0496108_0000028 3300048911 Bacteria 168580
149 Ga0496108_0174214 3300048911 Bacteria 1862
150 Ga0496109_0011696 3300048912 Bacteria 7548
151 Ga0496110_0008445 3300048913 Bacteria 8290
152 Ga0496111_0040936 3300048914 Bacteria 3324
153 Ga0496112_0045583 3300048915 Bacteria 4298
154 Ga0496113_0015096 3300048916 Bacteria 5293
155 Ga0501034_0052535 3300049571 Bacteria 4105
156 Ga0501037_0027154 3300049573 Bacteria 4229
157 Ga0501039_0046787 3300049575 Bacteria 3343
158 Ga0501047_0068293 3300049581 Bacteria 3423
159 Ga0501048_0151022 3300049582 Bacteria 1643
160 Ga0501069_0259759 3300049585 Bacteria 1014
161 Ga0501074_0024933 3300049590 Bacteria 4345
162 nmdc:mga05p37_11220_c1 3300050507 Bacteria 10652
163 nmdc:mga05p37_11469_c1 3300050507 Bacteria 10558
164 nmdc:mga05p37_415348_c1 3300050507 Bacteria 1567
165 nmdc:mga05p37_70709_c1 3300050507 Bacteria 4293
166 nmdc:mga09592_2_c1 3300050508 Bacteria 168133
167 nmdc:mga09592_4491_c1 3300050508 Bacteria 11287
168 nmdc:mga09592_55312_c1 3300050508 Bacteria 3353
169 nmdc:mga0qj67_10_c2 3300050509 Bacteria 57980
170 nmdc:mga0qj67_36507_c1 3300050509 Bacteria 3845
171 nmdc:mga0qj67_692_c1 3300050509 Bacteria 22986
172 nmdc:mga06r32_205283_c1 3300050510 Bacteria 1958
173 nmdc:mga06r32_39_c1 3300050510 Bacteria 54656
174 nmdc:mga06r32_50410_c1 3300050510 Bacteria 3982
175 Ga0500644_0085730 3300053088 Bacteria 1168
176 Ga0500646_0000037 3300053090 Bacteria 37584
177 Ga0500583_0053994 3300053092 Bacteria 1875
178 Ga0500652_002112 3300053131 Bacteria 5971
179 2501944744 2501939600 Bacteria 6907073
180 2515497091 2515154088 Bacteria 5526283
181 2515721909 2515154129 Bacteria 5584369
182 2515757052 2515154137 Bacteria 5711575
183 2516085830 2515154202 Bacteria 5471270
184 2516091198 2515154203 Bacteria 5458536
185 2623587287 2622736626 Bacteria 7181580
186 2676486014 2675903059 Bacteria 8644972
187 2753264650 2751185782 Bacteria 11227053
188 2772644758 2772190715 Bacteria 6959372
189 2831937948 2831935698 Bacteria 5963223
190 2832007568 2832004796 Bacteria 6538017
191 2855674303 2855670206 Bacteria 7120389
192 2855682188 2855676851 Bacteria 7063653
193 2855689349 2855683550 Bacteria 7134265
194 2856861134 2856858025 Bacteria 7255264
195 2857292400 2857288857 Bacteria 7189066
196 2858853066 2858848962 Bacteria 6963058
197 2858869061 2858868258 Bacteria 7683772
198 2858884154 2858882152 Bacteria 7230291
199 2858889693 2858888857 Bacteria 7060307
200 2858896613 2858895516 Bacteria 7378898
201 2858903844 2858902515 Bacteria 7086037
202 2866071017 2866065130 Bacteria 6518152
203 2867304797 2867302475 Bacteria 7087181
204 2867315586 2867312974 Bacteria 7058875
205 2867324450 2867319477 Bacteria 7069771
206 2867507787 2867507094 Bacteria 6506033
207 2869051708 2869048445 Bacteria 6875584
208 2869068515 2869061728 Bacteria 7112407
209 2869073722 2869068681 Bacteria 7205615
210 2880492975 2880489317 Bacteria 7096270
211 2880499331 2880495981 Bacteria 7340502
212 2887481947 2887478801 Bacteria 8972725
213 2902587946 2902582711 Bacteria 6187705
214 2929221307 2929219909 Bacteria 6984360
215 2929227929 2929226422 Bacteria 7248583
216 2996226594 2996221748 Bacteria 6799777
217 649811896 649633069 Bacteria 6962533
218 8001781840 8001781756 Bacteria 9586736
219 8003832302 8003830390 Bacteria 6541657
220 8003857882 8003856774 Bacteria 7675274
221 8003876439 8003870546 Bacteria 7396674
222 8054710405 8054704163 Bacteria 7247792
223 8054731978 8054727385 Bacteria 7558670
224 8054739096 8054734606 Bacteria 6947278
225 8055416963 8055412473 Bacteria 6257500
226 Ga0075430_100000091
227 JGI25406J46586_10057448
228 rootH1_10030266
229 rootH2_10052023
230 Ga0070658_10445802
231 Ga0070683_100138524
232 Ga0070683_100424112
233 Ga0070660_100075672
234 Ga0070668_100005060
235 Ga0070659_100095859
236 Ga0070714_100332511
237 Ga0070663_100255159
238 Ga0070663_100365109
239 Ga0070681_10138748
240 Ga0070679_100048521
241 Ga0070679_100083933
242 Ga0070684_100014743
243 Ga0070665_100323470
244 Ga0068857_100072776
245 Ga0068859_100062199
246 Ga0068859_100530636
247 Ga0068864_100006181
248 Ga0068861_100065355
249 Ga0068863_100025046
250 Ga0068863_100161765
251 Ga0068858_100045122
252 Ga0068858_100236382
253 Ga0068860_100015364
254 Ga0068860_100095141
255 Ga0068862_100027687
256 Ga0068862_100253239
257 Ga0068862_100287411
258 Ga0081540_1014761
259 Ga0081540_1020038
260 Ga0081539_10000357
261 Ga0081539_10000465
262 Ga0081539_10001023
263 Ga0081539_10005461
264 Ga0081539_10021228
265 Ga0070716_100013359
266 Ga0075428_100001544
267 Ga0075428_100009941
268 Ga0075428_100119358
269 Ga0075428_100159487
270 Ga0075430_100062344
271 Ga0075430_100063297
272 Ga0075430_100119978
273 Ga0075431_100009154
274 Ga0075431_100046737
275 Ga0075431_100075204
276 Ga0075431_100095773
277 Ga0075429_100001463
278 Ga0075429_100004985
279 Ga0075429_100044299
280 Ga0075429_100060366
281 Ga0097620_100062201
282 Ga0097620_100530660
283 Ga0114129_10000024
284 Ga0114129_10005490
285 Ga0114129_10011782
286 Ga0114129_10511079
287 Ga0105248_10081396
288 Ga0157369_10050520
289 Ga0157372_10113973
290 Ga0163163_10015729
291 Ga0163163_10160177
292 Ga0163163_10244587
293 Ga0206356_10953369
294 Ga0224712_10034406
295 Ga0207707_10039233
296 Ga0207693_10068467
297 Ga0207657_10103788
298 Ga0207652_10041225
299 Ga0207681_10181049
300 Ga0207644_10213502
301 Ga0207690_10174612
302 Ga0207711_10082743
303 Ga0207661_10013251
304 Ga0207661_10112858
305 Ga0207679_10320399
306 Ga0207668_10004891
307 Ga0207668_10223714
308 Ga0207677_10384352
309 Ga0207703_10367868
310 Ga0207678_10103201
311 Ga0207678_10303692
312 Ga0207676_10060816
313 Ga0207674_10032498
314 Ga0207674_10035475
315 Ga0207675_100081533
316 Ga0268265_10016172
317 Ga0268264_10021176
318 Ga0307515_10000241
319 Ga0307515_10031836
320 Ga0307515_10094129
321 Ga0307512_10003292
322 Ga0307512_10006316
323 Ga0307513_10006457
324 Ga0307513_10035284
325 Ga0307513_10142465
326 Ga0307509_10126431
327 Ga0307508_10012151
328 Ga0307508_10170779
329 Ga0307516_10008994
330 Ga0307516_10024461
331 Ga0307405_10013189
332 Ga0307405_10027570
333 Ga0307413_10042799
334 Ga0307410_10128477
335 Ga0326468_10000281
336 Ga0307406_10003190
337 Ga0307406_10061060
338 Ga0307406_10095055
339 Ga0307416_100101900
340 Ga0307416_100116666
341 Ga0307416_100372657
342 Ga0307416_100385737
343 Ga0307411_10017784
344 Ga0307411_10198790
345 Ga0307415_100107367
346 Ga0307415_100204443
347 Ga0307415_100269671
348 Ga0307415_100336583
349 Ga0373951_0000072
350 Ga0373942_0002195
351 Ga0373962_0007429
352 Ga0373935_0047952
353 Ga0373933_0046421
354 Ga0395899_0167706
355 Ga0395900_0017715
356 Ga0395900_0087087
357 Ga0395898_0003894
358 Ga0395898_0008012
359 Ga0395905_0009180
360 Ga0395905_0105432
361 Ga0395901_0030852
362 Ga0451853_0317859
363 Ga0466963_0105076
364 Ga0466957_0071538
365 Ga0495606_0002428
366 Ga0495632_0013328
367 Ga0495668_0000103
368 Ga0495625_0000643
369 Ga0495683_0033216
370 Ga0495626_0000197
371 Ga0496104_0014097
372 Ga0496104_0410033
373 Ga0496108_0000028
374 Ga0496108_0174214
375 Ga0496109_0011696
376 Ga0496110_0008445
377 Ga0496111_0040936
378 Ga0496112_0045583
379 Ga0496113_0015096
380 Ga0501034_0052535
381 Ga0501037_0027154
382 Ga0501039_0046787
383 Ga0501047_0068293
384 Ga0501048_0151022
385 Ga0501069_0259759
386 Ga0501074_0024933
387 nmdc:mga05p37_11220_c1
388 nmdc:mga05p37_11469_c1
389 nmdc:mga05p37_415348_c1
390 nmdc:mga05p37_70709_c1
391 nmdc:mga09592_2_c1
392 nmdc:mga09592_4491_c1
393 nmdc:mga09592_55312_c1
394 nmdc:mga0qj67_10_c2
395 nmdc:mga0qj67_36507_c1
396 nmdc:mga0qj67_692_c1
397 nmdc:mga06r32_205283_c1
398 nmdc:mga06r32_39_c1
399 nmdc:mga06r32_50410_c1
400 Ga0500644_0085730
401 Ga0500646_0000037
402 Ga0500583_0053994
403 Ga0500652_002112
404 2501944744
405 2515497091
406 2515721909
407 2515757052
408 2516085830
409 2516091198
410 2623587287
411 2676486014
412 2753264650
413 2772644758
414 2831937948
415 2832007568
416 2855674303
417 2855682188
418 2855689349
419 2856861134
420 2857292400
421 2858853066
422 2858869061
423 2858884154
424 2858889693
425 2858896613
426 2858903844
427 2866071017
428 2867304797
429 2867315586
430 2867324450
431 2867507787
432 2869051708
433 2869068515
434 2869073722
435 2880492975
436 2880499331
437 2887481947
438 2902587946
439 2929221307
440 2929227929
441 2996226594
442 649811896
443 8001781840
444 8003832302
445 8003857882
446 8003876439
447 8054710405
448 8054731978
449 8054739096
450 8055416963

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02272

DHHA1

DHHA1 domain

276

365

0.81

PF01368

DHH

DHH family

61

203

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jju-assembly1.cif.gz_B crystal structure of rv2837c complexed with 5'-papa and 5'-amp 0.9484 16 337
5o25-assembly1.cif.gz_A structure of wildtype t.maritima pde (tm1595) in ligand-free state 0.9363 16 338
5jju-assembly1.cif.gz_B crystal structure of rv2837c complexed with 5'-papa and 5'-amp 0.9147 16 337
5o25-assembly1.cif.gz_A structure of wildtype t.maritima pde (tm1595) in ligand-free state 0.9137 16 338
5o4z-assembly1.cif.gz_A structure of the inactive t.maritima pde (tm1595) d80n d154n mutant with substrate 5'-papa 0.9104 16 338
ID Description Score Start End Superfamily
4ls9A02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9383 226 336 3.10.310.30
4ls9B01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.9289 19 210 3.90.1640.10
4ls9A02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9136 226 336 3.10.310.30
4ls9B01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.8966 19 210 3.90.1640.10
4py9A01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.8605 11 215 3.90.1640.10
ID Description Score Start End GO Terms
AF-A0A6N7G8Q1-F1-model_v4 Bifunctional oligoribonuclease/PAP phosphatase NrnA 0.9741 10 336 GO:0003676
AF-X8CF88-F1-model_v4 DHHA1 domain protein 0.9625 194 336 GO:0003676
AF-G7GIL7-F1-model_v4 DHH family protein 0.9581 15 334 GO:0003676
AF-A0A2N3G699-F1-model_v4 Uncharacterized protein 0.9566 31 336 GO:0003676
AF-A0A661PZ12-F1-model_v4 DHHA1 domain-containing protein 0.9545 244 338 GO:0003676

Map