F337547

General Info

Members Datasets Scaffolds Average Seq Length
225 158 450 139

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100992307|Ga0070707_1009923071
Length 147
Sequence LIAYVDASVLLRVALGQPNALPEWKQIRQGVASALVTMESLRTLDRLRLRAKLNDSEIALRRATILRLIGSLELVEVDTTVLERATQPMPTELGTLDAIHLATALLWNEMTQSHLVMTTHDNALAIGARAHGLSVLGVASGEQSYKA

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
80 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
81 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
84 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
85 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
100 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
101 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 4.44
Rhizosphere 93.78
Stem 0
Stem Tuber 0
Unclassified 36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100992307 3300005468 Unclassified 805
2 LJNas_1003199 3300000546 Bacteria 1901
3 Ga0065704_10569120 3300005289 Bacteria 624
4 Ga0070683_100203974 3300005329 Bacteria 1878
5 Ga0070690_100671865 3300005330 Bacteria 793
6 Ga0070680_100065980 3300005336 Bacteria 2967
7 Ga0070689_100297127 3300005340 Bacteria 1343
8 Ga0070669_100038989 3300005353 Bacteria 3451
9 Ga0070688_100033266 3300005365 Bacteria 3115
10 Ga0070659_100227323 3300005366 Unclassified 1541
11 Ga0070714_100144036 3300005435 Bacteria 2142
12 Ga0070711_100100017 3300005439 Bacteria 2108
13 Ga0070705_100397495 3300005440 Unclassified 1020
14 Ga0070700_100000034 3300005441 Bacteria 112374
15 Ga0070700_100061844 3300005441 Bacteria 2363
16 Ga0070708_100034187 3300005445 Unclassified 4421
17 Ga0070678_100137067 3300005456 Bacteria 1953
18 Ga0070681_10681585 3300005458 Bacteria 943
19 Ga0068867_100106423 3300005459 Bacteria 2148
20 Ga0070706_100000181 3300005467 Bacteria 79696
21 Ga0070707_100054318 3300005468 Bacteria 3840
22 Ga0070707_100101438 3300005468 Bacteria 2789
23 Ga0070698_100103263 3300005471 Bacteria 2821
24 Ga0070698_100174225 3300005471 Bacteria 2091
25 Ga0070698_100193004 3300005471 Bacteria 1974
26 Ga0070698_100199685 3300005471 Bacteria 1936
27 Ga0070698_100375992 3300005471 Bacteria 1353
28 Ga0070699_100018458 3300005518 Bacteria 5992
29 Ga0070684_100018217 3300005535 Bacteria 5781
30 Ga0070697_100012703 3300005536 Bacteria 6596
31 Ga0070697_100278793 3300005536 Bacteria 1434
32 Ga0070672_100150572 3300005543 Bacteria 1924
33 Ga0070695_100321845 3300005545 Unclassified 1150
34 Ga0070696_100799101 3300005546 Bacteria 776
35 Ga0070665_100327111 3300005548 Bacteria 1537
36 Ga0070704_100673119 3300005549 Bacteria 915
37 Ga0070664_100300764 3300005564 Bacteria 1450
38 Ga0070702_100685606 3300005615 Bacteria 779
39 Ga0068859_100127686 3300005617 Bacteria 2613
40 Ga0068859_100418278 3300005617 Bacteria 1437
41 Ga0068859_102603420 3300005617 Unclassified 556
42 Ga0068863_100461520 3300005841 Bacteria 1247
43 Ga0068858_100165798 3300005842 Bacteria 2081
44 Ga0068858_100352256 3300005842 Bacteria 1410
45 Ga0081455_10081169 3300005937 Unclassified 2656
46 Ga0075366_10356492 3300006195 Unclassified 898
47 Ga0097621_100742115 3300006237 Bacteria 906
48 Ga0097621_101317549 3300006237 Unclassified 682
49 Ga0068871_100142614 3300006358 Bacteria 2038
50 Ga0068871_101879838 3300006358 Unclassified 569
51 Ga0075433_10124423 3300006852 Bacteria 2290
52 Ga0075433_10289667 3300006852 Bacteria 1450
53 Ga0075433_11389245 3300006852 Unclassified 607
54 Ga0075434_100122145 3300006871 Bacteria 2620
55 Ga0075434_100138497 3300006871 Bacteria 2453
56 Ga0075434_100702800 3300006871 Unclassified 1028
57 Ga0068865_100589185 3300006881 Unclassified 938
58 Ga0075436_100099145 3300006914 Bacteria 2028
59 Ga0075436_100254593 3300006914 Unclassified 1251
60 Ga0075436_100605182 3300006914 Unclassified 808
61 Ga0075436_100629570 3300006914 Bacteria 792
62 Ga0097620_100127688 3300006931 Bacteria 2613
63 Ga0097620_100418254 3300006931 Bacteria 1437
64 Ga0097620_102603492 3300006931 Unclassified 556
65 Ga0075435_100144261 3300007076 Bacteria 1999
66 Ga0075435_100798855 3300007076 Unclassified 821
67 Ga0105245_12576209 3300009098 Unclassified 562
68 Ga0114129_12943221 3300009147 Unclassified 562
69 Ga0105242_11178555 3300009176 Bacteria 784
70 Ga0105248_10091943 3300009177 Bacteria 3417
71 Ga0105248_10192094 3300009177 Bacteria 2301
72 Ga0105248_10557883 3300009177 Bacteria 1292
73 Ga0105248_10830553 3300009177 Bacteria 1043
74 Ga0157369_11121480 3300013105 Unclassified 804
75 Ga0157378_11231685 3300013297 Bacteria 788
76 Ga0157378_12579754 3300013297 Unclassified 560
77 Ga0157372_10022097 3300013307 Bacteria 6881
78 Ga0157372_11941729 3300013307 Unclassified 676
79 Ga0157375_10091357 3300013308 Unclassified 3106
80 Ga0157375_11755901 3300013308 Bacteria 735
81 Ga0163163_10000023 3300014325 Bacteria 185843
82 Ga0157380_11001575 3300014326 Bacteria 869
83 Ga0157376_10956104 3300014969 Unclassified 877
84 Ga0213875_10080448 3300021388 Bacteria 1520
85 Ga0207645_10137894 3300025907 Bacteria 1589
86 Ga0207684_10000009 3300025910 Bacteria 572126
87 Ga0207663_10320700 3300025916 Bacteria 1164
88 Ga0207660_10108388 3300025917 Unclassified 2086
89 Ga0207646_10082388 3300025922 Bacteria 2877
90 Ga0207646_10171702 3300025922 Bacteria 1958
91 Ga0207664_10469028 3300025929 Bacteria 1125
92 Ga0207690_11388701 3300025932 Unclassified 587
93 Ga0207670_10221309 3300025936 Bacteria 1449
94 Ga0207711_10041614 3300025941 Bacteria 3913
95 Ga0207711_10265047 3300025941 Bacteria 1580
96 Ga0207689_11115895 3300025942 Bacteria 665
97 Ga0207661_10176191 3300025944 Bacteria 1864
98 Ga0207679_10247972 3300025945 Bacteria 1512
99 Ga0207703_10367199 3300026035 Unclassified 1328
100 Ga0207703_11383137 3300026035 Bacteria 677
101 Ga0207708_10000010 3300026075 Bacteria 227178
102 Ga0207708_11123667 3300026075 Unclassified 685
103 Ga0207641_12496246 3300026088 Unclassified 515
104 Ga0207648_10132657 3300026089 Bacteria 2193
105 Ga0209998_10109403 3300027717 Unclassified 690
106 Ga0268266_10642631 3300028379 Unclassified 1021
107 Ga0265316_10040079 3300031344 Bacteria 3757
108 Ga0307408_100441413 3300031548 Bacteria 1127
109 Ga0307413_10231360 3300031824 Bacteria 1358
110 Ga0307416_100414912 3300032002 Bacteria 1388
111 Ga0307414_10240876 3300032004 Bacteria 1497
112 Ga0373926_0108359 3300035083 Bacteria 1042
113 Ga0373944_0067436 3300035089 Unclassified 1159
114 Ga0373923_0130229 3300035111 Bacteria 1130
115 Ga0373923_0338360 3300035111 Unclassified 717
116 Ga0373923_0475994 3300035111 Unclassified 607
117 Ga0373936_0315591 3300035113 Unclassified 707
118 Ga0373945_0192044 3300035116 Bacteria 845
119 Ga0373953_0127935 3300035117 Bacteria 1082
120 Ga0373954_0625799 3300035118 Unclassified 534
121 Ga0373943_0371792 3300035170 Bacteria 822
122 Ga0373946_0556860 3300035171 Bacteria 592
123 Ga0373955_0065538 3300035172 Bacteria 2017
124 Ga0373924_0208278 3300035410 Bacteria 863
125 Ga0373935_0575669 3300035692 Unclassified 822
126 Ga0373935_1237533 3300035692 Unclassified 557
127 Ga0373927_0004987 3300035695 Bacteria 9196
128 Ga0373927_0008060 3300035695 Bacteria 7112
129 Ga0373947_0032361 3300035725 Bacteria 3082
130 Ga0373947_0040704 3300035725 Bacteria 2769
131 Ga0373937_0177098 3300036401 Bacteria 2002
132 Ga0373937_0435304 3300036401 Bacteria 1245
133 Ga0373937_1287125 3300036401 Unclassified 679
134 Ga0373937_1295510 3300036401 Bacteria 677
135 Ga0373925_0062997 3300037068 Bacteria 2789
136 Ga0395905_0767012 3300037471 Unclassified 867
137 Ga0436364_0671980 3300037853 Bacteria 4421
138 Ga0436365_0694934 3300039437 Unclassified 1678
139 Ga0436361_0279629 3300039447 Bacteria 1867
140 Ga0436362_0693977 3300039453 Unclassified 1565
141 Ga0436362_0774085 3300039453 Unclassified 763
142 Ga0451800_0269729 3300041459 Unclassified 599
143 Ga0450896_040020 3300042133 Unclassified 728
144 Ga0451577_0406661 3300042876 Bacteria 1235
145 Ga0439440_0169633 3300042993 Bacteria 634
146 Ga0453683_0003624 3300044673 Bacteria 11330
147 Ga0453683_0011296 3300044673 Bacteria 5892
148 Ga0453683_0949972 3300044673 Bacteria 569
149 Ga0466966_0159436 3300044684 Bacteria 1374
150 Ga0453684_0094862 3300044712 Unclassified 3669
151 Ga0453684_0824992 3300044712 Bacteria 998
152 Ga0451576_0048794 3300045051 Bacteria 4445
153 Ga0451576_0235673 3300045051 Bacteria 1911
154 Ga0495603_0424872 3300046455 Bacteria 761
155 Ga0495603_0646744 3300046455 Bacteria 605
156 Ga0495629_0137339 3300046459 Unclassified 1702
157 Ga0495629_0232354 3300046459 Unclassified 1271
158 Ga0495653_0747554 3300046463 Unclassified 591
159 Ga0495580_0168381 3300046472 Bacteria 1515
160 Ga0495582_0847718 3300046473 Unclassified 528
161 Ga0495639_0008544 3300046475 Bacteria 4392
162 Ga0495639_0221526 3300046475 Bacteria 930
163 Ga0495594_0115491 3300046499 Unclassified 1515
164 Ga0495594_0161984 3300046499 Bacteria 1272
165 Ga0495630_0067745 3300046517 Unclassified 2683
166 Ga0495586_0049804 3300046535 Unclassified 2265
167 Ga0495587_0330522 3300046536 Unclassified 851
168 Ga0495645_0800142 3300046543 Unclassified 566
169 Ga0495634_0451687 3300046642 Unclassified 758
170 Ga0495634_0573712 3300046642 Unclassified 656
171 Ga0495647_0583014 3300046681 Unclassified 524
172 Ga0495658_0364355 3300046683 Unclassified 919
173 Ga0495613_0151475 3300046689 Bacteria 1654
174 Ga0495581_0024621 3300047315 Unclassified 3488
175 Ga0495674_0810396 3300047319 Unclassified 728
176 Ga0495674_1368452 3300047319 Unclassified 529
177 Ga0495684_0051929 3300047471 Unclassified 3128
178 Ga0496101_0539757 3300048904 Bacteria 922
179 Ga0496104_0370037 3300048907 Unclassified 1346
180 Ga0496104_0898969 3300048907 Unclassified 790
181 Ga0496105_0083650 3300048908 Bacteria 2635
182 Ga0496110_0149513 3300048913 Unclassified 2114
183 Ga0496110_1407706 3300048913 Unclassified 607
184 Ga0496114_0056973 3300048917 Bacteria 3262
185 Ga0496114_0488648 3300048917 Unclassified 1089
186 Ga0496115_0293340 3300048918 Bacteria 1333
187 Ga0501299_162312 3300049522 Bacteria 572
188 Ga0501031_0583208 3300049568 Unclassified 720
189 Ga0501036_0591485 3300049572 Bacteria 921
190 Ga0501036_1511618 3300049572 Unclassified 543
191 Ga0501037_0350973 3300049573 Unclassified 1018
192 Ga0501038_0449340 3300049574 Bacteria 991
193 Ga0501039_0705541 3300049575 Bacteria 789
194 Ga0501042_0468119 3300049578 Bacteria 914
195 Ga0501068_0469504 3300049584 Unclassified 815
196 Ga0501069_0236112 3300049585 Bacteria 1065
197 Ga0501071_1056211 3300049587 Unclassified 627
198 Ga0501072_0083325 3300049588 Bacteria 2535
199 Ga0501072_0134231 3300049588 Bacteria 1974
200 Ga0501074_0385944 3300049590 Bacteria 994
201 Ga0501075_0383661 3300049591 Bacteria 1071
202 Ga0501076_0135141 3300049592 Bacteria 2002
203 Ga0501079_0786303 3300049741 Unclassified 749
204 Ga0501080_1791651 3300049742 Bacteria 516
205 Ga0501081_0171197 3300049743 Bacteria 1568
206 Ga0501083_0433980 3300049744 Bacteria 855
207 Ga0501045_0518631 3300049824 Bacteria 885
208 nmdc:mga0n895_109444_c1 3300050512 Bacteria 2778
209 nmdc:mga0n895_773924_c1 3300050512 Unclassified 952
210 nmdc:mga0rr50_273513_c1 3300050513 Unclassified 1408
211 nmdc:mga0rr50_60317_c1 3300050513 Bacteria 2853
212 nmdc:mga08x19_153265_c1 3300050514 Unclassified 1562
213 nmdc:mga08x19_475471_c1 3300050514 Bacteria 881
214 nmdc:mga08x19_522747_c1 3300050514 Unclassified 839
215 nmdc:mga0a205_202152_c1 3300050515 Unclassified 1877
216 nmdc:mga0a205_226816_c1 3300050515 Bacteria 1753
217 nmdc:mga0a205_38757_c1 3300050515 Bacteria 4586
218 Ga0495619_0141529 3300053085 Bacteria 1657
219 Ga0501084_0339432 3300054114 Bacteria 1269
220 Ga0501082_0257940 3300060353 Bacteria 1517
221 Ga0501082_0331160 3300060353 Bacteria 1327
222 Ga0530510_0374962 3300061734 Unclassified 1071
223 Ga0530510_0388305 3300061734 Bacteria 1051
224 Ga0530510_0737158 3300061734 Bacteria 751
225 Ga0530510_1168448 3300061734 Unclassified 590
226 Ga0070707_100992307
227 LJNas_1003199
228 Ga0065704_10569120
229 Ga0070683_100203974
230 Ga0070690_100671865
231 Ga0070680_100065980
232 Ga0070689_100297127
233 Ga0070669_100038989
234 Ga0070688_100033266
235 Ga0070659_100227323
236 Ga0070714_100144036
237 Ga0070711_100100017
238 Ga0070705_100397495
239 Ga0070700_100000034
240 Ga0070700_100061844
241 Ga0070708_100034187
242 Ga0070678_100137067
243 Ga0070681_10681585
244 Ga0068867_100106423
245 Ga0070706_100000181
246 Ga0070707_100054318
247 Ga0070707_100101438
248 Ga0070698_100103263
249 Ga0070698_100174225
250 Ga0070698_100193004
251 Ga0070698_100199685
252 Ga0070698_100375992
253 Ga0070699_100018458
254 Ga0070684_100018217
255 Ga0070697_100012703
256 Ga0070697_100278793
257 Ga0070672_100150572
258 Ga0070695_100321845
259 Ga0070696_100799101
260 Ga0070665_100327111
261 Ga0070704_100673119
262 Ga0070664_100300764
263 Ga0070702_100685606
264 Ga0068859_100127686
265 Ga0068859_100418278
266 Ga0068859_102603420
267 Ga0068863_100461520
268 Ga0068858_100165798
269 Ga0068858_100352256
270 Ga0081455_10081169
271 Ga0075366_10356492
272 Ga0097621_100742115
273 Ga0097621_101317549
274 Ga0068871_100142614
275 Ga0068871_101879838
276 Ga0075433_10124423
277 Ga0075433_10289667
278 Ga0075433_11389245
279 Ga0075434_100122145
280 Ga0075434_100138497
281 Ga0075434_100702800
282 Ga0068865_100589185
283 Ga0075436_100099145
284 Ga0075436_100254593
285 Ga0075436_100605182
286 Ga0075436_100629570
287 Ga0097620_100127688
288 Ga0097620_100418254
289 Ga0097620_102603492
290 Ga0075435_100144261
291 Ga0075435_100798855
292 Ga0105245_12576209
293 Ga0114129_12943221
294 Ga0105242_11178555
295 Ga0105248_10091943
296 Ga0105248_10192094
297 Ga0105248_10557883
298 Ga0105248_10830553
299 Ga0157369_11121480
300 Ga0157378_11231685
301 Ga0157378_12579754
302 Ga0157372_10022097
303 Ga0157372_11941729
304 Ga0157375_10091357
305 Ga0157375_11755901
306 Ga0163163_10000023
307 Ga0157380_11001575
308 Ga0157376_10956104
309 Ga0213875_10080448
310 Ga0207645_10137894
311 Ga0207684_10000009
312 Ga0207663_10320700
313 Ga0207660_10108388
314 Ga0207646_10082388
315 Ga0207646_10171702
316 Ga0207664_10469028
317 Ga0207690_11388701
318 Ga0207670_10221309
319 Ga0207711_10041614
320 Ga0207711_10265047
321 Ga0207689_11115895
322 Ga0207661_10176191
323 Ga0207679_10247972
324 Ga0207703_10367199
325 Ga0207703_11383137
326 Ga0207708_10000010
327 Ga0207708_11123667
328 Ga0207641_12496246
329 Ga0207648_10132657
330 Ga0209998_10109403
331 Ga0268266_10642631
332 Ga0265316_10040079
333 Ga0307408_100441413
334 Ga0307413_10231360
335 Ga0307416_100414912
336 Ga0307414_10240876
337 Ga0373926_0108359
338 Ga0373944_0067436
339 Ga0373923_0130229
340 Ga0373923_0338360
341 Ga0373923_0475994
342 Ga0373936_0315591
343 Ga0373945_0192044
344 Ga0373953_0127935
345 Ga0373954_0625799
346 Ga0373943_0371792
347 Ga0373946_0556860
348 Ga0373955_0065538
349 Ga0373924_0208278
350 Ga0373935_0575669
351 Ga0373935_1237533
352 Ga0373927_0004987
353 Ga0373927_0008060
354 Ga0373947_0032361
355 Ga0373947_0040704
356 Ga0373937_0177098
357 Ga0373937_0435304
358 Ga0373937_1287125
359 Ga0373937_1295510
360 Ga0373925_0062997
361 Ga0395905_0767012
362 Ga0436364_0671980
363 Ga0436365_0694934
364 Ga0436361_0279629
365 Ga0436362_0693977
366 Ga0436362_0774085
367 Ga0451800_0269729
368 Ga0450896_040020
369 Ga0451577_0406661
370 Ga0439440_0169633
371 Ga0453683_0003624
372 Ga0453683_0011296
373 Ga0453683_0949972
374 Ga0466966_0159436
375 Ga0453684_0094862
376 Ga0453684_0824992
377 Ga0451576_0048794
378 Ga0451576_0235673
379 Ga0495603_0424872
380 Ga0495603_0646744
381 Ga0495629_0137339
382 Ga0495629_0232354
383 Ga0495653_0747554
384 Ga0495580_0168381
385 Ga0495582_0847718
386 Ga0495639_0008544
387 Ga0495639_0221526
388 Ga0495594_0115491
389 Ga0495594_0161984
390 Ga0495630_0067745
391 Ga0495586_0049804
392 Ga0495587_0330522
393 Ga0495645_0800142
394 Ga0495634_0451687
395 Ga0495634_0573712
396 Ga0495647_0583014
397 Ga0495658_0364355
398 Ga0495613_0151475
399 Ga0495581_0024621
400 Ga0495674_0810396
401 Ga0495674_1368452
402 Ga0495684_0051929
403 Ga0496101_0539757
404 Ga0496104_0370037
405 Ga0496104_0898969
406 Ga0496105_0083650
407 Ga0496110_0149513
408 Ga0496110_1407706
409 Ga0496114_0056973
410 Ga0496114_0488648
411 Ga0496115_0293340
412 Ga0501299_162312
413 Ga0501031_0583208
414 Ga0501036_0591485
415 Ga0501036_1511618
416 Ga0501037_0350973
417 Ga0501038_0449340
418 Ga0501039_0705541
419 Ga0501042_0468119
420 Ga0501068_0469504
421 Ga0501069_0236112
422 Ga0501071_1056211
423 Ga0501072_0083325
424 Ga0501072_0134231
425 Ga0501074_0385944
426 Ga0501075_0383661
427 Ga0501076_0135141
428 Ga0501079_0786303
429 Ga0501080_1791651
430 Ga0501081_0171197
431 Ga0501083_0433980
432 Ga0501045_0518631
433 nmdc:mga0n895_109444_c1
434 nmdc:mga0n895_773924_c1
435 nmdc:mga0rr50_273513_c1
436 nmdc:mga0rr50_60317_c1
437 nmdc:mga08x19_153265_c1
438 nmdc:mga08x19_475471_c1
439 nmdc:mga08x19_522747_c1
440 nmdc:mga0a205_202152_c1
441 nmdc:mga0a205_226816_c1
442 nmdc:mga0a205_38757_c1
443 Ga0495619_0141529
444 Ga0501084_0339432
445 Ga0501082_0257940
446 Ga0501082_0331160
447 Ga0530510_0374962
448 Ga0530510_0388305
449 Ga0530510_0737158
450 Ga0530510_1168448

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

3

126

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v5y-assembly1.cif.gz_B6 crystal structure of the bacterial ribosome from escherichia coli in complex with paromomycin and ribosome recycling factor (rrf). 0.9615 36 70
4v5a-assembly1.cif.gz_AY structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mrna, asl-phe and trna-fmet 0.9256 36 70
5brk-assembly1.cif.gz_B pmob1-lats1 complex 0.8987 37 70
4v5a-assembly2.cif.gz_CY structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mrna, asl-phe and trna-fmet 0.8889 36 70
4gfq-assembly1.cif.gz_A 2.65 angstrom resolution crystal structure of ribosome recycling factor (frr) from bacillus anthracis 0.8409 36 70
ID Description Score Start End Superfamily
2qbi601 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9702 36 70 1.10.132.20
2qbe601 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9552 36 70 1.10.132.20
2qbg601 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.9511 36 70 1.10.132.20
af_Q9VM87_551_610_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9482 37 70 1.10.287.110
2qbk601 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.939 36 70 1.10.132.20
ID Description Score Start End GO Terms
AF-A0A7C2DW72-F1-model_v4 PIN domain-containing protein 0.9946 1 137
AF-A0A2V9KPM5-F1-model_v4 PIN domain-containing protein 0.9918 1 137
AF-A0A537K795-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9915 1 138
AF-A0A2V6RP25-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9885 1 137 GO:0000287
GO:0004540
GO:0090729
AF-A0A2V7KU65-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9869 1 138 GO:0000287
GO:0004540
GO:0090729

Map