F335742

General Info

Members Datasets Scaffolds Average Seq Length
223 139 213 944

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10001416|Ga0265340_100014169
Length 992
Sequence VSAEALAKADEGGIAPYSLLATRYSPYYRSMTAFAFSTASLPKPFDAARAERTFERLAAEGFRPQGPARALLQSAFGNSAFLCRLALRERAAVERLFAEGPRTLLAEASNQAASACESEATIMASLRQAKRRAALAIALADIAGVWPLEEVTSALTGFADACIRGALRFALQEAALGTAFAGQGGAALETSTGLVVLAMGKYGAFELNYSSDIDIVVFYDAEVFPFRKRGDARGAAVDIVKRVVKLIGEVTSDGYVFRVDLRLRPDAGATQIAISTEAAESYYEEMGQNWERAAMIKARACAGDPKAGARFLAAVEPFIWRRNLDFAAIEDIHSIKRQIHAHVGHGEIAVAGHNIKLGRGGIREIEFFAQTQQLILGGRDPSLRAHGTVDALNALCARGHVSAESARELTKSYRFLRTLEHRLQMMEDEQTHTVPKTPQGVAHTACFMGFADGSSFALALLDELEAVQSHYAHLFERAAPLASEGGNLVFTGVEDDPETLKTLTHMGFRDAAHVSGAIRGWHHGRIRATRSARARELLTRLVPLLLAALAAAADPDVAFAQYDRFLTRLPAGVQLFSLLLAHSELLRLIAAIMGSAPRLAEHLGRSPGTLDALLDSDFLGALPTRSALDRALQCQLARADNYEAALDTVRRFVKEQIFRVGVQVIEGIAKADAAGPAFAEIAECAIVNLLPRVADALGQSAGKVPGAAFAVIAMGKLGGREMTAGSDLDLVFVYDVPAAVESSDGPHPLPASLFYARLAQRLIAALTVATAEGGLYEVDMRLRPTGNKGPVAVSLETFTRYHETESWTWERLALTRARLIAGPPALAAKLDRTIAATLCRRVDWAKLFGDAREMREKVAKQYPGKNPWDLKYAPGGLIDIEFTAQTLQLRHACDDASVLSTNTIAALERLTKAGALGEIDAEALIAAADLQHALTQALRIALDGPLDAGSATPGLKALLARAGAVSDFEVLQKLLADLQARARQVYLRAMGA

Samples

Sample ID Description Type Environment
1 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
2 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
3 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
4 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
5 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
6 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
7 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
8 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
9 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
80 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
101 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
106 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
137 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.07
Metatranscriptomes 0.45
Isolates 4.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0
Rhizoplane 0
Rhizosphere 87
Stem 0
Stem Tuber 0
Unclassified 8.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10027638 3300003320 Bacteria 24348
2 Ga0006562J51391_1088773 3300003578 Bacteria 8280
3 Ga0055536_1000937 3300003781 Bacteria 18775
4 Ga0055536_1002742 3300003781 Bacteria 9748
5 Ga0070658_10006624 3300005327 Bacteria 9386
6 Ga0070658_10017895 3300005327 Bacteria 5668
7 Ga0068869_100001403 3300005334 Bacteria 14238
8 Ga0070666_10000613 3300005335 Bacteria 21473
9 Ga0070680_100000505 3300005336 Bacteria 26838
10 Ga0070691_10001835 3300005341 Bacteria 9260
11 Ga0070673_100012112 3300005364 Bacteria 5911
12 Ga0070713_100000262 3300005436 Bacteria 34628
13 Ga0070713_100012015 3300005436 Bacteria 6338
14 Ga0070711_100025171 3300005439 Bacteria 3891
15 Ga0070678_100008048 3300005456 Bacteria 6289
16 Ga0070681_10000003 3300005458 Bacteria 252785
17 Ga0068867_100022527 3300005459 Bacteria 4504
18 Ga0070679_100000063 3300005530 Bacteria 79786
19 Ga0070684_100019778 3300005535 Bacteria 5575
20 Ga0068853_100018238 3300005539 Bacteria 5806
21 Ga0068853_100027307 3300005539 Bacteria 4795
22 Ga0070665_100001553 3300005548 Bacteria 26522
23 Ga0070665_100015467 3300005548 Bacteria 7666
24 Ga0070665_100026496 3300005548 Bacteria 5837
25 Ga0070665_100029549 3300005548 Bacteria 5516
26 Ga0070665_100050853 3300005548 Bacteria 4158
27 Ga0068855_100050045 3300005563 Bacteria 4925
28 Ga0068856_100004359 3300005614 Bacteria 14099
29 Ga0068856_100007281 3300005614 Bacteria 10793
30 Ga0068856_100048910 3300005614 Bacteria 4168
31 Ga0068858_100025068 3300005842 Bacteria 5550
32 Ga0068860_100038007 3300005843 Bacteria 4606
33 Ga0081455_10001848 3300005937 Bacteria 25494
34 Ga0081455_10015228 3300005937 Bacteria 7481
35 Ga0070712_100000171 3300006175 Bacteria 35631
36 Ga0070712_100000318 3300006175 Bacteria 27164
37 Ga0097621_100002762 3300006237 Bacteria 12003
38 Ga0097621_100017266 3300006237 Bacteria 5476
39 Ga0068871_100001266 3300006358 Bacteria 16909
40 Ga0075436_100000543 3300006914 Bacteria 24622
41 Ga0105240_10002102 3300009093 Bacteria 32589
42 Ga0105240_10004130 3300009093 Bacteria 22268
43 Ga0105240_10006591 3300009093 Bacteria 17042
44 Ga0105240_10045205 3300009093 Bacteria 5589
45 Ga0105240_10062749 3300009093 Bacteria 4625
46 Ga0111539_10065614 3300009094 Bacteria 4289
47 Ga0105241_10005992 3300009174 Bacteria 8969
48 Ga0105237_10007476 3300009545 Bacteria 11953
49 Ga0105238_10004371 3300009551 Bacteria 14022
50 Ga0105238_10006862 3300009551 Bacteria 11372
51 Ga0105238_10047330 3300009551 Bacteria 4338
52 Ga0105238_10061412 3300009551 Bacteria 3761
53 Ga0105239_10009987 3300010375 Bacteria 10653
54 Ga0105239_10034629 3300010375 Bacteria 5547
55 Ga0157373_10001939 3300013100 Bacteria 15716
56 Ga0157370_10006211 3300013104 Bacteria 13247
57 Ga0157369_10001941 3300013105 Bacteria 24894
58 Ga0157369_10017090 3300013105 Bacteria 8152
59 Ga0157378_10016138 3300013297 Bacteria 6541
60 Ga0163162_10035365 3300013306 Bacteria 4976
61 Ga0157372_10014805 3300013307 Bacteria 8351
62 Ga0163163_10000004 3300014325 Bacteria 416569
63 Ga0157379_10000489 3300014968 Bacteria 32177
64 Ga0157379_10003605 3300014968 Bacteria 13134
65 Ga0157379_10010777 3300014968 Bacteria 7966
66 Ga0157379_10018393 3300014968 Bacteria 6160
67 Ga0157379_10019226 3300014968 Bacteria 6032
68 Ga0213876_10000370 3300021384 Bacteria 38179
69 Ga0213876_10003633 3300021384 Bacteria 8770
70 Ga0209233_1000006 3300025261 Bacteria 1473685
71 Ga0209676_1000038 3300025292 Bacteria 449305
72 Ga0209676_1001119 3300025292 Bacteria 29587
73 Ga0209758_1000008 3300025297 Bacteria 1215263
74 Ga0209257_1000306 3300025304 Bacteria 105616
75 Ga0207680_10002296 3300025903 Bacteria 8915
76 Ga0207680_10003338 3300025903 Bacteria 7558
77 Ga0207645_10012560 3300025907 Bacteria 5743
78 Ga0207707_10000001 3300025912 Bacteria 1212482
79 Ga0207695_10004187 3300025913 Bacteria 19822
80 Ga0207695_10019436 3300025913 Bacteria 7824
81 Ga0207695_10051892 3300025913 Bacteria 4302
82 Ga0207695_10072918 3300025913 Bacteria 3501
83 Ga0207693_10000025 3300025915 Bacteria 124008
84 Ga0207693_10000556 3300025915 Bacteria 33738
85 Ga0207663_10001553 3300025916 Bacteria 10756
86 Ga0207660_10000081 3300025917 Bacteria 50936
87 Ga0207657_10015681 3300025919 Bacteria 7331
88 Ga0207657_10029463 3300025919 Bacteria 4996
89 Ga0207652_10000407 3300025921 Bacteria 44687
90 Ga0207652_10018219 3300025921 Bacteria 5757
91 Ga0207694_10046495 3300025924 Bacteria 3355
92 Ga0207700_10000005 3300025928 Bacteria 394836
93 Ga0207700_10017642 3300025928 Bacteria 4773
94 Ga0207664_10007238 3300025929 Bacteria 7687
95 Ga0207690_10033394 3300025932 Bacteria 3308
96 Ga0207711_10000001 3300025941 Bacteria 1325674
97 Ga0207667_10020370 3300025949 Bacteria 7379
98 Ga0207667_10036627 3300025949 Bacteria 5255
99 Ga0207703_10007767 3300026035 Bacteria 8488
100 Ga0207702_10000055 3300026078 Bacteria 136325
101 Ga0207702_10004324 3300026078 Bacteria 12670
102 Ga0207648_10031147 3300026089 Bacteria 4716
103 Ga0207674_10000004 3300026116 Bacteria 241430
104 Ga0207674_10029297 3300026116 Bacteria 5796
105 Ga0207683_10007355 3300026121 Bacteria 9438
106 Ga0207683_10012128 3300026121 Bacteria 7358
107 Ga0268266_10003220 3300028379 Bacteria 16493
108 Ga0268266_10013817 3300028379 Bacteria 6950
109 Ga0265318_10000017 3300028577 Bacteria 174748
110 Ga0265338_10029836 3300028800 Bacteria 5396
111 Ga0265338_10046190 3300028800 Bacteria 3993
112 Ga0265320_10000155 3300031240 Bacteria 57130
113 Ga0265325_10000083 3300031241 Bacteria 66086
114 Ga0265325_10000281 3300031241 Bacteria 36084
115 Ga0265325_10002890 3300031241 Bacteria 11451
116 Ga0265325_10008526 3300031241 Bacteria 6042
117 Ga0265340_10000034 3300031247 Bacteria 65594
118 Ga0265340_10001416 3300031247 Bacteria 13764
119 Ga0265340_10010872 3300031247 Bacteria 4856
120 Ga0265340_10015271 3300031247 Bacteria 3994
121 Ga0265340_10022386 3300031247 Bacteria 3232
122 Ga0265339_10003079 3300031249 Bacteria 11739
123 Ga0265339_10011741 3300031249 Bacteria 5375
124 Ga0265339_10026834 3300031249 Bacteria 3295
125 Ga0265331_10018136 3300031250 Bacteria 3656
126 Ga0265316_10009159 3300031344 Bacteria 9122
127 Ga0265316_10014684 3300031344 Bacteria 6878
128 Ga0265316_10033332 3300031344 Bacteria 4195
129 Ga0265313_10002103 3300031595 Bacteria 17759
130 Ga0265313_10002245 3300031595 Bacteria 16985
131 Ga0265313_10004161 3300031595 Bacteria 11240
132 Ga0265313_10006732 3300031595 Bacteria 8039
133 Ga0265314_10009005 3300031711 Bacteria 8490
134 Ga0265314_10011279 3300031711 Bacteria 7392
135 Ga0307406_10000238 3300031901 Bacteria 33353
136 Ga0307412_10002126 3300031911 Bacteria 10990
137 Ga0307414_10007956 3300032004 Bacteria 5986
138 Ga0373939_0003372 3300035114 Bacteria 3751
139 Ga0373943_0000902 3300035170 Bacteria 13104
140 Ga0373937_0002937 3300036401 Bacteria 14259
141 Ga0373937_0007826 3300036401 Bacteria 9262
142 Ga0373937_0015295 3300036401 Bacteria 6785
143 Ga0373937_0074694 3300036401 Bacteria 3128
144 Ga0395899_0000016 3300037312 Bacteria 468322
145 Ga0395900_0078726 3300037418 Bacteria 3387
146 Ga0395901_0014016 3300038443 Bacteria 8159
147 Ga0436365_1143171 3300039437 Bacteria 11960
148 Ga0436365_1599291 3300039437 Bacteria 30297
149 Ga0436361_1195180 3300039447 Bacteria 7751
150 Ga0436363_1377394 3300039450 Bacteria 13484
151 Ga0466959_0021154 3300045049 Bacteria 4796
152 Ga0495622_0004294 3300046557 Bacteria 6634
153 Ga0495622_0014377 3300046557 Bacteria 3676
154 Ga0495633_0000162 3300046558 Bacteria 87434
155 Ga0495658_0000143 3300046683 Bacteria 39833
156 Ga0495649_0001383 3300046694 Bacteria 18325
157 Ga0496121_0002408 3300048924 Bacteria 28667
158 Ga0496122_0002765 3300048925 Bacteria 24195
159 Ga0496123_0002175 3300048926 Bacteria 25005
160 Ga0496125_0004088 3300048928 Bacteria 17072
161 Ga0501031_0003332 3300049568 Bacteria 10309
162 Ga0501032_0006360 3300049569 Bacteria 8705
163 Ga0501033_0004869 3300049570 Bacteria 10692
164 Ga0501033_0013612 3300049570 Bacteria 6192
165 Ga0501033_0017541 3300049570 Bacteria 5408
166 Ga0501033_0045678 3300049570 Bacteria 3258
167 Ga0501034_0004741 3300049571 Bacteria 15051
168 Ga0501036_0016525 3300049572 Bacteria 6163
169 Ga0501037_0007432 3300049573 Bacteria 8012
170 Ga0501038_0013847 3300049574 Bacteria 7349
171 Ga0501038_0063091 3300049574 Bacteria 3164
172 Ga0501039_0001645 3300049575 Bacteria 16475
173 Ga0501040_0027874 3300049576 Bacteria 3805
174 Ga0501043_0013921 3300049579 Bacteria 6293
175 Ga0501043_0044410 3300049579 Bacteria 3494
176 Ga0501046_0003021 3300049580 Bacteria 15548
177 Ga0501046_0004030 3300049580 Bacteria 13407
178 Ga0501047_0010094 3300049581 Bacteria 8924
179 Ga0501047_0016566 3300049581 Bacteria 7037
180 Ga0501047_0021816 3300049581 Bacteria 6149
181 Ga0501047_0027988 3300049581 Bacteria 5432
182 Ga0501047_0031868 3300049581 Bacteria 5086
183 Ga0501048_0000472 3300049582 Bacteria 28173
184 Ga0501067_0001461 3300049583 Bacteria 12841
185 Ga0501069_0002602 3300049585 Bacteria 9210
186 Ga0501070_0004815 3300049586 Bacteria 11537
187 Ga0501072_0001154 3300049588 Bacteria 19642
188 Ga0501073_0006549 3300049589 Bacteria 8666
189 Ga0501073_0023846 3300049589 Bacteria 4394
190 Ga0501074_0004387 3300049590 Bacteria 10082
191 Ga0501079_0048752 3300049741 Bacteria 3268
192 Ga0501080_0001040 3300049742 Bacteria 22818
193 Ga0501083_0003238 3300049744 Bacteria 11358
194 Ga0501083_0007882 3300049744 Bacteria 7543
195 Ga0501035_0004252 3300049822 Bacteria 13589
196 Ga0501035_0078431 3300049822 Bacteria 2917
197 Ga0501044_0001437 3300049823 Bacteria 27990
198 Ga0501044_0008199 3300049823 Bacteria 11462
199 Ga0501044_0016185 3300049823 Bacteria 8015
200 Ga0501044_0024209 3300049823 Bacteria 6450
201 Ga0501044_0031291 3300049823 Bacteria 5601
202 Ga0501044_0052166 3300049823 Bacteria 4215
203 Ga0501044_0070938 3300049823 Bacteria 3543
204 nmdc:mga08y16_39147_c1 3300050511 Bacteria 4974
205 nmdc:mga08x19_51_c1 3300050514 Bacteria 124093
206 Ga0500643_000006 3300053087 Bacteria 479605
207 Ga0500651_0018143 3300053093 Bacteria 4353
208 Ga0500595_003115 3300053119 Bacteria 7852
209 Ga0500573_0000006 3300053140 Bacteria 285988
210 Ga0501084_0000081 3300054114 Bacteria 70009
211 Ga0501084_0001077 3300054114 Bacteria 21242
212 Ga0501084_0028232 3300054114 Bacteria 4689
213 Ga0501082_0003268 3300060353 Bacteria 14152

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2977240413 2977240946 775
2 3300035170 Ga0373943_0000902 Ga0373943_0000902_7695_10121 783
3 3300049581 Ga0501047_0031868 Ga0501047_0031868_25_2628 863
4 3300049822 Ga0501035_0078431 Ga0501035_0078431_290_2893 863
5 3300049823 Ga0501044_0031291 Ga0501044_0031291_25_2628 863
6 3300028577 Ga0265318_10000017 Ga0265318_1000001783 889
7 3300025913 Ga0207695_10072918 Ga0207695_100729182 890
8 3300005335 Ga0070666_10000613 Ga0070666_1000061314 891
9 3300025903 Ga0207680_10002296 Ga0207680_100022965 891
10 3300025928 Ga0207700_10017642 Ga0207700_100176424 896
11 3300031241 Ga0265325_10000281 Ga0265325_100002814 898
12 3300031249 Ga0265339_10011741 Ga0265339_100117412 898
13 3300005548 Ga0070665_100026496 Ga0070665_1000264964 899
14 3300028379 Ga0268266_10013817 Ga0268266_100138174 899
15 3300028800 Ga0265338_10029836 Ga0265338_100298363 908
16 3300049570 Ga0501033_0017541 Ga0501033_0017541_2031_4937 908
17 3300039450 Ga0436363_1377394 Ga0436363_1377394_9102_11924 910
18 3300031901 Ga0307406_10000238 Ga0307406_1000023832 913
19 3300054114 Ga0501084_0000081 Ga0501084_0000081_56934_59687 915
20 3300003781 Ga0055536_1000937 Ga0055536_100093714 916
21 3300003781 Ga0055536_1002742 Ga0055536_10027427 916
22 3300025292 Ga0209676_1000038 Ga0209676_1000038225 916
23 3300025304 Ga0209257_1000306 Ga0209257_100030651 916
24 3300031911 Ga0307412_10002126 Ga0307412_100021269 916
25 3300053093 Ga0500651_0018143 Ga0500651_0018143_1031_3916 918
26 3300005436 Ga0070713_100012015 Ga0070713_1000120153 919
27 3300025292 Ga0209676_1001119 Ga0209676_100111930 919
28 3300036401 Ga0373937_0074694 Ga0373937_0074694_60_2945 919
29 3300021384 Ga0213876_10000370 Ga0213876_1000037021 920
30 3300031240 Ga0265320_10000155 Ga0265320_1000015512 920
31 3300031241 Ga0265325_10002890 Ga0265325_100028905 920
32 3300039437 Ga0436365_1599291 Ga0436365_1599291_13367_16135 920
33 3300031249 Ga0265339_10003079 Ga0265339_100030795 921
34 3300005334 Ga0068869_100001403 Ga0068869_10000140314 923
35 3300013297 Ga0157378_10016138 Ga0157378_100161382 925
36 3300003578 Ga0006562J51391_1088773 Ga0006562J51391_10887738 926
37 3300048925 Ga0496122_0002765 Ga0496122_0002765_19778_22702 926
38 3300048926 Ga0496123_0002175 Ga0496123_0002175_20662_23586 926
39 3300049823 Ga0501044_0024209 Ga0501044_0024209_1393_4293 926
40 3300005364 Ga0070673_100012112 Ga0070673_1000121123 928
41 3300005459 Ga0068867_100022527 Ga0068867_1000225272 928
42 3300025907 Ga0207645_10012560 Ga0207645_100125602 928
43 3300026089 Ga0207648_10031147 Ga0207648_100311472 928
44 3300031247 Ga0265340_10000034 Ga0265340_100000346 928
45 3300031344 Ga0265316_10014684 Ga0265316_100146843 928
46 3300037312 Ga0395899_0000016 Ga0395899_0000016_352631_355567 928
47 3300049823 Ga0501044_0016185 Ga0501044_0016185_492_3395 929
48 3300031241 Ga0265325_10008526 Ga0265325_100085262 930
49 3300031249 Ga0265339_10026834 Ga0265339_100268342 930
50 3300031250 Ga0265331_10018136 Ga0265331_100181362 930
51 3300031595 Ga0265313_10006732 Ga0265313_100067323 930
52 3300025913 Ga0207695_10051892 Ga0207695_100518922 931
53 3300053140 Ga0500573_0000006 Ga0500573_0000006_250883_253744 931
54 3300049585 Ga0501069_0002602 Ga0501069_0002602_2463_5321 932
55 3300046683 Ga0495658_0000143 Ga0495658_0000143_26740_29679 933
56 3300013105 Ga0157369_10017090 Ga0157369_100170906 934
57 3300025932 Ga0207690_10033394 Ga0207690_100333942 935
58 iso_pu_bacteria 2941485952 2941486306 935
59 3300005336 Ga0070680_100000505 Ga0070680_10000050513 936
60 3300005458 Ga0070681_10000003 Ga0070681_10000003125 936
61 3300005530 Ga0070679_100000063 Ga0070679_10000006310 936
62 3300025912 Ga0207707_10000001 Ga0207707_10000001926 936
63 3300025917 Ga0207660_10000081 Ga0207660_1000008143 936
64 3300025921 Ga0207652_10000407 Ga0207652_100004074 936
65 3300005539 Ga0068853_100018238 Ga0068853_1000182383 937
66 3300005614 Ga0068856_100007281 Ga0068856_1000072817 937
67 3300009093 Ga0105240_10002102 Ga0105240_1000210213 937
68 3300009174 Ga0105241_10005992 Ga0105241_100059921 937
69 3300009545 Ga0105237_10007476 Ga0105237_100074764 937
70 3300009551 Ga0105238_10004371 Ga0105238_100043718 937
71 3300013100 Ga0157373_10001939 Ga0157373_100019396 937
72 3300013104 Ga0157370_10006211 Ga0157370_100062119 937
73 3300013105 Ga0157369_10001941 Ga0157369_100019416 937
74 3300014968 Ga0157379_10018393 Ga0157379_100183933 937
75 3300026078 Ga0207702_10004324 Ga0207702_100043245 937
76 3300026116 Ga0207674_10000004 Ga0207674_10000004187 937
77 iso_pu_bacteria 2643221663 2644353218 937
78 iso_pu_bacteria 2643221699 2644551231 937
79 3300049568 Ga0501031_0003332 Ga0501031_0003332_1003_3861 938
80 3300049569 Ga0501032_0006360 Ga0501032_0006360_3544_6402 938
81 3300049570 Ga0501033_0004869 Ga0501033_0004869_7769_10627 938
82 3300049571 Ga0501034_0004741 Ga0501034_0004741_6124_8982 938
83 3300049572 Ga0501036_0016525 Ga0501036_0016525_1089_3947 938
84 3300049574 Ga0501038_0013847 Ga0501038_0013847_3531_6389 938
85 3300049575 Ga0501039_0001645 Ga0501039_0001645_13545_16403 938
86 3300049576 Ga0501040_0027874 Ga0501040_0027874_808_3666 938
87 3300049579 Ga0501043_0013921 Ga0501043_0013921_3414_6272 938
88 3300049580 Ga0501046_0004030 Ga0501046_0004030_8052_10910 938
89 3300049582 Ga0501048_0000472 Ga0501048_0000472_21706_24564 938
90 3300049583 Ga0501067_0001461 Ga0501067_0001461_7768_10626 938
91 3300049586 Ga0501070_0004815 Ga0501070_0004815_3685_6543 938
92 3300049589 Ga0501073_0006549 Ga0501073_0006549_4848_7706 938
93 3300049590 Ga0501074_0004387 Ga0501074_0004387_4848_7706 938
94 3300049741 Ga0501079_0048752 Ga0501079_0048752_89_2947 938
95 3300049742 Ga0501080_0001040 Ga0501080_0001040_2570_5428 938
96 3300049744 Ga0501083_0003238 Ga0501083_0003238_8489_11347 938
97 3300054114 Ga0501084_0001077 Ga0501084_0001077_4872_7730 938
98 3300060353 Ga0501082_0003268 Ga0501082_0003268_4846_7704 938
99 3300039447 Ga0436361_1195180 Ga0436361_1195180_675_3617 941
100 iso_pu_bacteria 2643221574 2643883970 941
101 iso_pu_bacteria 2643221699 2644549630 941
102 3300014968 Ga0157379_10003605 Ga0157379_100036052 942
103 3300032004 Ga0307414_10007956 Ga0307414_100079564 942
104 3300036401 Ga0373937_0015295 Ga0373937_0015295_418_3345 942
105 3300048928 Ga0496125_0004088 Ga0496125_0004088_13844_16741 942
106 iso_pu_bacteria 2928972540 2928974087 942
107 3300006237 Ga0097621_100017266 Ga0097621_1000172662 943
108 3300010375 Ga0105239_10034629 Ga0105239_100346293 943
109 3300031595 Ga0265313_10004161 Ga0265313_100041617 943
110 3300005436 Ga0070713_100000262 Ga0070713_10000026217 944
111 3300005614 Ga0068856_100004359 Ga0068856_1000043592 944
112 3300006175 Ga0070712_100000171 Ga0070712_10000017115 944
113 3300006914 Ga0075436_100000543 Ga0075436_10000054321 944
114 3300014325 Ga0163163_10000004 Ga0163163_10000004319 944
115 3300025915 Ga0207693_10000556 Ga0207693_1000055619 944
116 3300025928 Ga0207700_10000005 Ga0207700_10000005424 944
117 3300025929 Ga0207664_10007238 Ga0207664_100072383 944
118 3300026078 Ga0207702_10000055 Ga0207702_100000559 944
119 3300045049 Ga0466959_0021154 Ga0466959_0021154_736_3624 944
120 3300050514 nmdc:mga08x19_51_c1 nmdc:mga08x19_51_c1_20409_23294 944
121 3300026116 Ga0207674_10029297 Ga0207674_100292973 945
122 3300046694 Ga0495649_0001383 Ga0495649_0001383_12772_15675 945
123 3300005842 Ga0068858_100025068 Ga0068858_1000250684 946
124 3300026035 Ga0207703_10007767 Ga0207703_100077672 946
125 3300046558 Ga0495633_0000162 Ga0495633_0000162_70146_73067 946
126 3300048924 Ga0496121_0002408 Ga0496121_0002408_5978_8821 946
127 3300049570 Ga0501033_0013612 Ga0501033_0013612_973_3852 947
128 3300049573 Ga0501037_0007432 Ga0501037_0007432_223_3069 947
129 3300049579 Ga0501043_0044410 Ga0501043_0044410_561_3407 947
130 3300049822 Ga0501035_0004252 Ga0501035_0004252_9241_12120 947
131 3300049823 Ga0501044_0001437 Ga0501044_0001437_20835_23714 947
132 3300049823 Ga0501044_0008199 Ga0501044_0008199_3257_6103 947
133 3300005327 Ga0070658_10006624 Ga0070658_100066245 948
134 3300005548 Ga0070665_100001553 Ga0070665_10000155315 948
135 3300006237 Ga0097621_100002762 Ga0097621_1000027624 948
136 3300006358 Ga0068871_100001266 Ga0068871_1000012664 948
137 3300009551 Ga0105238_10047330 Ga0105238_100473301 948
138 3300025919 Ga0207657_10015681 Ga0207657_100156815 948
139 3300025921 Ga0207652_10018219 Ga0207652_100182192 948
140 3300028379 Ga0268266_10003220 Ga0268266_100032206 948
141 3300028800 Ga0265338_10046190 Ga0265338_100461902 948
142 3300046557 Ga0495622_0004294 Ga0495622_0004294_492_3341 948
143 3300049574 Ga0501038_0063091 Ga0501038_0063091_236_3085 948
144 3300049581 Ga0501047_0027988 Ga0501047_0027988_245_3094 948
145 3300049589 Ga0501073_0023846 Ga0501073_0023846_239_3088 948
146 3300005327 Ga0070658_10017895 Ga0070658_100178952 949
147 3300005535 Ga0070684_100019778 Ga0070684_1000197782 949
148 3300005539 Ga0068853_100027307 Ga0068853_1000273072 949
149 3300005548 Ga0070665_100029549 Ga0070665_1000295492 949
150 3300005563 Ga0068855_100050045 Ga0068855_1000500452 949
151 3300005614 Ga0068856_100048910 Ga0068856_1000489102 949
152 3300005843 Ga0068860_100038007 Ga0068860_1000380073 949
153 3300025261 Ga0209233_1000006 Ga0209233_1000006254 949
154 3300025297 Ga0209758_1000008 Ga0209758_1000008765 949
155 3300025903 Ga0207680_10003338 Ga0207680_100033383 949
156 3300025919 Ga0207657_10029463 Ga0207657_100294632 949
157 3300026121 Ga0207683_10007355 Ga0207683_100073552 949
158 3300049581 Ga0501047_0016566 Ga0501047_0016566_235_3105 949
159 3300053119 Ga0500595_003115 Ga0500595_003115_2957_5809 949
160 3300005456 Ga0070678_100008048 Ga0070678_1000080482 950
161 3300005548 Ga0070665_100015467 Ga0070665_1000154675 950
162 3300013306 Ga0163162_10035365 Ga0163162_100353652 950
163 3300014968 Ga0157379_10010777 Ga0157379_100107773 950
164 3300026121 Ga0207683_10012128 Ga0207683_100121287 950
165 3300031344 Ga0265316_10033332 Ga0265316_100333322 950
166 3300038443 Ga0395901_0014016 Ga0395901_0014016_5278_8133 950
167 3300005548 Ga0070665_100050853 Ga0070665_1000508532 951
168 3300009093 Ga0105240_10062749 Ga0105240_100627491 951
169 3300009551 Ga0105238_10061412 Ga0105238_100614122 951
170 3300025949 Ga0207667_10020370 Ga0207667_100203704 951
171 3300031247 Ga0265340_10010872 Ga0265340_100108722 951
172 3300031711 Ga0265314_10009005 Ga0265314_100090055 951
173 3300005439 Ga0070711_100025171 Ga0070711_1000251711 953
174 3300025916 Ga0207663_10001553 Ga0207663_100015538 953
175 3300036401 Ga0373937_0002937 Ga0373937_0002937_10936_13821 953
176 3300049744 Ga0501083_0007882 Ga0501083_0007882_3043_5907 953
177 3300006175 Ga0070712_100000318 Ga0070712_10000031814 954
178 3300025915 Ga0207693_10000025 Ga0207693_1000002537 954
179 3300053087 Ga0500643_000006 Ga0500643_000006_402871_405738 954
180 3300014968 Ga0157379_10000489 Ga0157379_1000048915 956
181 3300021384 Ga0213876_10003633 Ga0213876_100036332 956
182 3300031247 Ga0265340_10015271 Ga0265340_100152712 956
183 3300035114 Ga0373939_0003372 Ga0373939_0003372_325_3246 956
184 3300036401 Ga0373937_0007826 Ga0373937_0007826_3851_6862 956
185 3300039437 Ga0436365_1143171 Ga0436365_1143171_4354_7263 956
186 3300049580 Ga0501046_0003021 Ga0501046_0003021_5039_7918 956
187 3300049581 Ga0501047_0010094 Ga0501047_0010094_2174_5053 956
188 3300049823 Ga0501044_0052166 Ga0501044_0052166_1139_4018 956
189 3300009093 Ga0105240_10004130 Ga0105240_100041306 957
190 3300009093 Ga0105240_10006591 Ga0105240_1000659110 957
191 3300009093 Ga0105240_10045205 Ga0105240_100452053 957
192 3300009551 Ga0105238_10006862 Ga0105238_100068624 957
193 3300010375 Ga0105239_10009987 Ga0105239_100099879 957
194 3300025913 Ga0207695_10004187 Ga0207695_100041876 957
195 3300025913 Ga0207695_10019436 Ga0207695_100194365 957
196 3300025924 Ga0207694_10046495 Ga0207694_100464953 957
197 3300025949 Ga0207667_10036627 Ga0207667_100366272 957
198 3300031711 Ga0265314_10011279 Ga0265314_100112794 957
199 3300037418 Ga0395900_0078726 Ga0395900_0078726_458_3334 957
200 3300049570 Ga0501033_0045678 Ga0501033_0045678_168_3044 957
201 3300049581 Ga0501047_0021816 Ga0501047_0021816_2663_5539 957
202 3300014968 Ga0157379_10019226 Ga0157379_100192264 958
203 3300031241 Ga0265325_10000083 Ga0265325_100000832 958
204 3300031344 Ga0265316_10009159 Ga0265316_100091592 958
205 3300031595 Ga0265313_10002245 Ga0265313_1000224514 958
206 iso_pu_bacteria 2523231067 2523466167 958
207 iso_pu_bacteria 2738543031 2739347108 958
208 3300013307 Ga0157372_10014805 Ga0157372_100148056 959
209 3300031247 Ga0265340_10001416 Ga0265340_100014169 959
210 3300031595 Ga0265313_10002103 Ga0265313_100021035 959
211 iso_pu_bacteria 2917554339 2917557861 959
212 3300005937 Ga0081455_10001848 Ga0081455_1000184811 961
213 3300005937 Ga0081455_10015228 Ga0081455_100152289 961
214 3300009094 Ga0111539_10065614 Ga0111539_100656142 961
215 3300046557 Ga0495622_0014377 Ga0495622_0014377_16_2931 961
216 3300050511 nmdc:mga08y16_39147_c1 nmdc:mga08y16_39147_c1_140_3046 961
217 3300025941 Ga0207711_10000001 Ga0207711_10000001903 962
218 3300031247 Ga0265340_10022386 Ga0265340_100223862 962
219 3300049588 Ga0501072_0001154 Ga0501072_0001154_5191_8100 962
220 3300049823 Ga0501044_0070938 Ga0501044_0070938_40_2943 962
221 3300054114 Ga0501084_0028232 Ga0501084_0028232_1491_4388 962
222 3300003320 rootH2_10027638 rootH2_100276386 963
223 3300005341 Ga0070691_10001835 Ga0070691_100018356 963

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

586

833

0.95

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

70

314

0.89

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

333

477

0.87

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

851

985

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.8689 467 961
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.8623 467 931
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8594 11 446
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8481 11 446
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.8474 467 961
ID Description Score Start End Superfamily
3k7dA02 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9467 568 806 3.30.460.10
3k7dA02 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9031 568 806 3.30.460.10
1v4aA03 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.8707 293 446 1.20.120.330
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.8655 296 449 1.20.120.330
af_P9WN27_98_319_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.8616 571 803 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A7V9MZJ4-F1-model_v4 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase domain-containing protein 0.9866 782 961 GO:0000820
GO:0005829
GO:0008882
AF-A0A1E3WFX8-F1-model_v4 Glutamate-ammonia ligase adenylyltransferase repeated domain-containing protein 0.9831 636 908 GO:0000820
GO:0005524
GO:0005829
GO:0008882
AF-A0A1J5PK48-F1-model_v4 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) 0.9795 665 959 GO:0000820
GO:0005524
GO:0005829
GO:0008882
GO:0016874
AF-A0A528C9A9-F1-model_v4 Bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase 0.9784 612 859 GO:0000820
GO:0005829
GO:0008882
AF-A0A3B8XQZ8-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC 2.7.7.42) 0.9766 811 960 GO:0000820
GO:0005829
GO:0008882

Feature Viewer

pLDDT pTM Quality
88.64 0.62 Medium
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Predicted Structure (AlphaFold2)

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