F335611

General Info

Members Datasets Scaffolds Average Seq Length
223 129 446 262

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10102111|Ga0163163_101021113
Length 318
Sequence LVERAGLGEERYCYVISVGSLVWITGESLQPILLADRPIGCDLGHTSGRADPADTLPAVAAAKVRLDQLLAQRGLFPTRTRAAASVMAGEVRVGDQVADKPGRLVATDIEVSVAGGRRFVSRGGIKLSNALEALGVPVQGRRCMDVGASTGGFTDCLLKQGAAGVIAVDVAYGELAWELRTDDRVTVLERVNARALAPGDLPYRPELIVIDVSFISLLKVLPAVLRCATDRFDCLAMVKPQFEVGRDRIGKNGVVRDVHDRREAVLEVARGAGTAVLGFAPSGLPGPKGNRETFVWLAESGREDAVGDLVAAIAEVDV

Samples

Sample ID Description Type Environment
1 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
129 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 12.56
Rhizosphere 76.23
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163163_10102111 3300014325 Bacteria 2891
2 JGI25407J50210_10006276 3300003373 Bacteria 2954
3 Ga0070658_10016999 3300005327 Bacteria 5821
4 Ga0070676_10154509 3300005328 Bacteria 1472
5 Ga0070683_100044379 3300005329 Bacteria 4099
6 Ga0068869_100458382 3300005334 Bacteria 1058
7 Ga0070660_100257330 3300005339 Bacteria 1425
8 Ga0070661_100007595 3300005344 Bacteria 7478
9 Ga0070669_100106220 3300005353 Bacteria 2125
10 Ga0070671_100563982 3300005355 Bacteria 982
11 Ga0070674_100181382 3300005356 Bacteria 1613
12 Ga0070659_100019335 3300005366 Bacteria 5159
13 Ga0070714_100882839 3300005435 Bacteria 868
14 Ga0070713_100281678 3300005436 Bacteria 1525
15 Ga0070705_100010336 3300005440 Bacteria 4670
16 Ga0070663_100363193 3300005455 Bacteria 1175
17 Ga0070681_10101593 3300005458 Bacteria 2821
18 Ga0070679_100042337 3300005530 Bacteria 4534
19 Ga0070679_100207618 3300005530 Bacteria 1923
20 Ga0070684_100057115 3300005535 Bacteria 3407
21 Ga0070684_100193815 3300005535 Bacteria 1850
22 Ga0070696_100354449 3300005546 Bacteria 1137
23 Ga0070665_100003377 3300005548 Bacteria 17082
24 Ga0070704_100114638 3300005549 Bacteria 2057
25 Ga0070664_100460282 3300005564 Bacteria 1169
26 Ga0068854_100281307 3300005578 Bacteria 1340
27 Ga0068866_10019782 3300005718 Bacteria 3072
28 Ga0068861_100039028 3300005719 Bacteria 3542
29 Ga0068858_100069396 3300005842 Bacteria 3267
30 Ga0068858_100210706 3300005842 Bacteria 1839
31 Ga0068862_100535835 3300005844 Bacteria 1116
32 Ga0081538_10000406 3300005981 Bacteria 48785
33 Ga0081538_10001061 3300005981 Bacteria 29289
34 Ga0081538_10019808 3300005981 Bacteria 4978
35 Ga0081538_10020684 3300005981 Bacteria 4832
36 Ga0081538_10025745 3300005981 Bacteria 4137
37 Ga0081538_10038165 3300005981 Bacteria 3105
38 Ga0081538_10058736 3300005981 Bacteria 2228
39 Ga0081539_10001664 3300005985 Bacteria 36008
40 Ga0081539_10044496 3300005985 Bacteria 2562
41 Ga0081539_10045577 3300005985 Bacteria 2520
42 Ga0070717_10000001 3300006028 Bacteria 465573
43 Ga0070717_10341218 3300006028 Bacteria 1338
44 Ga0070712_100000022 3300006175 Bacteria 81392
45 Ga0075431_100006364 3300006847 Bacteria 11723
46 Ga0075434_100421432 3300006871 Bacteria 1356
47 Ga0075429_100043408 3300006880 Bacteria 3912
48 Ga0075435_100671867 3300007076 Bacteria 900
49 Ga0105240_10067878 3300009093 Bacteria 4419
50 Ga0111539_10342943 3300009094 Bacteria 1739
51 Ga0111539_10352726 3300009094 Bacteria 1712
52 Ga0105245_10161723 3300009098 Bacteria 2125
53 Ga0105243_10009996 3300009148 Bacteria 7212
54 Ga0105242_10080421 3300009176 Bacteria 2724
55 Ga0105248_10191475 3300009177 Bacteria 2305
56 Ga0105238_10025967 3300009551 Bacteria 5971
57 Ga0105249_10134356 3300009553 Bacteria 2365
58 Ga0105249_10349011 3300009553 Bacteria 1498
59 Ga0105239_10391683 3300010375 Bacteria 1572
60 Ga0105239_10572905 3300010375 Bacteria 1287
61 Ga0157372_10638806 3300013307 Bacteria 1240
62 Ga0163163_10176695 3300014325 Bacteria 2182
63 Ga0163163_10413379 3300014325 Bacteria 1408
64 Ga0157380_10461837 3300014326 Bacteria 1222
65 Ga0157380_10582634 3300014326 Bacteria 1103
66 Ga0157377_10139678 3300014745 Bacteria 1488
67 Ga0206356_10863022 3300020070 Bacteria 2629
68 Ga0213874_10044780 3300021377 Bacteria 1337
69 Ga0213876_10011977 3300021384 Bacteria 4620
70 Ga0213876_10014434 3300021384 Bacteria 4185
71 Ga0213876_10039347 3300021384 Bacteria 2498
72 Ga0213875_10006603 3300021388 Bacteria 6066
73 Ga0213875_10037424 3300021388 Bacteria 2286
74 Ga0213875_10062205 3300021388 Bacteria 1746
75 Ga0207642_10162411 3300025899 Bacteria 1201
76 Ga0207688_10033248 3300025901 Bacteria 2852
77 Ga0207643_10143183 3300025908 Bacteria 1429
78 Ga0207707_10109225 3300025912 Bacteria 2418
79 Ga0207693_10107987 3300025915 Bacteria 2183
80 Ga0207662_10098039 3300025918 Bacteria 1813
81 Ga0207657_10007229 3300025919 Bacteria 11404
82 Ga0207657_10516251 3300025919 Bacteria 935
83 Ga0207649_10443614 3300025920 Bacteria 978
84 Ga0207652_10154413 3300025921 Bacteria 2056
85 Ga0207652_10454061 3300025921 Bacteria 1155
86 Ga0207700_10015735 3300025928 Bacteria 5002
87 Ga0207706_10066698 3300025933 Bacteria 3167
88 Ga0207706_10376977 3300025933 Bacteria 1231
89 Ga0207669_10116755 3300025937 Bacteria 1802
90 Ga0207704_10046291 3300025938 Bacteria 2591
91 Ga0207704_10334202 3300025938 Bacteria 1174
92 Ga0207689_10104886 3300025942 Bacteria 2323
93 Ga0207661_10267146 3300025944 Bacteria 1526
94 Ga0207712_10036923 3300025961 Bacteria 3330
95 Ga0207668_10236106 3300025972 Bacteria 1477
96 Ga0207677_10099062 3300026023 Bacteria 2139
97 Ga0207703_10364394 3300026035 Bacteria 1333
98 Ga0207678_10344824 3300026067 Bacteria 1284
99 Ga0207708_10010242 3300026075 Bacteria 6962
100 Ga0207708_10076342 3300026075 Bacteria 2570
101 Ga0207708_10554253 3300026075 Bacteria 970
102 Ga0207702_10419475 3300026078 Bacteria 1294
103 Ga0207702_10571061 3300026078 Bacteria 1108
104 Ga0207674_10025387 3300026116 Bacteria 6319
105 Ga0207675_100016050 3300026118 Bacteria 6992
106 Ga0207675_100062715 3300026118 Bacteria 3473
107 Ga0207675_100073168 3300026118 Bacteria 3206
108 Ga0207675_100141467 3300026118 Bacteria 2286
109 Ga0268266_10024870 3300028379 Bacteria 5095
110 Ga0268266_10054946 3300028379 Bacteria 3423
111 Ga0265319_1004967 3300028563 Bacteria 6480
112 Ga0307406_10056345 3300031901 Bacteria 2517
113 Ga0307409_100109309 3300031995 Bacteria 2315
114 Ga0307409_100278804 3300031995 Bacteria 1544
115 Ga0307409_100703923 3300031995 Bacteria 1010
116 Ga0307409_100750090 3300031995 Bacteria 980
117 Ga0307414_10887834 3300032004 Bacteria 817
118 Ga0395900_0282497 3300037418 Bacteria 1651
119 Ga0395900_0485193 3300037418 Bacteria 1188
120 Ga0436364_0367504 3300037853 Bacteria 7365
121 Ga0436364_0473067 3300037853 Bacteria 16171
122 Ga0436364_0556903 3300037853 Bacteria 6657
123 Ga0436364_0610799 3300037853 Bacteria 987
124 Ga0436364_0732413 3300037853 Bacteria 1115
125 Ga0436364_1025757 3300037853 Unclassified 946
126 Ga0436364_1370748 3300037853 Bacteria 1294
127 Ga0436364_1396922 3300037853 Bacteria 12005
128 Ga0395901_0085518 3300038443 Bacteria 3297
129 Ga0395901_0521571 3300038443 Bacteria 1207
130 Ga0436365_0096786 3300039437 Bacteria 22201
131 Ga0436365_0383445 3300039437 Bacteria 13228
132 Ga0436365_1226303 3300039437 Bacteria 3668
133 Ga0436365_1317081 3300039437 Bacteria 6736
134 Ga0436365_1431910 3300039437 Bacteria 22184
135 Ga0436365_1620890 3300039437 Bacteria 1031
136 Ga0436365_1743769 3300039437 Bacteria 1544
137 Ga0436363_0712204 3300039450 Bacteria 10061
138 Ga0436363_1435142 3300039450 Bacteria 1380
139 Ga0436362_0622328 3300039453 Bacteria 1586
140 Ga0439463_022146 3300042016 Bacteria 1589
141 Ga0466969_0008448 3300044656 Bacteria 5464
142 Ga0466961_0011864 3300044693 Bacteria 5570
143 Ga0466963_0001862 3300044694 Bacteria 11502
144 Ga0466963_0001928 3300044694 Bacteria 11357
145 Ga0466963_0002720 3300044694 Bacteria 9971
146 Ga0466963_0125273 3300044694 Bacteria 1771
147 Ga0466963_0241915 3300044694 Bacteria 1266
148 Ga0466971_0014235 3300044719 Bacteria 3498
149 Ga0466971_0014990 3300044719 Bacteria 3410
150 Ga0466968_0106845 3300044735 Bacteria 1255
151 Ga0466970_0053154 3300044765 Bacteria 2163
152 Ga0466970_0053990 3300044765 Bacteria 2146
153 Ga0466970_0307584 3300044765 Bacteria 895
154 Ga0466957_0002987 3300044842 Bacteria 9181
155 Ga0466957_0195883 3300044842 Bacteria 1325
156 Ga0466957_0355081 3300044842 Bacteria 995
157 Ga0466960_0035243 3300044901 Bacteria 2337
158 Ga0466959_0015713 3300045049 Bacteria 5521
159 Ga0466959_0027793 3300045049 Bacteria 4195
160 Ga0466959_0114907 3300045049 Bacteria 1918
161 Ga0466959_0117379 3300045049 Bacteria 1894
162 Ga0466959_0118369 3300045049 Bacteria 1885
163 Ga0466959_0180073 3300045049 Bacteria 1479
164 Ga0466959_0207969 3300045049 Bacteria 1360
165 Ga0451576_0500418 3300045051 Bacteria 1277
166 Ga0466958_0005550 3300045836 Bacteria 6800
167 Ga0466958_0039944 3300045836 Bacteria 2820
168 Ga0466958_0064174 3300045836 Bacteria 2239
169 Ga0466958_0077203 3300045836 Bacteria 2045
170 Ga0466958_0120608 3300045836 Bacteria 1641
171 Ga0466967_0029851 3300045976 Bacteria 4569
172 Ga0466967_0051738 3300045976 Bacteria 3601
173 Ga0466967_0067206 3300045976 Bacteria 3197
174 Ga0466967_0067450 3300045976 Bacteria 3191
175 Ga0466967_0073314 3300045976 Bacteria 3071
176 Ga0466967_0267281 3300045976 Bacteria 1638
177 Ga0466967_0291409 3300045976 Bacteria 1568
178 Ga0466967_0437484 3300045976 Bacteria 1277
179 Ga0466967_0522188 3300045976 Bacteria 1167
180 Ga0495603_0218796 3300046455 Bacteria 1099
181 Ga0495664_0416694 3300046477 Bacteria 806
182 Ga0495659_0014968 3300046664 Bacteria 2546
183 Ga0495674_0179507 3300047319 Bacteria 1764
184 Ga0496101_0097633 3300048904 Bacteria 2194
185 Ga0496102_0210285 3300048905 Bacteria 1834
186 Ga0496103_0287923 3300048906 Bacteria 1057
187 Ga0496104_0231737 3300048907 Bacteria 1759
188 Ga0496105_0004730 3300048908 Bacteria 10274
189 Ga0496105_0068589 3300048908 Bacteria 2930
190 Ga0496107_0165890 3300048910 Bacteria 1637
191 Ga0496108_0059491 3300048911 Bacteria 3213
192 Ga0496108_0070507 3300048911 Bacteria 2949
193 Ga0496108_0268380 3300048911 Bacteria 1485
194 Ga0496109_0038903 3300048912 Bacteria 4303
195 Ga0496109_0170047 3300048912 Bacteria 2044
196 Ga0496109_0212010 3300048912 Bacteria 1821
197 Ga0496109_0331292 3300048912 Bacteria 1437
198 Ga0496109_0421950 3300048912 Bacteria 1260
199 Ga0496110_0173067 3300048913 Bacteria 1959
200 Ga0496110_0328272 3300048913 Bacteria 1394
201 Ga0496110_0569425 3300048913 Bacteria 1029
202 Ga0496111_0083915 3300048914 Bacteria 2328
203 Ga0496111_0088331 3300048914 Bacteria 2270
204 Ga0496112_0004334 3300048915 Bacteria 11998
205 Ga0496112_0041689 3300048915 Bacteria 4491
206 Ga0496112_0049831 3300048915 Bacteria 4105
207 Ga0496112_0901316 3300048915 Bacteria 806
208 Ga0496113_0090485 3300048916 Bacteria 2357
209 Ga0496113_0249271 3300048916 Bacteria 1417
210 Ga0496114_0414354 3300048917 Bacteria 1193
211 Ga0496115_0319229 3300048918 Bacteria 1271
212 Ga0501047_0118421 3300049581 Bacteria 2530
213 Ga0501048_0033687 3300049582 Bacteria 3700
214 Ga0501069_0135438 3300049585 Bacteria 1412
215 nmdc:mga09592_31720_c1 3300050508 Bacteria 4403
216 nmdc:mga0qj67_48069_c1 3300050509 Bacteria 3371
217 nmdc:mga06r32_22565_c1 3300050510 Bacteria 5820
218 nmdc:mga08y16_350078_c1 3300050511 Bacteria 1517
219 nmdc:mga0rr50_177478_c1 3300050513 Bacteria 1739
220 Ga0500568_0070851 3300053139 Bacteria 1335
221 Ga0466962_0003499 3300061719 Bacteria 7484
222 Ga0466962_0022646 3300061719 Bacteria 3020
223 Ga0530510_0246779 3300061734 Bacteria 1330
224 Ga0163163_10102111
225 JGI25407J50210_10006276
226 Ga0070658_10016999
227 Ga0070676_10154509
228 Ga0070683_100044379
229 Ga0068869_100458382
230 Ga0070660_100257330
231 Ga0070661_100007595
232 Ga0070669_100106220
233 Ga0070671_100563982
234 Ga0070674_100181382
235 Ga0070659_100019335
236 Ga0070714_100882839
237 Ga0070713_100281678
238 Ga0070705_100010336
239 Ga0070663_100363193
240 Ga0070681_10101593
241 Ga0070679_100042337
242 Ga0070679_100207618
243 Ga0070684_100057115
244 Ga0070684_100193815
245 Ga0070696_100354449
246 Ga0070665_100003377
247 Ga0070704_100114638
248 Ga0070664_100460282
249 Ga0068854_100281307
250 Ga0068866_10019782
251 Ga0068861_100039028
252 Ga0068858_100069396
253 Ga0068858_100210706
254 Ga0068862_100535835
255 Ga0081538_10000406
256 Ga0081538_10001061
257 Ga0081538_10019808
258 Ga0081538_10020684
259 Ga0081538_10025745
260 Ga0081538_10038165
261 Ga0081538_10058736
262 Ga0081539_10001664
263 Ga0081539_10044496
264 Ga0081539_10045577
265 Ga0070717_10000001
266 Ga0070717_10341218
267 Ga0070712_100000022
268 Ga0075431_100006364
269 Ga0075434_100421432
270 Ga0075429_100043408
271 Ga0075435_100671867
272 Ga0105240_10067878
273 Ga0111539_10342943
274 Ga0111539_10352726
275 Ga0105245_10161723
276 Ga0105243_10009996
277 Ga0105242_10080421
278 Ga0105248_10191475
279 Ga0105238_10025967
280 Ga0105249_10134356
281 Ga0105249_10349011
282 Ga0105239_10391683
283 Ga0105239_10572905
284 Ga0157372_10638806
285 Ga0163163_10176695
286 Ga0163163_10413379
287 Ga0157380_10461837
288 Ga0157380_10582634
289 Ga0157377_10139678
290 Ga0206356_10863022
291 Ga0213874_10044780
292 Ga0213876_10011977
293 Ga0213876_10014434
294 Ga0213876_10039347
295 Ga0213875_10006603
296 Ga0213875_10037424
297 Ga0213875_10062205
298 Ga0207642_10162411
299 Ga0207688_10033248
300 Ga0207643_10143183
301 Ga0207707_10109225
302 Ga0207693_10107987
303 Ga0207662_10098039
304 Ga0207657_10007229
305 Ga0207657_10516251
306 Ga0207649_10443614
307 Ga0207652_10154413
308 Ga0207652_10454061
309 Ga0207700_10015735
310 Ga0207706_10066698
311 Ga0207706_10376977
312 Ga0207669_10116755
313 Ga0207704_10046291
314 Ga0207704_10334202
315 Ga0207689_10104886
316 Ga0207661_10267146
317 Ga0207712_10036923
318 Ga0207668_10236106
319 Ga0207677_10099062
320 Ga0207703_10364394
321 Ga0207678_10344824
322 Ga0207708_10010242
323 Ga0207708_10076342
324 Ga0207708_10554253
325 Ga0207702_10419475
326 Ga0207702_10571061
327 Ga0207674_10025387
328 Ga0207675_100016050
329 Ga0207675_100062715
330 Ga0207675_100073168
331 Ga0207675_100141467
332 Ga0268266_10024870
333 Ga0268266_10054946
334 Ga0265319_1004967
335 Ga0307406_10056345
336 Ga0307409_100109309
337 Ga0307409_100278804
338 Ga0307409_100703923
339 Ga0307409_100750090
340 Ga0307414_10887834
341 Ga0395900_0282497
342 Ga0395900_0485193
343 Ga0436364_0367504
344 Ga0436364_0473067
345 Ga0436364_0556903
346 Ga0436364_0610799
347 Ga0436364_0732413
348 Ga0436364_1025757
349 Ga0436364_1370748
350 Ga0436364_1396922
351 Ga0395901_0085518
352 Ga0395901_0521571
353 Ga0436365_0096786
354 Ga0436365_0383445
355 Ga0436365_1226303
356 Ga0436365_1317081
357 Ga0436365_1431910
358 Ga0436365_1620890
359 Ga0436365_1743769
360 Ga0436363_0712204
361 Ga0436363_1435142
362 Ga0436362_0622328
363 Ga0439463_022146
364 Ga0466969_0008448
365 Ga0466961_0011864
366 Ga0466963_0001862
367 Ga0466963_0001928
368 Ga0466963_0002720
369 Ga0466963_0125273
370 Ga0466963_0241915
371 Ga0466971_0014235
372 Ga0466971_0014990
373 Ga0466968_0106845
374 Ga0466970_0053154
375 Ga0466970_0053990
376 Ga0466970_0307584
377 Ga0466957_0002987
378 Ga0466957_0195883
379 Ga0466957_0355081
380 Ga0466960_0035243
381 Ga0466959_0015713
382 Ga0466959_0027793
383 Ga0466959_0114907
384 Ga0466959_0117379
385 Ga0466959_0118369
386 Ga0466959_0180073
387 Ga0466959_0207969
388 Ga0451576_0500418
389 Ga0466958_0005550
390 Ga0466958_0039944
391 Ga0466958_0064174
392 Ga0466958_0077203
393 Ga0466958_0120608
394 Ga0466967_0029851
395 Ga0466967_0051738
396 Ga0466967_0067206
397 Ga0466967_0067450
398 Ga0466967_0073314
399 Ga0466967_0267281
400 Ga0466967_0291409
401 Ga0466967_0437484
402 Ga0466967_0522188
403 Ga0495603_0218796
404 Ga0495664_0416694
405 Ga0495659_0014968
406 Ga0495674_0179507
407 Ga0496101_0097633
408 Ga0496102_0210285
409 Ga0496103_0287923
410 Ga0496104_0231737
411 Ga0496105_0004730
412 Ga0496105_0068589
413 Ga0496107_0165890
414 Ga0496108_0059491
415 Ga0496108_0070507
416 Ga0496108_0268380
417 Ga0496109_0038903
418 Ga0496109_0170047
419 Ga0496109_0212010
420 Ga0496109_0331292
421 Ga0496109_0421950
422 Ga0496110_0173067
423 Ga0496110_0328272
424 Ga0496110_0569425
425 Ga0496111_0083915
426 Ga0496111_0088331
427 Ga0496112_0004334
428 Ga0496112_0041689
429 Ga0496112_0049831
430 Ga0496112_0901316
431 Ga0496113_0090485
432 Ga0496113_0249271
433 Ga0496114_0414354
434 Ga0496115_0319229
435 Ga0501047_0118421
436 Ga0501048_0033687
437 Ga0501069_0135438
438 nmdc:mga09592_31720_c1
439 nmdc:mga0qj67_48069_c1
440 nmdc:mga06r32_22565_c1
441 nmdc:mga08y16_350078_c1
442 nmdc:mga0rr50_177478_c1
443 Ga0500568_0070851
444 Ga0466962_0003499
445 Ga0466962_0022646
446 Ga0530510_0246779

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01479

S4

S4 domain

64

108

0.96

PF01728

FtsJ

FtsJ-like methyltransferase

119

299

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5eov-assembly1.cif.gz_A c-terminal domain of the 16s/23s rrna (cytidine-2'-o)-methyltransferase tlya. 0.9482 36 235
3opn-assembly1.cif.gz_A the crystal structure of a putative hemolysin from lactococcus lactis 0.926 31 234
5eov-assembly1.cif.gz_A c-terminal domain of the 16s/23s rrna (cytidine-2'-o)-methyltransferase tlya. 0.9213 36 235
3opn-assembly1.cif.gz_A the crystal structure of a putative hemolysin from lactococcus lactis 0.9046 31 234
7s0s-assembly1.cif.gz_B m. tuberculosis ribosomal rna methyltransferase tlya bound to m. smegmatis 50s ribosomal subunit 0.846 2 235
ID Description Score Start End Superfamily
5eovA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9482 36 235 3.40.50.150
af_C0P590_106_292_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9331 42 227 3.40.50.150
5eovA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9213 36 235 3.40.50.150
3opnA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.919 31 234 3.40.50.150
af_C0P590_106_292_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9088 42 227 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A0W8G7W9-F1-model_v4 Rna binding methyltransferase ftsj like 0.9812 45 219 GO:0008168
GO:0032259
AF-A0A2N2HPG5-F1-model_v4 TlyA family rRNA (Cytidine-2'-O)-methyltransferase 0.9774 87 218 GO:0008168
GO:0032259
AF-A0A6M5E062-F1-model_v4 TlyA 0.9771 54 205 GO:0008168
GO:0032259
AF-A0A7C0YRQ5-F1-model_v4 TlyA family RNA methyltransferase 0.9762 61 219 GO:0008168
GO:0032259
AF-A0A5P9VIV6-F1-model_v4 TlyA 0.9757 49 227 GO:0008168
GO:0032259

Map