F335221

General Info

Members Datasets Scaffolds Average Seq Length
223 173 446 310

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10018807|Ga0070666_100188074
Length 324
Sequence MTAFNSNPLPVQAAHELPAREAEQRWLVMGLWLEEAVGLIGGEPKCCKSFLALDLAVAVASGTPCLRDPRFAVPRGGRVLLYAAEDALHIVRRRLEGICAARGLALPELDLDVITVPTLRLDLHNDCERLTQTVEQLKPRLLILDPFVRLHRIDENTSGEVAPLLAYLRELQRRHALSVIVVHHAKKGGGKIRAGQALRGSSEFHAWGDSNLYLRRSDQDLTLTIEHRAAPSLAPIMLELTERDAALALEVRSGGAVVAPAGPRPLEERIKEALQQAGGALALADLRQRCRVRNATLHERLRTMTRAGLLLREHQGYRLAAASP

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
58 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
82 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
83 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
84 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
93 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
94 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
95 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
96 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
97 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
98 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
99 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
102 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
103 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
104 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
105 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
118 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
119 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
120 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
160 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
161 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
162 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
163 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
164 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
165 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
166 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
169 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
170 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
171 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
172 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.73
Nodule 0
Rhizoplane 0
Rhizosphere 85.2
Stem 0
Stem Tuber 0
Unclassified 7.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10018807 3300005335 Bacteria 4449
2 LJNas_1001664 3300000546 Bacteria 3010
3 rootH2_10190393 3300003320 Bacteria 5516
4 rootH1_10042904 3300003323 Bacteria 4179
5 rootH1_10252062 3300003323 Unclassified 3129
6 Ga0070683_100070508 3300005329 Unclassified 3260
7 Ga0070680_100247195 3300005336 Bacteria 1508
8 Ga0070692_10053631 3300005345 Bacteria 2103
9 Ga0070669_100341165 3300005353 Bacteria 1214
10 Ga0070671_100352550 3300005355 Bacteria 1256
11 Ga0070705_100007995 3300005440 Bacteria 5227
12 Ga0070700_100013628 3300005441 Bacteria 4570
13 Ga0070694_100027960 3300005444 Bacteria 3666
14 Ga0070708_100019004 3300005445 Bacteria 5762
15 Ga0070708_100052280 3300005445 Unclassified 3622
16 Ga0070681_10079586 3300005458 Bacteria 3234
17 Ga0068867_100020989 3300005459 Bacteria 4658
18 Ga0070685_10206574 3300005466 Bacteria 1279
19 Ga0070706_100022969 3300005467 Bacteria 5744
20 Ga0070706_100024345 3300005467 Bacteria 5573
21 Ga0070707_100027912 3300005468 Bacteria 5369
22 Ga0070707_100511995 3300005468 Bacteria 1162
23 Ga0070698_100029711 3300005471 Bacteria 5672
24 Ga0070699_100151395 3300005518 Bacteria 2052
25 Ga0070697_100011770 3300005536 Bacteria 6844
26 Ga0068853_100056574 3300005539 Bacteria 3383
27 Ga0070672_100284139 3300005543 Bacteria 1400
28 Ga0070695_100137146 3300005545 Bacteria 1692
29 Ga0070696_100216326 3300005546 Bacteria 1436
30 Ga0068857_100151598 3300005577 Bacteria 2100
31 Ga0068857_100227815 3300005577 Bacteria 1704
32 Ga0068856_100451752 3300005614 Bacteria 1306
33 Ga0068859_100039913 3300005617 Bacteria 4711
34 Ga0068859_100187312 3300005617 Bacteria 2153
35 Ga0068864_100129195 3300005618 Bacteria 2268
36 Ga0068861_100024135 3300005719 Bacteria 4394
37 Ga0068870_10054431 3300005840 Bacteria 2128
38 Ga0068863_100025337 3300005841 Bacteria 5655
39 Ga0068863_100266415 3300005841 Bacteria 1657
40 Ga0068858_100023082 3300005842 Bacteria 5803
41 Ga0068858_100076432 3300005842 Bacteria 3109
42 Ga0068860_100002357 3300005843 Bacteria 19849
43 Ga0068860_100025462 3300005843 Bacteria 5708
44 Ga0068860_100027636 3300005843 Bacteria 5463
45 Ga0068860_100171021 3300005843 Bacteria 2099
46 Ga0068862_100026672 3300005844 Bacteria 4857
47 Ga0081455_10036680 3300005937 Bacteria 4361
48 Ga0075428_100328412 3300006844 Unclassified 1643
49 Ga0075433_10020910 3300006852 Bacteria 5480
50 Ga0075434_100032612 3300006871 Bacteria 5137
51 Ga0068865_100077225 3300006881 Bacteria 2379
52 Ga0097620_100039916 3300006931 Bacteria 4711
53 Ga0097620_100187328 3300006931 Bacteria 2153
54 Ga0075435_100020738 3300007076 Bacteria 5043
55 Ga0099795_10001463 3300007788 Bacteria 5133
56 Ga0111539_10026034 3300009094 Bacteria 7160
57 Ga0111539_10058037 3300009094 Bacteria 4593
58 Ga0105247_10042553 3300009101 Unclassified 2782
59 Ga0105243_10020414 3300009148 Bacteria 5023
60 Ga0105248_10022912 3300009177 Bacteria 6935
61 Ga0163163_10026009 3300014325 Bacteria 5588
62 Ga0182008_10008842 3300014497 Bacteria 5467
63 Ga0157379_10029707 3300014968 Bacteria 4860
64 Ga0157376_10086669 3300014969 Bacteria 2700
65 Ga0182007_10006961 3300015262 Bacteria 4801
66 Ga0213873_10019558 3300021358 Bacteria 1572
67 Ga0213872_10009422 3300021361 Bacteria 4682
68 Ga0213872_10023417 3300021361 Bacteria 2841
69 Ga0213872_10064044 3300021361 Bacteria 1661
70 Ga0213872_10066003 3300021361 Bacteria 1634
71 Ga0213874_10004569 3300021377 Bacteria 3174
72 Ga0213874_10067822 3300021377 Bacteria 1131
73 Ga0213876_10093541 3300021384 Bacteria 1593
74 Ga0213871_10006921 3300021441 Unclassified 2426
75 Ga0224572_1004127 3300024225 Bacteria 2506
76 Ga0207680_10005176 3300025903 Bacteria 6220
77 Ga0207707_10061074 3300025912 Bacteria 3279
78 Ga0207660_10260043 3300025917 Bacteria 1372
79 Ga0207646_10123202 3300025922 Bacteria 2330
80 Ga0207709_10013527 3300025935 Bacteria 4502
81 Ga0207691_10132814 3300025940 Bacteria 2198
82 Ga0207711_10015852 3300025941 Bacteria 6252
83 Ga0207712_10261878 3300025961 Unclassified 1403
84 Ga0207703_10023520 3300026035 Bacteria 4841
85 Ga0207703_10028763 3300026035 Bacteria 4384
86 Ga0207639_10441211 3300026041 Bacteria 1180
87 Ga0207708_10028382 3300026075 Bacteria 4238
88 Ga0207641_10021384 3300026088 Bacteria 5316
89 Ga0207641_10103631 3300026088 Bacteria 2510
90 Ga0207641_10291510 3300026088 Bacteria 1538
91 Ga0207648_10037402 3300026089 Bacteria 4275
92 Ga0207676_10208404 3300026095 Bacteria 1732
93 Ga0207674_10177651 3300026116 Bacteria 2081
94 Ga0207675_100039550 3300026118 Bacteria 4401
95 Ga0207683_10027943 3300026121 Bacteria 4875
96 Ga0207428_10025236 3300027907 Bacteria 4976
97 Ga0207428_10087846 3300027907 Bacteria 2418
98 Ga0268265_10101833 3300028380 Bacteria 2321
99 Ga0268264_10001757 3300028381 Bacteria 19863
100 Ga0268264_10015831 3300028381 Bacteria 6175
101 Ga0268264_10071753 3300028381 Bacteria 2935
102 Ga0265337_1010785 3300028556 Bacteria 3182
103 Ga0265334_10004605 3300028573 Bacteria 6099
104 Ga0265318_10066891 3300028577 Bacteria 1334
105 Ga0307517_10097810 3300028786 Bacteria 2340
106 Ga0307511_10000953 3300030521 Bacteria 30660
107 Ga0307511_10013271 3300030521 Bacteria 8055
108 Ga0265762_1004258 3300030760 Bacteria 2565
109 Ga0265329_10031466 3300031242 Bacteria 1723
110 Ga0265340_10110395 3300031247 Bacteria 1272
111 Ga0265331_10005917 3300031250 Bacteria 7313
112 Ga0265331_10007017 3300031250 Bacteria 6571
113 Ga0265331_10121633 3300031250 Bacteria 1193
114 Ga0265316_10005183 3300031344 Bacteria 12756
115 Ga0265316_10025499 3300031344 Bacteria 4932
116 Ga0307509_10000576 3300031507 Bacteria 62888
117 Ga0307509_10032590 3300031507 Bacteria 5741
118 Ga0307509_10038485 3300031507 Bacteria 5216
119 Ga0307509_10052727 3300031507 Bacteria 4341
120 Ga0307509_10087115 3300031507 Unclassified 3209
121 Ga0307514_10115805 3300031649 Bacteria 1885
122 Ga0265314_10002921 3300031711 Bacteria 16954
123 Ga0373948_0003811 3300034817 Bacteria 2346
124 Ga0373950_0002073 3300034818 Bacteria 2718
125 Ga0373950_0018082 3300034818 Bacteria 1220
126 Ga0373958_0000584 3300034819 Bacteria 4524
127 Ga0373958_0000624 3300034819 Bacteria 4424
128 Ga0373959_0026536 3300034820 Unclassified 1145
129 Ga0373938_0000924 3300034957 Bacteria 4699
130 Ga0373929_0003238 3300035085 Bacteria 2946
131 Ga0373940_0004550 3300035088 Bacteria 2938
132 Ga0373949_0002671 3300035090 Bacteria 4479
133 Ga0373949_0007975 3300035090 Bacteria 2318
134 Ga0373951_0003448 3300035091 Bacteria 3834
135 Ga0373951_0021987 3300035091 Bacteria 1466
136 Ga0373952_0004224 3300035092 Bacteria 2597
137 Ga0373932_0002711 3300035112 Bacteria 4409
138 Ga0373932_0004182 3300035112 Bacteria 3428
139 Ga0373939_0002353 3300035114 Bacteria 4471
140 Ga0373941_0001873 3300035115 Bacteria 4548
141 Ga0373941_0009244 3300035115 Bacteria 2475
142 Ga0373960_0001192 3300035121 Bacteria 5682
143 Ga0373955_0177721 3300035172 Unclassified 1262
144 Ga0373942_0001940 3300035207 Bacteria 5177
145 Ga0373961_0002551 3300035241 Bacteria 4692
146 Ga0373962_0002122 3300035242 Bacteria 4732
147 Ga0373931_0010361 3300035691 Bacteria 4479
148 Ga0373925_0131572 3300037068 Bacteria 1951
149 Ga0395905_0390656 3300037471 Bacteria 1286
150 Ga0436360_0133798 3300039438 Bacteria 1341
151 Ga0436361_0398964 3300039447 Bacteria 3099
152 Ga0436361_0455558 3300039447 Bacteria 5546
153 Ga0436361_0652222 3300039447 Bacteria 5666
154 Ga0436361_0758432 3300039447 Bacteria 3767
155 Ga0436361_1118834 3300039447 Bacteria 2172
156 Ga0436363_1657705 3300039450 Bacteria 4279
157 Ga0436362_0074292 3300039453 Bacteria 1913
158 Ga0439453_0001967 3300041408 Bacteria 2756
159 Ga0439448_0034140 3300042005 Bacteria 1624
160 Ga0466969_0058804 3300044656 Bacteria 1870
161 Ga0453683_0009870 3300044673 Bacteria 6357
162 Ga0466966_0018186 3300044684 Bacteria 4638
163 Ga0466966_0040311 3300044684 Bacteria 3006
164 Ga0466961_0031437 3300044693 Bacteria 3412
165 Ga0466961_0074549 3300044693 Bacteria 2152
166 Ga0453684_1089855 3300044712 Bacteria 844
167 Ga0466971_0008060 3300044719 Bacteria 4593
168 Ga0466970_0109497 3300044765 Bacteria 1508
169 Ga0466959_0023515 3300045049 Bacteria 4560
170 Ga0495585_0043209 3300046492 Bacteria 2521
171 Ga0495610_0101268 3300046512 Bacteria 1290
172 Ga0495616_0099786 3300046513 Unclassified 1363
173 Ga0495632_0011854 3300046519 Bacteria 5068
174 Ga0495632_0072253 3300046519 Bacteria 1656
175 Ga0495648_0018668 3300046524 Bacteria 4898
176 Ga0495666_0052573 3300046526 Bacteria 1955
177 Ga0495611_0038201 3300046648 Bacteria 2135
178 Ga0495676_0212805 3300047321 Bacteria 1336
179 Ga0496125_0022716 3300048928 Bacteria 5815
180 Ga0496126_0135005 3300048929 Bacteria 2129
181 Ga0501033_0187693 3300049570 Bacteria 1480
182 Ga0501034_0099572 3300049571 Bacteria 2901
183 Ga0501040_0107154 3300049576 Bacteria 1953
184 Ga0501041_0114288 3300049577 Unclassified 1676
185 Ga0501042_0237794 3300049578 Unclassified 1314
186 Ga0501046_0225505 3300049580 Bacteria 1386
187 Ga0501047_0035552 3300049581 Bacteria 4813
188 Ga0501047_0040637 3300049581 Bacteria 4497
189 Ga0501048_0183000 3300049582 Unclassified 1485
190 Ga0501070_0027163 3300049586 Bacteria 4801
191 Ga0501070_0032907 3300049586 Bacteria 4337
192 Ga0501073_0038167 3300049589 Bacteria 3409
193 Ga0501074_0041944 3300049590 Bacteria 3312
194 Ga0501077_0014117 3300049593 Bacteria 5012
195 Ga0501079_0344659 3300049741 Bacteria 1167
196 Ga0501081_0073066 3300049743 Bacteria 2392
197 Ga0501083_0025054 3300049744 Bacteria 4132
198 Ga0501044_0045955 3300049823 Bacteria 4522
199 Ga0501045_0318156 3300049824 Unclassified 1158
200 nmdc:mga08y16_138158_c1 3300050511 Bacteria 2534
201 nmdc:mga08y16_36319_c1 3300050511 Bacteria 5175
202 nmdc:mga0n895_143523_c1 3300050512 Bacteria 2417
203 nmdc:mga0rr50_15411_c1 3300050513 Bacteria 5046
204 nmdc:mga08x19_9945_c1 3300050514 Bacteria 5701
205 nmdc:mga0a205_22424_c1 3300050515 Bacteria 5981
206 Ga0500646_0001275 3300053090 Bacteria 6744
207 Ga0500583_0029959 3300053092 Bacteria 2379
208 Ga0500651_0035709 3300053093 Bacteria 3131
209 Ga0500556_0012315 3300053104 Bacteria 2552
210 Ga0500556_0044458 3300053104 Unclassified 1580
211 Ga0500597_000944 3300053120 Bacteria 6810
212 Ga0500597_001992 3300053120 Bacteria 5493
213 Ga0500642_0002661 3300053130 Bacteria 5278
214 Ga0500559_0059833 3300053136 Bacteria 1696
215 Ga0500579_009120 3300053143 Bacteria 6278
216 Ga0500622_0006805 3300053156 Bacteria 6575
217 Ga0500624_009764 3300053157 Bacteria 1371
218 Ga0500633_0032277 3300053160 Bacteria 1699
219 Ga0500636_0006150 3300053177 Bacteria 6892
220 Ga0500637_0054587 3300053178 Bacteria 2281
221 Ga0466962_0008478 3300061719 Bacteria 4925
222 Ga0530510_0099881 3300061734 Bacteria 2122
223 Ga0530510_0132244 3300061734 Unclassified 1836
224 Ga0070666_10018807
225 LJNas_1001664
226 rootH2_10190393
227 rootH1_10042904
228 rootH1_10252062
229 Ga0070683_100070508
230 Ga0070680_100247195
231 Ga0070692_10053631
232 Ga0070669_100341165
233 Ga0070671_100352550
234 Ga0070705_100007995
235 Ga0070700_100013628
236 Ga0070694_100027960
237 Ga0070708_100019004
238 Ga0070708_100052280
239 Ga0070681_10079586
240 Ga0068867_100020989
241 Ga0070685_10206574
242 Ga0070706_100022969
243 Ga0070706_100024345
244 Ga0070707_100027912
245 Ga0070707_100511995
246 Ga0070698_100029711
247 Ga0070699_100151395
248 Ga0070697_100011770
249 Ga0068853_100056574
250 Ga0070672_100284139
251 Ga0070695_100137146
252 Ga0070696_100216326
253 Ga0068857_100151598
254 Ga0068857_100227815
255 Ga0068856_100451752
256 Ga0068859_100039913
257 Ga0068859_100187312
258 Ga0068864_100129195
259 Ga0068861_100024135
260 Ga0068870_10054431
261 Ga0068863_100025337
262 Ga0068863_100266415
263 Ga0068858_100023082
264 Ga0068858_100076432
265 Ga0068860_100002357
266 Ga0068860_100025462
267 Ga0068860_100027636
268 Ga0068860_100171021
269 Ga0068862_100026672
270 Ga0081455_10036680
271 Ga0075428_100328412
272 Ga0075433_10020910
273 Ga0075434_100032612
274 Ga0068865_100077225
275 Ga0097620_100039916
276 Ga0097620_100187328
277 Ga0075435_100020738
278 Ga0099795_10001463
279 Ga0111539_10026034
280 Ga0111539_10058037
281 Ga0105247_10042553
282 Ga0105243_10020414
283 Ga0105248_10022912
284 Ga0163163_10026009
285 Ga0182008_10008842
286 Ga0157379_10029707
287 Ga0157376_10086669
288 Ga0182007_10006961
289 Ga0213873_10019558
290 Ga0213872_10009422
291 Ga0213872_10023417
292 Ga0213872_10064044
293 Ga0213872_10066003
294 Ga0213874_10004569
295 Ga0213874_10067822
296 Ga0213876_10093541
297 Ga0213871_10006921
298 Ga0224572_1004127
299 Ga0207680_10005176
300 Ga0207707_10061074
301 Ga0207660_10260043
302 Ga0207646_10123202
303 Ga0207709_10013527
304 Ga0207691_10132814
305 Ga0207711_10015852
306 Ga0207712_10261878
307 Ga0207703_10023520
308 Ga0207703_10028763
309 Ga0207639_10441211
310 Ga0207708_10028382
311 Ga0207641_10021384
312 Ga0207641_10103631
313 Ga0207641_10291510
314 Ga0207648_10037402
315 Ga0207676_10208404
316 Ga0207674_10177651
317 Ga0207675_100039550
318 Ga0207683_10027943
319 Ga0207428_10025236
320 Ga0207428_10087846
321 Ga0268265_10101833
322 Ga0268264_10001757
323 Ga0268264_10015831
324 Ga0268264_10071753
325 Ga0265337_1010785
326 Ga0265334_10004605
327 Ga0265318_10066891
328 Ga0307517_10097810
329 Ga0307511_10000953
330 Ga0307511_10013271
331 Ga0265762_1004258
332 Ga0265329_10031466
333 Ga0265340_10110395
334 Ga0265331_10005917
335 Ga0265331_10007017
336 Ga0265331_10121633
337 Ga0265316_10005183
338 Ga0265316_10025499
339 Ga0307509_10000576
340 Ga0307509_10032590
341 Ga0307509_10038485
342 Ga0307509_10052727
343 Ga0307509_10087115
344 Ga0307514_10115805
345 Ga0265314_10002921
346 Ga0373948_0003811
347 Ga0373950_0002073
348 Ga0373950_0018082
349 Ga0373958_0000584
350 Ga0373958_0000624
351 Ga0373959_0026536
352 Ga0373938_0000924
353 Ga0373929_0003238
354 Ga0373940_0004550
355 Ga0373949_0002671
356 Ga0373949_0007975
357 Ga0373951_0003448
358 Ga0373951_0021987
359 Ga0373952_0004224
360 Ga0373932_0002711
361 Ga0373932_0004182
362 Ga0373939_0002353
363 Ga0373941_0001873
364 Ga0373941_0009244
365 Ga0373960_0001192
366 Ga0373955_0177721
367 Ga0373942_0001940
368 Ga0373961_0002551
369 Ga0373962_0002122
370 Ga0373931_0010361
371 Ga0373925_0131572
372 Ga0395905_0390656
373 Ga0436360_0133798
374 Ga0436361_0398964
375 Ga0436361_0455558
376 Ga0436361_0652222
377 Ga0436361_0758432
378 Ga0436361_1118834
379 Ga0436363_1657705
380 Ga0436362_0074292
381 Ga0439453_0001967
382 Ga0439448_0034140
383 Ga0466969_0058804
384 Ga0453683_0009870
385 Ga0466966_0018186
386 Ga0466966_0040311
387 Ga0466961_0031437
388 Ga0466961_0074549
389 Ga0453684_1089855
390 Ga0466971_0008060
391 Ga0466970_0109497
392 Ga0466959_0023515
393 Ga0495585_0043209
394 Ga0495610_0101268
395 Ga0495616_0099786
396 Ga0495632_0011854
397 Ga0495632_0072253
398 Ga0495648_0018668
399 Ga0495666_0052573
400 Ga0495611_0038201
401 Ga0495676_0212805
402 Ga0496125_0022716
403 Ga0496126_0135005
404 Ga0501033_0187693
405 Ga0501034_0099572
406 Ga0501040_0107154
407 Ga0501041_0114288
408 Ga0501042_0237794
409 Ga0501046_0225505
410 Ga0501047_0035552
411 Ga0501047_0040637
412 Ga0501048_0183000
413 Ga0501070_0027163
414 Ga0501070_0032907
415 Ga0501073_0038167
416 Ga0501074_0041944
417 Ga0501077_0014117
418 Ga0501079_0344659
419 Ga0501081_0073066
420 Ga0501083_0025054
421 Ga0501044_0045955
422 Ga0501045_0318156
423 nmdc:mga08y16_138158_c1
424 nmdc:mga08y16_36319_c1
425 nmdc:mga0n895_143523_c1
426 nmdc:mga0rr50_15411_c1
427 nmdc:mga08x19_9945_c1
428 nmdc:mga0a205_22424_c1
429 Ga0500646_0001275
430 Ga0500583_0029959
431 Ga0500651_0035709
432 Ga0500556_0012315
433 Ga0500556_0044458
434 Ga0500597_000944
435 Ga0500597_001992
436 Ga0500642_0002661
437 Ga0500559_0059833
438 Ga0500579_009120
439 Ga0500622_0006805
440 Ga0500624_009764
441 Ga0500633_0032277
442 Ga0500636_0006150
443 Ga0500637_0054587
444 Ga0466962_0008478
445 Ga0530510_0099881
446 Ga0530510_0132244

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13481

AAA_25

AAA domain

3

190

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aiq-assembly1.cif.gz_D crystal structure of ligand-free nadr 0.9469 257 313
3kfw-assembly1.cif.gz_X uncharacterized protein rv0674 from mycobacterium tuberculosis 0.9205 266 313
1j75-assembly1.cif.gz_A-2 crystal structure of the dna-binding domain zalpha of dlm-1 bound to z-dna 0.9066 257 311
1lnw-assembly3.cif.gz_F crystal structure of the mexr repressor of the mexab-oprm multidrug efflux operon of pseudomonas aeruginosa 0.9059 257 313
5aip-assembly1.cif.gz_B crystal structure of nadr in complex with 4-hydroxyphenylacetate 0.9058 257 313
ID Description Score Start End Superfamily
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9215 258 312 1.10.10.10
af_P0ACN4_17_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9205 258 312 1.10.10.10
af_Q2G033_15_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9173 262 313 1.10.10.10
2xrnA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9115 259 312 1.10.10.10
5aiqA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9064 259 313 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2V9BBE0-F1-model_v4 Uncharacterized protein 0.8855 1 144
AF-A0A518EZ06-F1-model_v4 AAA family ATPase 0.8849 2 249
AF-X0UCA7-F1-model_v4 SF4 helicase domain-containing protein 0.88 4 184
AF-A0A7V8NVY0-F1-model_v4 AAA family ATPase 0.879 1 130
AF-A0A7C5J2W2-F1-model_v4 AAA family ATPase 0.8759 1 255

Map