F334621

General Info

Members Datasets Scaffolds Average Seq Length
222 84 444 375

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10015890|Ga0316575_100158902
Length 411
Sequence MLSDIAGGLQGLTDGIAVLFTAGGLKNIIMLMIGGTLIYLGVKKDVEPLLLVPIGFGCLLVNIPLSELMHQGIEPGAKQVFETMGGAAPDAAKAMLKDETGFLRTIYNAGIANELFPLLIFIGIGAMTDFGPLLENPKILLFGAAGQSGIFLTLLLALGLGFSKLHAVAIAVIGACDGPTAIYVAAQYAPELLGPISVAAYSYMALVPIIQPPIMKALTTEKERRTVMPAVKRTVSPNAKLLFPIVVTVVTGLIAPKGLPLMGAIMLGNFMRESAVVGRLVKASENEIANIATLFLGIAIGATMQAETFLRPSTLAIFALGFVAICLDTVVGVLFGRVWFHLSGGKINPLIGAAGISAYPMAARVVQTQGQRYNKQNYLLMHAMGANTGGQIGSVAAAAVMLSVLKGMGLI

Samples

Sample ID Description Type Environment
1 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
11 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
12 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
16 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
21 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
22 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
23 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
24 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
25 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
26 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
27 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
28 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
29 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
31 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
32 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
33 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
34 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
35 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
36 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
37 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
38 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
39 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
40 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
41 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
42 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
43 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
44 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
46 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
47 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
55 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
56 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
57 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
58 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
59 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
60 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
61 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
62 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
63 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
64 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
65 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
66 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
67 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
68 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
73 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
74 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
75 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
76 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
77 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
78 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
80 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
81 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
82 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
83 2881633906 Lactiplantibacillus garii FI11369 Isolate Unclassified
84 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.75
Metatranscriptomes 0.45
Isolates 1.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.45
Rhizosphere 98.2
Stem 0
Stem Tuber 0
Unclassified 2.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316575_10015890 3300031665 Bacteria 2841
2 Ga0065707_10082204 3300005295 Bacteria 19230
3 Ga0070669_100270334 3300005353 Bacteria 1359
4 Ga0070694_100041328 3300005444 Bacteria 3076
5 Ga0070698_100012106 3300005471 Bacteria 9144
6 Ga0070698_100239851 3300005471 Bacteria 1746
7 Ga0068862_100148822 3300005844 Bacteria 2083
8 Ga0081455_10000286 3300005937 Bacteria 66868
9 Ga0081455_10039876 3300005937 Bacteria 4145
10 Ga0081538_10003935 3300005981 Bacteria 13849
11 Ga0081538_10064180 3300005981 Bacteria 2079
12 Ga0075428_100006615 3300006844 Bacteria 12894
13 Ga0075428_100072034 3300006844 Bacteria 3777
14 Ga0075428_100116473 3300006844 Bacteria 2910
15 Ga0075431_100004497 3300006847 Bacteria 13681
16 Ga0075431_100093642 3300006847 Bacteria 3100
17 Ga0075431_100123329 3300006847 Bacteria 2673
18 Ga0075433_10008166 3300006852 Bacteria 8335
19 Ga0075434_100012869 3300006871 Bacteria 7946
20 Ga0075434_100084346 3300006871 Bacteria 3176
21 Ga0075429_100000271 3300006880 Bacteria 36263
22 Ga0075429_100004050 3300006880 Bacteria 12552
23 Ga0075429_100109195 3300006880 Bacteria 2418
24 Ga0114129_10000002 3300009147 Bacteria 204413
25 Ga0114129_10021185 3300009147 Bacteria 9232
26 Ga0114129_10024540 3300009147 Bacteria 8542
27 Ga0114129_10025081 3300009147 Bacteria 8450
28 Ga0114129_10062701 3300009147 Bacteria 5193
29 Ga0114129_10082837 3300009147 Bacteria 4457
30 Ga0114129_10150607 3300009147 Bacteria 3184
31 Ga0114129_10584363 3300009147 Bacteria 1449
32 Ga0114129_10650749 3300009147 Bacteria 1360
33 Ga0105249_10106437 3300009553 Bacteria 2646
34 Ga0207681_10176486 3300025923 Bacteria 1624
35 Ga0207712_10307806 3300025961 Bacteria 1303
36 Ga0210002_1001760 3300027617 Bacteria 3084
37 Ga0209983_1007515 3300027665 Bacteria 2233
38 Ga0209971_1006483 3300027682 Bacteria 2768
39 Ga0209971_1019761 3300027682 Bacteria 1600
40 Ga0209974_10001715 3300027876 Bacteria 7956
41 Ga0209974_10013153 3300027876 Bacteria 2759
42 Ga0316575_10014570 3300031665 Bacteria 2954
43 Ga0316579_10014033 3300031691 Bacteria 3455
44 Ga0316579_10040990 3300031691 Bacteria 2149
45 Ga0316579_10043528 3300031691 Bacteria 2089
46 Ga0316579_10057670 3300031691 Bacteria 1824
47 Ga0316576_10078418 3300031727 Bacteria 2448
48 Ga0316578_10017260 3300031728 Bacteria 3925
49 Ga0316578_10021363 3300031728 Bacteria 3591
50 Ga0316578_10026150 3300031728 Bacteria 3289
51 Ga0316577_10019765 3300031733 Bacteria 3731
52 Ga0316577_10029020 3300031733 Bacteria 3088
53 Ga0316577_10062632 3300031733 Bacteria 2077
54 Ga0316577_10142554 3300031733 Bacteria 1350
55 Ga0307413_10135279 3300031824 Bacteria 1694
56 Ga0307416_100031497 3300032002 Bacteria 3993
57 Ga0316585_10031839 3300032137 Bacteria 1660
58 Ga0316593_10001427 3300032168 Bacteria 5265
59 Ga0316574_0001489 3300035398 Bacteria 11154
60 Ga0316574_0016815 3300035398 Bacteria 4269
61 Ga0316574_0021817 3300035398 Bacteria 3806
62 Ga0316582_0001109 3300036647 Bacteria 11393
63 Ga0316582_0004934 3300036647 Bacteria 6815
64 Ga0316582_0046161 3300036647 Bacteria 2746
65 Ga0316582_0073854 3300036647 Bacteria 2213
66 Ga0316582_0084550 3300036647 Bacteria 2077
67 Ga0316582_0150103 3300036647 Unclassified 1575
68 Ga0316584_0002392 3300036712 Bacteria 11854
69 Ga0316584_0029233 3300036712 Bacteria 4068
70 Ga0316584_0038473 3300036712 Bacteria 3559
71 Ga0316584_0057221 3300036712 Bacteria 2919
72 Ga0316584_0071314 3300036712 Bacteria 2603
73 Ga0316584_0090339 3300036712 Bacteria 2293
74 Ga0316584_0175583 3300036712 Bacteria 1587
75 Ga0316584_0213662 3300036712 Bacteria 1419
76 Ga0316581_0000276 3300037588 Bacteria 9009
77 Ga0316581_0008725 3300037588 Bacteria 2769
78 Ga0316581_0014447 3300037588 Bacteria 2248
79 Ga0451795_0445973 3300041456 Bacteria 1761
80 Ga0439460_0075025 3300042461 Bacteria 1053
81 Ga0451577_0001060 3300042876 Bacteria 39665
82 Ga0451577_0021100 3300042876 Bacteria 5966
83 Ga0451577_0062645 3300042876 Bacteria 3317
84 Ga0451577_0086903 3300042876 Bacteria 2790
85 Ga0451577_0163428 3300042876 Bacteria 2006
86 Ga0453683_0000016 3300044673 Bacteria 310845
87 Ga0453683_0004391 3300044673 Bacteria 10026
88 Ga0453683_0009676 3300044673 Bacteria 6427
89 Ga0453683_0012242 3300044673 Bacteria 5628
90 Ga0453683_0058955 3300044673 Unclassified 2401
91 Ga0453683_0129845 3300044673 Bacteria 1587
92 Ga0453684_0000001 3300044712 Bacteria 2623166
93 Ga0453684_0000055 3300044712 Bacteria 532014
94 Ga0453684_0000407 3300044712 Bacteria 176667
95 Ga0453684_0001724 3300044712 Bacteria 58581
96 Ga0453684_0002850 3300044712 Bacteria 40670
97 Ga0453684_0003347 3300044712 Bacteria 36319
98 Ga0453684_0007327 3300044712 Bacteria 20385
99 Ga0453684_0008061 3300044712 Bacteria 19047
100 Ga0453684_0008539 3300044712 Bacteria 18290
101 Ga0453684_0008984 3300044712 Bacteria 17657
102 Ga0453684_0009149 3300044712 Bacteria 17424
103 Ga0453684_0012453 3300044712 Bacteria 14020
104 Ga0453684_0024010 3300044712 Bacteria 8937
105 Ga0453684_0029467 3300044712 Bacteria 7790
106 Ga0453684_0029985 3300044712 Bacteria 7701
107 Ga0453684_0032298 3300044712 Bacteria 7331
108 Ga0453684_0035641 3300044712 Bacteria 6875
109 Ga0453684_0036991 3300044712 Bacteria 6710
110 Ga0453684_0067418 3300044712 Bacteria 4550
111 Ga0453684_0090422 3300044712 Bacteria 3782
112 Ga0453684_0102872 3300044712 Bacteria 3491
113 Ga0453684_0110583 3300044712 Bacteria 3339
114 Ga0453684_0127548 3300044712 Bacteria 3060
115 Ga0453684_0140896 3300044712 Bacteria 2880
116 Ga0453684_0174563 3300044712 Bacteria 2529
117 Ga0453684_0282772 3300044712 Bacteria 1891
118 Ga0453684_0288350 3300044712 Bacteria 1870
119 Ga0451576_0000011 3300045051 Bacteria 676436
120 Ga0451576_0000074 3300045051 Bacteria 248280
121 Ga0451576_0000377 3300045051 Bacteria 104972
122 Ga0451576_0000774 3300045051 Bacteria 62940
123 Ga0451576_0068569 3300045051 Bacteria 3691
124 Ga0451576_0070750 3300045051 Bacteria 3631
125 Ga0451576_0389225 3300045051 Bacteria 1461
126 Ga0451576_0411212 3300045051 Bacteria 1419
127 Ga0495580_0000190 3300046472 Bacteria 46579
128 Ga0501031_0016106 3300049568 Bacteria 4854
129 Ga0501031_0151322 3300049568 Bacteria 1516
130 Ga0501032_0022535 3300049569 Bacteria 4365
131 Ga0501033_0006772 3300049570 Bacteria 8951
132 Ga0501034_0073250 3300049571 Bacteria 3434
133 Ga0501036_0000124 3300049572 Bacteria 48755
134 Ga0501036_0087667 3300049572 Bacteria 2630
135 Ga0501038_0010223 3300049574 Bacteria 8585
136 Ga0501038_0025737 3300049574 Bacteria 5242
137 Ga0501039_0000168 3300049575 Bacteria 45750
138 Ga0501039_0041902 3300049575 Bacteria 3537
139 Ga0501039_0088577 3300049575 Bacteria 2411
140 Ga0501039_0116077 3300049575 Bacteria 2095
141 Ga0501040_0005928 3300049576 Bacteria 7912
142 Ga0501040_0057805 3300049576 Bacteria 2664
143 Ga0501041_0003011 3300049577 Bacteria 9659
144 Ga0501041_0009573 3300049577 Bacteria 5712
145 Ga0501041_0031681 3300049577 Bacteria 3195
146 Ga0501041_0111060 3300049577 Bacteria 1700
147 Ga0501042_0059653 3300049578 Bacteria 2724
148 Ga0501042_0099526 3300049578 Bacteria 2090
149 Ga0501042_0227735 3300049578 Bacteria 1344
150 Ga0501043_0147374 3300049579 Bacteria 1842
151 Ga0501046_0000501 3300049580 Bacteria 39127
152 Ga0501046_0031866 3300049580 Bacteria 4271
153 Ga0501046_0248871 3300049580 Bacteria 1309
154 Ga0501048_0005362 3300049582 Bacteria 9751
155 Ga0501048_0067984 3300049582 Bacteria 2517
156 Ga0501048_0105293 3300049582 Bacteria 1991
157 Ga0501068_0010962 3300049584 Bacteria 5102
158 Ga0501068_0049825 3300049584 Bacteria 2530
159 Ga0501070_0022670 3300049586 Bacteria 5258
160 Ga0501070_0048436 3300049586 Bacteria 3530
161 Ga0501071_0028166 3300049587 Bacteria 3957
162 Ga0501072_0002835 3300049588 Bacteria 13010
163 Ga0501072_0023462 3300049588 Bacteria 4792
164 Ga0501072_0160764 3300049588 Bacteria 1792
165 Ga0501074_0032469 3300049590 Bacteria 3782
166 Ga0501074_0042784 3300049590 Bacteria 3276
167 Ga0501074_0131208 3300049590 Bacteria 1792
168 Ga0501075_0000046 3300049591 Bacteria 50813
169 Ga0501075_0058662 3300049591 Bacteria 2898
170 Ga0501075_0066801 3300049591 Bacteria 2714
171 Ga0501075_0087801 3300049591 Bacteria 2357
172 Ga0501075_0161804 3300049591 Bacteria 1708
173 Ga0501076_0004704 3300049592 Bacteria 9737
174 Ga0501076_0091246 3300049592 Bacteria 2450
175 Ga0501077_0006891 3300049593 Bacteria 6996
176 Ga0501077_0010154 3300049593 Bacteria 5863
177 Ga0501202_001458 3300049652 Bacteria 3797
178 Ga0501243_000036 3300049675 Bacteria 11897
179 Ga0501079_0006512 3300049741 Bacteria 8772
180 Ga0501079_0051137 3300049741 Bacteria 3189
181 Ga0501080_0028339 3300049742 Bacteria 5209
182 Ga0501080_0057335 3300049742 Bacteria 3626
183 Ga0501081_0004833 3300049743 Bacteria 8659
184 Ga0501081_0036831 3300049743 Bacteria 3336
185 Ga0501083_0138406 3300049744 Bacteria 1594
186 Ga0501035_0115503 3300049822 Bacteria 2349
187 Ga0501035_0264407 3300049822 Bacteria 1457
188 Ga0501044_0137151 3300049823 Bacteria 2437
189 Ga0501045_0000436 3300049824 Bacteria 25558
190 Ga0501045_0029452 3300049824 Bacteria 3968
191 Ga0501045_0064792 3300049824 Bacteria 2683
192 nmdc:mga05p37_20201_c1 3300050507 Bacteria 8061
193 nmdc:mga05p37_280031_c1 3300050507 Unclassified 1989
194 nmdc:mga05p37_2_c1 3300050507 Bacteria 173421
195 nmdc:mga05p37_48319_c1 3300050507 Bacteria 5234
196 nmdc:mga05p37_7860_c1 3300050507 Bacteria 12589
197 nmdc:mga09592_205898_c1 3300050508 Bacteria 1704
198 nmdc:mga09592_2327_c1 3300050508 Bacteria 15332
199 nmdc:mga09592_61_c1 3300050508 Bacteria 60866
200 nmdc:mga09592_62295_c1 3300050508 Bacteria 3156
201 nmdc:mga06r32_1262_c1 3300050510 Bacteria 22732
202 nmdc:mga06r32_58184_c1 3300050510 Bacteria 3715
203 nmdc:mga0n895_78315_c1 3300050512 Unclassified 3290
204 nmdc:mga0rr50_67494_c1 3300050513 Unclassified 2717
205 nmdc:mga0a205_31551_c1 3300050515 Bacteria 5077
206 nmdc:mga0a205_5916_c1 3300050515 Bacteria 5702
207 Ga0501084_0013826 3300054114 Bacteria 6681
208 Ga0501084_0058628 3300054114 Bacteria 3221
209 Ga0501084_0085174 3300054114 Bacteria 2654
210 Ga0501084_0264220 3300054114 Bacteria 1453
211 Ga0590075_003011 3300059424 Bacteria 4011
212 Ga0501082_0001259 3300060353 Bacteria 22237
213 Ga0501082_0070277 3300060353 Bacteria 3014
214 Ga0501082_0162787 3300060353 Bacteria 1939
215 Ga0530510_0032880 3300061734 Bacteria 3732
216 Ga0530510_0040097 3300061734 Bacteria 3379
217 Ga0530510_0128318 3300061734 Bacteria 1865
218 Ga0530510_0185853 3300061734 Bacteria 1542
219 2526062241 2524614857 Bacteria 4146328
220 2740063586 2739367875 Bacteria 4157290
221 2881635860 2881633906 Bacteria 2972201
222 8007375510 8007371054 Bacteria 4849201
223 Ga0316575_10015890
224 Ga0065707_10082204
225 Ga0070669_100270334
226 Ga0070694_100041328
227 Ga0070698_100012106
228 Ga0070698_100239851
229 Ga0068862_100148822
230 Ga0081455_10000286
231 Ga0081455_10039876
232 Ga0081538_10003935
233 Ga0081538_10064180
234 Ga0075428_100006615
235 Ga0075428_100072034
236 Ga0075428_100116473
237 Ga0075431_100004497
238 Ga0075431_100093642
239 Ga0075431_100123329
240 Ga0075433_10008166
241 Ga0075434_100012869
242 Ga0075434_100084346
243 Ga0075429_100000271
244 Ga0075429_100004050
245 Ga0075429_100109195
246 Ga0114129_10000002
247 Ga0114129_10021185
248 Ga0114129_10024540
249 Ga0114129_10025081
250 Ga0114129_10062701
251 Ga0114129_10082837
252 Ga0114129_10150607
253 Ga0114129_10584363
254 Ga0114129_10650749
255 Ga0105249_10106437
256 Ga0207681_10176486
257 Ga0207712_10307806
258 Ga0210002_1001760
259 Ga0209983_1007515
260 Ga0209971_1006483
261 Ga0209971_1019761
262 Ga0209974_10001715
263 Ga0209974_10013153
264 Ga0316575_10014570
265 Ga0316579_10014033
266 Ga0316579_10040990
267 Ga0316579_10043528
268 Ga0316579_10057670
269 Ga0316576_10078418
270 Ga0316578_10017260
271 Ga0316578_10021363
272 Ga0316578_10026150
273 Ga0316577_10019765
274 Ga0316577_10029020
275 Ga0316577_10062632
276 Ga0316577_10142554
277 Ga0307413_10135279
278 Ga0307416_100031497
279 Ga0316585_10031839
280 Ga0316593_10001427
281 Ga0316574_0001489
282 Ga0316574_0016815
283 Ga0316574_0021817
284 Ga0316582_0001109
285 Ga0316582_0004934
286 Ga0316582_0046161
287 Ga0316582_0073854
288 Ga0316582_0084550
289 Ga0316582_0150103
290 Ga0316584_0002392
291 Ga0316584_0029233
292 Ga0316584_0038473
293 Ga0316584_0057221
294 Ga0316584_0071314
295 Ga0316584_0090339
296 Ga0316584_0175583
297 Ga0316584_0213662
298 Ga0316581_0000276
299 Ga0316581_0008725
300 Ga0316581_0014447
301 Ga0451795_0445973
302 Ga0439460_0075025
303 Ga0451577_0001060
304 Ga0451577_0021100
305 Ga0451577_0062645
306 Ga0451577_0086903
307 Ga0451577_0163428
308 Ga0453683_0000016
309 Ga0453683_0004391
310 Ga0453683_0009676
311 Ga0453683_0012242
312 Ga0453683_0058955
313 Ga0453683_0129845
314 Ga0453684_0000001
315 Ga0453684_0000055
316 Ga0453684_0000407
317 Ga0453684_0001724
318 Ga0453684_0002850
319 Ga0453684_0003347
320 Ga0453684_0007327
321 Ga0453684_0008061
322 Ga0453684_0008539
323 Ga0453684_0008984
324 Ga0453684_0009149
325 Ga0453684_0012453
326 Ga0453684_0024010
327 Ga0453684_0029467
328 Ga0453684_0029985
329 Ga0453684_0032298
330 Ga0453684_0035641
331 Ga0453684_0036991
332 Ga0453684_0067418
333 Ga0453684_0090422
334 Ga0453684_0102872
335 Ga0453684_0110583
336 Ga0453684_0127548
337 Ga0453684_0140896
338 Ga0453684_0174563
339 Ga0453684_0282772
340 Ga0453684_0288350
341 Ga0451576_0000011
342 Ga0451576_0000074
343 Ga0451576_0000377
344 Ga0451576_0000774
345 Ga0451576_0068569
346 Ga0451576_0070750
347 Ga0451576_0389225
348 Ga0451576_0411212
349 Ga0495580_0000190
350 Ga0501031_0016106
351 Ga0501031_0151322
352 Ga0501032_0022535
353 Ga0501033_0006772
354 Ga0501034_0073250
355 Ga0501036_0000124
356 Ga0501036_0087667
357 Ga0501038_0010223
358 Ga0501038_0025737
359 Ga0501039_0000168
360 Ga0501039_0041902
361 Ga0501039_0088577
362 Ga0501039_0116077
363 Ga0501040_0005928
364 Ga0501040_0057805
365 Ga0501041_0003011
366 Ga0501041_0009573
367 Ga0501041_0031681
368 Ga0501041_0111060
369 Ga0501042_0059653
370 Ga0501042_0099526
371 Ga0501042_0227735
372 Ga0501043_0147374
373 Ga0501046_0000501
374 Ga0501046_0031866
375 Ga0501046_0248871
376 Ga0501048_0005362
377 Ga0501048_0067984
378 Ga0501048_0105293
379 Ga0501068_0010962
380 Ga0501068_0049825
381 Ga0501070_0022670
382 Ga0501070_0048436
383 Ga0501071_0028166
384 Ga0501072_0002835
385 Ga0501072_0023462
386 Ga0501072_0160764
387 Ga0501074_0032469
388 Ga0501074_0042784
389 Ga0501074_0131208
390 Ga0501075_0000046
391 Ga0501075_0058662
392 Ga0501075_0066801
393 Ga0501075_0087801
394 Ga0501075_0161804
395 Ga0501076_0004704
396 Ga0501076_0091246
397 Ga0501077_0006891
398 Ga0501077_0010154
399 Ga0501202_001458
400 Ga0501243_000036
401 Ga0501079_0006512
402 Ga0501079_0051137
403 Ga0501080_0028339
404 Ga0501080_0057335
405 Ga0501081_0004833
406 Ga0501081_0036831
407 Ga0501083_0138406
408 Ga0501035_0115503
409 Ga0501035_0264407
410 Ga0501044_0137151
411 Ga0501045_0000436
412 Ga0501045_0029452
413 Ga0501045_0064792
414 nmdc:mga05p37_20201_c1
415 nmdc:mga05p37_280031_c1
416 nmdc:mga05p37_2_c1
417 nmdc:mga05p37_48319_c1
418 nmdc:mga05p37_7860_c1
419 nmdc:mga09592_205898_c1
420 nmdc:mga09592_2327_c1
421 nmdc:mga09592_61_c1
422 nmdc:mga09592_62295_c1
423 nmdc:mga06r32_1262_c1
424 nmdc:mga06r32_58184_c1
425 nmdc:mga0n895_78315_c1
426 nmdc:mga0rr50_67494_c1
427 nmdc:mga0a205_31551_c1
428 nmdc:mga0a205_5916_c1
429 Ga0501084_0013826
430 Ga0501084_0058628
431 Ga0501084_0085174
432 Ga0501084_0264220
433 Ga0590075_003011
434 Ga0501082_0001259
435 Ga0501082_0070277
436 Ga0501082_0162787
437 Ga0530510_0032880
438 Ga0530510_0040097
439 Ga0530510_0128318
440 Ga0530510_0185853
441 2526062241
442 2740063586
443 2881635860
444 8007375510

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03977

OAD_beta

Na+-transporting oxaloacetate decarboxylase beta subunit

26

405

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6iww-assembly1.cif.gz_E cryo-em structure of the s. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex 0.8741 17 365
6iww-assembly1.cif.gz_E cryo-em structure of the s. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex 0.8223 17 365
5xas-assembly1.cif.gz_B structural insights into the elevator-like mechanism of the sodium/citrate symporter cits 0.5148 2 364
5xas-assembly1.cif.gz_B structural insights into the elevator-like mechanism of the sodium/citrate symporter cits 0.5041 2 364
5xat-assembly1.cif.gz_D structural insights into the elevator-like mechanism of the sodium/citrate symporter cits 0.4801 22 364
ID Description Score Start End Superfamily
af_Q9FLW1_79_442_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.5587 26 359 1.20.1530.20
af_Q9FLW1_79_442_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.519 26 359 1.20.1530.20
af_A0A075W8S1_28_375_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.4518 22 306 1.20.1530.20
af_P36606_20_375_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.4331 71 315 3.90.180.10
af_K7MPG8_37_440_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.4194 21 363 1.20.1530.20
ID Description Score Start End GO Terms
AF-A0A3D1PR96-F1-model_v4 Glutaconyl-CoA decarboxylase subunit beta 0.9648 95 203 GO:0005886
GO:0006814
GO:0016829
AF-A0A1F7NZU5-F1-model_v4 Glutaconyl-CoA decarboxylase subunit beta 0.9539 37 363 GO:0005886
GO:0006814
GO:0016829
AF-A0A0H5BPW8-F1-model_v4 oxaloacetate decarboxylase (Na(+) extruding) (EC 7.2.4.2) 0.9521 1 368 GO:0005886
GO:0006814
GO:0016829
AF-A0A1F7NET9-F1-model_v4 Glutaconyl-CoA decarboxylase subunit beta 0.9515 11 367 GO:0005886
GO:0006814
GO:0016829
AF-A0A652ZXZ6-F1-model_v4 Glutaconyl-CoA decarboxylase subunit beta (EC 4.1.1.70) 0.9502 10 367 GO:0005886
GO:0006814
GO:0016829

Map