F334077

General Info

Members Datasets Scaffolds Average Seq Length
222 161 444 290

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10016106|Ga0070658_100161062
Length 309
Sequence MPPILELKGVSKGFGRAHERNAVLQDVNLTVNEGDFVSIIGYSGSGKSTLINLIAGLLKPDTGTARMDDSIIQGPGPERGIVFQNYSLLPWLTVIENVRLAVDQLFPAMSEQERKDYAAKYVDMVKLTPASHKYPKELSGGMRQRVSVARTLAANPRILLLDEPLSALDALTRATLQDEIAEIWQKNRTTVIWITNDPDEAILVADRVIPLLPGREGATLGQELIVDTPRPRDRKEIIKTTEFKDLKIQLVTTLLDAKKESAPTITKKLSTPDILPEDLGKKRSFNLFERPAPRRRSQLAREELKIEVP

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
90 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
104 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
105 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
106 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
107 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
108 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
111 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
119 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
120 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
158 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
159 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
160 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
161 2919683626 Flavobacterium piscis 4129 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.3
Metatranscriptomes 0.9
Isolates 1.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.11
Nodule 0
Rhizoplane 3.6
Rhizosphere 79.73
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10016106 3300005327 Bacteria 5979
2 JGI24743J22301_10000280 3300001991 Bacteria 5519
3 JGI24033J26618_1000135 3300002155 Bacteria 9763
4 rootH2_10030292 3300003320 Bacteria 6991
5 rootH1_10048176 3300003323 Bacteria 1463
6 rootH1_10074958 3300003323 Bacteria 2301
7 rootH1_10101986 3300003323 Bacteria 1574
8 Ga0058859_11799007 3300004798 Bacteria 1321
9 Ga0065704_10075362 3300005289 Bacteria 5635
10 Ga0070658_10116616 3300005327 Bacteria 2216
11 Ga0070677_10060529 3300005333 Bacteria 1560
12 Ga0070682_100012035 3300005337 Bacteria 4950
13 Ga0070689_100189322 3300005340 Bacteria 1675
14 Ga0070691_10266664 3300005341 Bacteria 924
15 Ga0070661_100001341 3300005344 Bacteria 17218
16 Ga0070661_100093544 3300005344 Bacteria 2227
17 Ga0070675_100119684 3300005354 Bacteria 2236
18 Ga0070659_100009517 3300005366 Bacteria 7139
19 Ga0070667_100099998 3300005367 Bacteria 2504
20 Ga0070700_100200659 3300005441 Bacteria 1401
21 Ga0070694_100149086 3300005444 Bacteria 1707
22 Ga0070663_100063053 3300005455 Bacteria 2675
23 Ga0070663_100190523 3300005455 Bacteria 1596
24 Ga0070678_100168707 3300005456 Bacteria 1780
25 Ga0070678_100348850 3300005456 Bacteria 1272
26 Ga0070662_100110916 3300005457 Bacteria 2090
27 Ga0070706_100078695 3300005467 Bacteria 3052
28 Ga0070698_100250193 3300005471 Bacteria 1705
29 Ga0070672_100024120 3300005543 Bacteria 4489
30 Ga0070672_100095816 3300005543 Bacteria 2400
31 Ga0070696_100468682 3300005546 Bacteria 997
32 Ga0070665_100714686 3300005548 Bacteria 1015
33 Ga0068855_100000076 3300005563 Bacteria 118910
34 Ga0068855_100051125 3300005563 Bacteria 4868
35 Ga0068855_100092527 3300005563 Bacteria 3487
36 Ga0068855_100366690 3300005563 Bacteria 1584
37 Ga0070664_100285299 3300005564 Bacteria 1489
38 Ga0070664_100516185 3300005564 Bacteria 1102
39 Ga0070664_100576929 3300005564 Bacteria 1042
40 Ga0068856_100000776 3300005614 Bacteria 34703
41 Ga0068856_100026671 3300005614 Bacteria 5634
42 Ga0068852_100419131 3300005616 Bacteria 1320
43 Ga0068852_100514207 3300005616 Bacteria 1194
44 Ga0068859_100058553 3300005617 Bacteria 3881
45 Ga0068864_100064516 3300005618 Bacteria 3176
46 Ga0068864_100202263 3300005618 Bacteria 1825
47 Ga0068864_100500256 3300005618 Bacteria 1169
48 Ga0068861_100200747 3300005719 Bacteria 1674
49 Ga0068870_10219328 3300005840 Bacteria 1163
50 Ga0068860_100049678 3300005843 Bacteria 3994
51 Ga0075368_10030030 3300006042 Bacteria 2103
52 Ga0075368_10039782 3300006042 Bacteria 1844
53 Ga0075367_10092847 3300006178 Bacteria 1838
54 Ga0075366_10009554 3300006195 Bacteria 5417
55 Ga0075366_10057427 3300006195 Bacteria 2313
56 Ga0075366_10208831 3300006195 Bacteria 1188
57 Ga0097621_100157803 3300006237 Bacteria 1948
58 Ga0097621_100220362 3300006237 Bacteria 1653
59 Ga0075370_10031637 3300006353 Bacteria 2954
60 Ga0075428_100253927 3300006844 Bacteria 1894
61 Ga0075429_100016757 3300006880 Bacteria 6345
62 Ga0075429_100037688 3300006880 Bacteria 4209
63 Ga0075429_100151312 3300006880 Bacteria 2032
64 Ga0068865_100390111 3300006881 Bacteria 1138
65 Ga0097620_100058553 3300006931 Bacteria 3881
66 Ga0105240_10496787 3300009093 Bacteria 1357
67 Ga0111539_10018377 3300009094 Bacteria 8659
68 Ga0105245_10013993 3300009098 Bacteria 6988
69 Ga0114129_10066574 3300009147 Bacteria 5025
70 Ga0105237_10410356 3300009545 Bacteria 1359
71 Ga0105238_10016862 3300009551 Bacteria 7408
72 Ga0105249_10462526 3300009553 Bacteria 1309
73 Ga0105239_10009162 3300010375 Bacteria 11195
74 Ga0105239_10388783 3300010375 Bacteria 1578
75 Ga0157373_10003031 3300013100 Bacteria 12665
76 Ga0157370_10000815 3300013104 Bacteria 39443
77 Ga0157370_10215687 3300013104 Bacteria 1778
78 Ga0157369_10187898 3300013105 Bacteria 2172
79 Ga0157374_10168373 3300013296 Bacteria 2137
80 Ga0157378_10038731 3300013297 Bacteria 4226
81 Ga0157378_10251288 3300013297 Bacteria 1693
82 Ga0157375_10022508 3300013308 Bacteria 5800
83 Ga0163163_10012605 3300014325 Bacteria 7709
84 Ga0163163_10041321 3300014325 Bacteria 4509
85 Ga0163163_10338057 3300014325 Bacteria 1561
86 Ga0157377_10056505 3300014745 Bacteria 2229
87 Ga0157379_10365406 3300014968 Bacteria 1323
88 Ga0157376_10210499 3300014969 Bacteria 1795
89 Ga0207705_10005201 3300025909 Bacteria 9754
90 Ga0207705_10090189 3300025909 Bacteria 2244
91 Ga0207649_10000213 3300025920 Bacteria 48038
92 Ga0207694_10015921 3300025924 Bacteria 5674
93 Ga0207650_10059955 3300025925 Bacteria 2838
94 Ga0207659_10101676 3300025926 Bacteria 2168
95 Ga0207659_10148458 3300025926 Bacteria 1828
96 Ga0207687_10063256 3300025927 Bacteria 2619
97 Ga0207687_10342863 3300025927 Bacteria 1215
98 Ga0207706_10037982 3300025933 Bacteria 4273
99 Ga0207704_10198839 3300025938 Bacteria 1465
100 Ga0207691_10001716 3300025940 Bacteria 21578
101 Ga0207691_10056766 3300025940 Bacteria 3566
102 Ga0207711_10566876 3300025941 Bacteria 1059
103 Ga0207679_10087032 3300025945 Bacteria 2405
104 Ga0207679_10612524 3300025945 Bacteria 982
105 Ga0207667_10008814 3300025949 Bacteria 11944
106 Ga0207667_10149615 3300025949 Bacteria 2403
107 Ga0207658_10080904 3300025986 Bacteria 2490
108 Ga0207678_10008881 3300026067 Bacteria 8850
109 Ga0207678_10083767 3300026067 Bacteria 2728
110 Ga0207678_10314288 3300026067 Bacteria 1347
111 Ga0207708_10084050 3300026075 Bacteria 2447
112 Ga0207702_10018238 3300026078 Bacteria 5806
113 Ga0207676_10097939 3300026095 Bacteria 2424
114 Ga0207676_10404544 3300026095 Bacteria 1276
115 Ga0207674_10000352 3300026116 Bacteria 59426
116 Ga0207674_10092449 3300026116 Bacteria 3015
117 Ga0207674_10156454 3300026116 Bacteria 2234
118 Ga0207675_100054530 3300026118 Bacteria 3729
119 Ga0207675_100169802 3300026118 Bacteria 2084
120 Ga0207683_10029720 3300026121 Bacteria 4732
121 Ga0207683_10388659 3300026121 Bacteria 1283
122 Ga0207698_10561618 3300026142 Bacteria 1120
123 Ga0209813_10009524 3300027866 Bacteria 2488
124 Ga0207428_10000171 3300027907 Bacteria 90460
125 Ga0268265_10052353 3300028380 Bacteria 3087
126 Ga0268264_10000401 3300028381 Bacteria 61879
127 Ga0268264_10045473 3300028381 Bacteria 3644
128 Ga0268264_10107558 3300028381 Bacteria 2436
129 Ga0268264_10194603 3300028381 Bacteria 1851
130 Ga0265318_10000016 3300028577 Bacteria 184782
131 Ga0307515_10061122 3300028794 Bacteria 5354
132 Ga0307515_10292254 3300028794 Bacteria 1324
133 Ga0265324_10005466 3300029957 Bacteria 5484
134 Ga0307511_10045470 3300030521 Bacteria 3627
135 Ga0265320_10023297 3300031240 Bacteria 3297
136 Ga0265331_10007218 3300031250 Bacteria 6451
137 Ga0265316_10039606 3300031344 Bacteria 3784
138 Ga0265316_10049346 3300031344 Bacteria 3316
139 Ga0307408_100044403 3300031548 Bacteria 3166
140 Ga0265313_10001978 3300031595 Bacteria 18506
141 Ga0307508_10000200 3300031616 Bacteria 71996
142 Ga0307508_10007818 3300031616 Bacteria 9929
143 Ga0307516_10036523 3300031730 Bacteria 4916
144 Ga0307410_10088737 3300031852 Bacteria 2190
145 Ga0307406_10000495 3300031901 Bacteria 22623
146 Ga0307407_10039702 3300031903 Bacteria 2619
147 Ga0307409_100027507 3300031995 Bacteria 4031
148 Ga0307414_10000057 3300032004 Bacteria 112687
149 Ga0307414_10001034 3300032004 Bacteria 14217
150 Ga0451797_0486583 3300041453 Bacteria 1218
151 Ga0451807_0603042 3300041486 Bacteria 5399
152 Ga0451807_2177473 3300041486 Bacteria 1625
153 Ga0451835_0202919 3300041492 Bacteria 1847
154 Ga0451849_0111346 3300041505 Bacteria 2223
155 Ga0451851_0339194 3300041507 Bacteria 1148
156 Ga0451855_1639610 3300041511 Bacteria 1877
157 Ga0451853_2856535 3300041512 Bacteria 5692
158 Ga0450920_016693 3300042122 Bacteria 1400
159 Ga0450890_006161 3300042127 Bacteria 1538
160 Ga0451577_0002366 3300042876 Bacteria 22657
161 Ga0451577_0475003 3300042876 Unclassified 1135
162 Ga0466972_0001191 3300044658 Bacteria 12500
163 Ga0466965_0000150 3300044683 Bacteria 20617
164 Ga0466965_0210607 3300044683 Bacteria 1033
165 Ga0466963_0172520 3300044694 Bacteria 1508
166 Ga0466964_0011040 3300044706 Bacteria 3413
167 Ga0453684_0000838 3300044712 Bacteria 103849
168 Ga0453684_0461990 3300044712 Bacteria 1411
169 Ga0466971_0000263 3300044719 Bacteria 20113
170 Ga0466968_0003058 3300044735 Bacteria 6187
171 Ga0466960_0000825 3300044901 Bacteria 10913
172 Ga0466960_0139902 3300044901 Bacteria 1285
173 Ga0451576_0013240 3300045051 Bacteria 9233
174 Ga0451576_0525900 3300045051 Bacteria 1243
175 Ga0466967_0192262 3300045976 Bacteria 1929
176 Ga0495628_0150547 3300046516 Bacteria 1773
177 Ga0496101_0100005 3300048904 Bacteria 2169
178 Ga0496107_0051673 3300048910 Bacteria 2965
179 Ga0496109_0076286 3300048912 Bacteria 3083
180 Ga0496114_0016612 3300048917 Bacteria 5934
181 Ga0496115_0344512 3300048918 Bacteria 1216
182 Ga0501312_000444 3300049528 Bacteria 3307
183 Ga0501031_0013881 3300049568 Bacteria 5248
184 Ga0501032_0012214 3300049569 Bacteria 6148
185 Ga0501033_0000056 3300049570 Bacteria 107931
186 Ga0501033_0016713 3300049570 Bacteria 5550
187 Ga0501034_0009883 3300049571 Bacteria 9973
188 Ga0501034_0016934 3300049571 Bacteria 7473
189 Ga0501038_0005167 3300049574 Bacteria 12140
190 Ga0501043_0141792 3300049579 Bacteria 1882
191 Ga0501047_0105816 3300049581 Bacteria 2694
192 Ga0501047_0371038 3300049581 Bacteria 1266
193 Ga0501073_0003752 3300049589 Bacteria 11419
194 Ga0501073_0060423 3300049589 Bacteria 2645
195 Ga0501077_0025148 3300049593 Bacteria 3782
196 Ga0501080_0094614 3300049742 Bacteria 2775
197 Ga0501083_0003339 3300049744 Bacteria 11226
198 Ga0501044_0000032 3300049823 Bacteria 169439
199 nmdc:mga0k408_42374_c1 3300050493 Bacteria 2622
200 nmdc:mga0k408_4992_c1 3300050493 Bacteria 7028
201 nmdc:mga06z11_14240_c1 3300050494 Bacteria 3518
202 nmdc:mga06z11_90640_c1 3300050494 Bacteria 1659
203 nmdc:mga04h51_42885_c1 3300050495 Bacteria 1486
204 nmdc:mga07m45_76662_c1 3300050496 Bacteria 1906
205 nmdc:mga05p37_26361_c1 3300050507 Bacteria 7069
206 nmdc:mga09592_306523_c1 3300050508 Bacteria 1376
207 nmdc:mga09592_35594_c1 3300050508 Bacteria 4169
208 nmdc:mga0qj67_49698_c1 3300050509 Bacteria 3314
209 nmdc:mga08y16_4023_c1 3300050511 Bacteria 15340
210 nmdc:mga0a205_385615_c1 3300050515 Bacteria 1266
211 Ga0495612_0025589 3300053078 Bacteria 2370
212 Ga0500643_044622 3300053087 Bacteria 1287
213 Ga0500555_000012 3300053103 Bacteria 249666
214 Ga0500616_0001536 3300053153 Bacteria 21721
215 Ga0500616_0026201 3300053153 Bacteria 3229
216 Ga0501084_0047782 3300054114 Bacteria 3584
217 Ga0590075_003669 3300059424 Bacteria 3641
218 Ga0466962_0000146 3300061719 Bacteria 29248
219 2687240559 2684623219 Bacteria 8442773
220 2688395289 2687453341 Bacteria 6534136
221 2833643411 2833640130 Bacteria 4858325
222 2919687130 2919683626 Bacteria 5534354
223 Ga0070658_10016106
224 JGI24743J22301_10000280
225 JGI24033J26618_1000135
226 rootH2_10030292
227 rootH1_10048176
228 rootH1_10074958
229 rootH1_10101986
230 Ga0058859_11799007
231 Ga0065704_10075362
232 Ga0070658_10116616
233 Ga0070677_10060529
234 Ga0070682_100012035
235 Ga0070689_100189322
236 Ga0070691_10266664
237 Ga0070661_100001341
238 Ga0070661_100093544
239 Ga0070675_100119684
240 Ga0070659_100009517
241 Ga0070667_100099998
242 Ga0070700_100200659
243 Ga0070694_100149086
244 Ga0070663_100063053
245 Ga0070663_100190523
246 Ga0070678_100168707
247 Ga0070678_100348850
248 Ga0070662_100110916
249 Ga0070706_100078695
250 Ga0070698_100250193
251 Ga0070672_100024120
252 Ga0070672_100095816
253 Ga0070696_100468682
254 Ga0070665_100714686
255 Ga0068855_100000076
256 Ga0068855_100051125
257 Ga0068855_100092527
258 Ga0068855_100366690
259 Ga0070664_100285299
260 Ga0070664_100516185
261 Ga0070664_100576929
262 Ga0068856_100000776
263 Ga0068856_100026671
264 Ga0068852_100419131
265 Ga0068852_100514207
266 Ga0068859_100058553
267 Ga0068864_100064516
268 Ga0068864_100202263
269 Ga0068864_100500256
270 Ga0068861_100200747
271 Ga0068870_10219328
272 Ga0068860_100049678
273 Ga0075368_10030030
274 Ga0075368_10039782
275 Ga0075367_10092847
276 Ga0075366_10009554
277 Ga0075366_10057427
278 Ga0075366_10208831
279 Ga0097621_100157803
280 Ga0097621_100220362
281 Ga0075370_10031637
282 Ga0075428_100253927
283 Ga0075429_100016757
284 Ga0075429_100037688
285 Ga0075429_100151312
286 Ga0068865_100390111
287 Ga0097620_100058553
288 Ga0105240_10496787
289 Ga0111539_10018377
290 Ga0105245_10013993
291 Ga0114129_10066574
292 Ga0105237_10410356
293 Ga0105238_10016862
294 Ga0105249_10462526
295 Ga0105239_10009162
296 Ga0105239_10388783
297 Ga0157373_10003031
298 Ga0157370_10000815
299 Ga0157370_10215687
300 Ga0157369_10187898
301 Ga0157374_10168373
302 Ga0157378_10038731
303 Ga0157378_10251288
304 Ga0157375_10022508
305 Ga0163163_10012605
306 Ga0163163_10041321
307 Ga0163163_10338057
308 Ga0157377_10056505
309 Ga0157379_10365406
310 Ga0157376_10210499
311 Ga0207705_10005201
312 Ga0207705_10090189
313 Ga0207649_10000213
314 Ga0207694_10015921
315 Ga0207650_10059955
316 Ga0207659_10101676
317 Ga0207659_10148458
318 Ga0207687_10063256
319 Ga0207687_10342863
320 Ga0207706_10037982
321 Ga0207704_10198839
322 Ga0207691_10001716
323 Ga0207691_10056766
324 Ga0207711_10566876
325 Ga0207679_10087032
326 Ga0207679_10612524
327 Ga0207667_10008814
328 Ga0207667_10149615
329 Ga0207658_10080904
330 Ga0207678_10008881
331 Ga0207678_10083767
332 Ga0207678_10314288
333 Ga0207708_10084050
334 Ga0207702_10018238
335 Ga0207676_10097939
336 Ga0207676_10404544
337 Ga0207674_10000352
338 Ga0207674_10092449
339 Ga0207674_10156454
340 Ga0207675_100054530
341 Ga0207675_100169802
342 Ga0207683_10029720
343 Ga0207683_10388659
344 Ga0207698_10561618
345 Ga0209813_10009524
346 Ga0207428_10000171
347 Ga0268265_10052353
348 Ga0268264_10000401
349 Ga0268264_10045473
350 Ga0268264_10107558
351 Ga0268264_10194603
352 Ga0265318_10000016
353 Ga0307515_10061122
354 Ga0307515_10292254
355 Ga0265324_10005466
356 Ga0307511_10045470
357 Ga0265320_10023297
358 Ga0265331_10007218
359 Ga0265316_10039606
360 Ga0265316_10049346
361 Ga0307408_100044403
362 Ga0265313_10001978
363 Ga0307508_10000200
364 Ga0307508_10007818
365 Ga0307516_10036523
366 Ga0307410_10088737
367 Ga0307406_10000495
368 Ga0307407_10039702
369 Ga0307409_100027507
370 Ga0307414_10000057
371 Ga0307414_10001034
372 Ga0451797_0486583
373 Ga0451807_0603042
374 Ga0451807_2177473
375 Ga0451835_0202919
376 Ga0451849_0111346
377 Ga0451851_0339194
378 Ga0451855_1639610
379 Ga0451853_2856535
380 Ga0450920_016693
381 Ga0450890_006161
382 Ga0451577_0002366
383 Ga0451577_0475003
384 Ga0466972_0001191
385 Ga0466965_0000150
386 Ga0466965_0210607
387 Ga0466963_0172520
388 Ga0466964_0011040
389 Ga0453684_0000838
390 Ga0453684_0461990
391 Ga0466971_0000263
392 Ga0466968_0003058
393 Ga0466960_0000825
394 Ga0466960_0139902
395 Ga0451576_0013240
396 Ga0451576_0525900
397 Ga0466967_0192262
398 Ga0495628_0150547
399 Ga0496101_0100005
400 Ga0496107_0051673
401 Ga0496109_0076286
402 Ga0496114_0016612
403 Ga0496115_0344512
404 Ga0501312_000444
405 Ga0501031_0013881
406 Ga0501032_0012214
407 Ga0501033_0000056
408 Ga0501033_0016713
409 Ga0501034_0009883
410 Ga0501034_0016934
411 Ga0501038_0005167
412 Ga0501043_0141792
413 Ga0501047_0105816
414 Ga0501047_0371038
415 Ga0501073_0003752
416 Ga0501073_0060423
417 Ga0501077_0025148
418 Ga0501080_0094614
419 Ga0501083_0003339
420 Ga0501044_0000032
421 nmdc:mga0k408_42374_c1
422 nmdc:mga0k408_4992_c1
423 nmdc:mga06z11_14240_c1
424 nmdc:mga06z11_90640_c1
425 nmdc:mga04h51_42885_c1
426 nmdc:mga07m45_76662_c1
427 nmdc:mga05p37_26361_c1
428 nmdc:mga09592_306523_c1
429 nmdc:mga09592_35594_c1
430 nmdc:mga0qj67_49698_c1
431 nmdc:mga08y16_4023_c1
432 nmdc:mga0a205_385615_c1
433 Ga0495612_0025589
434 Ga0500643_044622
435 Ga0500555_000012
436 Ga0500616_0001536
437 Ga0500616_0026201
438 Ga0501084_0047782
439 Ga0590075_003669
440 Ga0466962_0000146
441 2687240559
442 2688395289
443 2833643411
444 2919687130

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

24

166

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9355 4 225
4khz-assembly1.cif.gz_B crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose 0.9331 2 224
4jbw-assembly1.cif.gz_A crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.9315 4 209
7x0q-assembly1.cif.gz_A crystal structure of atpase clo1313_2554 from clostridium thermocellum 0.9277 4 224
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.918 4 225
ID Description Score Start End Superfamily
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9733 3 249 3.40.50.300
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9615 3 249 3.40.50.300
af_Q47538_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9288 4 241 3.40.50.300
af_K7LAD3_8_141_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9278 78 190 3.40.50.300
af_Q9XW49_1237_1482_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9261 2 219 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1Z8P518-F1-model_v4 ABC transporter ATP-binding protein 0.9777 4 252 GO:0005524
GO:0016887
AF-A0A1Q6DVK8-F1-model_v4 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component 0.9713 1 250 GO:0005524
GO:0016887
AF-A0A858WY56-F1-model_v4 ABC transporter ATP-binding protein 0.9699 2 260 GO:0005524
GO:0016887
AF-A0A536PA20-F1-model_v4 ABC transporter ATP-binding protein 0.9657 1 255 GO:0005524
GO:0016887
AF-A0A4Y9N8S7-F1-model_v4 deleted 0.9627 4 255

Map