F334031

General Info

Members Datasets Scaffolds Average Seq Length
222 173 183 253

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10205709|rootH2_102057092
Length 281
Sequence LFSKLYVRITIQWVDRTRRDWMAESQIEWTDATWNPVAGCSIISSGCSHCYAMGMARRLEAMGVPKYAGLTRKSGGRTLWNGQVRLDREALTIPYRWRRPRKIFVNSMSDLFHEAVPDEFILSVWEVMRLTPRHHYQILTKRPDRMASLATTLLSDVLPNVWLGTSVENAEVVERIDHLREVPAAIRFLSFEPLIGPVGHVDLSGIHWAIVGGESGHSARPIREAWIDDIYDLCIEYETAFFFKQWGTWGKDNKRRSKKANGREYRGKTWDEMPLNVSIGV

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
3 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
4 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
5 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
6 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
7 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
8 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
9 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
10 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
11 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
12 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
13 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
14 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
15 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
16 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
17 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
18 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
19 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
20 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
21 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
22 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
23 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
24 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
25 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
26 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
27 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
28 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
29 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
30 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
31 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
32 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
39 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
40 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
41 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
42 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
43 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
44 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
63 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
64 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
65 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
66 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
67 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
143 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
147 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
153 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
155 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
156 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
159 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
166 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
167 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
168 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
169 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
170 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
171 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
172 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
173 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.43
Metatranscriptomes 0
Isolates 17.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.32
Nodule 18.92
Rhizoplane 1.35
Rhizosphere 60.36
Stem 0
Stem Tuber 0
Unclassified 4.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10205709 3300003320 Unclassified 1460
2 Ga0055543_1011230 3300004625 Bacteria 1843
3 Ga0065165_1000650 3300005262 Bacteria 50148
4 Ga0065707_10141887 3300005295 Bacteria 1761
5 Ga0070670_100183602 3300005331 Bacteria 1816
6 Ga0070677_10001268 3300005333 Bacteria 8094
7 Ga0070661_100111364 3300005344 Bacteria 2044
8 Ga0070692_10005015 3300005345 Bacteria 5594
9 Ga0070668_100013798 3300005347 Bacteria 6035
10 Ga0070659_100002070 3300005366 Bacteria 14314
11 Ga0070710_10037431 3300005437 Bacteria 2659
12 Ga0070710_10046747 3300005437 Bacteria 2411
13 Ga0070711_100108336 3300005439 Bacteria 2035
14 Ga0070679_100163577 3300005530 Bacteria 2199
15 Ga0070697_100279363 3300005536 Unclassified 1432
16 Ga0070697_100297014 3300005536 Bacteria 1388
17 Ga0068863_100000058 3300005841 Bacteria 123096
18 Ga0068860_100000101 3300005843 Bacteria 142856
19 Ga0068862_100108787 3300005844 Bacteria 2431
20 Ga0075365_10000206 3300006038 Bacteria 19681
21 Ga0075365_10138308 3300006038 Bacteria 1689
22 Ga0075364_10028922 3300006051 Bacteria 3550
23 Ga0070712_100013865 3300006175 Bacteria 5160
24 Ga0075367_10000040 3300006178 Bacteria 28723
25 Ga0075366_10141989 3300006195 Bacteria 1452
26 Ga0075370_10000370 3300006353 Bacteria 16486
27 Ga0075370_10241843 3300006353 Bacteria 1069
28 Ga0075431_100470027 3300006847 Bacteria 1251
29 Ga0105240_10054367 3300009093 Bacteria 5017
30 Ga0105240_10093441 3300009093 Bacteria 3671
31 Ga0105239_11161256 3300010375 Bacteria 889
32 Ga0157371_10000268 3300013102 Bacteria 70868
33 Ga0157370_10016626 3300013104 Bacteria 7444
34 Ga0157370_10255325 3300013104 Bacteria 1621
35 Ga0157369_10000201 3300013105 Bacteria 82836
36 Ga0163162_10446218 3300013306 Bacteria 1426
37 Ga0163162_10599163 3300013306 Bacteria 1228
38 Ga0157372_10249104 3300013307 Bacteria 2062
39 Ga0214542_1016003 3300021321 Bacteria 7504
40 Ga0214545_1017515 3300021324 Bacteria 6897
41 Ga0214543_1018384 3300021327 Bacteria 6440
42 Ga0213875_10000002 3300021388 Bacteria 921066
43 Ga0228711_1000401 3300022739 Bacteria 51212
44 Ga0228711_1008201 3300022739 Bacteria 14772
45 Ga0228710_1004154 3300022740 Bacteria 22854
46 Ga0209233_1023737 3300025261 Bacteria 1548
47 Ga0209130_1003051 3300025284 Bacteria 7541
48 Ga0209758_1011316 3300025297 Bacteria 5187
49 Ga0207682_10002502 3300025893 Bacteria 8213
50 Ga0207692_10048529 3300025898 Bacteria 2137
51 Ga0207695_10078855 3300025913 Bacteria 3340
52 Ga0207693_10000915 3300025915 Bacteria 26473
53 Ga0207663_10208753 3300025916 Bacteria 1414
54 Ga0207649_10117472 3300025920 Bacteria 1788
55 Ga0207690_10003063 3300025932 Bacteria 10070
56 Ga0207665_10346620 3300025939 Bacteria 1120
57 Ga0207668_10000628 3300025972 Bacteria 21884
58 Ga0207668_10076871 3300025972 Bacteria 2405
59 Ga0207678_10111951 3300026067 Bacteria 2328
60 Ga0207641_10000338 3300026088 Bacteria 56937
61 Ga0209813_10009058 3300027866 Bacteria 2533
62 Ga0268265_10103749 3300028380 Bacteria 2303
63 Ga0268264_10000030 3300028381 Bacteria 418542
64 Ga0265338_10036160 3300028800 Bacteria 4732
65 Ga0307408_100006064 3300031548 Bacteria 8038
66 Ga0307405_10000614 3300031731 Bacteria 13718
67 Ga0307406_10044190 3300031901 Bacteria 2791
68 Ga0307412_10004073 3300031911 Bacteria 8140
69 Ga0315911_1000012 3300033442 Bacteria 248988
70 Ga0373935_0320022 3300035692 Bacteria 1100
71 Ga0373927_0081968 3300035695 Bacteria 2091
72 Ga0373947_0002524 3300035725 Bacteria 11002
73 Ga0373925_0511213 3300037068 Bacteria 986
74 Ga0395899_0058249 3300037312 Bacteria 2849
75 Ga0395900_0108651 3300037418 Bacteria 2849
76 Ga0395898_0057232 3300037466 Bacteria 3800
77 Ga0395898_0075291 3300037466 Bacteria 3260
78 Ga0395898_0162201 3300037466 Bacteria 2138
79 Ga0395905_0057584 3300037471 Bacteria 3635
80 Ga0436364_0940248 3300037853 Bacteria 592364
81 Ga0436364_1512825 3300037853 Bacteria 3769
82 Ga0395901_0018334 3300038443 Bacteria 7146
83 Ga0395901_0087346 3300038443 Bacteria 3260
84 Ga0436365_1726631 3300039437 Bacteria 1811
85 Ga0436361_1194058 3300039447 Bacteria 1178
86 Ga0495650_0000217 3300046471 Bacteria 120688
87 Ga0495650_0000834 3300046471 Bacteria 37178
88 Ga0495583_0000001 3300046506 Bacteria 811973
89 Ga0495654_0229004 3300046530 Bacteria 782
90 Ga0495665_0134933 3300046531 Bacteria 1291
91 Ga0495625_0058434 3300046660 Bacteria 2740
92 Ga0495681_0000145 3300047470 Bacteria 60000
93 Ga0496104_0000056 3300048907 Bacteria 122670
94 Ga0496105_0000036 3300048908 Bacteria 122670
95 Ga0496113_0028953 3300048916 Bacteria 3992
96 Ga0496124_0041696 3300048927 Bacteria 3958
97 Ga0496126_0230965 3300048929 Bacteria 1550
98 Ga0501031_0077900 3300049568 Bacteria 2159
99 Ga0501032_0001324 3300049569 Bacteria 19785
100 Ga0501032_0001496 3300049569 Bacteria 18663
101 Ga0501032_0024839 3300049569 Bacteria 4134
102 Ga0501033_0000175 3300049570 Bacteria 60845
103 Ga0501033_0231341 3300049570 Bacteria 1313
104 Ga0501033_0384418 3300049570 Bacteria 980
105 Ga0501034_0000804 3300049571 Bacteria 46698
106 Ga0501034_0008833 3300049571 Bacteria 10597
107 Ga0501034_0014933 3300049571 Bacteria 7988
108 Ga0501034_0040035 3300049571 Bacteria 4746
109 Ga0501036_0000367 3300049572 Bacteria 31733
110 Ga0501036_0108272 3300049572 Bacteria 2349
111 Ga0501036_0119456 3300049572 Bacteria 2226
112 Ga0501037_0006503 3300049573 Bacteria 8548
113 Ga0501038_0000157 3300049574 Bacteria 58169
114 Ga0501038_0003622 3300049574 Bacteria 14389
115 Ga0501038_0038342 3300049574 Bacteria 4197
116 Ga0501039_0003755 3300049575 Bacteria 11411
117 Ga0501039_0017121 3300049575 Bacteria 5559
118 Ga0501039_0053230 3300049575 Bacteria 3132
119 Ga0501042_0008503 3300049578 Bacteria 6780
120 Ga0501043_0000925 3300049579 Bacteria 26012
121 Ga0501043_0037942 3300049579 Bacteria 3790
122 Ga0501046_0000387 3300049580 Bacteria 44269
123 Ga0501046_0011451 3300049580 Bacteria 7579
124 Ga0501046_0034270 3300049580 Bacteria 4099
125 Ga0501047_0000399 3300049581 Bacteria 48801
126 Ga0501047_0002936 3300049581 Bacteria 16183
127 Ga0501047_0004005 3300049581 Bacteria 13848
128 Ga0501048_0000052 3300049582 Bacteria 57136
129 Ga0501048_0000722 3300049582 Bacteria 24211
130 Ga0501067_0000463 3300049583 Bacteria 22150
131 Ga0501067_0006405 3300049583 Bacteria 6522
132 Ga0501068_0000552 3300049584 Bacteria 19000
133 Ga0501069_0000318 3300049585 Bacteria 21973
134 Ga0501069_0070473 3300049585 Bacteria 1958
135 Ga0501070_0002481 3300049586 Bacteria 16173
136 Ga0501070_0020746 3300049586 Bacteria 5512
137 Ga0501071_0000441 3300049587 Bacteria 20869
138 Ga0501072_0000658 3300049588 Bacteria 24912
139 Ga0501073_0000239 3300049589 Bacteria 36296
140 Ga0501073_0004626 3300049589 Bacteria 10338
141 Ga0501073_0028415 3300049589 Bacteria 3997
142 Ga0501074_0000093 3300049590 Bacteria 42750
143 Ga0501074_0014293 3300049590 Bacteria 5774
144 Ga0501077_0104819 3300049593 Bacteria 1792
145 Ga0501079_0000862 3300049741 Bacteria 20762
146 Ga0501080_0000158 3300049742 Bacteria 48546
147 Ga0501080_0000635 3300049742 Bacteria 27889
148 Ga0501080_0399091 3300049742 Bacteria 1237
149 Ga0501083_0000350 3300049744 Bacteria 29150
150 Ga0501083_0035218 3300049744 Bacteria 3420
151 Ga0501035_0000172 3300049822 Bacteria 79203
152 Ga0501035_0016065 3300049822 Bacteria 6907
153 Ga0501044_0000731 3300049823 Bacteria 39600
154 Ga0501044_0001408 3300049823 Bacteria 28203
155 Ga0501044_0001632 3300049823 Bacteria 26302
156 Ga0501044_0557172 3300049823 Bacteria 1043
157 Ga0501045_0000540 3300049824 Bacteria 23669
158 nmdc:mga03683_12150_c2 3300050489 Bacteria 2331
159 nmdc:mga00v17_23082_c1 3300050491 Bacteria 3596
160 nmdc:mga0yw44_105_c1 3300050492 Bacteria 29307
161 nmdc:mga0k408_16759_c1 3300050493 Bacteria 2570
162 nmdc:mga06z11_146_c1 3300050494 Bacteria 28196
163 nmdc:mga04h51_12567_c1 3300050495 Bacteria 2379
164 nmdc:mga07m45_134_c1 3300050496 Bacteria 29386
165 nmdc:mga07m45_184512_c1 3300050496 Bacteria 1213
166 nmdc:mga06r32_439956_c1 3300050510 Bacteria 1284
167 Ga0495619_0060140 3300053085 Bacteria 2525
168 Ga0500643_008592 3300053087 Bacteria 3999
169 Ga0500651_0291163 3300053093 Bacteria 939
170 Ga0500566_0013516 3300053094 Bacteria 4804
171 Ga0500555_004381 3300053103 Bacteria 4013
172 Ga0500595_000688 3300053119 Bacteria 20224
173 Ga0500658_0094909 3300053134 Bacteria 1295
174 Ga0500616_0005192 3300053153 Bacteria 8927
175 Ga0500624_000041 3300053157 Bacteria 90321
176 Ga0500627_0000048 3300053158 Bacteria 58964
177 Ga0500636_0083546 3300053177 Bacteria 1837
178 Ga0500637_0000206 3300053178 Bacteria 21961
179 Ga0500637_0002864 3300053178 Bacteria 7773
180 Ga0501084_0002854 3300054114 Bacteria 13967
181 Ga0500661_001408 3300055283 Bacteria 4496
182 Ga0501082_0159081 3300060353 Bacteria 1963
183 Ga0501082_0194714 3300060353 Bacteria 1763

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10093441 Ga0105240_100934415 205
2 3300035692 Ga0373935_0320022 Ga0373935_0320022_358_978 205
3 3300035695 Ga0373927_0081968 Ga0373927_0081968_122_742 205
4 3300035725 Ga0373947_0002524 Ga0373947_0002524_62_682 205
5 3300037068 Ga0373925_0511213 Ga0373925_0511213_350_970 205
6 3300046531 Ga0495665_0134933 Ga0495665_0134933_235_855 205
7 3300005536 Ga0070697_100279363 Ga0070697_1002793632 206
8 3300010375 Ga0105239_11161256 Ga0105239_111612561 206
9 3300013307 Ga0157372_10249104 Ga0157372_102491044 206
10 3300039447 Ga0436361_1194058 Ga0436361_1194058_84_713 206
11 3300037312 Ga0395899_0058249 Ga0395899_0058249_942_1622 220
12 3300037418 Ga0395900_0108651 Ga0395900_0108651_1228_1908 220
13 3300037466 Ga0395898_0075291 Ga0395898_0075291_1639_2319 220
14 3300037471 Ga0395905_0057584 Ga0395905_0057584_2014_2694 220
15 3300038443 Ga0395901_0087346 Ga0395901_0087346_942_1622 220
16 3300013102 Ga0157371_10000268 Ga0157371_1000026859 225
17 3300050491 nmdc:mga00v17_23082_c1 nmdc:mga00v17_23082_c1_282_965 227
18 3300050492 nmdc:mga0yw44_105_c1 nmdc:mga0yw44_105_c1_9463_10146 227
19 3300050493 nmdc:mga0k408_16759_c1 nmdc:mga0k408_16759_c1_1613_2296 227
20 3300050494 nmdc:mga06z11_146_c1 nmdc:mga06z11_146_c1_9657_10340 227
21 3300050495 nmdc:mga04h51_12567_c1 nmdc:mga04h51_12567_c1_127_810 227
22 3300050496 nmdc:mga07m45_134_c1 nmdc:mga07m45_134_c1_9552_10235 227
23 3300009093 Ga0105240_10054367 Ga0105240_100543673 229
24 3300046530 Ga0495654_0229004 Ga0495654_0229004_71_760 229
25 3300050510 nmdc:mga06r32_439956_c1 nmdc:mga06r32_439956_c1_259_948 229
26 3300053093 Ga0500651_0291163 Ga0500651_0291163_11_706 229
27 3300053153 Ga0500616_0005192 Ga0500616_0005192_6212_6907 229
28 3300053177 Ga0500636_0083546 Ga0500636_0083546_84_773 229
29 3300060353 Ga0501082_0159081 Ga0501082_0159081_1180_1875 229
30 3300037853 Ga0436364_1512825 Ga0436364_1512825_1721_2443 238
31 3300039437 Ga0436365_1726631 Ga0436365_1726631_984_1706 238
32 3300021388 Ga0213875_10000002 Ga0213875_10000002384 239
33 3300037853 Ga0436364_0940248 Ga0436364_0940248_451089_451829 239
34 3300053103 Ga0500555_004381 Ga0500555_004381_3172_3948 244
35 3300046471 Ga0495650_0000217 Ga0495650_0000217_116796_117539 247
36 3300005437 Ga0070710_10046747 Ga0070710_100467471 248
37 3300025939 Ga0207665_10346620 Ga0207665_103466201 248
38 3300013104 Ga0157370_10255325 Ga0157370_102553251 249
39 3300005331 Ga0070670_100183602 Ga0070670_1001836022 250
40 3300005841 Ga0068863_100000058 Ga0068863_10000005886 250
41 3300026088 Ga0207641_10000338 Ga0207641_100003384 250
42 3300005345 Ga0070692_10005015 Ga0070692_100050153 251
43 3300005366 Ga0070659_100002070 Ga0070659_10000207014 251
44 3300005536 Ga0070697_100297014 Ga0070697_1002970142 251
45 3300006038 Ga0075365_10138308 Ga0075365_101383082 251
46 3300006353 Ga0075370_10241843 Ga0075370_102418431 251
47 3300025932 Ga0207690_10003063 Ga0207690_100030635 251
48 3300046471 Ga0495650_0000834 Ga0495650_0000834_6046_6828 251
49 3300046660 Ga0495625_0058434 Ga0495625_0058434_1709_2464 251
50 3300047470 Ga0495681_0000145 Ga0495681_0000145_6046_6828 251
51 3300050496 nmdc:mga07m45_184512_c1 nmdc:mga07m45_184512_c1_25_795 251
52 3300005530 Ga0070679_100163577 Ga0070679_1001635772 253
53 3300026067 Ga0207678_10111951 Ga0207678_101119512 253
54 iso_pu_bacteria 2582581283 2585168812 254
55 iso_pu_bacteria 2842110456 2842117268 254
56 iso_pu_bacteria 2857504554 2857508865 254
57 iso_pu_bacteria 2899845264 2899849504 254
58 iso_pu_bacteria 2933586486 2933590050 254
59 iso_pu_bacteria 2957415311 2957416759 254
60 iso_pu_bacteria 2904690495 2904693192 255
61 iso_pu_bacteria 2908756301 2908758098 255
62 iso_pu_bacteria 2921244191 2921248450 255
63 iso_pu_bacteria 2921282425 2921287623 255
64 iso_pu_bacteria 2924144063 2924145255 255
65 iso_pu_bacteria 2924200457 2924201880 255
66 iso_pu_bacteria 2957457609 2957458377 255
67 iso_pu_bacteria 2957464669 2957468761 255
68 iso_pu_bacteria 2960584000 2960586331 255
69 iso_pu_bacteria 2964621998 2964627456 255
70 iso_pu_bacteria 2964685014 2964690577 255
71 iso_pu_bacteria 2967748971 2967751316 255
72 iso_pu_bacteria 2967769361 2967772040 255
73 iso_pu_bacteria 2970156795 2970159228 255
74 iso_pu_bacteria 2977558990 2977562964 255
75 iso_pu_bacteria 8016522445 8016524660 255
76 iso_pu_bacteria 8016530956 8016538222 255
77 iso_pu_bacteria 8016539877 8016542503 255
78 iso_pu_bacteria 8016548790 8016550769 255
79 iso_pu_bacteria 8016557553 8016559185 255
80 iso_pu_bacteria 8016575299 8016580575 255
81 iso_pu_bacteria 8016595262 8016597136 255
82 iso_pu_bacteria 8018163183 8018163439 255
83 iso_pu_bacteria 8019530166 8019537897 255
84 iso_pu_bacteria 2512564014 2512642510 256
85 iso_pu_bacteria 2513237137 2513862809 256
86 iso_pu_bacteria 2842217011 2842219317 256
87 iso_pu_bacteria 2876363079 2876365358 256
88 iso_pu_bacteria 2888337043 2888339971 256
89 iso_pu_bacteria 2903521522 2903523710 256
90 iso_pu_bacteria 2903528002 2903530005 256
91 iso_pu_bacteria 2996348954 2996350695 256
92 iso_pu_bacteria 3004275668 3004277393 256
93 3300006038 Ga0075365_10000206 Ga0075365_100002067 258
94 3300006051 Ga0075364_10028922 Ga0075364_100289222 258
95 3300006178 Ga0075367_10000040 Ga0075367_100000408 258
96 3300006195 Ga0075366_10141989 Ga0075366_101419892 258
97 3300006353 Ga0075370_10000370 Ga0075370_100003705 258
98 3300025261 Ga0209233_1023737 Ga0209233_10237372 258
99 3300027866 Ga0209813_10009058 Ga0209813_100090581 258
100 3300028800 Ga0265338_10036160 Ga0265338_100361607 258
101 3300037466 Ga0395898_0057232 Ga0395898_0057232_561_1337 258
102 3300046506 Ga0495583_0000001 Ga0495583_0000001_648166_648942 258
103 3300048907 Ga0496104_0000056 Ga0496104_0000056_14623_15399 258
104 3300048908 Ga0496105_0000036 Ga0496105_0000036_120222_120998 258
105 3300048916 Ga0496113_0028953 Ga0496113_0028953_944_1720 258
106 3300048929 Ga0496126_0230965 Ga0496126_0230965_433_1209 258
107 3300049568 Ga0501031_0077900 Ga0501031_0077900_720_1496 258
108 3300049570 Ga0501033_0231341 Ga0501033_0231341_49_825 258
109 3300049571 Ga0501034_0000804 Ga0501034_0000804_27141_27917 258
110 3300049572 Ga0501036_0119456 Ga0501036_0119456_62_838 258
111 3300049580 Ga0501046_0034270 Ga0501046_0034270_1771_2547 258
112 3300049581 Ga0501047_0000399 Ga0501047_0000399_27832_28608 258
113 3300049582 Ga0501048_0000052 Ga0501048_0000052_37275_38051 258
114 3300049585 Ga0501069_0070473 Ga0501069_0070473_359_1135 258
115 3300049586 Ga0501070_0020746 Ga0501070_0020746_122_898 258
116 3300049589 Ga0501073_0004626 Ga0501073_0004626_7556_8332 258
117 3300049590 Ga0501074_0014293 Ga0501074_0014293_436_1212 258
118 3300049742 Ga0501080_0000158 Ga0501080_0000158_19068_19844 258
119 3300049744 Ga0501083_0035218 Ga0501083_0035218_2520_3296 258
120 3300049823 Ga0501044_0000731 Ga0501044_0000731_1588_2364 258
121 3300004625 Ga0055543_1011230 Ga0055543_10112301 259
122 3300005262 Ga0065165_1000650 Ga0065165_100065021 259
123 3300005333 Ga0070677_10001268 Ga0070677_100012686 259
124 3300005844 Ga0068862_100108787 Ga0068862_1001087872 259
125 3300013306 Ga0163162_10446218 Ga0163162_104462182 259
126 3300021321 Ga0214542_1016003 Ga0214542_10160034 259
127 3300021324 Ga0214545_1017515 Ga0214545_10175156 259
128 3300021327 Ga0214543_1018384 Ga0214543_10183843 259
129 3300022739 Ga0228711_1000401 Ga0228711_100040143 259
130 3300022739 Ga0228711_1008201 Ga0228711_10082016 259
131 3300022740 Ga0228710_1004154 Ga0228710_100415410 259
132 3300025297 Ga0209758_1011316 Ga0209758_10113165 259
133 3300025893 Ga0207682_10002502 Ga0207682_100025025 259
134 3300025972 Ga0207668_10076871 Ga0207668_100768712 259
135 3300028380 Ga0268265_10103749 Ga0268265_101037492 259
136 3300048927 Ga0496124_0041696 Ga0496124_0041696_438_1217 259
137 3300049569 Ga0501032_0001324 Ga0501032_0001324_17415_18194 259
138 3300049570 Ga0501033_0000175 Ga0501033_0000175_14942_15721 259
139 3300049571 Ga0501034_0008833 Ga0501034_0008833_7898_8677 259
140 3300049571 Ga0501034_0040035 Ga0501034_0040035_1594_2373 259
141 3300049572 Ga0501036_0000367 Ga0501036_0000367_14991_15770 259
142 3300049573 Ga0501037_0006503 Ga0501037_0006503_2049_2828 259
143 3300049574 Ga0501038_0000157 Ga0501038_0000157_14927_15706 259
144 3300049575 Ga0501039_0003755 Ga0501039_0003755_8584_9363 259
145 3300049578 Ga0501042_0008503 Ga0501042_0008503_5238_6017 259
146 3300049579 Ga0501043_0000925 Ga0501043_0000925_10292_11071 259
147 3300049580 Ga0501046_0000387 Ga0501046_0000387_6405_7184 259
148 3300049581 Ga0501047_0004005 Ga0501047_0004005_5198_5977 259
149 3300049582 Ga0501048_0000722 Ga0501048_0000722_15512_16291 259
150 3300049583 Ga0501067_0000463 Ga0501067_0000463_16563_17342 259
151 3300049584 Ga0501068_0000552 Ga0501068_0000552_7932_8711 259
152 3300049585 Ga0501069_0000318 Ga0501069_0000318_8166_8945 259
153 3300049586 Ga0501070_0002481 Ga0501070_0002481_14181_14960 259
154 3300049587 Ga0501071_0000441 Ga0501071_0000441_7969_8748 259
155 3300049588 Ga0501072_0000658 Ga0501072_0000658_11896_12675 259
156 3300049589 Ga0501073_0000239 Ga0501073_0000239_20183_20962 259
157 3300049590 Ga0501074_0000093 Ga0501074_0000093_18810_19589 259
158 3300049593 Ga0501077_0104819 Ga0501077_0104819_355_1134 259
159 3300049741 Ga0501079_0000862 Ga0501079_0000862_11173_11952 259
160 3300049742 Ga0501080_0000635 Ga0501080_0000635_15335_16114 259
161 3300049744 Ga0501083_0000350 Ga0501083_0000350_17924_18703 259
162 3300049822 Ga0501035_0000172 Ga0501035_0000172_63326_64105 259
163 3300049823 Ga0501044_0001408 Ga0501044_0001408_15099_15878 259
164 3300049824 Ga0501045_0000540 Ga0501045_0000540_14941_15720 259
165 3300053094 Ga0500566_0013516 Ga0500566_0013516_3917_4696 259
166 3300053119 Ga0500595_000688 Ga0500595_000688_16642_17421 259
167 3300053134 Ga0500658_0094909 Ga0500658_0094909_362_1141 259
168 3300053178 Ga0500637_0002864 Ga0500637_0002864_3077_3856 259
169 3300054114 Ga0501084_0002854 Ga0501084_0002854_2984_3763 259
170 3300055283 Ga0500661_001408 Ga0500661_001408_3520_4299 259
171 3300005295 Ga0065707_10141887 Ga0065707_101418872 260
172 3300005344 Ga0070661_100111364 Ga0070661_1001113642 260
173 3300005347 Ga0070668_100013798 Ga0070668_1000137985 260
174 3300005437 Ga0070710_10037431 Ga0070710_100374312 260
175 3300005439 Ga0070711_100108336 Ga0070711_1001083362 260
176 3300005843 Ga0068860_100000101 Ga0068860_10000010180 260
177 3300006175 Ga0070712_100013865 Ga0070712_1000138653 260
178 3300006847 Ga0075431_100470027 Ga0075431_1004700272 260
179 3300013104 Ga0157370_10016626 Ga0157370_100166265 260
180 3300013105 Ga0157369_10000201 Ga0157369_1000020113 260
181 3300013306 Ga0163162_10599163 Ga0163162_105991632 260
182 3300025898 Ga0207692_10048529 Ga0207692_100485292 260
183 3300025913 Ga0207695_10078855 Ga0207695_100788552 260
184 3300025915 Ga0207693_10000915 Ga0207693_100009152 260
185 3300025916 Ga0207663_10208753 Ga0207663_102087531 260
186 3300025920 Ga0207649_10117472 Ga0207649_101174722 260
187 3300025972 Ga0207668_10000628 Ga0207668_1000062810 260
188 3300028381 Ga0268264_10000030 Ga0268264_10000030150 260
189 3300031548 Ga0307408_100006064 Ga0307408_1000060644 260
190 3300031731 Ga0307405_10000614 Ga0307405_1000061412 260
191 3300031901 Ga0307406_10044190 Ga0307406_100441904 260
192 3300031911 Ga0307412_10004073 Ga0307412_100040735 260
193 3300033442 Ga0315911_1000012 Ga0315911_1000012223 260
194 3300049569 Ga0501032_0001496 Ga0501032_0001496_9066_9851 260
195 3300049570 Ga0501033_0384418 Ga0501033_0384418_101_886 260
196 3300049571 Ga0501034_0014933 Ga0501034_0014933_818_1603 260
197 3300049572 Ga0501036_0108272 Ga0501036_0108272_784_1569 260
198 3300049574 Ga0501038_0038342 Ga0501038_0038342_2927_3712 260
199 3300049575 Ga0501039_0053230 Ga0501039_0053230_2240_3025 260
200 3300049579 Ga0501043_0037942 Ga0501043_0037942_828_1613 260
201 3300049580 Ga0501046_0011451 Ga0501046_0011451_5951_6736 260
202 3300049581 Ga0501047_0002936 Ga0501047_0002936_2225_3010 260
203 3300049583 Ga0501067_0006405 Ga0501067_0006405_846_1631 260
204 3300049589 Ga0501073_0028415 Ga0501073_0028415_2866_3651 260
205 3300049742 Ga0501080_0399091 Ga0501080_0399091_403_1188 260
206 3300049822 Ga0501035_0016065 Ga0501035_0016065_5295_6080 260
207 3300049823 Ga0501044_0001632 Ga0501044_0001632_18511_19296 260
208 3300049823 Ga0501044_0557172 Ga0501044_0557172_213_1001 260
209 3300050489 nmdc:mga03683_12150_c2 nmdc:mga03683_12150_c2_564_1346 260
210 3300053085 Ga0495619_0060140 Ga0495619_0060140_1026_1817 260
211 3300053087 Ga0500643_008592 Ga0500643_008592_242_1024 260
212 3300053157 Ga0500624_000041 Ga0500624_000041_70100_70882 260
213 3300053158 Ga0500627_0000048 Ga0500627_0000048_33341_34123 260
214 3300053178 Ga0500637_0000206 Ga0500637_0000206_19967_20749 260
215 3300060353 Ga0501082_0194714 Ga0501082_0194714_764_1549 260
216 3300049569 Ga0501032_0024839 Ga0501032_0024839_703_1506 263
217 3300049574 Ga0501038_0003622 Ga0501038_0003622_10349_11152 263
218 3300049575 Ga0501039_0017121 Ga0501039_0017121_1641_2444 263
219 3300037466 Ga0395898_0162201 Ga0395898_0162201_1054_1878 267
220 3300038443 Ga0395901_0018334 Ga0395901_0018334_2627_3451 267
221 3300025284 Ga0209130_1003051 Ga0209130_10030514 269
222 3300003320 rootH2_10205709 rootH2_102057092 281

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07505

DUF5131

Protein of unknown function (DUF5131)

24

274

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5veh-assembly1.cif.gz_A re-refinement of the pdb structure 1yiz of aedes aegypti kynurenine aminotransferase 0.738 205 243
1yiz-assembly1.cif.gz_A aedes aegypti kynurenine aminotrasferase 0.6751 205 243
5veh-assembly1.cif.gz_B re-refinement of the pdb structure 1yiz of aedes aegypti kynurenine aminotransferase 0.6709 204 243
4fhe-assembly1.cif.gz_A spore photoproduct lyase c140a mutant 0.5981 25 246
4rh1-assembly1.cif.gz_A spore photoproduct lyase c140a/s76c mutant with bound adomet and dinucleoside spore photoproduct 0.5975 25 247
ID Description Score Start End Superfamily
af_I6YA42_4_243_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9318 25 274 3.20.20.70
af_I6YA42_4_243_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9243 25 274 3.20.20.70
2jjfA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8254 205 243 3.40.640.10
af_Q555P2_120_341_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7669 204 243 3.40.640.10
af_Q6VMN7_78_336_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7143 208 243 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A3B0T6W2-F1-model_v4 Bacteriophage protein gp37 0.9882 173 275
AF-A0A1F8ICV0-F1-model_v4 deleted 0.9837 22 278
AF-D2N078-F1-model_v4 deleted 0.9791 179 274
AF-A0A444BV42-F1-model_v4 deleted 0.978 22 266
AF-A0A536LG12-F1-model_v4 DUF5131 family protein 0.9776 159 276

Feature Viewer

pLDDT pTM Quality
85.5 0.82 High
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Predicted Structure (AlphaFold2)

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