F333834
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 221 | 133 | 212 | 575 |
Family's Representative Sequence
| Representative Sequence | 3300049581|Ga0501047_0000820|Ga0501047_0000820_991_2832 |
| Length | 613 |
| Sequence | LGAIDFHDSLAGLSLFAFGERRTAVPHLLKAAALAGVGFSLASFMPPPVFSAASLDALDPSRIAASLCGGGRTGAPLARALLIAATVAAPASEALPIPLYPDLAASPFPVSTRDPQARRYFSQGLLLSYGFNHAGAVRSFREAQRLDPDCAMCWWGEAMALGPNINAPMDERDRDAALRAMDRAMALRGAASPMEQALIEAIARRYARDPQADRAALDAAYADAMLDAARRFPADDDVAVLAAEAAMDTTPWNYWEADRKTPVGRSGDAVRLIEAVLRRNPSQAQAAHLYIHLLEASDPERAEAAADRLAAPLLPSAAHLVHMPGHIYQLRGRHADSIRVNVAAARADEAFIRSAGDHGMVRYGYYPHNIHFIVTSAQMAGDMPTAIREARRLRTVLDPETSARMAWIQAIDAAPYFAMAQFAEPAAILALPAPDPRLSYPAAMRHYARGIAYAQRRDKAGFDREIAAMARLGTSDGMKAMVDQGVPAPDLVRLAELVARGRFATASGAHDEAIDFYHQAAAIEATIPYQEPTYWYHPVRQSLGAALFLAGRHDAASDAFRAALAQTPNNGWALYGLARSEAAQGRKLEAAAARKAWSKAWLGDPRWLRMERL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2512564014 | Sphingobium sp. AP49 | Isolate | Rhizosphere |
| 2 | 2643221563 | Sphingopyxis sp. Root154 | Isolate | Unclassified |
| 3 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 4 | 2643221608 | Sphingopyxis sp. Root214 | Isolate | Unclassified |
| 5 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 6 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 7 | 2852653556 | Sphingopyxis sp. JAI108 | Isolate | Rhizosphere |
| 8 | 2885427238 | Sphingomonas mesophila SYSUP0001 | Isolate | Stem Tuber |
| 9 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 10 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 11 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 12 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 13 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 14 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 15 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 16 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 17 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 29 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 33 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 36 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 37 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 41 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 42 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 43 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 45 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 60 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 83 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 88 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 89 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 90 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 91 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 92 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 93 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 94 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 95 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 96 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 97 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 98 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 99 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 100 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 101 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 102 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 103 | 3300039145 | Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 | Metagenome | Unclassified |
| 104 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 105 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 106 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 112 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 113 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 119 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 120 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 121 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 122 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 123 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049853 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought | Metagenome | Rhizosphere |
| 126 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 127 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 128 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 129 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 130 | 3300053116 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere | Metagenome | Endosphere |
| 131 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 132 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 133 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.93 |
| Metatranscriptomes | 0 |
| Isolates | 4.07 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.74 |
| Nodule | 0.45 |
| Rhizoplane | 0.45 |
| Rhizosphere | 76.47 |
| Stem | 0 |
| Stem Tuber | 0.45 |
| Unclassified | 5.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10020496 | 3300001979 | Bacteria | 2304 |
| 2 | JGI25162J39368_1002949 | 3300002737 | Bacteria | 5737 |
| 3 | Ga0055542_1000107 | 3300003762 | Bacteria | 111897 |
| 4 | Ga0055536_1002510 | 3300003781 | Bacteria | 10296 |
| 5 | Ga0055536_1005267 | 3300003781 | Bacteria | 6370 |
| 6 | Ga0055534_1006315 | 3300003784 | Bacteria | 3003 |
| 7 | Ga0055530_10000184 | 3300003791 | Bacteria | 55977 |
| 8 | Ga0055530_10000364 | 3300003791 | Bacteria | 41009 |
| 9 | Ga0055531_10000083 | 3300003794 | Bacteria | 102626 |
| 10 | Ga0070670_100005572 | 3300005331 | Bacteria | 10620 |
| 11 | Ga0070670_100011370 | 3300005331 | Bacteria | 7609 |
| 12 | Ga0070661_100036318 | 3300005344 | Bacteria | 3582 |
| 13 | Ga0070668_100000067 | 3300005347 | Bacteria | 64968 |
| 14 | Ga0070668_100005576 | 3300005347 | Bacteria | 9338 |
| 15 | Ga0070668_100050734 | 3300005347 | Bacteria | 3195 |
| 16 | Ga0070669_100000875 | 3300005353 | Bacteria | 21956 |
| 17 | Ga0070669_100003785 | 3300005353 | Bacteria | 10931 |
| 18 | Ga0070675_100003181 | 3300005354 | Bacteria | 12426 |
| 19 | Ga0070671_100023091 | 3300005355 | Bacteria | 5084 |
| 20 | Ga0070674_100003113 | 3300005356 | Bacteria | 9236 |
| 21 | Ga0070673_100008200 | 3300005364 | Bacteria | 6933 |
| 22 | Ga0070659_100071476 | 3300005366 | Bacteria | 2759 |
| 23 | Ga0070663_100010983 | 3300005455 | Bacteria | 5665 |
| 24 | Ga0070681_10106514 | 3300005458 | Bacteria | 2745 |
| 25 | Ga0068867_100093851 | 3300005459 | Bacteria | 2281 |
| 26 | Ga0070672_100037543 | 3300005543 | Bacteria | 3696 |
| 27 | Ga0070696_100012679 | 3300005546 | Bacteria | 5659 |
| 28 | Ga0070665_100003788 | 3300005548 | Bacteria | 16007 |
| 29 | Ga0068855_100001723 | 3300005563 | Bacteria | 27344 |
| 30 | Ga0070664_100014921 | 3300005564 | Bacteria | 6339 |
| 31 | Ga0068857_100052956 | 3300005577 | Bacteria | 3600 |
| 32 | Ga0068857_100075369 | 3300005577 | Bacteria | 3008 |
| 33 | Ga0068852_100060855 | 3300005616 | Bacteria | 3279 |
| 34 | Ga0068859_100011957 | 3300005617 | Bacteria | 8718 |
| 35 | Ga0068859_100020257 | 3300005617 | Bacteria | 6677 |
| 36 | Ga0068863_100000011 | 3300005841 | Bacteria | 232287 |
| 37 | Ga0068860_100035975 | 3300005843 | Bacteria | 4747 |
| 38 | Ga0068860_100060903 | 3300005843 | Bacteria | 3586 |
| 39 | Ga0068862_100007604 | 3300005844 | Bacteria | 8976 |
| 40 | Ga0068862_100007736 | 3300005844 | Bacteria | 8889 |
| 41 | Ga0068862_100039989 | 3300005844 | Bacteria | 3984 |
| 42 | Ga0075368_10000406 | 3300006042 | Bacteria | 12615 |
| 43 | Ga0075367_10001156 | 3300006178 | Bacteria | 11018 |
| 44 | Ga0075370_10014681 | 3300006353 | Bacteria | 4183 |
| 45 | Ga0097620_100011957 | 3300006931 | Bacteria | 8718 |
| 46 | Ga0097620_100020257 | 3300006931 | Bacteria | 6677 |
| 47 | Ga0079104_1011611 | 3300006946 | Bacteria | 2820 |
| 48 | Ga0105240_10003995 | 3300009093 | Bacteria | 22722 |
| 49 | Ga0105240_10061389 | 3300009093 | Bacteria | 4684 |
| 50 | Ga0105241_10010928 | 3300009174 | Bacteria | 6659 |
| 51 | Ga0105237_10050057 | 3300009545 | Bacteria | 4199 |
| 52 | Ga0105238_10009213 | 3300009551 | Bacteria | 9881 |
| 53 | Ga0105249_10004361 | 3300009553 | Bacteria | 12234 |
| 54 | Ga0105249_10022231 | 3300009553 | Bacteria | 5680 |
| 55 | Ga0105239_10007328 | 3300010375 | Bacteria | 12665 |
| 56 | Ga0105239_10073236 | 3300010375 | Bacteria | 3766 |
| 57 | Ga0163163_10167561 | 3300014325 | Bacteria | 2243 |
| 58 | Ga0157380_10000365 | 3300014326 | Bacteria | 27217 |
| 59 | Ga0157380_10051097 | 3300014326 | Bacteria | 3267 |
| 60 | Ga0209672_101256 | 3300025228 | Bacteria | 10102 |
| 61 | Ga0207427_100548 | 3300025231 | Bacteria | 19155 |
| 62 | Ga0209437_100355 | 3300025233 | Bacteria | 52353 |
| 63 | Ga0209258_101196 | 3300025242 | Bacteria | 10348 |
| 64 | Ga0209026_1001628 | 3300025250 | Bacteria | 9553 |
| 65 | Ga0209148_1000055 | 3300025254 | Bacteria | 367500 |
| 66 | Ga0209675_1000258 | 3300025291 | Bacteria | 52281 |
| 67 | Ga0209676_1000421 | 3300025292 | Bacteria | 74706 |
| 68 | Ga0209676_1001653 | 3300025292 | Bacteria | 19495 |
| 69 | Ga0209050_1000051 | 3300025298 | Bacteria | 353153 |
| 70 | Ga0209050_1000310 | 3300025298 | Bacteria | 99292 |
| 71 | Ga0209050_1002269 | 3300025298 | Bacteria | 17026 |
| 72 | Ga0209050_1022429 | 3300025298 | Bacteria | 2262 |
| 73 | Ga0209257_1000028 | 3300025304 | Bacteria | 699493 |
| 74 | Ga0209257_1000379 | 3300025304 | Bacteria | 88845 |
| 75 | Ga0209257_1000877 | 3300025304 | Bacteria | 42562 |
| 76 | Ga0207697_10000942 | 3300025315 | Bacteria | 16403 |
| 77 | Ga0207682_10004127 | 3300025893 | Bacteria | 6155 |
| 78 | Ga0207645_10049667 | 3300025907 | Bacteria | 2679 |
| 79 | Ga0207654_10027821 | 3300025911 | Bacteria | 3077 |
| 80 | Ga0207695_10009330 | 3300025913 | Bacteria | 12142 |
| 81 | Ga0207695_10031265 | 3300025913 | Bacteria | 5842 |
| 82 | Ga0207695_10063743 | 3300025913 | Bacteria | 3798 |
| 83 | Ga0207681_10013195 | 3300025923 | Bacteria | 5109 |
| 84 | Ga0207650_10000626 | 3300025925 | Bacteria | 28173 |
| 85 | Ga0207659_10140173 | 3300025926 | Bacteria | 1876 |
| 86 | Ga0207644_10000021 | 3300025931 | Bacteria | 165175 |
| 87 | Ga0207644_10004682 | 3300025931 | Bacteria | 8892 |
| 88 | Ga0207706_10001468 | 3300025933 | Bacteria | 23557 |
| 89 | Ga0207706_10029825 | 3300025933 | Bacteria | 4868 |
| 90 | Ga0207691_10002340 | 3300025940 | Bacteria | 18564 |
| 91 | Ga0207667_10000503 | 3300025949 | Bacteria | 51606 |
| 92 | Ga0207668_10001033 | 3300025972 | Bacteria | 16616 |
| 93 | Ga0207668_10001433 | 3300025972 | Bacteria | 14048 |
| 94 | Ga0207639_10004750 | 3300026041 | Bacteria | 9150 |
| 95 | Ga0207678_10015397 | 3300026067 | Bacteria | 6726 |
| 96 | Ga0207678_10032907 | 3300026067 | Bacteria | 4518 |
| 97 | Ga0207641_10000028 | 3300026088 | Bacteria | 232451 |
| 98 | Ga0207648_10049486 | 3300026089 | Unclassified | 3677 |
| 99 | Ga0207676_10015102 | 3300026095 | Bacteria | 5568 |
| 100 | Ga0207674_10001490 | 3300026116 | Bacteria | 30232 |
| 101 | Ga0207674_10014995 | 3300026116 | Bacteria | 8537 |
| 102 | Ga0209813_10000039 | 3300027866 | Bacteria | 55148 |
| 103 | Ga0209974_10006202 | 3300027876 | Bacteria | 4185 |
| 104 | Ga0268266_10003451 | 3300028379 | Bacteria | 15764 |
| 105 | Ga0268265_10004092 | 3300028380 | Bacteria | 10251 |
| 106 | Ga0268265_10007855 | 3300028380 | Bacteria | 7197 |
| 107 | Ga0268265_10039851 | 3300028380 | Bacteria | 3465 |
| 108 | Ga0268264_10004450 | 3300028381 | Bacteria | 11956 |
| 109 | Ga0307408_100008305 | 3300031548 | Bacteria | 6854 |
| 110 | Ga0307408_100130974 | 3300031548 | Bacteria | 1956 |
| 111 | Ga0307405_10007864 | 3300031731 | Bacteria | 5368 |
| 112 | Ga0307405_10016769 | 3300031731 | Bacteria | 4001 |
| 113 | Ga0307413_10001017 | 3300031824 | Bacteria | 10146 |
| 114 | Ga0307413_10003818 | 3300031824 | Bacteria | 6428 |
| 115 | Ga0307413_10012895 | 3300031824 | Bacteria | 4178 |
| 116 | Ga0307413_10015211 | 3300031824 | Bacteria | 3936 |
| 117 | Ga0307413_10017240 | 3300031824 | Bacteria | 3756 |
| 118 | Ga0307413_10042329 | 3300031824 | Bacteria | 2675 |
| 119 | Ga0307413_10063410 | 3300031824 | Bacteria | 2291 |
| 120 | Ga0307410_10001000 | 3300031852 | Bacteria | 12226 |
| 121 | Ga0307410_10015970 | 3300031852 | Bacteria | 4464 |
| 122 | Ga0307410_10025451 | 3300031852 | Bacteria | 3714 |
| 123 | Ga0307410_10033066 | 3300031852 | Bacteria | 3336 |
| 124 | Ga0307410_10038625 | 3300031852 | Bacteria | 3128 |
| 125 | Ga0307410_10040077 | 3300031852 | Bacteria | 3080 |
| 126 | Ga0307410_10044015 | 3300031852 | Bacteria | 2962 |
| 127 | Ga0307410_10055789 | 3300031852 | Bacteria | 2683 |
| 128 | Ga0307410_10080051 | 3300031852 | Bacteria | 2291 |
| 129 | Ga0307410_10100447 | 3300031852 | Bacteria | 2072 |
| 130 | Ga0307406_10002626 | 3300031901 | Bacteria | 9791 |
| 131 | Ga0307406_10026890 | 3300031901 | Bacteria | 3460 |
| 132 | Ga0307406_10031275 | 3300031901 | Bacteria | 3239 |
| 133 | Ga0307406_10034817 | 3300031901 | Bacteria | 3092 |
| 134 | Ga0307406_10034993 | 3300031901 | Bacteria | 3085 |
| 135 | Ga0307406_10101550 | 3300031901 | Bacteria | 1960 |
| 136 | Ga0307407_10006049 | 3300031903 | Bacteria | 5332 |
| 137 | Ga0307407_10024571 | 3300031903 | Bacteria | 3162 |
| 138 | Ga0307407_10037969 | 3300031903 | Bacteria | 2665 |
| 139 | Ga0307407_10064229 | 3300031903 | Bacteria | 2156 |
| 140 | Ga0307412_10017585 | 3300031911 | Bacteria | 4281 |
| 141 | Ga0307412_10024033 | 3300031911 | Bacteria | 3758 |
| 142 | Ga0307412_10033318 | 3300031911 | Bacteria | 3273 |
| 143 | Ga0307412_10038069 | 3300031911 | Bacteria | 3094 |
| 144 | Ga0307409_100033904 | 3300031995 | Bacteria | 3721 |
| 145 | Ga0307409_100034924 | 3300031995 | Bacteria | 3679 |
| 146 | Ga0307409_100042130 | 3300031995 | Bacteria | 3416 |
| 147 | Ga0307409_100107292 | 3300031995 | Bacteria | 2333 |
| 148 | Ga0307409_100112359 | 3300031995 | Bacteria | 2287 |
| 149 | Ga0307416_100034557 | 3300032002 | Bacteria | 3848 |
| 150 | Ga0307416_100039208 | 3300032002 | Bacteria | 3664 |
| 151 | Ga0307416_100066518 | 3300032002 | Bacteria | 2967 |
| 152 | Ga0307416_100081492 | 3300032002 | Bacteria | 2736 |
| 153 | Ga0307414_10000390 | 3300032004 | Bacteria | 23921 |
| 154 | Ga0307414_10008845 | 3300032004 | Bacteria | 5745 |
| 155 | Ga0307414_10009559 | 3300032004 | Bacteria | 5579 |
| 156 | Ga0307414_10012760 | 3300032004 | Bacteria | 4983 |
| 157 | Ga0307414_10030270 | 3300032004 | Bacteria | 3534 |
| 158 | Ga0307414_10047925 | 3300032004 | Bacteria | 2944 |
| 159 | Ga0307414_10063887 | 3300032004 | Bacteria | 2618 |
| 160 | Ga0307414_10065642 | 3300032004 | Bacteria | 2590 |
| 161 | Ga0307414_10073991 | 3300032004 | Bacteria | 2467 |
| 162 | Ga0307411_10001425 | 3300032005 | Bacteria | 9752 |
| 163 | Ga0307411_10007635 | 3300032005 | Bacteria | 5533 |
| 164 | Ga0307411_10008373 | 3300032005 | Bacteria | 5351 |
| 165 | Ga0307411_10013326 | 3300032005 | Bacteria | 4532 |
| 166 | Ga0307411_10014350 | 3300032005 | Bacteria | 4405 |
| 167 | Ga0307411_10028512 | 3300032005 | Bacteria | 3395 |
| 168 | Ga0307411_10030131 | 3300032005 | Bacteria | 3322 |
| 169 | Ga0307411_10032293 | 3300032005 | Bacteria | 3232 |
| 170 | Ga0307415_100002164 | 3300032126 | Bacteria | 9742 |
| 171 | Ga0307415_100103287 | 3300032126 | Bacteria | 2096 |
| 172 | Ga0395900_0012923 | 3300037418 | Bacteria | 8529 |
| 173 | Ga0395905_0001890 | 3300037471 | Bacteria | 24157 |
| 174 | Ga0395901_0000820 | 3300038443 | Bacteria | 34424 |
| 175 | Ga0395901_0143164 | 3300038443 | Bacteria | 2513 |
| 176 | Ga0237819_00674 | 3300038705 | Bacteria | 11106 |
| 177 | Ga0237816_00106 | 3300039145 | Bacteria | 6195 |
| 178 | Ga0439445_0004373 | 3300042004 | Bacteria | 3202 |
| 179 | Ga0439432_020620 | 3300042006 | Bacteria | 2189 |
| 180 | Ga0439432_025353 | 3300042006 | Bacteria | 1946 |
| 181 | Ga0495654_0006728 | 3300046530 | Bacteria | 6502 |
| 182 | Ga0495621_0000249 | 3300046539 | Bacteria | 12865 |
| 183 | Ga0495621_0004472 | 3300046539 | Bacteria | 3935 |
| 184 | Ga0495625_0000339 | 3300046660 | Bacteria | 71474 |
| 185 | Ga0495671_0006594 | 3300046692 | Bacteria | 6695 |
| 186 | Ga0496109_0023430 | 3300048912 | Bacteria | 5481 |
| 187 | Ga0496116_0013402 | 3300048919 | Bacteria | 6612 |
| 188 | Ga0496125_0001108 | 3300048928 | Bacteria | 41389 |
| 189 | Ga0496125_0058659 | 3300048928 | Bacteria | 3108 |
| 190 | Ga0496126_0020605 | 3300048929 | Bacteria | 6458 |
| 191 | Ga0501033_0077367 | 3300049570 | Bacteria | 2441 |
| 192 | Ga0501034_0006776 | 3300049571 | Bacteria | 12251 |
| 193 | Ga0501047_0000820 | 3300049581 | Bacteria | 32247 |
| 194 | Ga0501067_0026585 | 3300049583 | Bacteria | 3205 |
| 195 | Ga0501223_000107 | 3300049663 | Bacteria | 23945 |
| 196 | Ga0501224_000031 | 3300049664 | Bacteria | 43294 |
| 197 | Ga0501233_000040 | 3300049668 | Bacteria | 17026 |
| 198 | Ga0501235_005114 | 3300049669 | Bacteria | 2850 |
| 199 | Ga0501225_0000070 | 3300049705 | Bacteria | 33694 |
| 200 | Ga0501234_000164 | 3300049707 | Bacteria | 9016 |
| 201 | Ga0501044_0043824 | 3300049823 | Bacteria | 4646 |
| 202 | Ga0501226_000051 | 3300049853 | Bacteria | 49149 |
| 203 | nmdc:mga06z11_94_c1 | 3300050494 | Bacteria | 37972 |
| 204 | nmdc:mga04h51_50_c1 | 3300050495 | Bacteria | 38012 |
| 205 | Ga0500643_000005 | 3300053087 | Bacteria | 539775 |
| 206 | Ga0500643_000026 | 3300053087 | Bacteria | 259231 |
| 207 | Ga0500643_001061 | 3300053087 | Bacteria | 16632 |
| 208 | Ga0500647_0012319 | 3300053091 | Bacteria | 3846 |
| 209 | Ga0500592_000071 | 3300053116 | Bacteria | 25639 |
| 210 | Ga0500568_0001157 | 3300053139 | Bacteria | 17661 |
| 211 | Ga0500616_0000934 | 3300053153 | Bacteria | 31967 |
| 212 | Ga0500627_0000124 | 3300053158 | Bacteria | 23762 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300031824 | Ga0307413_10063410 | Ga0307413_100634101 | 484 |
| 2 | 3300042006 | Ga0439432_020620 | Ga0439432_020620_14_1609 | 499 |
| 3 | 3300039145 | Ga0237816_00106 | Ga0237816_00106_41_1666 | 500 |
| 4 | 3300014326 | Ga0157380_10051097 | Ga0157380_100510972 | 501 |
| 5 | 3300053091 | Ga0500647_0012319 | Ga0500647_0012319_278_2125 | 505 |
| 6 | 3300003762 | Ga0055542_1000107 | Ga0055542_100010779 | 512 |
| 7 | 3300005353 | Ga0070669_100003785 | Ga0070669_1000037857 | 512 |
| 8 | 3300025231 | Ga0207427_100548 | Ga0207427_1005484 | 512 |
| 9 | 3300025233 | Ga0209437_100355 | Ga0209437_10035526 | 512 |
| 10 | 3300025242 | Ga0209258_101196 | Ga0209258_1011963 | 512 |
| 11 | 3300025254 | Ga0209148_1000055 | Ga0209148_100005527 | 512 |
| 12 | 3300042006 | Ga0439432_025353 | Ga0439432_025353_80_1714 | 512 |
| 13 | 3300005564 | Ga0070664_100014921 | Ga0070664_1000149214 | 516 |
| 14 | 3300005617 | Ga0068859_100020257 | Ga0068859_1000202575 | 516 |
| 15 | 3300005843 | Ga0068860_100035975 | Ga0068860_1000359752 | 516 |
| 16 | 3300006931 | Ga0097620_100020257 | Ga0097620_1000202575 | 516 |
| 17 | 3300025923 | Ga0207681_10013195 | Ga0207681_100131952 | 516 |
| 18 | 3300026067 | Ga0207678_10032907 | Ga0207678_100329072 | 516 |
| 19 | 3300026116 | Ga0207674_10001490 | Ga0207674_1000149016 | 516 |
| 20 | 3300028380 | Ga0268265_10007855 | Ga0268265_100078552 | 516 |
| 21 | 3300038443 | Ga0395901_0143164 | Ga0395901_0143164_684_2453 | 516 |
| 22 | 3300002737 | JGI25162J39368_1002949 | JGI25162J39368_10029493 | 517 |
| 23 | 3300009545 | Ga0105237_10050057 | Ga0105237_100500573 | 517 |
| 24 | 3300025913 | Ga0207695_10009330 | Ga0207695_100093302 | 517 |
| 25 | 3300009093 | Ga0105240_10003995 | Ga0105240_1000399530 | 518 |
| 26 | 3300032004 | Ga0307414_10063887 | Ga0307414_100638873 | 518 |
| 27 | 3300025228 | Ga0209672_101256 | Ga0209672_1012562 | 521 |
| 28 | 3300005546 | Ga0070696_100012679 | Ga0070696_1000126794 | 522 |
| 29 | 3300025907 | Ga0207645_10049667 | Ga0207645_100496672 | 522 |
| 30 | 3300048929 | Ga0496126_0020605 | Ga0496126_0020605_996_2768 | 522 |
| 31 | 3300048928 | Ga0496125_0058659 | Ga0496125_0058659_951_2723 | 525 |
| 32 | 3300006946 | Ga0079104_1011611 | Ga0079104_10116112 | 527 |
| 33 | 3300009553 | Ga0105249_10022231 | Ga0105249_100222314 | 529 |
| 34 | 3300005347 | Ga0070668_100005576 | Ga0070668_1000055767 | 530 |
| 35 | 3300005366 | Ga0070659_100071476 | Ga0070659_1000714762 | 530 |
| 36 | 3300025972 | Ga0207668_10001433 | Ga0207668_100014337 | 530 |
| 37 | 3300049583 | Ga0501067_0026585 | Ga0501067_0026585_1002_2732 | 531 |
| 38 | 3300005844 | Ga0068862_100039989 | Ga0068862_1000399893 | 532 |
| 39 | 3300031852 | Ga0307410_10015970 | Ga0307410_100159702 | 532 |
| 40 | 3300046539 | Ga0495621_0004472 | Ga0495621_0004472_2158_3912 | 532 |
| 41 | iso_pu_bacteria | 2643221598 | 2643998434 | 532 |
| 42 | 3300005331 | Ga0070670_100011370 | Ga0070670_1000113702 | 533 |
| 43 | 3300005344 | Ga0070661_100036318 | Ga0070661_1000363183 | 533 |
| 44 | 3300005347 | Ga0070668_100050734 | Ga0070668_1000507343 | 533 |
| 45 | 3300005353 | Ga0070669_100000875 | Ga0070669_10000087517 | 533 |
| 46 | 3300005354 | Ga0070675_100003181 | Ga0070675_10000318111 | 533 |
| 47 | 3300005355 | Ga0070671_100023091 | Ga0070671_1000230913 | 533 |
| 48 | 3300005356 | Ga0070674_100003113 | Ga0070674_1000031133 | 533 |
| 49 | 3300005364 | Ga0070673_100008200 | Ga0070673_1000082004 | 533 |
| 50 | 3300005455 | Ga0070663_100010983 | Ga0070663_1000109833 | 533 |
| 51 | 3300005543 | Ga0070672_100037543 | Ga0070672_1000375433 | 533 |
| 52 | 3300005577 | Ga0068857_100075369 | Ga0068857_1000753692 | 533 |
| 53 | 3300005843 | Ga0068860_100060903 | Ga0068860_1000609032 | 533 |
| 54 | 3300005844 | Ga0068862_100007736 | Ga0068862_1000077369 | 533 |
| 55 | 3300025315 | Ga0207697_10000942 | Ga0207697_100009424 | 533 |
| 56 | 3300025893 | Ga0207682_10004127 | Ga0207682_100041273 | 533 |
| 57 | 3300025926 | Ga0207659_10140173 | Ga0207659_101401731 | 533 |
| 58 | 3300025933 | Ga0207706_10001468 | Ga0207706_100014683 | 533 |
| 59 | 3300025940 | Ga0207691_10002340 | Ga0207691_100023401 | 533 |
| 60 | 3300026067 | Ga0207678_10015397 | Ga0207678_100153974 | 533 |
| 61 | 3300026089 | Ga0207648_10049486 | Ga0207648_100494862 | 533 |
| 62 | 3300028380 | Ga0268265_10004092 | Ga0268265_100040929 | 533 |
| 63 | 3300031995 | Ga0307409_100107292 | Ga0307409_1001072922 | 533 |
| 64 | 3300005617 | Ga0068859_100011957 | Ga0068859_1000119576 | 534 |
| 65 | 3300006931 | Ga0097620_100011957 | Ga0097620_1000119576 | 534 |
| 66 | 3300048919 | Ga0496116_0013402 | Ga0496116_0013402_61_1824 | 534 |
| 67 | 3300048928 | Ga0496125_0001108 | Ga0496125_0001108_6266_8029 | 534 |
| 68 | 3300031911 | Ga0307412_10024033 | Ga0307412_100240332 | 535 |
| 69 | 3300005331 | Ga0070670_100005572 | Ga0070670_1000055722 | 536 |
| 70 | 3300014325 | Ga0163163_10167561 | Ga0163163_101675611 | 536 |
| 71 | 3300025925 | Ga0207650_10000626 | Ga0207650_1000062622 | 536 |
| 72 | 3300031548 | Ga0307408_100008305 | Ga0307408_1000083052 | 536 |
| 73 | 3300031731 | Ga0307405_10016769 | Ga0307405_100167691 | 536 |
| 74 | 3300031824 | Ga0307413_10001017 | Ga0307413_100010172 | 536 |
| 75 | 3300031852 | Ga0307410_10001000 | Ga0307410_1000100011 | 536 |
| 76 | 3300031901 | Ga0307406_10002626 | Ga0307406_100026262 | 536 |
| 77 | 3300031903 | Ga0307407_10006049 | Ga0307407_100060492 | 536 |
| 78 | 3300031911 | Ga0307412_10017585 | Ga0307412_100175852 | 536 |
| 79 | 3300031995 | Ga0307409_100033904 | Ga0307409_1000339042 | 536 |
| 80 | 3300032002 | Ga0307416_100039208 | Ga0307416_1000392082 | 536 |
| 81 | 3300032004 | Ga0307414_10008845 | Ga0307414_100088454 | 536 |
| 82 | 3300032005 | Ga0307411_10030131 | Ga0307411_100301312 | 536 |
| 83 | 3300032126 | Ga0307415_100002164 | Ga0307415_1000021647 | 536 |
| 84 | 3300046539 | Ga0495621_0000249 | Ga0495621_0000249_6140_7906 | 536 |
| 85 | 3300005548 | Ga0070665_100003788 | Ga0070665_10000378810 | 537 |
| 86 | 3300028379 | Ga0268266_10003451 | Ga0268266_1000345110 | 537 |
| 87 | 3300025931 | Ga0207644_10004682 | Ga0207644_100046826 | 539 |
| 88 | 3300026095 | Ga0207676_10015102 | Ga0207676_100151023 | 539 |
| 89 | 3300032004 | Ga0307414_10073991 | Ga0307414_100739912 | 539 |
| 90 | 3300048912 | Ga0496109_0023430 | Ga0496109_0023430_303_2045 | 539 |
| 91 | 3300009551 | Ga0105238_10009213 | Ga0105238_100092136 | 540 |
| 92 | 3300010375 | Ga0105239_10007328 | Ga0105239_100073289 | 540 |
| 93 | 3300014326 | Ga0157380_10000365 | Ga0157380_100003653 | 540 |
| 94 | 3300025250 | Ga0209026_1001628 | Ga0209026_10016286 | 540 |
| 95 | 3300025913 | Ga0207695_10063743 | Ga0207695_100637433 | 540 |
| 96 | 3300005347 | Ga0070668_100000067 | Ga0070668_10000006712 | 541 |
| 97 | 3300005459 | Ga0068867_100093851 | Ga0068867_1000938512 | 541 |
| 98 | 3300005841 | Ga0068863_100000011 | Ga0068863_10000001117 | 541 |
| 99 | 3300005844 | Ga0068862_100007604 | Ga0068862_1000076042 | 541 |
| 100 | 3300009553 | Ga0105249_10004361 | Ga0105249_100043614 | 541 |
| 101 | 3300010375 | Ga0105239_10073236 | Ga0105239_100732364 | 541 |
| 102 | 3300025931 | Ga0207644_10000021 | Ga0207644_1000002118 | 541 |
| 103 | 3300025972 | Ga0207668_10001033 | Ga0207668_1000103311 | 541 |
| 104 | 3300026088 | Ga0207641_10000028 | Ga0207641_1000002817 | 541 |
| 105 | 3300028380 | Ga0268265_10039851 | Ga0268265_100398512 | 541 |
| 106 | 3300028381 | Ga0268264_10004450 | Ga0268264_1000445011 | 541 |
| 107 | 3300031852 | Ga0307410_10055789 | Ga0307410_100557891 | 541 |
| 108 | 3300031995 | Ga0307409_100042130 | Ga0307409_1000421302 | 541 |
| 109 | 3300042004 | Ga0439445_0004373 | Ga0439445_0004373_902_2638 | 544 |
| 110 | 3300031824 | Ga0307413_10015211 | Ga0307413_100152112 | 545 |
| 111 | 3300031852 | Ga0307410_10025451 | Ga0307410_100254514 | 545 |
| 112 | 3300031995 | Ga0307409_100034924 | Ga0307409_1000349241 | 545 |
| 113 | 3300032002 | Ga0307416_100034557 | Ga0307416_1000345572 | 545 |
| 114 | 3300032004 | Ga0307414_10065642 | Ga0307414_100656421 | 545 |
| 115 | 3300046692 | Ga0495671_0006594 | Ga0495671_0006594_977_2737 | 545 |
| 116 | iso_pu_bacteria | 2885427238 | 2885429253 | 546 |
| 117 | 3300031903 | Ga0307407_10037969 | Ga0307407_100379692 | 547 |
| 118 | 3300053087 | Ga0500643_001061 | Ga0500643_001061_924_2693 | 547 |
| 119 | 3300038705 | Ga0237819_00674 | Ga0237819_00674_4629_6398 | 548 |
| 120 | iso_pu_bacteria | 2941485952 | 2941488055 | 551 |
| 121 | 3300031852 | Ga0307410_10038625 | Ga0307410_100386252 | 553 |
| 122 | 3300032005 | Ga0307411_10008373 | Ga0307411_100083732 | 553 |
| 123 | iso_pu_bacteria | 2512564014 | 2512644939 | 553 |
| 124 | iso_pu_bacteria | 2643221563 | 2643833813 | 553 |
| 125 | iso_pu_bacteria | 2643221608 | 2644054739 | 553 |
| 126 | iso_pu_bacteria | 2643221663 | 2644352402 | 553 |
| 127 | iso_pu_bacteria | 2852653556 | 2852656421 | 553 |
| 128 | 3300003791 | Ga0055530_10000364 | Ga0055530_1000036432 | 555 |
| 129 | 3300003794 | Ga0055531_10000083 | Ga0055531_1000008333 | 555 |
| 130 | 3300009174 | Ga0105241_10010928 | Ga0105241_100109281 | 555 |
| 131 | 3300025298 | Ga0209050_1000051 | Ga0209050_1000051294 | 555 |
| 132 | 3300025304 | Ga0209257_1000028 | Ga0209257_100002874 | 555 |
| 133 | 3300025911 | Ga0207654_10027821 | Ga0207654_100278212 | 555 |
| 134 | 3300031852 | Ga0307410_10040077 | Ga0307410_100400771 | 555 |
| 135 | 3300031903 | Ga0307407_10024571 | Ga0307407_100245712 | 555 |
| 136 | 3300031911 | Ga0307412_10033318 | Ga0307412_100333182 | 555 |
| 137 | 3300032002 | Ga0307416_100081492 | Ga0307416_1000814922 | 555 |
| 138 | 3300053153 | Ga0500616_0000934 | Ga0500616_0000934_32_1804 | 555 |
| 139 | iso_pu_bacteria | 2643221699 | 2644548409 | 555 |
| 140 | 3300027876 | Ga0209974_10006202 | Ga0209974_100062024 | 556 |
| 141 | 3300031548 | Ga0307408_100130974 | Ga0307408_1001309742 | 556 |
| 142 | 3300031731 | Ga0307405_10007864 | Ga0307405_100078642 | 556 |
| 143 | 3300031824 | Ga0307413_10012895 | Ga0307413_100128952 | 556 |
| 144 | 3300031824 | Ga0307413_10042329 | Ga0307413_100423292 | 556 |
| 145 | 3300031852 | Ga0307410_10033066 | Ga0307410_100330662 | 556 |
| 146 | 3300031852 | Ga0307410_10080051 | Ga0307410_100800512 | 556 |
| 147 | 3300031852 | Ga0307410_10100447 | Ga0307410_101004472 | 556 |
| 148 | 3300031901 | Ga0307406_10026890 | Ga0307406_100268902 | 556 |
| 149 | 3300031901 | Ga0307406_10034817 | Ga0307406_100348172 | 556 |
| 150 | 3300031901 | Ga0307406_10034993 | Ga0307406_100349932 | 556 |
| 151 | 3300032004 | Ga0307414_10030270 | Ga0307414_100302702 | 556 |
| 152 | 3300032004 | Ga0307414_10047925 | Ga0307414_100479252 | 556 |
| 153 | 3300032005 | Ga0307411_10001425 | Ga0307411_1000142510 | 556 |
| 154 | 3300032005 | Ga0307411_10032293 | Ga0307411_100322932 | 556 |
| 155 | 3300037418 | Ga0395900_0012923 | Ga0395900_0012923_1763_3529 | 556 |
| 156 | 3300037471 | Ga0395905_0001890 | Ga0395905_0001890_1377_3143 | 556 |
| 157 | 3300038443 | Ga0395901_0000820 | Ga0395901_0000820_25462_27228 | 556 |
| 158 | 3300046660 | Ga0495625_0000339 | Ga0495625_0000339_7194_8963 | 556 |
| 159 | 3300049669 | Ga0501235_005114 | Ga0501235_005114_574_2340 | 556 |
| 160 | 3300003781 | Ga0055536_1002510 | Ga0055536_10025102 | 557 |
| 161 | 3300003781 | Ga0055536_1005267 | Ga0055536_10052676 | 557 |
| 162 | 3300003784 | Ga0055534_1006315 | Ga0055534_10063151 | 557 |
| 163 | 3300003791 | Ga0055530_10000184 | Ga0055530_1000018445 | 557 |
| 164 | 3300006042 | Ga0075368_10000406 | Ga0075368_100004066 | 557 |
| 165 | 3300006178 | Ga0075367_10001156 | Ga0075367_100011564 | 557 |
| 166 | 3300006353 | Ga0075370_10014681 | Ga0075370_100146813 | 557 |
| 167 | 3300025291 | Ga0209675_1000258 | Ga0209675_100025813 | 557 |
| 168 | 3300025292 | Ga0209676_1000421 | Ga0209676_100042134 | 557 |
| 169 | 3300025292 | Ga0209676_1001653 | Ga0209676_100165311 | 557 |
| 170 | 3300025298 | Ga0209050_1000310 | Ga0209050_100031047 | 557 |
| 171 | 3300025298 | Ga0209050_1002269 | Ga0209050_100226913 | 557 |
| 172 | 3300025298 | Ga0209050_1022429 | Ga0209050_10224292 | 557 |
| 173 | 3300025304 | Ga0209257_1000379 | Ga0209257_100037936 | 557 |
| 174 | 3300025304 | Ga0209257_1000877 | Ga0209257_100087710 | 557 |
| 175 | 3300027866 | Ga0209813_10000039 | Ga0209813_1000003919 | 557 |
| 176 | 3300031824 | Ga0307413_10003818 | Ga0307413_100038182 | 557 |
| 177 | 3300031911 | Ga0307412_10038069 | Ga0307412_100380692 | 557 |
| 178 | 3300032004 | Ga0307414_10012760 | Ga0307414_100127602 | 557 |
| 179 | 3300032005 | Ga0307411_10007635 | Ga0307411_100076351 | 557 |
| 180 | 3300032005 | Ga0307411_10014350 | Ga0307411_100143503 | 557 |
| 181 | 3300032005 | Ga0307411_10028512 | Ga0307411_100285122 | 557 |
| 182 | 3300049570 | Ga0501033_0077367 | Ga0501033_0077367_554_2323 | 557 |
| 183 | 3300049581 | Ga0501047_0000820 | Ga0501047_0000820_991_2832 | 557 |
| 184 | 3300049823 | Ga0501044_0043824 | Ga0501044_0043824_2731_4524 | 557 |
| 185 | 3300050494 | nmdc:mga06z11_94_c1 | nmdc:mga06z11_94_c1_14413_16182 | 557 |
| 186 | 3300050495 | nmdc:mga04h51_50_c1 | nmdc:mga04h51_50_c1_21856_23625 | 557 |
| 187 | 3300053087 | Ga0500643_000005 | Ga0500643_000005_273667_275442 | 557 |
| 188 | 3300053087 | Ga0500643_000026 | Ga0500643_000026_5019_6788 | 557 |
| 189 | 3300053139 | Ga0500568_0001157 | Ga0500568_0001157_7582_9351 | 557 |
| 190 | 3300005458 | Ga0070681_10106514 | Ga0070681_101065142 | 558 |
| 191 | 3300005563 | Ga0068855_100001723 | Ga0068855_1000017237 | 558 |
| 192 | 3300009093 | Ga0105240_10061389 | Ga0105240_100613893 | 558 |
| 193 | 3300025913 | Ga0207695_10031265 | Ga0207695_100312652 | 558 |
| 194 | 3300025949 | Ga0207667_10000503 | Ga0207667_1000050351 | 558 |
| 195 | 3300031824 | Ga0307413_10017240 | Ga0307413_100172402 | 558 |
| 196 | 3300031852 | Ga0307410_10044015 | Ga0307410_100440153 | 558 |
| 197 | 3300031901 | Ga0307406_10031275 | Ga0307406_100312753 | 558 |
| 198 | 3300031901 | Ga0307406_10101550 | Ga0307406_101015501 | 558 |
| 199 | 3300031903 | Ga0307407_10064229 | Ga0307407_100642292 | 558 |
| 200 | 3300031995 | Ga0307409_100112359 | Ga0307409_1001123592 | 558 |
| 201 | 3300032002 | Ga0307416_100066518 | Ga0307416_1000665182 | 558 |
| 202 | 3300032004 | Ga0307414_10009559 | Ga0307414_100095593 | 558 |
| 203 | 3300032005 | Ga0307411_10013326 | Ga0307411_100133262 | 558 |
| 204 | 3300032126 | Ga0307415_100103287 | Ga0307415_1001032872 | 558 |
| 205 | 3300032004 | Ga0307414_10000390 | Ga0307414_1000039010 | 564 |
| 206 | 3300046530 | Ga0495654_0006728 | Ga0495654_0006728_2067_3857 | 564 |
| 207 | 3300049571 | Ga0501034_0006776 | Ga0501034_0006776_10154_11959 | 564 |
| 208 | 3300049663 | Ga0501223_000107 | Ga0501223_000107_5278_7083 | 564 |
| 209 | 3300049664 | Ga0501224_000031 | Ga0501224_000031_16836_18641 | 564 |
| 210 | 3300049668 | Ga0501233_000040 | Ga0501233_000040_7045_8850 | 564 |
| 211 | 3300049705 | Ga0501225_0000070 | Ga0501225_0000070_24693_26498 | 564 |
| 212 | 3300049707 | Ga0501234_000164 | Ga0501234_000164_5884_7689 | 564 |
| 213 | 3300049853 | Ga0501226_000051 | Ga0501226_000051_22816_24621 | 564 |
| 214 | 3300053116 | Ga0500592_000071 | Ga0500592_000071_14362_16152 | 564 |
| 215 | 3300053158 | Ga0500627_0000124 | Ga0500627_0000124_7581_9371 | 564 |
| 216 | 3300001979 | JGI24740J21852_10020496 | JGI24740J21852_100204962 | 566 |
| 217 | 3300005577 | Ga0068857_100052956 | Ga0068857_1000529561 | 566 |
| 218 | 3300005616 | Ga0068852_100060855 | Ga0068852_1000608553 | 566 |
| 219 | 3300025933 | Ga0207706_10029825 | Ga0207706_100298255 | 566 |
| 220 | 3300026041 | Ga0207639_10004750 | Ga0207639_100047507 | 566 |
| 221 | 3300026116 | Ga0207674_10014995 | Ga0207674_100149956 | 566 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1na3-assembly1.cif.gz_A | design of stable alpha-helical arrays from an idealized tpr motif | 0.9264 | 97 | 170 |
| 4jl0-assembly2.cif.gz_B | crystal structure of pcrh in complex with the chaperone binding region of popb | 0.9256 | 446 | 551 |
| 2xcb-assembly1.cif.gz_A | crystal structure of pcrh in complex with the chaperone binding region of popd | 0.9233 | 446 | 551 |
| 1elw-assembly2.cif.gz_B | crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide | 0.921 | 446 | 559 |
| 1ihg-assembly1.cif.gz_A | bovine cyclophilin 40, monoclinic form | 0.9155 | 443 | 553 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5TAA0_61_144_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.9659 | 491 | 550 | 1.25.40.10 |
| af_A4I5Y0_93_186_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.9577 | 490 | 555 | 1.25.40.10 |
| af_Q80XJ3_53_164_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.9501 | 449 | 550 | 1.25.40.10 |
| af_Q8BW49_95_232_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.948 | 443 | 553 | 1.25.40.10 |
| af_Q96AY4_59_170_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.9462 | 449 | 550 | 1.25.40.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7R7CMA2-F1-model_v4 | Tetratricopeptide repeat protein | 0.9472 | 398 | 566 |
|
| AF-A0A7R7CMA2-F1-model_v4 | Tetratricopeptide repeat protein | 0.9365 | 398 | 566 |
|
| AF-A0A531KFS1-F1-model_v4 | Tetratricopeptide repeat protein | 0.9364 | 450 | 566 |
|
| AF-A0A6N7PCI8-F1-model_v4 | Tetratricopeptide repeat protein | 0.9336 | 77 | 254 |
|
| AF-A0A2V9FV73-F1-model_v4 | Tetratricopeptide repeat protein | 0.9314 | 443 | 566 |
|
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar