F333005

General Info

Members Datasets Scaffolds Average Seq Length
221 130 440 224

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10263036|Ga0070666_102630362
Length 264
Sequence MIPRCLRNADEGPRVDLLESRSYPWSTDKAVAAQGNPSMRVLIVEDELQMAEQLRKGLTREGYSVLVANDGEQGLQLARTFEHDLLILDWMLPKLDGLQVARRLRGAGVDTRILMLTARDAPPDIVEGLDCGADDYLIKPFSFDVLLARLRALARRTERAQQPVLRVLDLSVDPAAHRVSRGRDEIKLSAKEFSLLHFLIRRASQIVPRRTLIDAVWGYESNIESNTLDAFIHLLREKVDGPPRHKLIHTVRGVGYCLRESPPT

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
68 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
83 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
90 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
91 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
92 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
128 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
129 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
130 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.19
Metatranscriptomes 0
Isolates 1.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.81
Rhizosphere 96.38
Stem 0
Stem Tuber 0
Unclassified 2.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10263036 3300005335 Bacteria 1223
2 Ga0065707_10002711 3300005295 Bacteria 5756
3 Ga0070658_10757085 3300005327 Bacteria 843
4 Ga0070680_100015732 3300005336 Archaea 5939
5 Ga0070689_100075669 3300005340 Unclassified 2636
6 Ga0070669_100226714 3300005353 Bacteria 1479
7 Ga0070673_100003029 3300005364 Bacteria 10397
8 Ga0070714_100018056 3300005435 Bacteria 5722
9 Ga0070710_10423555 3300005437 Bacteria 897
10 Ga0070711_100359774 3300005439 Bacteria 1172
11 Ga0070694_100101379 3300005444 Bacteria 2037
12 Ga0070694_100103868 3300005444 Bacteria 2014
13 Ga0070662_100319706 3300005457 Bacteria 1265
14 Ga0070679_100092799 3300005530 Bacteria 3006
15 Ga0070684_100311526 3300005535 Bacteria 1445
16 Ga0070684_100330212 3300005535 Bacteria 1401
17 Ga0068853_100184908 3300005539 Bacteria 1891
18 Ga0070695_100013213 3300005545 Bacteria 4961
19 Ga0070695_100336453 3300005545 Bacteria 1127
20 Ga0070704_100075187 3300005549 Bacteria 2466
21 Ga0068855_100016782 3300005563 Bacteria 8805
22 Ga0068855_100253540 3300005563 Bacteria 1962
23 Ga0070664_100238864 3300005564 Bacteria 1631
24 Ga0068856_100030741 3300005614 Bacteria 5251
25 Ga0068856_100117945 3300005614 Bacteria 2655
26 Ga0068856_100208227 3300005614 Bacteria 1970
27 Ga0068852_100077055 3300005616 Bacteria 2946
28 Ga0068864_100069884 3300005618 Bacteria 3054
29 Ga0068858_100104426 3300005842 Bacteria 2643
30 Ga0081539_10029468 3300005985 Bacteria 3427
31 Ga0070712_100961718 3300006175 Bacteria 738
32 Ga0068871_100609110 3300006358 Bacteria 994
33 Ga0075428_100002762 3300006844 Bacteria 19113
34 Ga0075428_100299851 3300006844 Bacteria 1728
35 Ga0075428_100317492 3300006844 Bacteria 1674
36 Ga0075428_100527214 3300006844 Bacteria 1263
37 Ga0075430_100510598 3300006846 Bacteria 992
38 Ga0075436_100390494 3300006914 Bacteria 1007
39 Ga0105240_10000972 3300009093 Bacteria 51104
40 Ga0111539_10161100 3300009094 Bacteria 2624
41 Ga0111539_10250631 3300009094 Bacteria 2062
42 Ga0111539_11044252 3300009094 Bacteria 950
43 Ga0105245_10285026 3300009098 Bacteria 1616
44 Ga0114129_10630095 3300009147 Bacteria 1386
45 Ga0114129_10756464 3300009147 Bacteria 1243
46 Ga0114129_11502258 3300009147 Bacteria 828
47 Ga0105248_10566751 3300009177 Bacteria 1281
48 Ga0105248_11275775 3300009177 Bacteria 831
49 Ga0105237_10046999 3300009545 Bacteria 4339
50 Ga0105238_10107975 3300009551 Bacteria 2764
51 Ga0157373_10250392 3300013100 Bacteria 1253
52 Ga0157370_10010168 3300013104 Archaea 9935
53 Ga0157370_10073412 3300013104 Bacteria 3228
54 Ga0157370_10118964 3300013104 Bacteria 2467
55 Ga0157369_10008066 3300013105 Archaea 12076
56 Ga0157369_10063307 3300013105 Bacteria 3985
57 Ga0157374_10602768 3300013296 Bacteria 1108
58 Ga0157378_10280158 3300013297 Bacteria 1607
59 Ga0163162_10300872 3300013306 Bacteria 1736
60 Ga0157372_10123892 3300013307 Bacteria 2971
61 Ga0157372_10453315 3300013307 Bacteria 1495
62 Ga0163163_10035891 3300014325 Bacteria 4813
63 Ga0163163_10040146 3300014325 Bacteria 4569
64 Ga0163163_10281722 3300014325 Bacteria 1714
65 Ga0163163_10816308 3300014325 Bacteria 996
66 Ga0157380_10080264 3300014326 Bacteria 2666
67 Ga0207680_10325464 3300025903 Bacteria 1076
68 Ga0207705_10137488 3300025909 Bacteria 1822
69 Ga0207705_10562571 3300025909 Bacteria 886
70 Ga0207695_10009202 3300025913 Bacteria 12249
71 Ga0207695_10018786 3300025913 Bacteria 7977
72 Ga0207671_10068453 3300025914 Bacteria 2645
73 Ga0207660_10040468 3300025917 Bacteria 3263
74 Ga0207681_10260013 3300025923 Bacteria 1359
75 Ga0207694_10308288 3300025924 Bacteria 1304
76 Ga0207650_10415802 3300025925 Bacteria 1115
77 Ga0207687_10298589 3300025927 Bacteria 1297
78 Ga0207664_10048002 3300025929 Bacteria 3356
79 Ga0207644_10035587 3300025931 Bacteria 3490
80 Ga0207644_10298867 3300025931 Bacteria 1297
81 Ga0207665_10183579 3300025939 Bacteria 1516
82 Ga0207711_10821861 3300025941 Bacteria 865
83 Ga0207667_10060832 3300025949 Bacteria 3953
84 Ga0207667_10105293 3300025949 Bacteria 2910
85 Ga0207651_10018316 3300025960 Bacteria 4163
86 Ga0207658_10599084 3300025986 Bacteria 990
87 Ga0207703_10218623 3300026035 Bacteria 1702
88 Ga0207702_10042744 3300026078 Bacteria 3802
89 Ga0207702_10103886 3300026078 Bacteria 2514
90 Ga0207702_10257401 3300026078 Bacteria 1642
91 Ga0207676_10325919 3300026095 Bacteria 1412
92 Ga0207698_10051078 3300026142 Bacteria 3159
93 Ga0209974_10077668 3300027876 Bacteria 1138
94 Ga0265323_10042542 3300028653 Bacteria 1644
95 Ga0265325_10021798 3300031241 Bacteria 3514
96 Ga0265325_10162220 3300031241 Bacteria 1051
97 Ga0307409_100345506 3300031995 Bacteria 1402
98 Ga0307416_100186613 3300032002 Bacteria 1950
99 Ga0307414_10883499 3300032004 Unclassified 819
100 Ga0373957_0045030 3300035120 Bacteria 1671
101 Ga0373935_0164949 3300035692 Bacteria 1512
102 Ga0373933_0169105 3300035724 Bacteria 1391
103 Ga0373937_0032096 3300036401 Bacteria 4762
104 Ga0395900_0122176 3300037418 Bacteria 2672
105 Ga0395898_0722835 3300037466 Bacteria 937
106 Ga0436364_0219537 3300037853 Bacteria 5238
107 Ga0395901_0265277 3300038443 Bacteria 1787
108 Ga0436365_0856618 3300039437 Unclassified 867
109 Ga0436360_0229801 3300039438 Bacteria 2103
110 Ga0450908_002697 3300042184 Bacteria 3465
111 Ga0450918_008972 3300042531 Bacteria 1755
112 Ga0466961_0176606 3300044693 Bacteria 1327
113 Ga0466958_0077080 3300045836 Bacteria 2047
114 Ga0466967_0147917 3300045976 Bacteria 2193
115 Ga0466967_0755508 3300045976 Unclassified 964
116 Ga0495580_0011087 3300046472 Bacteria 6985
117 Ga0495594_0149715 3300046499 Bacteria 1325
118 Ga0495642_0110355 3300046528 Bacteria 1176
119 Ga0495599_0382058 3300046678 Bacteria 841
120 Ga0495669_0033106 3300046684 Bacteria 2274
121 Ga0495677_0027578 3300047445 Bacteria 2061
122 Ga0496105_0344716 3300048908 Bacteria 1191
123 Ga0496112_0361418 3300048915 Bacteria 1394
124 Ga0496112_0799312 3300048915 Bacteria 868
125 Ga0496114_0001448 3300048917 Bacteria 17998
126 Ga0501031_0034033 3300049568 Bacteria 3324
127 Ga0501031_0139464 3300049568 Bacteria 1584
128 Ga0501032_0214826 3300049569 Bacteria 1253
129 Ga0501032_0461255 3300049569 Bacteria 813
130 Ga0501033_0002686 3300049570 Bacteria 14931
131 Ga0501033_0057474 3300049570 Bacteria 2875
132 Ga0501033_0101285 3300049570 Bacteria 2101
133 Ga0501034_0028479 3300049571 Bacteria 5685
134 Ga0501034_0032868 3300049571 Bacteria 5267
135 Ga0501034_0085323 3300049571 Bacteria 3159
136 Ga0501034_0145672 3300049571 Bacteria 2346
137 Ga0501034_0159203 3300049571 Bacteria 2230
138 Ga0501034_0182591 3300049571 Bacteria 2062
139 Ga0501034_0225972 3300049571 Bacteria 1822
140 Ga0501034_0326911 3300049571 Bacteria 1465
141 Ga0501034_0858355 3300049571 Bacteria 797
142 Ga0501036_0017496 3300049572 Bacteria 5993
143 Ga0501036_0121407 3300049572 Bacteria 2206
144 Ga0501036_0220298 3300049572 Bacteria 1593
145 Ga0501037_0001521 3300049573 Bacteria 16923
146 Ga0501037_0077128 3300049573 Bacteria 2418
147 Ga0501037_0161061 3300049573 Bacteria 1599
148 Ga0501037_0236787 3300049573 Bacteria 1280
149 Ga0501037_0470480 3300049573 Bacteria 855
150 Ga0501038_0018801 3300049574 Bacteria 6236
151 Ga0501038_0027426 3300049574 Bacteria 5067
152 Ga0501038_0070812 3300049574 Bacteria 2959
153 Ga0501038_0150420 3300049574 Bacteria 1898
154 Ga0501038_0674335 3300049574 Bacteria 776
155 Ga0501039_0011583 3300049575 Bacteria 6714
156 Ga0501039_0197636 3300049575 Bacteria 1581
157 Ga0501040_0186575 3300049576 Bacteria 1471
158 Ga0501040_0195031 3300049576 Bacteria 1438
159 Ga0501040_0327535 3300049576 Bacteria 1096
160 Ga0501041_0480346 3300049577 Unclassified 790
161 Ga0501043_0009356 3300049579 Bacteria 7695
162 Ga0501043_0114373 3300049579 Bacteria 2118
163 Ga0501043_0242984 3300049579 Bacteria 1388
164 Ga0501046_0016763 3300049580 Bacteria 6125
165 Ga0501046_0282536 3300049580 Bacteria 1215
166 Ga0501047_0020163 3300049581 Bacteria 6400
167 Ga0501047_0023088 3300049581 Bacteria 5971
168 Ga0501047_0031666 3300049581 Bacteria 5102
169 Ga0501047_0133329 3300049581 Bacteria 2364
170 Ga0501047_0264637 3300049581 Bacteria 1566
171 Ga0501047_0309454 3300049581 Bacteria 1420
172 Ga0501048_0004948 3300049582 Bacteria 10161
173 Ga0501048_0547050 3300049582 Bacteria 830
174 Ga0501067_0069101 3300049583 Bacteria 1956
175 Ga0501068_0019689 3300049584 Bacteria 3922
176 Ga0501068_0029579 3300049584 Bacteria 3244
177 Ga0501068_0391237 3300049584 Bacteria 896
178 Ga0501069_0005984 3300049585 Bacteria 6346
179 Ga0501069_0014842 3300049585 Bacteria 4171
180 Ga0501069_0064803 3300049585 Bacteria 2042
181 Ga0501069_0436718 3300049585 Bacteria 777
182 Ga0501070_0003117 3300049586 Bacteria 14441
183 Ga0501070_0178039 3300049586 Bacteria 1750
184 Ga0501071_0222108 3300049587 Bacteria 1422
185 Ga0501072_0040227 3300049588 Bacteria 3671
186 Ga0501072_0081477 3300049588 Bacteria 2565
187 Ga0501072_0656774 3300049588 Bacteria 825
188 Ga0501073_0048110 3300049589 Bacteria 2994
189 Ga0501073_0098420 3300049589 Bacteria 2031
190 Ga0501073_0116447 3300049589 Bacteria 1852
191 Ga0501073_0151995 3300049589 Bacteria 1604
192 Ga0501073_0251991 3300049589 Bacteria 1218
193 Ga0501073_0666822 3300049589 Bacteria 718
194 Ga0501079_0006232 3300049741 Bacteria 8956
195 Ga0501080_0012705 3300049742 Bacteria 7722
196 Ga0501080_0199050 3300049742 Bacteria 1839
197 Ga0501080_0302772 3300049742 Bacteria 1449
198 Ga0501083_0001323 3300049744 Bacteria 16798
199 Ga0501083_0009940 3300049744 Bacteria 6716
200 Ga0501083_0157656 3300049744 Bacteria 1485
201 Ga0501083_0180107 3300049744 Bacteria 1380
202 Ga0501083_0291493 3300049744 Bacteria 1061
203 Ga0501035_0013454 3300049822 Bacteria 7553
204 Ga0501035_0060946 3300049822 Bacteria 3358
205 Ga0501044_0326632 3300049823 Bacteria 1457
206 Ga0501044_0411996 3300049823 Bacteria 1262
207 Ga0501044_0508935 3300049823 Bacteria 1104
208 Ga0501045_0871119 3300049824 Bacteria 662
209 nmdc:mga05p37_1148849_c1 3300050507 Bacteria 808
210 nmdc:mga06r32_765824_c1 3300050510 Bacteria 928
211 nmdc:mga08y16_158070_c1 3300050511 Bacteria 2355
212 Ga0501084_0308341 3300054114 Bacteria 1337
213 Ga0501084_0487739 3300054114 Bacteria 1042
214 Ga0501084_0595031 3300054114 Bacteria 934
215 Ga0501082_0016436 3300060353 Bacteria 6368
216 Ga0530510_0001216 3300061734 Bacteria 17205
217 2526061183 2524614857 Bacteria 4146328
218 2526064180 2524614857 Bacteria 4146328
219 2740064687 2739367875 Bacteria 4157290
220 2740065095 2739367875 Bacteria 4157290
221 Ga0070666_10263036
222 Ga0065707_10002711
223 Ga0070658_10757085
224 Ga0070680_100015732
225 Ga0070689_100075669
226 Ga0070669_100226714
227 Ga0070673_100003029
228 Ga0070714_100018056
229 Ga0070710_10423555
230 Ga0070711_100359774
231 Ga0070694_100101379
232 Ga0070694_100103868
233 Ga0070662_100319706
234 Ga0070679_100092799
235 Ga0070684_100311526
236 Ga0070684_100330212
237 Ga0068853_100184908
238 Ga0070695_100013213
239 Ga0070695_100336453
240 Ga0070704_100075187
241 Ga0068855_100016782
242 Ga0068855_100253540
243 Ga0070664_100238864
244 Ga0068856_100030741
245 Ga0068856_100117945
246 Ga0068856_100208227
247 Ga0068852_100077055
248 Ga0068864_100069884
249 Ga0068858_100104426
250 Ga0081539_10029468
251 Ga0070712_100961718
252 Ga0068871_100609110
253 Ga0075428_100002762
254 Ga0075428_100299851
255 Ga0075428_100317492
256 Ga0075428_100527214
257 Ga0075430_100510598
258 Ga0075436_100390494
259 Ga0105240_10000972
260 Ga0111539_10161100
261 Ga0111539_10250631
262 Ga0111539_11044252
263 Ga0105245_10285026
264 Ga0114129_10630095
265 Ga0114129_10756464
266 Ga0114129_11502258
267 Ga0105248_10566751
268 Ga0105248_11275775
269 Ga0105237_10046999
270 Ga0105238_10107975
271 Ga0157373_10250392
272 Ga0157370_10010168
273 Ga0157370_10073412
274 Ga0157370_10118964
275 Ga0157369_10008066
276 Ga0157369_10063307
277 Ga0157374_10602768
278 Ga0157378_10280158
279 Ga0163162_10300872
280 Ga0157372_10123892
281 Ga0157372_10453315
282 Ga0163163_10035891
283 Ga0163163_10040146
284 Ga0163163_10281722
285 Ga0163163_10816308
286 Ga0157380_10080264
287 Ga0207680_10325464
288 Ga0207705_10137488
289 Ga0207705_10562571
290 Ga0207695_10009202
291 Ga0207695_10018786
292 Ga0207671_10068453
293 Ga0207660_10040468
294 Ga0207681_10260013
295 Ga0207694_10308288
296 Ga0207650_10415802
297 Ga0207687_10298589
298 Ga0207664_10048002
299 Ga0207644_10035587
300 Ga0207644_10298867
301 Ga0207665_10183579
302 Ga0207711_10821861
303 Ga0207667_10060832
304 Ga0207667_10105293
305 Ga0207651_10018316
306 Ga0207658_10599084
307 Ga0207703_10218623
308 Ga0207702_10042744
309 Ga0207702_10103886
310 Ga0207702_10257401
311 Ga0207676_10325919
312 Ga0207698_10051078
313 Ga0209974_10077668
314 Ga0265323_10042542
315 Ga0265325_10021798
316 Ga0265325_10162220
317 Ga0307409_100345506
318 Ga0307416_100186613
319 Ga0307414_10883499
320 Ga0373957_0045030
321 Ga0373935_0164949
322 Ga0373933_0169105
323 Ga0373937_0032096
324 Ga0395900_0122176
325 Ga0395898_0722835
326 Ga0436364_0219537
327 Ga0395901_0265277
328 Ga0436365_0856618
329 Ga0436360_0229801
330 Ga0450908_002697
331 Ga0450918_008972
332 Ga0466961_0176606
333 Ga0466958_0077080
334 Ga0466967_0147917
335 Ga0466967_0755508
336 Ga0495580_0011087
337 Ga0495594_0149715
338 Ga0495642_0110355
339 Ga0495599_0382058
340 Ga0495669_0033106
341 Ga0495677_0027578
342 Ga0496105_0344716
343 Ga0496112_0361418
344 Ga0496112_0799312
345 Ga0496114_0001448
346 Ga0501031_0034033
347 Ga0501031_0139464
348 Ga0501032_0214826
349 Ga0501032_0461255
350 Ga0501033_0002686
351 Ga0501033_0057474
352 Ga0501033_0101285
353 Ga0501034_0028479
354 Ga0501034_0032868
355 Ga0501034_0085323
356 Ga0501034_0145672
357 Ga0501034_0159203
358 Ga0501034_0182591
359 Ga0501034_0225972
360 Ga0501034_0326911
361 Ga0501034_0858355
362 Ga0501036_0017496
363 Ga0501036_0121407
364 Ga0501036_0220298
365 Ga0501037_0001521
366 Ga0501037_0077128
367 Ga0501037_0161061
368 Ga0501037_0236787
369 Ga0501037_0470480
370 Ga0501038_0018801
371 Ga0501038_0027426
372 Ga0501038_0070812
373 Ga0501038_0150420
374 Ga0501038_0674335
375 Ga0501039_0011583
376 Ga0501039_0197636
377 Ga0501040_0186575
378 Ga0501040_0195031
379 Ga0501040_0327535
380 Ga0501041_0480346
381 Ga0501043_0009356
382 Ga0501043_0114373
383 Ga0501043_0242984
384 Ga0501046_0016763
385 Ga0501046_0282536
386 Ga0501047_0020163
387 Ga0501047_0023088
388 Ga0501047_0031666
389 Ga0501047_0133329
390 Ga0501047_0264637
391 Ga0501047_0309454
392 Ga0501048_0004948
393 Ga0501048_0547050
394 Ga0501067_0069101
395 Ga0501068_0019689
396 Ga0501068_0029579
397 Ga0501068_0391237
398 Ga0501069_0005984
399 Ga0501069_0014842
400 Ga0501069_0064803
401 Ga0501069_0436718
402 Ga0501070_0003117
403 Ga0501070_0178039
404 Ga0501071_0222108
405 Ga0501072_0040227
406 Ga0501072_0081477
407 Ga0501072_0656774
408 Ga0501073_0048110
409 Ga0501073_0098420
410 Ga0501073_0116447
411 Ga0501073_0151995
412 Ga0501073_0251991
413 Ga0501073_0666822
414 Ga0501079_0006232
415 Ga0501080_0012705
416 Ga0501080_0199050
417 Ga0501080_0302772
418 Ga0501083_0001323
419 Ga0501083_0009940
420 Ga0501083_0157656
421 Ga0501083_0180107
422 Ga0501083_0291493
423 Ga0501035_0013454
424 Ga0501035_0060946
425 Ga0501044_0326632
426 Ga0501044_0411996
427 Ga0501044_0508935
428 Ga0501045_0871119
429 nmdc:mga05p37_1148849_c1
430 nmdc:mga06r32_765824_c1
431 nmdc:mga08y16_158070_c1
432 Ga0501084_0308341
433 Ga0501084_0487739
434 Ga0501084_0595031
435 Ga0501082_0016436
436 Ga0530510_0001216
437 2526061183
438 2526064180
439 2740064687
440 2740065095

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

41

151

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

183

258

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.971 2 118
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9697 1 119
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9691 1 119
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9687 1 119
5hm6-assembly1.cif.gz_A n-terminal domain of bfmr from acinetobacter baumannii 0.9662 2 118
ID Description Score Start End Superfamily
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.989 1 79 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9854 1 84 3.40.50.2300
af_P52076_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9764 1 79 3.40.50.2300
af_Q2FY79_1_81_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9764 2 79 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9746 2 117 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A0S6VSY2-F1-model_v4 Type IV pilus assembly protein PilB 0.9817 2 118 GO:0000160
GO:0005524
GO:0005886
GO:0016887
AF-A0A2J0KYQ6-F1-model_v4 Response regulatory domain-containing protein 0.9731 2 115 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2H6GJT0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9725 2 116 GO:0000155
GO:0005524
AF-A0A3M1G4D9-F1-model_v4 Response regulator 0.9725 1 118 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2T1ERA0-F1-model_v4 GGDEF domain-containing response regulator 0.9712 1 116 GO:0000160

Map