F332725

General Info

Members Datasets Scaffolds Average Seq Length
220 158 213 283

Family's Representative Sequence

Representative Sequence 3300049587|Ga0501071_0002894|Ga0501071_0002894_7887_8843
Length 318
Sequence MQARRLALRAQRGETYPRESGDAGRQEAFMSLKGKTLFITGASRGIGLAIALRAAHDGANVAIAAKTDRPHPKLAGTIHSAAQEIEKAGGHALPLTVDVRDEAAVIAAVDKAAAHFGGIDICVNNASAISLTGTLATEMKRYDLMNQVNVRGTFLVSKACIPHLRRAANPHILVLAPPLELNPHWFAPHLAYSLAKFGMSLCVLGLAEEFRQDKIAVNALWPRTIIATAAIEFALGGPEALRRARKPEILADAAYVIFNQPSQQFTGEFLIDDALLYENGVRDFDRYRVDPTMPLALDLYVPEDAPLPPTVTLGPLPD

Samples

Sample ID Description Type Environment
1 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
2 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
3 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
4 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
5 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
116 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 641522639 Methylobacterium sp. 4-46 Isolate Nodule
158 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.91
Metatranscriptomes 0.91
Isolates 3.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.36
Nodule 1.82
Rhizoplane 0.45
Rhizosphere 92.73
Stem 0
Stem Tuber 0
Unclassified 3.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10004109 3300002459 Bacteria 2951
2 Ga0065707_10096481 3300005295 Bacteria 3264
3 Ga0070683_100062927 3300005329 Bacteria 3450
4 Ga0070690_100314115 3300005330 Bacteria 1127
5 Ga0070670_100000238 3300005331 Bacteria 49857
6 Ga0070666_10000085 3300005335 Bacteria 66273
7 Ga0070680_100006479 3300005336 Bacteria 8903
8 Ga0070680_100026090 3300005336 Bacteria 4673
9 Ga0070680_100079381 3300005336 Bacteria 2705
10 Ga0070689_100443798 3300005340 Bacteria 1103
11 Ga0070668_100026943 3300005347 Bacteria 4362
12 Ga0070668_100052273 3300005347 Bacteria 3149
13 Ga0070669_100000023 3300005353 Bacteria 174496
14 Ga0070675_100045306 3300005354 Bacteria 3599
15 Ga0070671_100000017 3300005355 Bacteria 154265
16 Ga0070667_100032355 3300005367 Bacteria 4362
17 Ga0070667_100112457 3300005367 Bacteria 2362
18 Ga0070713_100242244 3300005436 Bacteria 1642
19 Ga0070705_100002517 3300005440 Bacteria 9212
20 Ga0070708_100066043 3300005445 Bacteria 3246
21 Ga0070708_100236042 3300005445 Bacteria 1716
22 Ga0070681_10001707 3300005458 Bacteria 19675
23 Ga0070681_10033891 3300005458 Bacteria 5127
24 Ga0070706_100000410 3300005467 Bacteria 51662
25 Ga0070707_100109727 3300005468 Bacteria 2676
26 Ga0070679_100000358 3300005530 Bacteria 38906
27 Ga0070679_100063069 3300005530 Bacteria 3694
28 Ga0070679_100106907 3300005530 Bacteria 2784
29 Ga0070684_100077071 3300005535 Bacteria 2944
30 Ga0070665_100026483 3300005548 Bacteria 5838
31 Ga0068855_100008208 3300005563 Bacteria 12625
32 Ga0068855_100016363 3300005563 Bacteria 8918
33 Ga0068855_100464578 3300005563 Bacteria 1380
34 Ga0068859_100000250 3300005617 Bacteria 53166
35 Ga0068864_100002067 3300005618 Bacteria 16589
36 Ga0068861_100000038 3300005719 Bacteria 60215
37 Ga0068863_100000356 3300005841 Bacteria 46496
38 Ga0068858_100003647 3300005842 Bacteria 15233
39 Ga0068860_100000636 3300005843 Bacteria 41320
40 Ga0068862_100000758 3300005844 Bacteria 32235
41 Ga0068862_100055332 3300005844 Bacteria 3398
42 Ga0081455_10000181 3300005937 Bacteria 79615
43 Ga0070717_10069713 3300006028 Bacteria 2929
44 Ga0075363_100144026 3300006048 Bacteria 1343
45 Ga0075428_100829780 3300006844 Bacteria 982
46 Ga0075431_100256915 3300006847 Bacteria 1774
47 Ga0075429_100085629 3300006880 Bacteria 2747
48 Ga0097620_100000250 3300006931 Bacteria 53166
49 Ga0105240_10000755 3300009093 Bacteria 58976
50 Ga0105240_10010623 3300009093 Bacteria 12934
51 Ga0105245_10472080 3300009098 Bacteria 1266
52 Ga0105247_10000333 3300009101 Bacteria 41389
53 Ga0114129_10010401 3300009147 Bacteria 13271
54 Ga0105242_10428642 3300009176 Bacteria 1241
55 Ga0105248_10054806 3300009177 Bacteria 4472
56 Ga0105237_10339788 3300009545 Bacteria 1506
57 Ga0105237_10454563 3300009545 Bacteria 1287
58 Ga0105238_10005046 3300009551 Bacteria 13050
59 Ga0105249_10000309 3300009553 Bacteria 49519
60 Ga0157370_10002525 3300013104 Bacteria 22010
61 Ga0157370_10222327 3300013104 Bacteria 1749
62 Ga0157369_10060104 3300013105 Bacteria 4098
63 Ga0163162_10000207 3300013306 Bacteria 54515
64 Ga0163163_10223329 3300014325 Bacteria 1933
65 Ga0157380_10050542 3300014326 Bacteria 3284
66 Ga0157380_10410571 3300014326 Bacteria 1288
67 Ga0157379_10001250 3300014968 Bacteria 20614
68 Ga0206356_11029355 3300020070 Bacteria 2274
69 Ga0213873_10014168 3300021358 Bacteria 1763
70 Ga0213876_10035714 3300021384 Bacteria 2622
71 Ga0224712_10002447 3300022467 Bacteria 4582
72 Ga0207673_1011796 3300025290 Bacteria 1134
73 Ga0207697_10000005 3300025315 Bacteria 85907
74 Ga0207710_10000551 3300025900 Bacteria 22502
75 Ga0207680_10000038 3300025903 Bacteria 72292
76 Ga0207643_10105662 3300025908 Bacteria 1654
77 Ga0207684_10006688 3300025910 Bacteria 10476
78 Ga0207707_10000054 3300025912 Bacteria 115337
79 Ga0207707_10016029 3300025912 Bacteria 6536
80 Ga0207707_10325986 3300025912 Bacteria 1325
81 Ga0207695_10005511 3300025913 Bacteria 16755
82 Ga0207695_10062366 3300025913 Bacteria 3849
83 Ga0207671_10160740 3300025914 Bacteria 1739
84 Ga0207671_10554431 3300025914 Bacteria 916
85 Ga0207660_10016987 3300025917 Bacteria 4827
86 Ga0207660_10041789 3300025917 Bacteria 3215
87 Ga0207660_10056251 3300025917 Bacteria 2814
88 Ga0207652_10008968 3300025921 Bacteria 8061
89 Ga0207681_10000004 3300025923 Bacteria 559005
90 Ga0207650_10000795 3300025925 Bacteria 24203
91 Ga0207650_10102928 3300025925 Bacteria 2201
92 Ga0207687_10005362 3300025927 Bacteria 8484
93 Ga0207700_10025063 3300025928 Bacteria 4136
94 Ga0207644_10000024 3300025931 Bacteria 154283
95 Ga0207711_10032422 3300025941 Bacteria 4418
96 Ga0207661_10032356 3300025944 Bacteria 4051
97 Ga0207667_10002273 3300025949 Bacteria 24147
98 Ga0207667_10030841 3300025949 Bacteria 5794
99 Ga0207712_10000805 3300025961 Bacteria 23097
100 Ga0207668_10000121 3300025972 Bacteria 54684
101 Ga0207658_10000725 3300025986 Bacteria 28510
102 Ga0207703_10031839 3300026035 Bacteria 4172
103 Ga0207708_10098478 3300026075 Bacteria 2260
104 Ga0207702_10077120 3300026078 Bacteria 2881
105 Ga0207641_10009408 3300026088 Bacteria 8051
106 Ga0207676_10006615 3300026095 Bacteria 8199
107 Ga0207675_100000028 3300026118 Bacteria 109884
108 Ga0268266_10018004 3300028379 Bacteria 6022
109 Ga0268265_10000046 3300028380 Bacteria 179361
110 Ga0268264_10000180 3300028381 Bacteria 134339
111 Ga0265334_10000011 3300028573 Bacteria 178287
112 Ga0265318_10061641 3300028577 Bacteria 1397
113 Ga0307515_10222553 3300028794 Bacteria 1701
114 Ga0265338_10027004 3300028800 Bacteria 5773
115 Ga0265338_10118550 3300028800 Bacteria 2115
116 Ga0265332_10068882 3300031238 Bacteria 1508
117 Ga0265320_10001650 3300031240 Bacteria 15881
118 Ga0265331_10135360 3300031250 Bacteria 1122
119 Ga0307513_10210711 3300031456 Bacteria 1775
120 Ga0307509_10002010 3300031507 Bacteria 33621
121 Ga0265314_10008769 3300031711 Bacteria 8646
122 Ga0265314_10071608 3300031711 Bacteria 2318
123 Ga0307516_10000427 3300031730 Bacteria 55250
124 Ga0307410_10072186 3300031852 Bacteria 2396
125 Ga0307407_10119185 3300031903 Bacteria 1670
126 Ga0307407_10180009 3300031903 Bacteria 1400
127 Ga0307412_10163612 3300031911 Bacteria 1656
128 Ga0307416_100295932 3300032002 Bacteria 1605
129 Ga0307411_10108533 3300032005 Bacteria 1980
130 Ga0307415_100179055 3300032126 Bacteria 1661
131 Ga0373961_0004909 3300035241 Bacteria 3212
132 Ga0395898_0170247 3300037466 Bacteria 2082
133 Ga0395905_0082348 3300037471 Bacteria 3016
134 Ga0395905_0251667 3300037471 Bacteria 1650
135 Ga0436365_0156470 3300039437 Bacteria 3480
136 Ga0436362_0872561 3300039453 Bacteria 3372
137 Ga0439443_020618 3300042003 Bacteria 1037
138 Ga0466969_0009294 3300044656 Bacteria 5213
139 Ga0466972_0050850 3300044658 Bacteria 2000
140 Ga0453684_0098520 3300044712 Bacteria 3583
141 Ga0466959_0091849 3300045049 Bacteria 2180
142 Ga0495650_0014730 3300046471 Bacteria 4045
143 Ga0495650_0075313 3300046471 Bacteria 1314
144 Ga0496109_0000667 3300048912 Bacteria 28438
145 Ga0496126_0005918 3300048929 Bacteria 13788
146 Ga0501031_0182935 3300049568 Bacteria 1369
147 Ga0501031_0305834 3300049568 Bacteria 1030
148 Ga0501032_0266147 3300049569 Bacteria 1111
149 Ga0501033_0060498 3300049570 Bacteria 2794
150 Ga0501033_0104885 3300049570 Bacteria 2061
151 Ga0501033_0113426 3300049570 Bacteria 1971
152 Ga0501034_0372619 3300049571 Bacteria 1354
153 Ga0501036_0032120 3300049572 Bacteria 4436
154 Ga0501036_0124872 3300049572 Bacteria 2173
155 Ga0501036_0195487 3300049572 Bacteria 1702
156 Ga0501037_0011060 3300049573 Bacteria 6640
157 Ga0501037_0137372 3300049573 Bacteria 1750
158 Ga0501038_0004493 3300049574 Bacteria 12973
159 Ga0501039_0009567 3300049575 Bacteria 7388
160 Ga0501039_0039510 3300049575 Bacteria 3644
161 Ga0501040_0005199 3300049576 Bacteria 8412
162 Ga0501041_0042441 3300049577 Bacteria 2764
163 Ga0501042_0022428 3300049578 Bacteria 4409
164 Ga0501042_0031762 3300049578 Bacteria 3736
165 Ga0501046_0022913 3300049580 Bacteria 5142
166 Ga0501046_0108098 3300049580 Bacteria 2127
167 Ga0501047_0163265 3300049581 Bacteria 2099
168 Ga0501047_0299321 3300049581 Bacteria 1451
169 Ga0501048_0107299 3300049582 Bacteria 1971
170 Ga0501048_0152896 3300049582 Bacteria 1632
171 Ga0501068_0012413 3300049584 Bacteria 4831
172 Ga0501068_0203735 3300049584 Bacteria 1255
173 Ga0501068_0232764 3300049584 Bacteria 1172
174 Ga0501071_0002894 3300049587 Bacteria 10589
175 Ga0501071_0363586 3300049587 Bacteria 1102
176 Ga0501072_0003554 3300049588 Bacteria 11729
177 Ga0501072_0015995 3300049588 Bacteria 5752
178 Ga0501072_0098547 3300049588 Bacteria 2324
179 Ga0501072_0198010 3300049588 Bacteria 1602
180 Ga0501073_0042838 3300049589 Bacteria 3194
181 Ga0501073_0110498 3300049589 Bacteria 1907
182 Ga0501074_0032766 3300049590 Bacteria 3764
183 Ga0501074_0265752 3300049590 Bacteria 1219
184 Ga0501075_0002597 3300049591 Bacteria 12060
185 Ga0501075_0165957 3300049591 Bacteria 1684
186 Ga0501076_0001209 3300049592 Bacteria 17163
187 Ga0501076_0027770 3300049592 Bacteria 4388
188 Ga0501076_0081249 3300049592 Bacteria 2602
189 Ga0501076_0145045 3300049592 Bacteria 1930
190 Ga0501077_0026687 3300049593 Bacteria 3666
191 Ga0501079_0014114 3300049741 Bacteria 6089
192 Ga0501079_0019846 3300049741 Bacteria 5134
193 Ga0501079_0208611 3300049741 Bacteria 1526
194 Ga0501080_0017889 3300049742 Bacteria 6560
195 Ga0501080_0042385 3300049742 Bacteria 4238
196 Ga0501081_0008439 3300049743 Bacteria 6690
197 Ga0501081_0135672 3300049743 Bacteria 1761
198 Ga0501081_0175472 3300049743 Bacteria 1549
199 Ga0501081_0366638 3300049743 Bacteria 1063
200 Ga0501035_0234952 3300049822 Bacteria 1561
201 Ga0501045_0005490 3300049824 Bacteria 8775
202 Ga0501045_0071288 3300049824 Bacteria 2557
203 Ga0501045_0194841 3300049824 Bacteria 1510
204 nmdc:mga09592_223884_c1 3300050508 Bacteria 1630
205 nmdc:mga06r32_236692_c1 3300050510 Bacteria 1813
206 Ga0500595_003828 3300053119 Bacteria 6916
207 Ga0500637_0165723 3300053178 Bacteria 1272
208 Ga0501084_0036921 3300054114 Bacteria 4082
209 Ga0501084_0040500 3300054114 Bacteria 3898
210 Ga0501082_0026840 3300060353 Bacteria 4962
211 Ga0501082_0316953 3300060353 Bacteria 1358
212 Ga0530510_0055923 3300061734 Bacteria 2850
213 Ga0530510_0248281 3300061734 Bacteria 1326

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049584 Ga0501068_0232764 Ga0501068_0232764_239_1006 255
2 3300005336 Ga0070680_100079381 Ga0070680_1000793812 257
3 3300005458 Ga0070681_10033891 Ga0070681_100338914 257
4 3300005530 Ga0070679_100106907 Ga0070679_1001069073 257
5 3300005563 Ga0068855_100016363 Ga0068855_1000163636 257
6 3300009093 Ga0105240_10010623 Ga0105240_100106234 257
7 3300013104 Ga0157370_10222327 Ga0157370_102223273 257
8 3300025912 Ga0207707_10016029 Ga0207707_100160294 257
9 3300025913 Ga0207695_10062366 Ga0207695_100623662 257
10 3300025917 Ga0207660_10041789 Ga0207660_100417893 257
11 3300025921 Ga0207652_10008968 Ga0207652_100089682 257
12 3300025949 Ga0207667_10030841 Ga0207667_100308412 257
13 3300044712 Ga0453684_0098520 Ga0453684_0098520_674_1495 261
14 3300005340 Ga0070689_100443798 Ga0070689_1004437981 264
15 3300009098 Ga0105245_10472080 Ga0105245_104720802 264
16 3300005535 Ga0070684_100077071 Ga0070684_1000770713 269
17 3300006844 Ga0075428_100829780 Ga0075428_1008297801 270
18 3300006847 Ga0075431_100256915 Ga0075431_1002569152 270
19 3300006880 Ga0075429_100085629 Ga0075429_1000856292 270
20 3300009147 Ga0114129_10010401 Ga0114129_100104017 270
21 3300044656 Ga0466969_0009294 Ga0466969_0009294_2001_2849 270
22 3300045049 Ga0466959_0091849 Ga0466959_0091849_1087_1935 270
23 3300049581 Ga0501047_0163265 Ga0501047_0163265_114_929 270
24 3300050508 nmdc:mga09592_223884_c1 nmdc:mga09592_223884_c1_258_1085 270
25 3300050510 nmdc:mga06r32_236692_c1 nmdc:mga06r32_236692_c1_380_1207 270
26 iso_pu_bacteria 2881955468 2881958614 270
27 3300042003 Ga0439443_020618 Ga0439443_020618_20_850 271
28 3300046471 Ga0495650_0014730 Ga0495650_0014730_624_1454 271
29 3300049568 Ga0501031_0305834 Ga0501031_0305834_10_882 271
30 3300049572 Ga0501036_0195487 Ga0501036_0195487_205_1077 271
31 3300049592 Ga0501076_0081249 Ga0501076_0081249_1592_2464 271
32 3300005329 Ga0070683_100062927 Ga0070683_1000629273 272
33 3300005336 Ga0070680_100006479 Ga0070680_1000064797 272
34 3300005336 Ga0070680_100026090 Ga0070680_1000260904 272
35 3300005354 Ga0070675_100045306 Ga0070675_1000453062 272
36 3300005367 Ga0070667_100112457 Ga0070667_1001124573 272
37 3300005436 Ga0070713_100242244 Ga0070713_1002422441 272
38 3300005458 Ga0070681_10001707 Ga0070681_1000170716 272
39 3300005530 Ga0070679_100000358 Ga0070679_10000035829 272
40 3300005530 Ga0070679_100063069 Ga0070679_1000630693 272
41 3300005548 Ga0070665_100026483 Ga0070665_1000264831 272
42 3300005563 Ga0068855_100008208 Ga0068855_1000082087 272
43 3300009093 Ga0105240_10000755 Ga0105240_1000075549 272
44 3300009545 Ga0105237_10339788 Ga0105237_103397881 272
45 3300009545 Ga0105237_10454563 Ga0105237_104545631 272
46 3300009551 Ga0105238_10005046 Ga0105238_100050468 272
47 3300013104 Ga0157370_10002525 Ga0157370_100025254 272
48 3300013105 Ga0157369_10060104 Ga0157369_100601044 272
49 3300020070 Ga0206356_11029355 Ga0206356_110293552 272
50 3300022467 Ga0224712_10002447 Ga0224712_100024473 272
51 3300025912 Ga0207707_10000054 Ga0207707_1000005421 272
52 3300025912 Ga0207707_10325986 Ga0207707_103259862 272
53 3300025913 Ga0207695_10005511 Ga0207695_100055119 272
54 3300025914 Ga0207671_10160740 Ga0207671_101607403 272
55 3300025914 Ga0207671_10554431 Ga0207671_105544311 272
56 3300025917 Ga0207660_10016987 Ga0207660_100169873 272
57 3300025917 Ga0207660_10056251 Ga0207660_100562514 272
58 3300025928 Ga0207700_10025063 Ga0207700_100250633 272
59 3300025944 Ga0207661_10032356 Ga0207661_100323564 272
60 3300025949 Ga0207667_10002273 Ga0207667_100022733 272
61 3300026078 Ga0207702_10077120 Ga0207702_100771201 272
62 3300028379 Ga0268266_10018004 Ga0268266_100180041 272
63 3300031507 Ga0307509_10002010 Ga0307509_1000201011 272
64 3300031903 Ga0307407_10119185 Ga0307407_101191852 272
65 3300037466 Ga0395898_0170247 Ga0395898_0170247_589_1443 272
66 3300037471 Ga0395905_0082348 Ga0395905_0082348_2097_2915 272
67 3300046471 Ga0495650_0075313 Ga0495650_0075313_455_1276 272
68 3300048929 Ga0496126_0005918 Ga0496126_0005918_10060_10911 272
69 3300049569 Ga0501032_0266147 Ga0501032_0266147_200_1018 272
70 3300049570 Ga0501033_0104885 Ga0501033_0104885_1021_1839 272
71 3300049588 Ga0501072_0098547 Ga0501072_0098547_544_1362 272
72 3300049592 Ga0501076_0145045 Ga0501076_0145045_274_1143 272
73 3300049743 Ga0501081_0366638 Ga0501081_0366638_32_850 272
74 3300053119 Ga0500595_003828 Ga0500595_003828_1287_2135 272
75 3300053178 Ga0500637_0165723 Ga0500637_0165723_401_1249 272
76 3300005844 Ga0068862_100055332 Ga0068862_1000553322 273
77 3300014326 Ga0157380_10050542 Ga0157380_100505423 273
78 3300025908 Ga0207643_10105662 Ga0207643_101056622 273
79 3300025925 Ga0207650_10102928 Ga0207650_101029282 273
80 3300025927 Ga0207687_10005362 Ga0207687_100053622 273
81 3300028577 Ga0265318_10061641 Ga0265318_100616412 273
82 3300028794 Ga0307515_10222553 Ga0307515_102225532 273
83 3300028800 Ga0265338_10118550 Ga0265338_101185502 273
84 3300031238 Ga0265332_10068882 Ga0265332_100688822 273
85 3300031240 Ga0265320_10001650 Ga0265320_1000165012 273
86 3300031456 Ga0307513_10210711 Ga0307513_102107112 273
87 3300031711 Ga0265314_10008769 Ga0265314_100087694 273
88 3300031711 Ga0265314_10071608 Ga0265314_100716083 273
89 3300005937 Ga0081455_10000181 Ga0081455_1000018164 274
90 3300005445 Ga0070708_100066043 Ga0070708_1000660435 275
91 3300005467 Ga0070706_100000410 Ga0070706_10000041025 275
92 3300005468 Ga0070707_100109727 Ga0070707_1001097272 275
93 3300006028 Ga0070717_10069713 Ga0070717_100697132 275
94 3300014326 Ga0157380_10410571 Ga0157380_104105712 275
95 3300025910 Ga0207684_10006688 Ga0207684_100066886 275
96 3300048912 Ga0496109_0000667 Ga0496109_0000667_24902_25735 275
97 3300049587 Ga0501071_0363586 Ga0501071_0363586_211_1038 275
98 3300049588 Ga0501072_0198010 Ga0501072_0198010_516_1343 275
99 3300049741 Ga0501079_0208611 Ga0501079_0208611_331_1158 275
100 3300049743 Ga0501081_0175472 Ga0501081_0175472_221_1048 275
101 3300049822 Ga0501035_0234952 Ga0501035_0234952_441_1268 275
102 3300049824 Ga0501045_0194841 Ga0501045_0194841_476_1303 275
103 3300054114 Ga0501084_0040500 Ga0501084_0040500_2408_3235 275
104 3300061734 Ga0530510_0248281 Ga0530510_0248281_251_1078 275
105 3300031730 Ga0307516_10000427 Ga0307516_1000042725 276
106 3300035241 Ga0373961_0004909 Ga0373961_0004909_744_1616 276
107 3300028800 Ga0265338_10027004 Ga0265338_100270043 277
108 3300005347 Ga0070668_100052273 Ga0070668_1000522731 278
109 3300009176 Ga0105242_10428642 Ga0105242_104286422 279
110 3300049571 Ga0501034_0372619 Ga0501034_0372619_458_1306 279
111 iso_pu_bacteria 2545555834 2545677877 279
112 iso_pu_bacteria 2829745981 2829746118 279
113 iso_pu_bacteria 2894232714 2894236659 279
114 iso_pu_bacteria 641522639 641642597 279
115 iso_pu_bacteria 643348564 643600546 279
116 3300028573 Ga0265334_10000011 Ga0265334_1000001177 280
117 3300049581 Ga0501047_0299321 Ga0501047_0299321_290_1141 280
118 3300049588 Ga0501072_0003554 Ga0501072_0003554_1386_2255 280
119 3300049591 Ga0501075_0165957 Ga0501075_0165957_248_1117 280
120 3300049592 Ga0501076_0027770 Ga0501076_0027770_575_1444 280
121 3300049742 Ga0501080_0017889 Ga0501080_0017889_3014_3883 280
122 3300060353 Ga0501082_0026840 Ga0501082_0026840_3072_3941 280
123 3300037471 Ga0395905_0251667 Ga0395905_0251667_668_1516 282
124 3300026075 Ga0207708_10098478 Ga0207708_100984782 283
125 3300031852 Ga0307410_10072186 Ga0307410_100721863 283
126 3300031903 Ga0307407_10180009 Ga0307407_101800092 283
127 3300031911 Ga0307412_10163612 Ga0307412_101636123 283
128 3300032002 Ga0307416_100295932 Ga0307416_1002959322 283
129 3300032005 Ga0307411_10108533 Ga0307411_101085332 283
130 3300032126 Ga0307415_100179055 Ga0307415_1001790552 283
131 3300044658 Ga0466972_0050850 Ga0466972_0050850_912_1772 283
132 iso_pu_bacteria 2842698319 2842698548 283
133 3300006048 Ga0075363_100144026 Ga0075363_1001440261 287
134 3300031250 Ga0265331_10135360 Ga0265331_101353601 287
135 3300005563 Ga0068855_100464578 Ga0068855_1004645782 288
136 3300021358 Ga0213873_10014168 Ga0213873_100141682 288
137 3300021384 Ga0213876_10035714 Ga0213876_100357142 288
138 3300039437 Ga0436365_0156470 Ga0436365_0156470_853_1725 288
139 3300039453 Ga0436362_0872561 Ga0436362_0872561_1902_2774 288
140 3300049568 Ga0501031_0182935 Ga0501031_0182935_146_1015 288
141 3300049570 Ga0501033_0060498 Ga0501033_0060498_171_1040 288
142 3300049570 Ga0501033_0113426 Ga0501033_0113426_1024_1893 288
143 3300049572 Ga0501036_0032120 Ga0501036_0032120_2643_3512 288
144 3300049572 Ga0501036_0124872 Ga0501036_0124872_1141_2010 288
145 3300049573 Ga0501037_0011060 Ga0501037_0011060_3053_3922 288
146 3300049573 Ga0501037_0137372 Ga0501037_0137372_86_955 288
147 3300049574 Ga0501038_0004493 Ga0501038_0004493_878_1747 288
148 3300049575 Ga0501039_0009567 Ga0501039_0009567_2611_3480 288
149 3300049575 Ga0501039_0039510 Ga0501039_0039510_2529_3398 288
150 3300049576 Ga0501040_0005199 Ga0501040_0005199_3501_4370 288
151 3300049577 Ga0501041_0042441 Ga0501041_0042441_634_1503 288
152 3300049578 Ga0501042_0022428 Ga0501042_0022428_1383_2252 288
153 3300049578 Ga0501042_0031762 Ga0501042_0031762_357_1226 288
154 3300049580 Ga0501046_0022913 Ga0501046_0022913_631_1500 288
155 3300049580 Ga0501046_0108098 Ga0501046_0108098_455_1324 288
156 3300049582 Ga0501048_0107299 Ga0501048_0107299_904_1773 288
157 3300049582 Ga0501048_0152896 Ga0501048_0152896_581_1450 288
158 3300049584 Ga0501068_0012413 Ga0501068_0012413_3147_4016 288
159 3300049584 Ga0501068_0203735 Ga0501068_0203735_266_1135 288
160 3300049588 Ga0501072_0015995 Ga0501072_0015995_3317_4186 288
161 3300049589 Ga0501073_0042838 Ga0501073_0042838_2172_3041 288
162 3300049589 Ga0501073_0110498 Ga0501073_0110498_882_1751 288
163 3300049590 Ga0501074_0032766 Ga0501074_0032766_1557_2426 288
164 3300049590 Ga0501074_0265752 Ga0501074_0265752_180_1049 288
165 3300049591 Ga0501075_0002597 Ga0501075_0002597_3819_4688 288
166 3300049592 Ga0501076_0001209 Ga0501076_0001209_10041_10910 288
167 3300049593 Ga0501077_0026687 Ga0501077_0026687_980_1849 288
168 3300049741 Ga0501079_0014114 Ga0501079_0014114_889_1758 288
169 3300049741 Ga0501079_0019846 Ga0501079_0019846_1255_2124 288
170 3300049742 Ga0501080_0042385 Ga0501080_0042385_3092_3961 288
171 3300049743 Ga0501081_0008439 Ga0501081_0008439_4513_5382 288
172 3300049743 Ga0501081_0135672 Ga0501081_0135672_706_1575 288
173 3300049824 Ga0501045_0005490 Ga0501045_0005490_2132_3001 288
174 3300049824 Ga0501045_0071288 Ga0501045_0071288_1027_1896 288
175 3300054114 Ga0501084_0036921 Ga0501084_0036921_2234_3103 288
176 3300060353 Ga0501082_0316953 Ga0501082_0316953_276_1145 288
177 3300061734 Ga0530510_0055923 Ga0530510_0055923_224_1093 288
178 3300002459 JGI24751J29686_10004109 JGI24751J29686_100041092 289
179 3300005295 Ga0065707_10096481 Ga0065707_100964812 289
180 3300005330 Ga0070690_100314115 Ga0070690_1003141151 289
181 3300005331 Ga0070670_100000238 Ga0070670_10000023842 289
182 3300005335 Ga0070666_10000085 Ga0070666_100000859 289
183 3300005347 Ga0070668_100026943 Ga0070668_1000269433 289
184 3300005353 Ga0070669_100000023 Ga0070669_100000023112 289
185 3300005355 Ga0070671_100000017 Ga0070671_10000001740 289
186 3300005367 Ga0070667_100032355 Ga0070667_1000323553 289
187 3300005440 Ga0070705_100002517 Ga0070705_10000251710 289
188 3300005445 Ga0070708_100236042 Ga0070708_1002360423 289
189 3300005617 Ga0068859_100000250 Ga0068859_10000025034 289
190 3300005618 Ga0068864_100002067 Ga0068864_1000020675 289
191 3300005719 Ga0068861_100000038 Ga0068861_10000003824 289
192 3300005841 Ga0068863_100000356 Ga0068863_10000035635 289
193 3300005842 Ga0068858_100003647 Ga0068858_10000364712 289
194 3300005843 Ga0068860_100000636 Ga0068860_10000063627 289
195 3300005844 Ga0068862_100000758 Ga0068862_10000075816 289
196 3300006931 Ga0097620_100000250 Ga0097620_10000025021 289
197 3300009101 Ga0105247_10000333 Ga0105247_1000033324 289
198 3300009177 Ga0105248_10054806 Ga0105248_100548063 289
199 3300009553 Ga0105249_10000309 Ga0105249_1000030935 289
200 3300013306 Ga0163162_10000207 Ga0163162_1000020712 289
201 3300014325 Ga0163163_10223329 Ga0163163_102233293 289
202 3300014968 Ga0157379_10001250 Ga0157379_1000125013 289
203 3300025290 Ga0207673_1011796 Ga0207673_10117962 289
204 3300025315 Ga0207697_10000005 Ga0207697_1000000554 289
205 3300025900 Ga0207710_10000551 Ga0207710_100005517 289
206 3300025903 Ga0207680_10000038 Ga0207680_1000003810 289
207 3300025923 Ga0207681_10000004 Ga0207681_1000000466 289
208 3300025925 Ga0207650_10000795 Ga0207650_1000079510 289
209 3300025931 Ga0207644_10000024 Ga0207644_1000002441 289
210 3300025941 Ga0207711_10032422 Ga0207711_100324224 289
211 3300025961 Ga0207712_10000805 Ga0207712_1000080526 289
212 3300025972 Ga0207668_10000121 Ga0207668_1000012141 289
213 3300025986 Ga0207658_10000725 Ga0207658_1000072513 289
214 3300026035 Ga0207703_10031839 Ga0207703_100318393 289
215 3300026088 Ga0207641_10009408 Ga0207641_100094087 289
216 3300026095 Ga0207676_10006615 Ga0207676_100066155 289
217 3300026118 Ga0207675_100000028 Ga0207675_10000002839 289
218 3300028380 Ga0268265_10000046 Ga0268265_1000004667 289
219 3300028381 Ga0268264_10000180 Ga0268264_10000180129 289
220 3300049587 Ga0501071_0002894 Ga0501071_0002894_7887_8843 289

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

35

233

0.9

PF08659

KR

KR domain

35

167

0.84

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

41

274

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kvo-assembly3.cif.gz_A crystal structure of the catalytic domain of human hydroxysteroid dehydrogenase like 2 (hsdl2) 0.9872 4 274
3kvo-assembly3.cif.gz_B crystal structure of the catalytic domain of human hydroxysteroid dehydrogenase like 2 (hsdl2) 0.9841 1 274
3e03-assembly1.cif.gz_C-2 crystal structure of a putative dehydrogenase from xanthomonas campestris 0.9791 3 274
3e03-assembly3.cif.gz_A-4 crystal structure of a putative dehydrogenase from xanthomonas campestris 0.9773 1 274
3e03-assembly1.cif.gz_C-2 crystal structure of a putative dehydrogenase from xanthomonas campestris 0.9685 3 274
ID Description Score Start End Superfamily
af_Q6P5L8_1_275_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9881 1 274 3.40.50.720
af_Q6P5L8_1_275_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9703 1 274 3.40.50.720
3h7aB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9191 6 243 3.40.50.720
3rkrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.917 4 243 3.40.50.720
3tfoB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9105 7 243 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q5WQT0-F1-model_v4 Short chain dehydrogenase 0.9975 127 274 GO:0016491
AF-A0A534CM17-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9974 3 250
AF-A0A838UKN2-F1-model_v4 SDR family oxidoreductase 0.9958 3 169
AF-A0A7Y3DJK7-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9957 4 274
AF-A0A3C7VUV0-F1-model_v4 Short chain dehydrogenase 0.9955 13 190

Feature Viewer

pLDDT pTM Quality
95.08 0.94 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map