F332599

General Info

Members Datasets Scaffolds Average Seq Length
220 136 440 408

Family's Representative Sequence

Representative Sequence 3300046524|Ga0495648_0022486|Ga0495648_0022486_1500_2825
Length 434
Sequence LTHTLVLLPNILARISTAPQLGLAMTAHYPTITSATPTYPPALPADNLEAFAGNVVVFTLAAGDLDRLMKSAEIDLPGLASQQAVLRVMAHNPDSIWGIAKRADYTSGAAAPQGFVGFLMLNEQGLRQLVAGTFDASDPDNALLCAQNEKPAGIYLWAMWARNNLVAGIPLAFEKMFTPLYEDADLYARAVTQDGKRLLETMGFRPGAVFENLTNPGLHSLPRSGVHEPDVPLYDRYHGRSPERAVAVTVARSIEDLMRVIAIRSAVYIGEQECPYLEEFDGNDFSSTHLLGYIGNEPVACLRIRYFADFAKIERLAVRKEFRKQRITLQVVEAAIELCRAKGYQRLYGHAQKRLVKFWSQFGFTTFEGGQELVFSDFDYVEMQLTTERRPNAITIGIDPYLIIRPEGQWHRAGVLDQSRARAVTRPSIERGAA

Samples

Sample ID Description Type Environment
1 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
80 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
86 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
108 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
119 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
120 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
123 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
124 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
125 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
126 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
127 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
128 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
129 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
130 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
133 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
134 2902330777 Methylobacterium sp. 2A Isolate Unclassified
135 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
136 2928125067 Methylobacterium sp. 1973 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 0
Isolates 1.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.09
Nodule 0
Rhizoplane 0
Rhizosphere 84.55
Stem 0
Stem Tuber 0
Unclassified 13.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495648_0022486 3300046524 Bacteria 4339
2 JGI25406J46586_10001577 3300003203 Bacteria 10759
3 JGI25406J46586_10017811 3300003203 Bacteria 2930
4 Ga0070658_10005981 3300005327 Bacteria 9863
5 Ga0070658_10034109 3300005327 Bacteria 4094
6 Ga0070658_10062283 3300005327 Unclassified 3040
7 Ga0070670_100038625 3300005331 Bacteria 4105
8 Ga0070670_100059480 3300005331 Bacteria 3280
9 Ga0070670_100167714 3300005331 Bacteria 1904
10 Ga0068869_100023127 3300005334 Bacteria 4288
11 Ga0070680_100009988 3300005336 Bacteria 7311
12 Ga0070680_100026966 3300005336 Bacteria 4598
13 Ga0070680_100101764 3300005336 Bacteria 2385
14 Ga0070660_100035583 3300005339 Bacteria 3770
15 Ga0070660_100079742 3300005339 Unclassified 2569
16 Ga0070668_100085092 3300005347 Bacteria 2485
17 Ga0070659_100063945 3300005366 Bacteria 2911
18 Ga0070678_100012534 3300005456 Bacteria 5276
19 Ga0070662_100020934 3300005457 Bacteria 4461
20 Ga0070681_10036933 3300005458 Bacteria 4903
21 Ga0070681_10121700 3300005458 Bacteria 2544
22 Ga0070679_100002416 3300005530 Bacteria 16925
23 Ga0070679_100020191 3300005530 Bacteria 6494
24 Ga0070679_100035474 3300005530 Bacteria 4949
25 Ga0070697_100000649 3300005536 Bacteria 26259
26 Ga0068853_100241047 3300005539 Bacteria 1657
27 Ga0070695_100009264 3300005545 Bacteria 5853
28 Ga0070665_100010783 3300005548 Bacteria 9242
29 Ga0070665_100020321 3300005548 Bacteria 6669
30 Ga0070665_100038781 3300005548 Bacteria 4789
31 Ga0068855_100003281 3300005563 Bacteria 19815
32 Ga0068855_100037489 3300005563 Bacteria 5764
33 Ga0068855_100041277 3300005563 Bacteria 5469
34 Ga0068855_100061859 3300005563 Bacteria 4372
35 Ga0068855_100143152 3300005563 Bacteria 2723
36 Ga0068857_100025685 3300005577 Bacteria 5187
37 Ga0068857_100044062 3300005577 Bacteria 3957
38 Ga0068854_100073689 3300005578 Bacteria 2503
39 Ga0068856_100033817 3300005614 Bacteria 5006
40 Ga0068856_100147712 3300005614 Bacteria 2358
41 Ga0070702_100058818 3300005615 Bacteria 2228
42 Ga0068852_100309029 3300005616 Bacteria 1532
43 Ga0068859_100140116 3300005617 Unclassified 2492
44 Ga0068864_100063855 3300005618 Unclassified 3192
45 Ga0081539_10000316 3300005985 Bacteria 107841
46 Ga0081539_10001498 3300005985 Bacteria 39469
47 Ga0070717_10044478 3300006028 Bacteria 3626
48 Ga0075365_10003704 3300006038 Bacteria 7944
49 Ga0075368_10006058 3300006042 Bacteria 4201
50 Ga0075364_10013261 3300006051 Bacteria 5060
51 Ga0075364_10104059 3300006051 Unclassified 1891
52 Ga0070712_100116957 3300006175 Bacteria 2000
53 Ga0075367_10001181 3300006178 Bacteria 10954
54 Ga0075367_10039589 3300006178 Bacteria 2749
55 Ga0075428_100204722 3300006844 Bacteria 2133
56 Ga0075436_100014118 3300006914 Bacteria 5469
57 Ga0097620_100140110 3300006931 Unclassified 2492
58 Ga0099794_10019752 3300007265 Bacteria 3042
59 Ga0105240_10003137 3300009093 Bacteria 26028
60 Ga0105240_10010520 3300009093 Bacteria 12997
61 Ga0105240_10021471 3300009093 Bacteria 8586
62 Ga0105240_10090119 3300009093 Bacteria 3749
63 Ga0105245_10174609 3300009098 Unclassified 2048
64 Ga0105243_10251054 3300009148 Unclassified 1579
65 Ga0105241_10018268 3300009174 Bacteria 5156
66 Ga0105248_10373122 3300009177 Bacteria 1606
67 Ga0105237_10038664 3300009545 Bacteria 4818
68 Ga0105237_10089614 3300009545 Bacteria 3065
69 Ga0105238_10004226 3300009551 Bacteria 14265
70 Ga0105238_10006236 3300009551 Bacteria 11848
71 Ga0105238_10015486 3300009551 Bacteria 7718
72 Ga0105238_10032347 3300009551 Bacteria 5322
73 Ga0105238_10051039 3300009551 Unclassified 4161
74 Ga0105249_10123805 3300009553 Bacteria 2460
75 Ga0099796_10002501 3300010159 Bacteria 4047
76 Ga0105239_10002347 3300010375 Bacteria 24117
77 Ga0105239_10063930 3300010375 Unclassified 4040
78 Ga0105239_10079745 3300010375 Unclassified 3602
79 Ga0105239_10251117 3300010375 Viruses 1987
80 Ga0105239_10256518 3300010375 Unclassified 1965
81 Ga0105246_10039272 3300011119 Bacteria 3188
82 Ga0105246_10156218 3300011119 Bacteria 1733
83 Ga0157370_10024452 3300013104 Bacteria 5983
84 Ga0157369_10016005 3300013105 Bacteria 8440
85 Ga0157369_10051848 3300013105 Bacteria 4440
86 Ga0163163_10039340 3300014325 Plasmid 4615
87 Ga0163163_10079676 3300014325 Plasmid 3274
88 Ga0163163_10350290 3300014325 Bacteria 1533
89 Ga0209758_1006087 3300025297 Bacteria 8874
90 Ga0207682_10003367 3300025893 Bacteria 6964
91 Ga0207705_10015681 3300025909 Bacteria 5442
92 Ga0207705_10020863 3300025909 Bacteria 4677
93 Ga0207695_10003388 3300025913 Bacteria 22522
94 Ga0207695_10003562 3300025913 Bacteria 21808
95 Ga0207695_10004899 3300025913 Bacteria 18042
96 Ga0207693_10254633 3300025915 Bacteria 1377
97 Ga0207660_10073645 3300025917 Bacteria 2490
98 Ga0207657_10036436 3300025919 Bacteria 4403
99 Ga0207657_10065453 3300025919 Bacteria 3098
100 Ga0207652_10013716 3300025921 Bacteria 6553
101 Ga0207652_10014300 3300025921 Bacteria 6428
102 Ga0207652_10024184 3300025921 Bacteria 5038
103 Ga0207652_10063939 3300025921 Bacteria 3183
104 Ga0207652_10212963 3300025921 Bacteria 1740
105 Ga0207681_10080098 3300025923 Bacteria 2303
106 Ga0207694_10016728 3300025924 Bacteria 5544
107 Ga0207694_10023126 3300025924 Unclassified 4718
108 Ga0207694_10104936 3300025924 Unclassified 2243
109 Ga0207650_10046282 3300025925 Bacteria 3204
110 Ga0207650_10056743 3300025925 Unclassified 2911
111 Ga0207687_10063171 3300025927 Bacteria 2621
112 Ga0207706_10028016 3300025933 Bacteria 5033
113 Ga0207667_10023150 3300025949 Bacteria 6842
114 Ga0207667_10061737 3300025949 Bacteria 3920
115 Ga0207712_10086014 3300025961 Bacteria 2302
116 Ga0207702_10006527 3300026078 Bacteria 10036
117 Ga0207676_10012418 3300026095 Bacteria 6103
118 Ga0207674_10139183 3300026116 Bacteria 2388
119 Ga0207683_10050698 3300026121 Unclassified 3636
120 Ga0207683_10105478 3300026121 Unclassified 2519
121 Ga0265337_1001916 3300028556 Bacteria 9903
122 Ga0265338_10031222 3300028800 Bacteria 5226
123 Ga0265325_10003124 3300031241 Bacteria 10925
124 Ga0265340_10027656 3300031247 Bacteria 2858
125 Ga0307513_10075619 3300031456 Bacteria 3496
126 Ga0265313_10005346 3300031595 Bacteria 9481
127 Ga0265314_10136427 3300031711 Unclassified 1523
128 Ga0265342_10000546 3300031712 Bacteria 39732
129 Ga0265342_10062282 3300031712 Bacteria 2196
130 Ga0373936_0034172 3300035113 Bacteria 2019
131 Ga0373941_0001570 3300035115 Bacteria 4854
132 Ga0373943_0089281 3300035170 Unclassified 1594
133 Ga0373947_0191079 3300035725 Unclassified 1336
134 Ga0395901_0043099 3300038443 Bacteria 4681
135 Ga0436365_0040572 3300039437 Bacteria 2637
136 Ga0436365_0161226 3300039437 Bacteria 7955
137 Ga0436365_1287647 3300039437 Bacteria 8196
138 Ga0436365_1457162 3300039437 Unclassified 1904
139 Ga0436363_0817756 3300039450 Bacteria 2840
140 Ga0439443_001041 3300042003 Bacteria 2878
141 Ga0439460_0004983 3300042461 Bacteria 3245
142 Ga0495638_0005207 3300046460 Bacteria 9720
143 Ga0495638_0104504 3300046460 Bacteria 1689
144 Ga0495605_0023280 3300046474 Bacteria 3260
145 Ga0495586_0021168 3300046535 Bacteria 3465
146 Ga0495686_0182614 3300047472 Unclassified 1214
147 Ga0495602_0083273 3300048088 Unclassified 2681
148 Ga0496119_0053292 3300048922 Unclassified 2472
149 Ga0496121_0009529 3300048924 Bacteria 11125
150 Ga0496125_0000763 3300048928 Bacteria 52688
151 Ga0496125_0000796 3300048928 Bacteria 51436
152 Ga0501031_0004153 3300049568 Bacteria 9353
153 Ga0501032_0001122 3300049569 Bacteria 21398
154 Ga0501032_0072423 3300049569 Bacteria 2297
155 Ga0501033_0047791 3300049570 Unclassified 3181
156 Ga0501033_0082176 3300049570 Bacteria 2362
157 Ga0501033_0092359 3300049570 Bacteria 2213
158 Ga0501033_0108696 3300049570 Bacteria 2020
159 Ga0501034_0006799 3300049571 Bacteria 12233
160 Ga0501034_0126579 3300049571 Bacteria 2540
161 Ga0501034_0200300 3300049571 Bacteria 1955
162 Ga0501036_0002115 3300049572 Bacteria 15511
163 Ga0501036_0032366 3300049572 Bacteria 4418
164 Ga0501036_0035620 3300049572 Bacteria 4211
165 Ga0501038_0003855 3300049574 Bacteria 13937
166 Ga0501039_0036940 3300049575 Bacteria 3769
167 Ga0501046_0004697 3300049580 Bacteria 12327
168 Ga0501047_0012984 3300049581 Bacteria 7887
169 Ga0501047_0109582 3300049581 Unclassified 2644
170 Ga0501047_0221322 3300049581 Bacteria 1749
171 Ga0501048_0002146 3300049582 Bacteria 15050
172 Ga0501069_0000297 3300049585 Bacteria 22583
173 Ga0501070_0020870 3300049586 Bacteria 5495
174 Ga0501070_0079919 3300049586 Unclassified 2706
175 Ga0501070_0274744 3300049586 Bacteria 1375
176 Ga0501072_0003084 3300049588 Bacteria 12559
177 Ga0501073_0003346 3300049589 Bacteria 12049
178 Ga0501073_0060834 3300049589 Bacteria 2636
179 Ga0501074_0002525 3300049590 Bacteria 12773
180 Ga0501074_0177107 3300049590 Bacteria 1522
181 Ga0501075_0035857 3300049591 Bacteria 3700
182 Ga0501077_0005081 3300049593 Bacteria 7985
183 Ga0501079_0004371 3300049741 Bacteria 10474
184 Ga0501079_0007390 3300049741 Bacteria 8314
185 Ga0501080_0271516 3300049742 Unclassified 1543
186 Ga0501080_0427899 3300049742 Bacteria 1188
187 Ga0501081_0002570 3300049743 Bacteria 11464
188 Ga0501083_0003727 3300049744 Bacteria 10706
189 Ga0501083_0048207 3300049744 Bacteria 2876
190 Ga0501035_0009037 3300049822 Bacteria 9268
191 Ga0501035_0043697 3300049822 Bacteria 4037
192 Ga0501035_0065842 3300049822 Bacteria 3216
193 Ga0501035_0170138 3300049822 Bacteria 1883
194 Ga0501035_0175011 3300049822 Unclassified 1852
195 Ga0501044_0024800 3300049823 Bacteria 6362
196 Ga0501044_0098741 3300049823 Bacteria 2939
197 Ga0501044_0206721 3300049823 Bacteria 1919
198 nmdc:mga03683_19453_c1 3300050489 Bacteria 2592
199 nmdc:mga0k408_55874_c1 3300050493 Bacteria 2289
200 nmdc:mga06z11_10131_c1 3300050494 Bacteria 4001
201 nmdc:mga06z11_2982_c1 3300050494 Bacteria 6511
202 nmdc:mga08y16_31942_c1 3300050511 Bacteria 5536
203 nmdc:mga0rr50_172791_c1 3300050513 Bacteria 1762
204 nmdc:mga08x19_4_c1 3300050514 Bacteria 335979
205 Ga0500641_0013429 3300053096 Bacteria 3009
206 Ga0500556_0042369 3300053104 Bacteria 1610
207 Ga0500594_0017340 3300053118 Bacteria 1762
208 Ga0500595_000848 3300053119 Bacteria 17450
209 Ga0500595_021012 3300053119 Bacteria 2337
210 Ga0500642_0001874 3300053130 Bacteria 6076
211 Ga0500636_0029725 3300053177 Bacteria 3230
212 Ga0500645_003555 3300053730 Bacteria 6282
213 Ga0500645_010385 3300053730 Bacteria 3082
214 Ga0501084_0000033 3300054114 Bacteria 114778
215 Ga0501082_0001438 3300060353 Bacteria 20915
216 Ga0501082_0015299 3300060353 Bacteria 6605
217 2596373305 2595698237 Bacteria 6712432
218 2902333417 2902330777 Bacteria 6395352
219 2902406994 2902405164 Bacteria 6784948
220 2928127172 2928125067 Bacteria 5937560
221 Ga0495648_0022486
222 JGI25406J46586_10001577
223 JGI25406J46586_10017811
224 Ga0070658_10005981
225 Ga0070658_10034109
226 Ga0070658_10062283
227 Ga0070670_100038625
228 Ga0070670_100059480
229 Ga0070670_100167714
230 Ga0068869_100023127
231 Ga0070680_100009988
232 Ga0070680_100026966
233 Ga0070680_100101764
234 Ga0070660_100035583
235 Ga0070660_100079742
236 Ga0070668_100085092
237 Ga0070659_100063945
238 Ga0070678_100012534
239 Ga0070662_100020934
240 Ga0070681_10036933
241 Ga0070681_10121700
242 Ga0070679_100002416
243 Ga0070679_100020191
244 Ga0070679_100035474
245 Ga0070697_100000649
246 Ga0068853_100241047
247 Ga0070695_100009264
248 Ga0070665_100010783
249 Ga0070665_100020321
250 Ga0070665_100038781
251 Ga0068855_100003281
252 Ga0068855_100037489
253 Ga0068855_100041277
254 Ga0068855_100061859
255 Ga0068855_100143152
256 Ga0068857_100025685
257 Ga0068857_100044062
258 Ga0068854_100073689
259 Ga0068856_100033817
260 Ga0068856_100147712
261 Ga0070702_100058818
262 Ga0068852_100309029
263 Ga0068859_100140116
264 Ga0068864_100063855
265 Ga0081539_10000316
266 Ga0081539_10001498
267 Ga0070717_10044478
268 Ga0075365_10003704
269 Ga0075368_10006058
270 Ga0075364_10013261
271 Ga0075364_10104059
272 Ga0070712_100116957
273 Ga0075367_10001181
274 Ga0075367_10039589
275 Ga0075428_100204722
276 Ga0075436_100014118
277 Ga0097620_100140110
278 Ga0099794_10019752
279 Ga0105240_10003137
280 Ga0105240_10010520
281 Ga0105240_10021471
282 Ga0105240_10090119
283 Ga0105245_10174609
284 Ga0105243_10251054
285 Ga0105241_10018268
286 Ga0105248_10373122
287 Ga0105237_10038664
288 Ga0105237_10089614
289 Ga0105238_10004226
290 Ga0105238_10006236
291 Ga0105238_10015486
292 Ga0105238_10032347
293 Ga0105238_10051039
294 Ga0105249_10123805
295 Ga0099796_10002501
296 Ga0105239_10002347
297 Ga0105239_10063930
298 Ga0105239_10079745
299 Ga0105239_10251117
300 Ga0105239_10256518
301 Ga0105246_10039272
302 Ga0105246_10156218
303 Ga0157370_10024452
304 Ga0157369_10016005
305 Ga0157369_10051848
306 Ga0163163_10039340
307 Ga0163163_10079676
308 Ga0163163_10350290
309 Ga0209758_1006087
310 Ga0207682_10003367
311 Ga0207705_10015681
312 Ga0207705_10020863
313 Ga0207695_10003388
314 Ga0207695_10003562
315 Ga0207695_10004899
316 Ga0207693_10254633
317 Ga0207660_10073645
318 Ga0207657_10036436
319 Ga0207657_10065453
320 Ga0207652_10013716
321 Ga0207652_10014300
322 Ga0207652_10024184
323 Ga0207652_10063939
324 Ga0207652_10212963
325 Ga0207681_10080098
326 Ga0207694_10016728
327 Ga0207694_10023126
328 Ga0207694_10104936
329 Ga0207650_10046282
330 Ga0207650_10056743
331 Ga0207687_10063171
332 Ga0207706_10028016
333 Ga0207667_10023150
334 Ga0207667_10061737
335 Ga0207712_10086014
336 Ga0207702_10006527
337 Ga0207676_10012418
338 Ga0207674_10139183
339 Ga0207683_10050698
340 Ga0207683_10105478
341 Ga0265337_1001916
342 Ga0265338_10031222
343 Ga0265325_10003124
344 Ga0265340_10027656
345 Ga0307513_10075619
346 Ga0265313_10005346
347 Ga0265314_10136427
348 Ga0265342_10000546
349 Ga0265342_10062282
350 Ga0373936_0034172
351 Ga0373941_0001570
352 Ga0373943_0089281
353 Ga0373947_0191079
354 Ga0395901_0043099
355 Ga0436365_0040572
356 Ga0436365_0161226
357 Ga0436365_1287647
358 Ga0436365_1457162
359 Ga0436363_0817756
360 Ga0439443_001041
361 Ga0439460_0004983
362 Ga0495638_0005207
363 Ga0495638_0104504
364 Ga0495605_0023280
365 Ga0495586_0021168
366 Ga0495686_0182614
367 Ga0495602_0083273
368 Ga0496119_0053292
369 Ga0496121_0009529
370 Ga0496125_0000763
371 Ga0496125_0000796
372 Ga0501031_0004153
373 Ga0501032_0001122
374 Ga0501032_0072423
375 Ga0501033_0047791
376 Ga0501033_0082176
377 Ga0501033_0092359
378 Ga0501033_0108696
379 Ga0501034_0006799
380 Ga0501034_0126579
381 Ga0501034_0200300
382 Ga0501036_0002115
383 Ga0501036_0032366
384 Ga0501036_0035620
385 Ga0501038_0003855
386 Ga0501039_0036940
387 Ga0501046_0004697
388 Ga0501047_0012984
389 Ga0501047_0109582
390 Ga0501047_0221322
391 Ga0501048_0002146
392 Ga0501069_0000297
393 Ga0501070_0020870
394 Ga0501070_0079919
395 Ga0501070_0274744
396 Ga0501072_0003084
397 Ga0501073_0003346
398 Ga0501073_0060834
399 Ga0501074_0002525
400 Ga0501074_0177107
401 Ga0501075_0035857
402 Ga0501077_0005081
403 Ga0501079_0004371
404 Ga0501079_0007390
405 Ga0501080_0271516
406 Ga0501080_0427899
407 Ga0501081_0002570
408 Ga0501083_0003727
409 Ga0501083_0048207
410 Ga0501035_0009037
411 Ga0501035_0043697
412 Ga0501035_0065842
413 Ga0501035_0170138
414 Ga0501035_0175011
415 Ga0501044_0024800
416 Ga0501044_0098741
417 Ga0501044_0206721
418 nmdc:mga03683_19453_c1
419 nmdc:mga0k408_55874_c1
420 nmdc:mga06z11_10131_c1
421 nmdc:mga06z11_2982_c1
422 nmdc:mga08y16_31942_c1
423 nmdc:mga0rr50_172791_c1
424 nmdc:mga08x19_4_c1
425 Ga0500641_0013429
426 Ga0500556_0042369
427 Ga0500594_0017340
428 Ga0500595_000848
429 Ga0500595_021012
430 Ga0500642_0001874
431 Ga0500636_0029725
432 Ga0500645_003555
433 Ga0500645_010385
434 Ga0501084_0000033
435 Ga0501082_0001438
436 Ga0501082_0015299
437 2596373305
438 2902333417
439 2902406994
440 2928127172

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13673

Acetyltransf_10

Acetyltransferase (GNAT) domain

279

387

0.86

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

257

364

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jph-assembly1.cif.gz_B structure of a gnat acetyltransferase sacol1063 from staphylococcus aureus in complex with coa 0.9388 233 373
1q2y-assembly1.cif.gz_A crystal structure of the protein yjcf from bacillus subtilis: a member of the gcn5-related n-acetyltransferase superfamily fold 0.9138 233 369
3efa-assembly1.cif.gz_A-2 crystal structure of putative n-acetyltransferase from lactobacillus plantarum 0.9116 230 371
5jph-assembly1.cif.gz_B structure of a gnat acetyltransferase sacol1063 from staphylococcus aureus in complex with coa 0.9077 233 373
1q2y-assembly1.cif.gz_A crystal structure of the protein yjcf from bacillus subtilis: a member of the gcn5-related n-acetyltransferase superfamily fold 0.8834 233 369
ID Description Score Start End Superfamily
1q2yA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9138 233 369 3.40.630.30
af_Q84NP5_560_706_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9078 280 353 3.40.630.30
3efaA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9043 232 368 3.40.630.30
af_Q17765_2_142_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8999 233 368 3.40.630.30
af_Q10081_4_149_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8984 233 371 3.40.630.30
ID Description Score Start End GO Terms
AF-A0A165WYY3-F1-model_v4 Putative N-acetyltransferase YjcF (EC 2.3.1.-) 0.9636 233 371 GO:0016747
AF-A0A2V3WE24-F1-model_v4 Putative GNAT family N-acyltransferase 0.963 230 373 GO:0004343
AF-A0A1G6KGH2-F1-model_v4 N-acetyltransferase domain-containing protein 0.9627 233 371 GO:0004343
AF-A0A4Q3PZV9-F1-model_v4 deleted 0.9624 230 321
AF-A0A7X8PQ80-F1-model_v4 GNAT family N-acetyltransferase 0.9606 230 371 GO:0004343

Map