F332394

General Info

Members Datasets Scaffolds Average Seq Length
220 176 440 407

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10035175|Ga0265320_100351752
Length 449
Sequence MGRMVYGLAMLDPRHVTEHLDEVRAAIGRRSDAFSSVLDQIASLALEKRASLTELERERASKNEASAAMAKIADKKSEEFTAKRKELGAVGDRIKELEGKEKALDAQLEELLLGVPNIPDASVPDGKDESLNRVAKVWGEKPIIAFTPKDHHDLGVALDILDFDRGAKISGARFTILKGMGARLERGLIQLMMDLHADAHGYTEVWPPALVLPRAMRGTGQLPKFESDMFKTERRSAAGSESDDAEKLLYLAPTAEVPVTNMHADEIFEPGQLPRAYCAYTACFRAEAGSYGRDTRGLIRQHQFDKVELVRFCAADQGLAQLEILRGHAERVLEVLGLHYRTVELCAGDMGFGAKKCYDLEVWLPGQNAYREISSCSWFGDFQARRAKIRYRAEEKGKPQLAHTLNGSGLAIGRTLVAILEQGQQADGSVVIPEALREYVGGAERITRS

Samples

Sample ID Description Type Environment
1 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
19 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
20 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
57 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
58 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
59 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
60 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
61 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
62 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
71 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
72 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
73 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
74 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
75 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
76 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
77 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
102 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
103 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
104 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
105 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
106 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
107 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
108 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
109 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
110 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
111 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
112 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
113 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
114 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
115 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
116 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
117 2671180694 Paenibacillus sp. A3 Isolate Unclassified
118 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
119 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
120 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
121 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
122 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
123 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
124 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
125 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
126 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
127 2818991459 Paenibacillus sp. 597 Isolate Unclassified
128 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
129 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
130 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
131 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
132 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
133 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
134 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
135 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
136 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
137 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
138 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
139 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
140 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
141 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
142 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
143 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
144 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
145 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
146 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
147 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
148 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
149 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
150 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
151 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
152 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
153 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
154 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
155 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
156 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
157 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
158 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
159 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
160 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
161 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
162 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
163 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
164 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
165 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
166 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
167 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
168 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
169 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
170 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
171 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
172 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
173 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
174 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
175 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
176 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 65
Metatranscriptomes 0
Isolates 35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.36
Nodule 0
Rhizoplane 0.45
Rhizosphere 63.64
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265320_10035175 3300031240 Bacteria 2541
2 JGI25151J46595_10006259 3300003187 Bacteria 6010
3 rootH2_10010724 3300003320 Bacteria 24933
4 rootH2_10145312 3300003320 Bacteria 2731
5 rootH1_10130602 3300003323 Bacteria 6761
6 Ga0055538_1000438 3300003751 Bacteria 16029
7 Ga0055538_1000505 3300003751 Bacteria 14063
8 Ga0055535_1002346 3300003761 Bacteria 6837
9 Ga0055536_1009591 3300003781 Bacteria 3975
10 Ga0055541_1000295 3300003841 Bacteria 16798
11 Ga0055541_1000703 3300003841 Bacteria 8634
12 Ga0070682_100001833 3300005337 Bacteria 11843
13 Ga0070682_100007607 3300005337 Bacteria 6104
14 Ga0070682_100045019 3300005337 Bacteria 2734
15 Ga0070714_100038456 3300005435 Bacteria 4022
16 Ga0070685_10020461 3300005466 Bacteria 3581
17 Ga0070707_100233720 3300005468 Bacteria 1789
18 Ga0070698_100269401 3300005471 Bacteria 1635
19 Ga0068855_100000008 3300005563 Bacteria 269155
20 Ga0068855_100010226 3300005563 Bacteria 11309
21 Ga0068859_100397204 3300005617 Bacteria 1475
22 Ga0068863_100143749 3300005841 Bacteria 2281
23 Ga0070717_10222872 3300006028 Bacteria 1658
24 Ga0075366_10041425 3300006195 Bacteria 2727
25 Ga0105251_10029469 3300009011 Bacteria 2765
26 Ga0105244_10073877 3300009036 Bacteria 1697
27 Ga0105240_10000494 3300009093 Bacteria 72657
28 Ga0111539_10012835 3300009094 Bacteria 10485
29 Ga0105245_10004013 3300009098 Bacteria 13086
30 Ga0105241_10005509 3300009174 Bacteria 9365
31 Ga0105246_10000167 3300011119 Bacteria 31688
32 Ga0157376_10250165 3300014969 Bacteria 1655
33 Ga0209784_100081 3300025224 Bacteria 135445
34 Ga0209784_100266 3300025224 Bacteria 31086
35 Ga0209784_101408 3300025224 Bacteria 3264
36 Ga0209566_100098 3300025225 Bacteria 134926
37 Ga0209566_100158 3300025225 Bacteria 76076
38 Ga0209566_100762 3300025225 Bacteria 17387
39 Ga0209258_103476 3300025242 Bacteria 3377
40 Ga0209675_1007349 3300025291 Bacteria 4239
41 Ga0209676_1002857 3300025292 Bacteria 11397
42 Ga0209676_1004561 3300025292 Bacteria 7667
43 Ga0209025_1000466 3300025294 Bacteria 79039
44 Ga0209025_1005071 3300025294 Bacteria 10966
45 Ga0209025_1013840 3300025294 Bacteria 5029
46 Ga0209025_1024327 3300025294 Bacteria 3129
47 Ga0209025_1025575 3300025294 Bacteria 2998
48 Ga0207695_10000821 3300025913 Bacteria 57510
49 Ga0207687_10004539 3300025927 Bacteria 9236
50 Ga0207667_10000929 3300025949 Bacteria 37359
51 Ga0207641_10151146 3300026088 Bacteria 2103
52 Ga0207428_10048459 3300027907 Bacteria 3408
53 Ga0265337_1003110 3300028556 Bacteria 7317
54 Ga0265324_10000010 3300029957 Bacteria 252917
55 Ga0307511_10090055 3300030521 Bacteria 2086
56 Ga0265332_10019471 3300031238 Bacteria 2996
57 Ga0265332_10042810 3300031238 Bacteria 1956
58 Ga0265320_10000971 3300031240 Bacteria 21352
59 Ga0265339_10000919 3300031249 Bacteria 22657
60 Ga0265316_10002757 3300031344 Bacteria 17999
61 Ga0307513_10069809 3300031456 Bacteria 3676
62 Ga0307508_10001504 3300031616 Bacteria 26047
63 Ga0307508_10027966 3300031616 Bacteria 5102
64 Ga0307508_10038484 3300031616 Bacteria 4300
65 Ga0265314_10000003 3300031711 Bacteria 1653386
66 Ga0265314_10006387 3300031711 Bacteria 10445
67 Ga0265314_10018157 3300031711 Bacteria 5494
68 Ga0265314_10021285 3300031711 Bacteria 4991
69 Ga0316576_10002722 3300031727 Bacteria 10120
70 Ga0316576_10017819 3300031727 Bacteria 4836
71 Ga0316578_10001548 3300031728 Bacteria 9463
72 Ga0307516_10001142 3300031730 Bacteria 37064
73 Ga0307406_10034962 3300031901 Bacteria 3086
74 Ga0316574_0023670 3300035398 Bacteria 3669
75 Ga0316574_0040527 3300035398 Unclassified 2869
76 Ga0373927_0023087 3300035695 Bacteria 4074
77 Ga0395899_0016429 3300037312 Bacteria 5641
78 Ga0395899_0078049 3300037312 Bacteria 2414
79 Ga0395899_0150773 3300037312 Bacteria 1648
80 Ga0395900_0146715 3300037418 Bacteria 2412
81 Ga0395898_0081056 3300037466 Unclassified 3130
82 Ga0436361_0656040 3300039447 Bacteria 1908
83 Ga0451849_0629272 3300041505 Bacteria 5208
84 Ga0451853_2003435 3300041512 Bacteria 11125
85 Ga0439433_0003719 3300041999 Bacteria 3277
86 Ga0439449_0000035 3300042007 Bacteria 39811
87 Ga0439449_0008332 3300042007 Bacteria 3943
88 Ga0439462_0000792 3300042015 Bacteria 6572
89 Ga0466972_0042831 3300044658 Bacteria 2200
90 Ga0453683_0002460 3300044673 Bacteria 14327
91 Ga0466965_0030906 3300044683 Bacteria 2610
92 Ga0466961_0042308 3300044693 Bacteria 2920
93 Ga0453684_0223206 3300044712 Bacteria 2181
94 Ga0466968_0005618 3300044735 Bacteria 4697
95 Ga0466959_0070648 3300045049 Bacteria 2529
96 Ga0451576_0302773 3300045051 Bacteria 1672
97 Ga0495670_0081506 3300046691 Bacteria 1649
98 Ga0496116_0001979 3300048919 Bacteria 22071
99 Ga0496116_0045540 3300048919 Bacteria 2968
100 Ga0496116_0100874 3300048919 Bacteria 1725
101 Ga0496117_0020367 3300048920 Bacteria 5408
102 Ga0496118_0025930 3300048921 Bacteria 5010
103 Ga0496121_0028668 3300048924 Bacteria 5176
104 Ga0496122_0013095 3300048925 Bacteria 8164
105 Ga0496122_0079226 3300048925 Bacteria 2297
106 Ga0496122_0082857 3300048925 Bacteria 2226
107 Ga0496124_0021364 3300048927 Bacteria 5966
108 Ga0496124_0051083 3300048927 Bacteria 3519
109 Ga0496125_0010452 3300048928 Bacteria 9387
110 Ga0496126_0010768 3300048929 Bacteria 9550
111 Ga0501037_0061466 3300049573 Bacteria 2739
112 Ga0501038_0009906 3300049574 Bacteria 8724
113 Ga0501047_0009479 3300049581 Bacteria 9199
114 Ga0501047_0018380 3300049581 Bacteria 6702
115 Ga0501047_0096691 3300049581 Bacteria 2832
116 Ga0501067_0010068 3300049583 Bacteria 5231
117 Ga0501068_0000044 3300049584 Bacteria 47748
118 Ga0501069_0010890 3300049585 Bacteria 4818
119 Ga0501072_0000037 3300049588 Bacteria 115310
120 Ga0501073_0051488 3300049589 Bacteria 2884
121 Ga0501073_0138235 3300049589 Bacteria 1688
122 Ga0501074_0014174 3300049590 Bacteria 5796
123 Ga0501076_0020856 3300049592 Bacteria 5018
124 Ga0501077_0002313 3300049593 Bacteria 11478
125 Ga0501079_0005344 3300049741 Bacteria 9561
126 Ga0501080_0005673 3300049742 Bacteria 11158
127 Ga0501080_0010910 3300049742 Bacteria 8312
128 Ga0501080_0111837 3300049742 Bacteria 2531
129 Ga0501083_0015014 3300049744 Bacteria 5422
130 Ga0501083_0023377 3300049744 Bacteria 4287
131 Ga0501044_0028631 3300049823 Bacteria 5879
132 nmdc:mga09592_51281_c1 3300050508 Bacteria 3481
133 nmdc:mga08y16_24358_c1 3300050511 Bacteria 6388
134 nmdc:mga0rr50_46082_c1 3300050513 Bacteria 3209
135 Ga0500643_002522 3300053087 Bacteria 9374
136 Ga0500616_0027265 3300053153 Bacteria 3155
137 Ga0501084_0000068 3300054114 Bacteria 78853
138 Ga0501084_0000657 3300054114 Bacteria 26380
139 Ga0501084_0016580 3300054114 Bacteria 6118
140 Ga0501082_0000641 3300060353 Bacteria 30911
141 Ga0501082_0044387 3300060353 Bacteria 3834
142 Ga0501082_0144180 3300060353 Bacteria 2067
143 Ga0530510_0022534 3300061734 Bacteria 4488
144 2511175941 2510917027 Bacteria 5287437
145 2512640388 2512564013 Bacteria 6286191
146 2524191887 2524023129 Bacteria 6762600
147 2550903276 2548877040 Bacteria 7507281
148 2563930383 2563366752 Bacteria 4961801
149 2571530207 2571042143 Bacteria 6986194
150 2573039925 2571042588 Bacteria 5045676
151 2578334593 2576861424 Bacteria 5270569
152 2580934306 2579778775 Bacteria 5360914
153 2587743531 2585428059 Bacteria 8696589
154 2595320253 2593339198 Bacteria 7267884
155 2601636967 2600255286 Bacteria 5390125
156 2621272620 2619619294 Bacteria 5575484
157 2643738989 2643221543 Bacteria 6628015
158 2644423825 2643221676 Bacteria 8119172
159 2673821924 2671180694 Bacteria 7506943
160 2723601439 2721755693 Bacteria 6126117
161 2728529670 2728368933 Bacteria 7044283
162 2730137562 2728369359 Bacteria 5621728
163 2738841039 2738541299 Bacteria 4020721
164 2745169620 2744054657 Bacteria 5016802
165 2753813296 2751185905 Bacteria 6142767
166 2791211320 2788500588 Bacteria 4584915
167 2802440765 2802428803 Bacteria 5806948
168 2819629734 2818991451 Bacteria 4697364
169 2819675724 2818991459 Bacteria 8736032
170 2821118408 2821111986 Bacteria 6894338
171 2852677349 2852673933 Bacteria 3347676
172 2857472130 2857465823 Bacteria 6772595
173 2857597401 2857591370 Bacteria 6569758
174 2864739263 2864733723 Bacteria 6770668
175 2881639775 2881636855 Bacteria 5205297
176 2885530009 2885526491 Bacteria 7164189
177 2888579019 2888578766 Bacteria 6743310
178 2889042535 2889042446 Bacteria 7618936
179 2889277534 2889276214 Bacteria 5979355
180 2904116681 2904113452 Bacteria 7796941
181 2904167322 2904162308 Bacteria 7086713
182 2904497049 2904490793 Bacteria 7046938
183 2904601253 2904595352 Bacteria 6124848
184 2904611610 2904606771 Bacteria 4684500
185 2904755531 2904755435 Bacteria 7986759
186 2907205084 2907202186 Bacteria 6632024
187 2919166290 2919160200 Bacteria 6929020
188 2919430689 2919425241 Bacteria 8055701
189 2928515447 2928510474 Bacteria 4815308
190 2929206922 2929206907 Bacteria 5918291
191 2929298129 2929297113 Bacteria 3141306
192 2931385961 2931384279 Bacteria 7299545
193 2938653947 2938649242 Bacteria 7118381
194 2939595453 2939593269 Bacteria 4798695
195 2939597821 2939593269 Bacteria 4798695
196 2939685247 2939679117 Bacteria 6921672
197 2939706988 2939702853 Bacteria 5139229
198 2945995433 2945991243 Bacteria 7008369
199 2946058139 2946053406 Bacteria 6978655
200 2968562935 2968558590 Bacteria 6956864
201 2971407563 2971403814 Bacteria 7370929
202 2971416715 2971410472 Bacteria 8311090
203 2971513939 2971511577 Bacteria 5404012
204 2980179621 2980176882 Bacteria 5397533
205 2980187763 2980182181 Bacteria 9454109
206 2988230387 2988225383 Bacteria 7221625
207 2996637448 2996632988 Bacteria 6921523
208 2996707465 2996706504 Bacteria 5757485
209 3001271993 3001267043 Bacteria 4823521
210 3001275813 3001272096 Bacteria 4729684
211 3006993336 3006988479 Bacteria 4767936
212 648168024 648028048 Bacteria 5394884
213 8002318121 8002317523 Bacteria 8051857
214 8007372295 8007371054 Bacteria 4849201
215 8046992244 8046991243 Bacteria 8497463
216 8054469434 8054465665 Bacteria 7323556
217 8055531814 8055531788 Bacteria 5249694
218 8055537014 8055531788 Bacteria 5249694
219 8056535949 8056533031 Bacteria 8964429
220 8057982127 8057977335 Bacteria 5694872
221 Ga0265320_10035175
222 JGI25151J46595_10006259
223 rootH2_10010724
224 rootH2_10145312
225 rootH1_10130602
226 Ga0055538_1000438
227 Ga0055538_1000505
228 Ga0055535_1002346
229 Ga0055536_1009591
230 Ga0055541_1000295
231 Ga0055541_1000703
232 Ga0070682_100001833
233 Ga0070682_100007607
234 Ga0070682_100045019
235 Ga0070714_100038456
236 Ga0070685_10020461
237 Ga0070707_100233720
238 Ga0070698_100269401
239 Ga0068855_100000008
240 Ga0068855_100010226
241 Ga0068859_100397204
242 Ga0068863_100143749
243 Ga0070717_10222872
244 Ga0075366_10041425
245 Ga0105251_10029469
246 Ga0105244_10073877
247 Ga0105240_10000494
248 Ga0111539_10012835
249 Ga0105245_10004013
250 Ga0105241_10005509
251 Ga0105246_10000167
252 Ga0157376_10250165
253 Ga0209784_100081
254 Ga0209784_100266
255 Ga0209784_101408
256 Ga0209566_100098
257 Ga0209566_100158
258 Ga0209566_100762
259 Ga0209258_103476
260 Ga0209675_1007349
261 Ga0209676_1002857
262 Ga0209676_1004561
263 Ga0209025_1000466
264 Ga0209025_1005071
265 Ga0209025_1013840
266 Ga0209025_1024327
267 Ga0209025_1025575
268 Ga0207695_10000821
269 Ga0207687_10004539
270 Ga0207667_10000929
271 Ga0207641_10151146
272 Ga0207428_10048459
273 Ga0265337_1003110
274 Ga0265324_10000010
275 Ga0307511_10090055
276 Ga0265332_10019471
277 Ga0265332_10042810
278 Ga0265320_10000971
279 Ga0265339_10000919
280 Ga0265316_10002757
281 Ga0307513_10069809
282 Ga0307508_10001504
283 Ga0307508_10027966
284 Ga0307508_10038484
285 Ga0265314_10000003
286 Ga0265314_10006387
287 Ga0265314_10018157
288 Ga0265314_10021285
289 Ga0316576_10002722
290 Ga0316576_10017819
291 Ga0316578_10001548
292 Ga0307516_10001142
293 Ga0307406_10034962
294 Ga0316574_0023670
295 Ga0316574_0040527
296 Ga0373927_0023087
297 Ga0395899_0016429
298 Ga0395899_0078049
299 Ga0395899_0150773
300 Ga0395900_0146715
301 Ga0395898_0081056
302 Ga0436361_0656040
303 Ga0451849_0629272
304 Ga0451853_2003435
305 Ga0439433_0003719
306 Ga0439449_0000035
307 Ga0439449_0008332
308 Ga0439462_0000792
309 Ga0466972_0042831
310 Ga0453683_0002460
311 Ga0466965_0030906
312 Ga0466961_0042308
313 Ga0453684_0223206
314 Ga0466968_0005618
315 Ga0466959_0070648
316 Ga0451576_0302773
317 Ga0495670_0081506
318 Ga0496116_0001979
319 Ga0496116_0045540
320 Ga0496116_0100874
321 Ga0496117_0020367
322 Ga0496118_0025930
323 Ga0496121_0028668
324 Ga0496122_0013095
325 Ga0496122_0079226
326 Ga0496122_0082857
327 Ga0496124_0021364
328 Ga0496124_0051083
329 Ga0496125_0010452
330 Ga0496126_0010768
331 Ga0501037_0061466
332 Ga0501038_0009906
333 Ga0501047_0009479
334 Ga0501047_0018380
335 Ga0501047_0096691
336 Ga0501067_0010068
337 Ga0501068_0000044
338 Ga0501069_0010890
339 Ga0501072_0000037
340 Ga0501073_0051488
341 Ga0501073_0138235
342 Ga0501074_0014174
343 Ga0501076_0020856
344 Ga0501077_0002313
345 Ga0501079_0005344
346 Ga0501080_0005673
347 Ga0501080_0010910
348 Ga0501080_0111837
349 Ga0501083_0015014
350 Ga0501083_0023377
351 Ga0501044_0028631
352 nmdc:mga09592_51281_c1
353 nmdc:mga08y16_24358_c1
354 nmdc:mga0rr50_46082_c1
355 Ga0500643_002522
356 Ga0500616_0027265
357 Ga0501084_0000068
358 Ga0501084_0000657
359 Ga0501084_0016580
360 Ga0501082_0000641
361 Ga0501082_0044387
362 Ga0501082_0144180
363 Ga0530510_0022534
364 2511175941
365 2512640388
366 2524191887
367 2550903276
368 2563930383
369 2571530207
370 2573039925
371 2578334593
372 2580934306
373 2587743531
374 2595320253
375 2601636967
376 2621272620
377 2643738989
378 2644423825
379 2673821924
380 2723601439
381 2728529670
382 2730137562
383 2738841039
384 2745169620
385 2753813296
386 2791211320
387 2802440765
388 2819629734
389 2819675724
390 2821118408
391 2852677349
392 2857472130
393 2857597401
394 2864739263
395 2881639775
396 2885530009
397 2888579019
398 2889042535
399 2889277534
400 2904116681
401 2904167322
402 2904497049
403 2904601253
404 2904611610
405 2904755531
406 2907205084
407 2919166290
408 2919430689
409 2928515447
410 2929206922
411 2929298129
412 2931385961
413 2938653947
414 2939595453
415 2939597821
416 2939685247
417 2939706988
418 2945995433
419 2946058139
420 2968562935
421 2971407563
422 2971416715
423 2971513939
424 2980179621
425 2980187763
426 2988230387
427 2996637448
428 2996707465
429 3001271993
430 3001275813
431 3006993336
432 648168024
433 8002318121
434 8007372295
435 8046992244
436 8054469434
437 8055531814
438 8055537014
439 8056535949
440 8057982127

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02403

Seryl_tRNA_N

Seryl-tRNA synthetase N-terminal domain

10

119

0.99

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

230

423

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ydf-assembly1.cif.gz_A crystal structure of human sars2 catalytic domain 0.9422 58 363
7u2b-assembly1.cif.gz_A cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(gcu-tl) 0.9408 59 363
8ffy-assembly1.cif.gz_A cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(uga-tl) 0.9399 60 363
7ydf-assembly1.cif.gz_A crystal structure of human sars2 catalytic domain 0.9277 58 363
7u2b-assembly1.cif.gz_A cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(gcu-tl) 0.895 59 363
ID Description Score Start End Superfamily
2dq3B02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9772 44 363 3.30.930.10
2dq3B02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9711 44 363 3.30.930.10
2dq0B02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9646 44 363 3.30.930.10
af_P9WFT7_105_418_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9639 45 363 3.30.930.10
af_I1JVB5_172_505_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9636 44 363 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A3B9M1A0-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9978 213 361 GO:0004828
GO:0005524
GO:0005737
GO:0006434
GO:0016740
AF-A0A2T4S6I2-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9924 244 363 GO:0004828
GO:0005524
GO:0005737
GO:0006434
GO:0016740
AF-A0A496NLZ3-F1-model_v4 deleted 0.9917 236 363
AF-A0A257WTY7-F1-model_v4 deleted 0.991 226 363
AF-A0A7V5GYJ3-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9908 217 359 GO:0004828
GO:0005524
GO:0005737
GO:0006434

Map