F332264
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 220 | 125 | 220 | 494 |
Family's Representative Sequence
| Representative Sequence | 3300014325|Ga0163163_10000792|Ga0163163_1000079219 |
| Length | 548 |
| Sequence | VSLRAPRVISESKHPPVIWITNGGSLKKISHAAAQRRNEESFAVAPLRRCVRNLSVNHKHSARICVPVCEKDLDALWNTCERAVEWADVIELRLDCLDEIPDNFKEITRPLILTFRPSEEGGHRELTREERRRFWSSAPRGETVWWDVEGDLVHDLTPDWSRVIVSHHDFSGVPKDLEQIYERLAHTPAAVIKIAVQTNDILDCLPIFQLLERARSEGREIIAIAMGNAGIATRVLGPSRGSFLTYGALDDARTTAPGQVNARKLRSLFHLDTIDDETMICGLVGMPVMHSVSPRIHNAAFLEQKLNGVYLPFEVHDVIQFFKRMVHPRTRELNWNLRGLSITAPHKQTVMECLDWIDADAKDIGAVNTVVVEGDRLLGYNTDAAGFIDPLLKRLTTLRDAKVAIIGAGGAARAAIWALQRQNANVTLFARNVPKAQALADLFRISCMSLHEASFAGYDLVINTTPVGSGAYINQSPATREQLSGSRCVYDLIYNPRETLLLREAHKAGCETLGGLEMLVAQAGLQFELWTGRKFSHEFSRMNTDFMY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886011 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 2 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 6 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 10 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 12 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 23 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 29 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 30 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 36 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 37 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 38 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 39 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 40 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 41 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 42 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 43 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 46 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 97 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 101 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 102 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 103 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 104 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 105 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 106 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 107 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 108 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 109 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 110 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 111 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 116 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 118 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 119 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 120 | 3300049673 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought | Metagenome | Rhizosphere |
| 121 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 122 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.91 |
| Rhizosphere | 98.64 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.45 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | MRS1b_contig_6134487 | 2162886011 | Bacteria | 2913 |
| 2 | JGI24751J29686_10000099 | 3300002459 | Bacteria | 47837 |
| 3 | JGI25406J46586_10039546 | 3300003203 | Unclassified | 1680 |
| 4 | Ga0065714_10064424 | 3300005288 | Bacteria | 236118 |
| 5 | Ga0065712_10000117 | 3300005290 | Bacteria | 235194 |
| 6 | Ga0065715_10095143 | 3300005293 | Bacteria | 4154 |
| 7 | Ga0065707_10002183 | 3300005295 | Bacteria | 5827 |
| 8 | Ga0070670_100000297 | 3300005331 | Bacteria | 43678 |
| 9 | Ga0070670_100076596 | 3300005331 | Bacteria | 2874 |
| 10 | Ga0068869_100003815 | 3300005334 | Bacteria | 9293 |
| 11 | Ga0068869_100007547 | 3300005334 | Bacteria | 6961 |
| 12 | Ga0068869_100108384 | 3300005334 | Unclassified | 2110 |
| 13 | Ga0070682_100000548 | 3300005337 | Bacteria | 23320 |
| 14 | Ga0068868_100119704 | 3300005338 | Unclassified | 2147 |
| 15 | Ga0070689_100000425 | 3300005340 | Bacteria | 24906 |
| 16 | Ga0070689_100094296 | 3300005340 | Bacteria | 2363 |
| 17 | Ga0070689_100155370 | 3300005340 | Bacteria | 1847 |
| 18 | Ga0070692_10022467 | 3300005345 | Bacteria | 3081 |
| 19 | Ga0070692_10060413 | 3300005345 | Bacteria | 1995 |
| 20 | Ga0070669_100044239 | 3300005353 | Bacteria | 3244 |
| 21 | Ga0070671_100010063 | 3300005355 | Bacteria | 7596 |
| 22 | Ga0070671_100069458 | 3300005355 | Bacteria | 2938 |
| 23 | Ga0070659_100110855 | 3300005366 | Bacteria | 2215 |
| 24 | Ga0070703_10000171 | 3300005406 | Bacteria | 32050 |
| 25 | Ga0070705_100005473 | 3300005440 | Bacteria | 6190 |
| 26 | Ga0070700_100000087 | 3300005441 | Bacteria | 62003 |
| 27 | Ga0070700_100071700 | 3300005441 | Bacteria | 2212 |
| 28 | Ga0070694_100001072 | 3300005444 | Bacteria | 15653 |
| 29 | Ga0070694_100041266 | 3300005444 | Unclassified | 3077 |
| 30 | Ga0070708_100000281 | 3300005445 | Bacteria | 38291 |
| 31 | Ga0070708_100049330 | 3300005445 | Unclassified | 3724 |
| 32 | Ga0068867_100152513 | 3300005459 | Bacteria | 1816 |
| 33 | Ga0070685_10058451 | 3300005466 | Bacteria | 2248 |
| 34 | Ga0070706_100000146 | 3300005467 | Bacteria | 89818 |
| 35 | Ga0070706_100001677 | 3300005467 | Bacteria | 23063 |
| 36 | Ga0070707_100008484 | 3300005468 | Bacteria | 9545 |
| 37 | Ga0070707_100022965 | 3300005468 | Bacteria | 5899 |
| 38 | Ga0070707_100028632 | 3300005468 | Bacteria | 5303 |
| 39 | Ga0070698_100001335 | 3300005471 | Bacteria | 27442 |
| 40 | Ga0070698_100008222 | 3300005471 | Bacteria | 11286 |
| 41 | Ga0070698_100009193 | 3300005471 | Bacteria | 10606 |
| 42 | Ga0070698_100011852 | 3300005471 | Bacteria | 9249 |
| 43 | Ga0070698_100047664 | 3300005471 | Unclassified | 4380 |
| 44 | Ga0070698_100074683 | 3300005471 | Unclassified | 3395 |
| 45 | Ga0070698_100207440 | 3300005471 | Bacteria | 1895 |
| 46 | Ga0070699_100001043 | 3300005518 | Bacteria | 25801 |
| 47 | Ga0070699_100002373 | 3300005518 | Bacteria | 16893 |
| 48 | Ga0070699_100032549 | 3300005518 | Unclassified | 4503 |
| 49 | Ga0070699_100036991 | 3300005518 | Unclassified | 4223 |
| 50 | Ga0070697_100000135 | 3300005536 | Bacteria | 59315 |
| 51 | Ga0070697_100057883 | 3300005536 | Bacteria | 3153 |
| 52 | Ga0070697_100092773 | 3300005536 | Unclassified | 2499 |
| 53 | Ga0068853_100048085 | 3300005539 | Bacteria | 3662 |
| 54 | Ga0070695_100020450 | 3300005545 | Unclassified | 4042 |
| 55 | Ga0070695_100095171 | 3300005545 | Bacteria | 1996 |
| 56 | Ga0070696_100022863 | 3300005546 | Bacteria | 4251 |
| 57 | Ga0070693_100005553 | 3300005547 | Bacteria | 6067 |
| 58 | Ga0070693_100024553 | 3300005547 | Bacteria | 3233 |
| 59 | Ga0070665_100015048 | 3300005548 | Bacteria | 7766 |
| 60 | Ga0070702_100012847 | 3300005615 | Bacteria | 4214 |
| 61 | Ga0068859_100007296 | 3300005617 | Bacteria | 11215 |
| 62 | Ga0068859_100023588 | 3300005617 | Bacteria | 6175 |
| 63 | Ga0068859_100031803 | 3300005617 | Bacteria | 5300 |
| 64 | Ga0068859_100096958 | 3300005617 | Bacteria | 3001 |
| 65 | Ga0068859_100115348 | 3300005617 | Unclassified | 2751 |
| 66 | Ga0068859_100149276 | 3300005617 | Bacteria | 2413 |
| 67 | Ga0068859_100175531 | 3300005617 | Bacteria | 2224 |
| 68 | Ga0068859_100199017 | 3300005617 | Bacteria | 2088 |
| 69 | Ga0068859_100224531 | 3300005617 | Bacteria | 1966 |
| 70 | Ga0068859_100227236 | 3300005617 | Bacteria | 1954 |
| 71 | Ga0068864_100002514 | 3300005618 | Bacteria | 15153 |
| 72 | Ga0068864_100012415 | 3300005618 | Bacteria | 7045 |
| 73 | Ga0068864_100045800 | 3300005618 | Bacteria | 3752 |
| 74 | Ga0068866_10004125 | 3300005718 | Bacteria | 5960 |
| 75 | Ga0068861_100008148 | 3300005719 | Bacteria | 7208 |
| 76 | Ga0068861_100015233 | 3300005719 | Bacteria | 5413 |
| 77 | Ga0068861_100039066 | 3300005719 | Unclassified | 3540 |
| 78 | Ga0068863_100051652 | 3300005841 | Bacteria | 3895 |
| 79 | Ga0068858_100022436 | 3300005842 | Bacteria | 5891 |
| 80 | Ga0068858_100035382 | 3300005842 | Bacteria | 4633 |
| 81 | Ga0068858_100232312 | 3300005842 | Bacteria | 1749 |
| 82 | Ga0068860_100063766 | 3300005843 | Bacteria | 3499 |
| 83 | Ga0068860_100101877 | 3300005843 | Bacteria | 2739 |
| 84 | Ga0081539_10000073 | 3300005985 | Bacteria | 231470 |
| 85 | Ga0081539_10001715 | 3300005985 | Bacteria | 35136 |
| 86 | Ga0081539_10013376 | 3300005985 | Bacteria | 6188 |
| 87 | Ga0081539_10029771 | 3300005985 | Bacteria | 3403 |
| 88 | Ga0070716_100000079 | 3300006173 | Bacteria | 37849 |
| 89 | Ga0097621_100004289 | 3300006237 | Bacteria | 9902 |
| 90 | Ga0097621_100022712 | 3300006237 | Bacteria | 4873 |
| 91 | Ga0075433_10047465 | 3300006852 | Bacteria | 3735 |
| 92 | Ga0075436_100092041 | 3300006914 | Bacteria | 2108 |
| 93 | Ga0097620_100007295 | 3300006931 | Bacteria | 11215 |
| 94 | Ga0097620_100023588 | 3300006931 | Bacteria | 6175 |
| 95 | Ga0097620_100031804 | 3300006931 | Bacteria | 5300 |
| 96 | Ga0097620_100096965 | 3300006931 | Bacteria | 3001 |
| 97 | Ga0097620_100115347 | 3300006931 | Unclassified | 2751 |
| 98 | Ga0097620_100149261 | 3300006931 | Bacteria | 2413 |
| 99 | Ga0097620_100175542 | 3300006931 | Bacteria | 2224 |
| 100 | Ga0097620_100176419 | 3300006931 | Bacteria | 2219 |
| 101 | Ga0097620_100199023 | 3300006931 | Bacteria | 2088 |
| 102 | Ga0097620_100224553 | 3300006931 | Bacteria | 1966 |
| 103 | Ga0097620_100227236 | 3300006931 | Bacteria | 1954 |
| 104 | Ga0105240_10033643 | 3300009093 | Bacteria | 6618 |
| 105 | Ga0111539_10000228 | 3300009094 | Bacteria | 67465 |
| 106 | Ga0111539_10013681 | 3300009094 | Bacteria | 10137 |
| 107 | Ga0111539_10018432 | 3300009094 | Bacteria | 8647 |
| 108 | Ga0105247_10000944 | 3300009101 | Bacteria | 21912 |
| 109 | Ga0105247_10040861 | 3300009101 | Bacteria | 2836 |
| 110 | Ga0114129_10010021 | 3300009147 | Bacteria | 13509 |
| 111 | Ga0114129_10229932 | 3300009147 | Bacteria | 2498 |
| 112 | Ga0114129_10427207 | 3300009147 | Bacteria | 1741 |
| 113 | Ga0105243_10000908 | 3300009148 | Bacteria | 27830 |
| 114 | Ga0105243_10033865 | 3300009148 | Unclassified | 3951 |
| 115 | Ga0105243_10096299 | 3300009148 | Bacteria | 2448 |
| 116 | Ga0105241_10049362 | 3300009174 | Bacteria | 3205 |
| 117 | Ga0105242_10000621 | 3300009176 | Bacteria | 27830 |
| 118 | Ga0105242_10098196 | 3300009176 | Bacteria | 2477 |
| 119 | Ga0105248_10006400 | 3300009177 | Bacteria | 12919 |
| 120 | Ga0105248_10008081 | 3300009177 | Bacteria | 11549 |
| 121 | Ga0105248_10090066 | 3300009177 | Bacteria | 3454 |
| 122 | Ga0105237_10003830 | 3300009545 | Bacteria | 17683 |
| 123 | Ga0105237_10095923 | 3300009545 | Bacteria | 2956 |
| 124 | Ga0105238_10027946 | 3300009551 | Bacteria | 5748 |
| 125 | Ga0105238_10029980 | 3300009551 | Bacteria | 5537 |
| 126 | Ga0105249_10032194 | 3300009553 | Unclassified | 4743 |
| 127 | Ga0105239_10070745 | 3300010375 | Unclassified | 3832 |
| 128 | Ga0157373_10001858 | 3300013100 | Bacteria | 16027 |
| 129 | Ga0157378_10001322 | 3300013297 | Bacteria | 22280 |
| 130 | Ga0157378_10010718 | 3300013297 | Bacteria | 8012 |
| 131 | Ga0157378_10020084 | 3300013297 | Bacteria | 5875 |
| 132 | Ga0163162_10001013 | 3300013306 | Bacteria | 26117 |
| 133 | Ga0163162_10133022 | 3300013306 | Unclassified | 2597 |
| 134 | Ga0163162_10185473 | 3300013306 | Bacteria | 2207 |
| 135 | Ga0157372_10044070 | 3300013307 | Bacteria | 4943 |
| 136 | Ga0157375_10008670 | 3300013308 | Bacteria | 8909 |
| 137 | Ga0157375_10078849 | 3300013308 | Unclassified | 3328 |
| 138 | Ga0163163_10000792 | 3300014325 | Bacteria | 26791 |
| 139 | Ga0163163_10001129 | 3300014325 | Bacteria | 22678 |
| 140 | Ga0163163_10006454 | 3300014325 | Bacteria | 10257 |
| 141 | Ga0163163_10073325 | 3300014325 | Bacteria | 3414 |
| 142 | Ga0163163_10164749 | 3300014325 | Bacteria | 2262 |
| 143 | Ga0157380_10011006 | 3300014326 | Bacteria | 6524 |
| 144 | Ga0157379_10116277 | 3300014968 | Unclassified | 2405 |
| 145 | Ga0157376_10017923 | 3300014969 | Bacteria | 5414 |
| 146 | Ga0207653_10000278 | 3300025885 | Bacteria | 30259 |
| 147 | Ga0207710_10003722 | 3300025900 | Bacteria | 6752 |
| 148 | Ga0207647_10002055 | 3300025904 | Bacteria | 15381 |
| 149 | Ga0207643_10000772 | 3300025908 | Bacteria | 19526 |
| 150 | Ga0207684_10000327 | 3300025910 | Bacteria | 67005 |
| 151 | Ga0207684_10007666 | 3300025910 | Bacteria | 9681 |
| 152 | Ga0207684_10009291 | 3300025910 | Bacteria | 8686 |
| 153 | Ga0207684_10060836 | 3300025910 | Unclassified | 3208 |
| 154 | Ga0207654_10079251 | 3300025911 | Bacteria | 1973 |
| 155 | Ga0207695_10044909 | 3300025913 | Bacteria | 4695 |
| 156 | Ga0207662_10012363 | 3300025918 | Unclassified | 4751 |
| 157 | Ga0207646_10003588 | 3300025922 | Bacteria | 17390 |
| 158 | Ga0207646_10011820 | 3300025922 | Bacteria | 8428 |
| 159 | Ga0207646_10013292 | 3300025922 | Bacteria | 7877 |
| 160 | Ga0207646_10039601 | 3300025922 | Bacteria | 4242 |
| 161 | Ga0207646_10044247 | 3300025922 | Bacteria | 3996 |
| 162 | Ga0207646_10156298 | 3300025922 | Bacteria | 2057 |
| 163 | Ga0207681_10087895 | 3300025923 | Bacteria | 2212 |
| 164 | Ga0207694_10017813 | 3300025924 | Bacteria | 5369 |
| 165 | Ga0207650_10000313 | 3300025925 | Bacteria | 47889 |
| 166 | Ga0207659_10042953 | 3300025926 | Bacteria | 3172 |
| 167 | Ga0207644_10018459 | 3300025931 | Bacteria | 4719 |
| 168 | Ga0207686_10000024 | 3300025934 | Bacteria | 171857 |
| 169 | Ga0207709_10000650 | 3300025935 | Bacteria | 28186 |
| 170 | Ga0207670_10003326 | 3300025936 | Bacteria | 8522 |
| 171 | Ga0207711_10087929 | 3300025941 | Unclassified | 2727 |
| 172 | Ga0207711_10226123 | 3300025941 | Bacteria | 1713 |
| 173 | Ga0207689_10027317 | 3300025942 | Unclassified | 4778 |
| 174 | Ga0207712_10002045 | 3300025961 | Bacteria | 13239 |
| 175 | Ga0207703_10203231 | 3300026035 | Bacteria | 1762 |
| 176 | Ga0207703_10215475 | 3300026035 | Bacteria | 1714 |
| 177 | Ga0207708_10000149 | 3300026075 | Bacteria | 56107 |
| 178 | Ga0207708_10017096 | 3300026075 | Bacteria | 5459 |
| 179 | Ga0207708_10042498 | 3300026075 | Bacteria | 3465 |
| 180 | Ga0207641_10092213 | 3300026088 | Bacteria | 2653 |
| 181 | Ga0207676_10011881 | 3300026095 | Bacteria | 6231 |
| 182 | Ga0207674_10049366 | 3300026116 | Bacteria | 4304 |
| 183 | Ga0207674_10070294 | 3300026116 | Bacteria | 3519 |
| 184 | Ga0207675_100001760 | 3300026118 | Bacteria | 21670 |
| 185 | Ga0207675_100004070 | 3300026118 | Bacteria | 14154 |
| 186 | Ga0207675_100091775 | 3300026118 | Bacteria | 2856 |
| 187 | Ga0207698_10053963 | 3300026142 | Unclassified | 3089 |
| 188 | Ga0207428_10009629 | 3300027907 | Bacteria | 8654 |
| 189 | Ga0207428_10014168 | 3300027907 | Bacteria | 6940 |
| 190 | Ga0268266_10041514 | 3300028379 | Bacteria | 3926 |
| 191 | Ga0268265_10179448 | 3300028380 | Bacteria | 1818 |
| 192 | Ga0268264_10143524 | 3300028381 | Bacteria | 2132 |
| 193 | Ga0307513_10013668 | 3300031456 | Bacteria | 9954 |
| 194 | Ga0307408_100028870 | 3300031548 | Unclassified | 3837 |
| 195 | Ga0307405_10006760 | 3300031731 | Bacteria | 5673 |
| 196 | Ga0307412_10085109 | 3300031911 | Bacteria | 2197 |
| 197 | Ga0307409_100045158 | 3300031995 | Bacteria | 3324 |
| 198 | Ga0307416_100007484 | 3300032002 | Bacteria | 6950 |
| 199 | Ga0307416_100074688 | 3300032002 | Bacteria | 2834 |
| 200 | Ga0307414_10048853 | 3300032004 | Bacteria | 2922 |
| 201 | Ga0373951_0002362 | 3300035091 | Unclassified | 4787 |
| 202 | Ga0395905_0007943 | 3300037471 | Bacteria | 10494 |
| 203 | Ga0451577_0038646 | 3300042876 | Unclassified | 4292 |
| 204 | Ga0451576_0016124 | 3300045051 | Bacteria | 8255 |
| 205 | Ga0495663_0000250 | 3300046525 | Bacteria | 20919 |
| 206 | Ga0495598_0000043 | 3300046537 | Bacteria | 19015 |
| 207 | Ga0495621_0000620 | 3300046539 | Bacteria | 8926 |
| 208 | Ga0496108_0128686 | 3300048911 | Bacteria | 2176 |
| 209 | Ga0496112_0130249 | 3300048915 | Bacteria | 2487 |
| 210 | Ga0501038_0002990 | 3300049574 | Bacteria | 15762 |
| 211 | Ga0501198_001060 | 3300049649 | Unclassified | 3507 |
| 212 | Ga0501223_002219 | 3300049663 | Unclassified | 4345 |
| 213 | Ga0501227_006560 | 3300049665 | Bacteria | 2499 |
| 214 | Ga0501240_001481 | 3300049673 | Bacteria | 2301 |
| 215 | Ga0501234_005529 | 3300049707 | Bacteria | 1978 |
| 216 | nmdc:mga05p37_262354_c1 | 3300050507 | Bacteria | 2067 |
| 217 | nmdc:mga08y16_23972_c1 | 3300050511 | Bacteria | 6445 |
| 218 | nmdc:mga0n895_33305_c1 | 3300050512 | Bacteria | 4951 |
| 219 | nmdc:mga0rr50_91314_c1 | 3300050513 | Unclassified | 2371 |
| 220 | nmdc:mga0rr50_98789_c1 | 3300050513 | Bacteria | 2289 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300028380 | Ga0268265_10179448 | Ga0268265_101794481 | 409 |
| 2 | 3300025922 | Ga0207646_10156298 | Ga0207646_101562982 | 425 |
| 3 | 3300013308 | Ga0157375_10008670 | Ga0157375_100086707 | 437 |
| 4 | 3300009148 | Ga0105243_10000908 | Ga0105243_1000090821 | 441 |
| 5 | 3300009176 | Ga0105242_10000621 | Ga0105242_1000062121 | 441 |
| 6 | 3300025934 | Ga0207686_10000024 | Ga0207686_10000024132 | 441 |
| 7 | 3300025935 | Ga0207709_10000650 | Ga0207709_100006503 | 441 |
| 8 | 3300009101 | Ga0105247_10040861 | Ga0105247_100408612 | 443 |
| 9 | 3300009177 | Ga0105248_10006400 | Ga0105248_100064009 | 443 |
| 10 | 3300005466 | Ga0070685_10058451 | Ga0070685_100584512 | 449 |
| 11 | 3300025941 | Ga0207711_10087929 | Ga0207711_100879291 | 449 |
| 12 | 3300049665 | Ga0501227_006560 | Ga0501227_006560_60_1424 | 452 |
| 13 | 3300014325 | Ga0163163_10164749 | Ga0163163_101647492 | 454 |
| 14 | 3300048911 | Ga0496108_0128686 | Ga0496108_0128686_692_2074 | 454 |
| 15 | 3300014325 | Ga0163163_10073325 | Ga0163163_100733251 | 459 |
| 16 | 3300050511 | nmdc:mga08y16_23972_c1 | nmdc:mga08y16_23972_c1_2235_3632 | 459 |
| 17 | 3300005985 | Ga0081539_10001715 | Ga0081539_100017152 | 460 |
| 18 | 3300009147 | Ga0114129_10010021 | Ga0114129_1001002110 | 460 |
| 19 | 3300009174 | Ga0105241_10049362 | Ga0105241_100493623 | 460 |
| 20 | 3300027907 | Ga0207428_10009629 | Ga0207428_100096293 | 460 |
| 21 | 3300050507 | nmdc:mga05p37_262354_c1 | nmdc:mga05p37_262354_c1_207_1703 | 460 |
| 22 | 3300025910 | Ga0207684_10060836 | Ga0207684_100608363 | 462 |
| 23 | 3300005546 | Ga0070696_100022863 | Ga0070696_1000228633 | 465 |
| 24 | 3300005985 | Ga0081539_10013376 | Ga0081539_100133764 | 466 |
| 25 | 3300005331 | Ga0070670_100076596 | Ga0070670_1000765961 | 468 |
| 26 | 3300005444 | Ga0070694_100001072 | Ga0070694_10000107217 | 469 |
| 27 | 3300014325 | Ga0163163_10006454 | Ga0163163_100064544 | 469 |
| 28 | 3300031548 | Ga0307408_100028870 | Ga0307408_1000288703 | 470 |
| 29 | 3300031731 | Ga0307405_10006760 | Ga0307405_100067605 | 470 |
| 30 | 3300031995 | Ga0307409_100045158 | Ga0307409_1000451582 | 470 |
| 31 | 3300032002 | Ga0307416_100007484 | Ga0307416_1000074846 | 470 |
| 32 | 3300049649 | Ga0501198_001060 | Ga0501198_001060_1397_2824 | 470 |
| 33 | 3300049663 | Ga0501223_002219 | Ga0501223_002219_1528_2955 | 470 |
| 34 | 3300049673 | Ga0501240_001481 | Ga0501240_001481_740_2167 | 470 |
| 35 | 3300049707 | Ga0501234_005529 | Ga0501234_005529_163_1590 | 470 |
| 36 | 3300005345 | Ga0070692_10060413 | Ga0070692_100604131 | 471 |
| 37 | 3300005441 | Ga0070700_100071700 | Ga0070700_1000717002 | 471 |
| 38 | 3300005459 | Ga0068867_100152513 | Ga0068867_1001525131 | 471 |
| 39 | 3300005545 | Ga0070695_100095171 | Ga0070695_1000951711 | 471 |
| 40 | 3300005617 | Ga0068859_100175531 | Ga0068859_1001755312 | 471 |
| 41 | 3300005617 | Ga0068859_100227236 | Ga0068859_1002272362 | 471 |
| 42 | 3300005618 | Ga0068864_100045800 | Ga0068864_1000458003 | 471 |
| 43 | 3300006931 | Ga0097620_100175542 | Ga0097620_1001755422 | 471 |
| 44 | 3300006931 | Ga0097620_100227236 | Ga0097620_1002272362 | 471 |
| 45 | 3300009148 | Ga0105243_10096299 | Ga0105243_100962992 | 471 |
| 46 | 3300009177 | Ga0105248_10090066 | Ga0105248_100900662 | 471 |
| 47 | 3300009551 | Ga0105238_10027946 | Ga0105238_100279463 | 471 |
| 48 | 3300009553 | Ga0105249_10032194 | Ga0105249_100321944 | 471 |
| 49 | 3300013306 | Ga0163162_10133022 | Ga0163162_101330222 | 471 |
| 50 | 3300013306 | Ga0163162_10185473 | Ga0163162_101854731 | 471 |
| 51 | 3300026075 | Ga0207708_10017096 | Ga0207708_100170964 | 471 |
| 52 | 3300005293 | Ga0065715_10095143 | Ga0065715_100951431 | 472 |
| 53 | 3300005345 | Ga0070692_10022467 | Ga0070692_100224673 | 472 |
| 54 | 3300005471 | Ga0070698_100074683 | Ga0070698_1000746832 | 472 |
| 55 | 3300005615 | Ga0070702_100012847 | Ga0070702_1000128474 | 472 |
| 56 | 3300027907 | Ga0207428_10014168 | Ga0207428_100141686 | 472 |
| 57 | 3300013308 | Ga0157375_10078849 | Ga0157375_100788494 | 473 |
| 58 | 3300050513 | nmdc:mga0rr50_98789_c1 | nmdc:mga0rr50_98789_c1_92_1528 | 473 |
| 59 | 3300005518 | Ga0070699_100032549 | Ga0070699_1000325494 | 474 |
| 60 | 3300009094 | Ga0111539_10013681 | Ga0111539_100136814 | 474 |
| 61 | 3300009101 | Ga0105247_10000944 | Ga0105247_1000094410 | 474 |
| 62 | 3300009545 | Ga0105237_10095923 | Ga0105237_100959232 | 474 |
| 63 | 3300005331 | Ga0070670_100000297 | Ga0070670_10000029720 | 475 |
| 64 | 3300005441 | Ga0070700_100000087 | Ga0070700_10000008743 | 475 |
| 65 | 3300006914 | Ga0075436_100092041 | Ga0075436_1000920412 | 475 |
| 66 | 3300009094 | Ga0111539_10018432 | Ga0111539_100184325 | 475 |
| 67 | 3300009147 | Ga0114129_10427207 | Ga0114129_104272071 | 475 |
| 68 | 3300014968 | Ga0157379_10116277 | Ga0157379_101162772 | 475 |
| 69 | 3300026075 | Ga0207708_10000149 | Ga0207708_1000014935 | 475 |
| 70 | 3300003203 | JGI25406J46586_10039546 | JGI25406J46586_100395461 | 476 |
| 71 | 3300005444 | Ga0070694_100041266 | Ga0070694_1000412663 | 476 |
| 72 | 3300005617 | Ga0068859_100149276 | Ga0068859_1001492763 | 476 |
| 73 | 3300005842 | Ga0068858_100035382 | Ga0068858_1000353823 | 476 |
| 74 | 3300005843 | Ga0068860_100101877 | Ga0068860_1001018772 | 476 |
| 75 | 3300006931 | Ga0097620_100149261 | Ga0097620_1001492611 | 476 |
| 76 | 3300025918 | Ga0207662_10012363 | Ga0207662_100123632 | 476 |
| 77 | 3300026035 | Ga0207703_10215475 | Ga0207703_102154751 | 476 |
| 78 | 3300005440 | Ga0070705_100005473 | Ga0070705_1000054731 | 477 |
| 79 | 3300005445 | Ga0070708_100000281 | Ga0070708_10000028119 | 477 |
| 80 | 3300005467 | Ga0070706_100001677 | Ga0070706_10000167720 | 477 |
| 81 | 3300005471 | Ga0070698_100047664 | Ga0070698_1000476643 | 477 |
| 82 | 3300005518 | Ga0070699_100002373 | Ga0070699_10000237316 | 477 |
| 83 | 3300005545 | Ga0070695_100020450 | Ga0070695_1000204503 | 477 |
| 84 | 3300005985 | Ga0081539_10029771 | Ga0081539_100297714 | 477 |
| 85 | 3300009148 | Ga0105243_10033865 | Ga0105243_100338653 | 477 |
| 86 | 3300005719 | Ga0068861_100008148 | Ga0068861_1000081488 | 479 |
| 87 | 3300026118 | Ga0207675_100004070 | Ga0207675_1000040705 | 479 |
| 88 | 3300005617 | Ga0068859_100007296 | Ga0068859_1000072968 | 480 |
| 89 | 3300005618 | Ga0068864_100012415 | Ga0068864_1000124153 | 480 |
| 90 | 3300005841 | Ga0068863_100051652 | Ga0068863_1000516524 | 480 |
| 91 | 3300006931 | Ga0097620_100007295 | Ga0097620_1000072953 | 480 |
| 92 | 3300025908 | Ga0207643_10000772 | Ga0207643_100007724 | 480 |
| 93 | 3300025922 | Ga0207646_10039601 | Ga0207646_100396011 | 480 |
| 94 | 3300026095 | Ga0207676_10011881 | Ga0207676_100118813 | 480 |
| 95 | 3300049574 | Ga0501038_0002990 | Ga0501038_0002990_7408_8880 | 481 |
| 96 | 3300005334 | Ga0068869_100108384 | Ga0068869_1001083842 | 482 |
| 97 | 3300005366 | Ga0070659_100110855 | Ga0070659_1001108552 | 482 |
| 98 | 3300005539 | Ga0068853_100048085 | Ga0068853_1000480852 | 482 |
| 99 | 3300005617 | Ga0068859_100023588 | Ga0068859_1000235881 | 482 |
| 100 | 3300005985 | Ga0081539_10000073 | Ga0081539_10000073130 | 482 |
| 101 | 3300006931 | Ga0097620_100023588 | Ga0097620_1000235887 | 482 |
| 102 | 3300009551 | Ga0105238_10029980 | Ga0105238_100299806 | 482 |
| 103 | 3300013100 | Ga0157373_10001858 | Ga0157373_1000185810 | 482 |
| 104 | 3300025926 | Ga0207659_10042953 | Ga0207659_100429533 | 482 |
| 105 | 3300050513 | nmdc:mga0rr50_91314_c1 | nmdc:mga0rr50_91314_c1_789_2345 | 482 |
| 106 | 3300005353 | Ga0070669_100044239 | Ga0070669_1000442392 | 483 |
| 107 | 3300005617 | Ga0068859_100031803 | Ga0068859_1000318032 | 483 |
| 108 | 3300005617 | Ga0068859_100224531 | Ga0068859_1002245312 | 483 |
| 109 | 3300005842 | Ga0068858_100022436 | Ga0068858_1000224363 | 483 |
| 110 | 3300006931 | Ga0097620_100031804 | Ga0097620_1000318042 | 483 |
| 111 | 3300006931 | Ga0097620_100224553 | Ga0097620_1002245532 | 483 |
| 112 | 3300010375 | Ga0105239_10070745 | Ga0105239_100707451 | 483 |
| 113 | 3300013297 | Ga0157378_10010718 | Ga0157378_100107184 | 483 |
| 114 | 3300025923 | Ga0207681_10087895 | Ga0207681_100878952 | 483 |
| 115 | 3300025924 | Ga0207694_10017813 | Ga0207694_100178134 | 483 |
| 116 | 3300025941 | Ga0207711_10226123 | Ga0207711_102261231 | 483 |
| 117 | 3300025961 | Ga0207712_10002045 | Ga0207712_1000204510 | 483 |
| 118 | 3300026035 | Ga0207703_10203231 | Ga0207703_102032311 | 483 |
| 119 | 3300026088 | Ga0207641_10092213 | Ga0207641_100922132 | 483 |
| 120 | 3300028381 | Ga0268264_10143524 | Ga0268264_101435242 | 483 |
| 121 | 3300035091 | Ga0373951_0002362 | Ga0373951_0002362_1449_2939 | 483 |
| 122 | 3300042876 | Ga0451577_0038646 | Ga0451577_0038646_2471_4009 | 483 |
| 123 | 3300045051 | Ga0451576_0016124 | Ga0451576_0016124_5758_7296 | 483 |
| 124 | 3300050512 | nmdc:mga0n895_33305_c1 | nmdc:mga0n895_33305_c1_470_2008 | 483 |
| 125 | 3300005355 | Ga0070671_100010063 | Ga0070671_1000100634 | 485 |
| 126 | 3300005547 | Ga0070693_100024553 | Ga0070693_1000245532 | 485 |
| 127 | 3300005617 | Ga0068859_100115348 | Ga0068859_1001153481 | 485 |
| 128 | 3300006931 | Ga0097620_100115347 | Ga0097620_1001153471 | 485 |
| 129 | 3300009093 | Ga0105240_10033643 | Ga0105240_100336432 | 485 |
| 130 | 3300009545 | Ga0105237_10003830 | Ga0105237_100038305 | 485 |
| 131 | 3300013307 | Ga0157372_10044070 | Ga0157372_100440704 | 485 |
| 132 | 3300025913 | Ga0207695_10044909 | Ga0207695_100449095 | 485 |
| 133 | 3300025931 | Ga0207644_10018459 | Ga0207644_100184594 | 485 |
| 134 | 3300026116 | Ga0207674_10070294 | Ga0207674_100702944 | 485 |
| 135 | 3300026142 | Ga0207698_10053963 | Ga0207698_100539632 | 485 |
| 136 | 3300048915 | Ga0496112_0130249 | Ga0496112_0130249_469_1953 | 485 |
| 137 | 3300005467 | Ga0070706_100000146 | Ga0070706_10000014667 | 486 |
| 138 | 3300005518 | Ga0070699_100001043 | Ga0070699_10000104315 | 486 |
| 139 | 3300006173 | Ga0070716_100000079 | Ga0070716_1000000793 | 486 |
| 140 | 3300006931 | Ga0097620_100176419 | Ga0097620_1001764191 | 486 |
| 141 | 3300025900 | Ga0207710_10003722 | Ga0207710_100037223 | 486 |
| 142 | 3300025910 | Ga0207684_10000327 | Ga0207684_1000032749 | 486 |
| 143 | 3300002459 | JGI24751J29686_10000099 | JGI24751J29686_1000009928 | 487 |
| 144 | 3300005406 | Ga0070703_10000171 | Ga0070703_1000017120 | 487 |
| 145 | 3300005445 | Ga0070708_100049330 | Ga0070708_1000493303 | 487 |
| 146 | 3300005468 | Ga0070707_100022965 | Ga0070707_1000229653 | 487 |
| 147 | 3300025885 | Ga0207653_10000278 | Ga0207653_1000027816 | 487 |
| 148 | 3300025911 | Ga0207654_10079251 | Ga0207654_100792512 | 487 |
| 149 | 3300025922 | Ga0207646_10003588 | Ga0207646_100035884 | 487 |
| 150 | 3300025925 | Ga0207650_10000313 | Ga0207650_1000031328 | 487 |
| 151 | 3300026075 | Ga0207708_10042498 | Ga0207708_100424982 | 487 |
| 152 | 3300005718 | Ga0068866_10004125 | Ga0068866_100041256 | 488 |
| 153 | 3300013297 | Ga0157378_10020084 | Ga0157378_100200844 | 488 |
| 154 | 3300005468 | Ga0070707_100008484 | Ga0070707_1000084846 | 489 |
| 155 | 3300025922 | Ga0207646_10011820 | Ga0207646_100118208 | 489 |
| 156 | 3300026116 | Ga0207674_10049366 | Ga0207674_100493662 | 489 |
| 157 | 3300005288 | Ga0065714_10064424 | Ga0065714_10064424105 | 490 |
| 158 | 3300005290 | Ga0065712_10000117 | Ga0065712_10000117105 | 490 |
| 159 | 3300005334 | Ga0068869_100007547 | Ga0068869_1000075476 | 490 |
| 160 | 3300005719 | Ga0068861_100039066 | Ga0068861_1000390663 | 490 |
| 161 | 3300006852 | Ga0075433_10047465 | Ga0075433_100474652 | 490 |
| 162 | 3300026118 | Ga0207675_100001760 | Ga0207675_1000017607 | 490 |
| 163 | 3300031911 | Ga0307412_10085109 | Ga0307412_100851091 | 490 |
| 164 | 3300005337 | Ga0070682_100000548 | Ga0070682_10000054811 | 491 |
| 165 | 3300005340 | Ga0070689_100094296 | Ga0070689_1000942962 | 491 |
| 166 | 3300005536 | Ga0070697_100000135 | Ga0070697_10000013515 | 491 |
| 167 | 3300009147 | Ga0114129_10229932 | Ga0114129_102299322 | 491 |
| 168 | 3300025922 | Ga0207646_10044247 | Ga0207646_100442473 | 491 |
| 169 | 3300031456 | Ga0307513_10013668 | Ga0307513_100136683 | 491 |
| 170 | 3300032002 | Ga0307416_100074688 | Ga0307416_1000746883 | 491 |
| 171 | 3300037471 | Ga0395905_0007943 | Ga0395905_0007943_8157_9806 | 491 |
| 172 | 3300046525 | Ga0495663_0000250 | Ga0495663_0000250_13742_15280 | 491 |
| 173 | 3300046537 | Ga0495598_0000043 | Ga0495598_0000043_1291_2829 | 491 |
| 174 | 3300046539 | Ga0495621_0000620 | Ga0495621_0000620_4839_6377 | 491 |
| 175 | 3300005295 | Ga0065707_10002183 | Ga0065707_100021834 | 492 |
| 176 | 3300005471 | Ga0070698_100001335 | Ga0070698_1000013359 | 492 |
| 177 | 3300005471 | Ga0070698_100009193 | Ga0070698_1000091938 | 492 |
| 178 | 3300005518 | Ga0070699_100036991 | Ga0070699_1000369913 | 492 |
| 179 | 3300025910 | Ga0207684_10009291 | Ga0207684_100092918 | 492 |
| 180 | 3300025942 | Ga0207689_10027317 | Ga0207689_100273172 | 492 |
| 181 | 3300005334 | Ga0068869_100003815 | Ga0068869_1000038157 | 493 |
| 182 | 3300005338 | Ga0068868_100119704 | Ga0068868_1001197042 | 493 |
| 183 | 3300005471 | Ga0070698_100011852 | Ga0070698_1000118522 | 493 |
| 184 | 3300005719 | Ga0068861_100015233 | Ga0068861_1000152332 | 493 |
| 185 | 3300026118 | Ga0207675_100091775 | Ga0207675_1000917752 | 493 |
| 186 | 3300005340 | Ga0070689_100155370 | Ga0070689_1001553702 | 494 |
| 187 | 3300005355 | Ga0070671_100069458 | Ga0070671_1000694581 | 494 |
| 188 | 3300005471 | Ga0070698_100207440 | Ga0070698_1002074402 | 494 |
| 189 | 3300005548 | Ga0070665_100015048 | Ga0070665_1000150483 | 494 |
| 190 | 3300005617 | Ga0068859_100096958 | Ga0068859_1000969582 | 494 |
| 191 | 3300005617 | Ga0068859_100199017 | Ga0068859_1001990172 | 494 |
| 192 | 3300005618 | Ga0068864_100002514 | Ga0068864_1000025149 | 494 |
| 193 | 3300005842 | Ga0068858_100232312 | Ga0068858_1002323121 | 494 |
| 194 | 3300005843 | Ga0068860_100063766 | Ga0068860_1000637663 | 494 |
| 195 | 3300006237 | Ga0097621_100004289 | Ga0097621_1000042899 | 494 |
| 196 | 3300006237 | Ga0097621_100022712 | Ga0097621_1000227124 | 494 |
| 197 | 3300006931 | Ga0097620_100096965 | Ga0097620_1000969652 | 494 |
| 198 | 3300006931 | Ga0097620_100199023 | Ga0097620_1001990232 | 494 |
| 199 | 3300009094 | Ga0111539_10000228 | Ga0111539_1000022818 | 494 |
| 200 | 3300009176 | Ga0105242_10098196 | Ga0105242_100981962 | 494 |
| 201 | 3300009177 | Ga0105248_10008081 | Ga0105248_100080818 | 494 |
| 202 | 3300013297 | Ga0157378_10001322 | Ga0157378_1000132212 | 494 |
| 203 | 3300013306 | Ga0163162_10001013 | Ga0163162_100010138 | 494 |
| 204 | 3300014325 | Ga0163163_10001129 | Ga0163163_1000112918 | 494 |
| 205 | 3300014969 | Ga0157376_10017923 | Ga0157376_100179236 | 494 |
| 206 | 3300025904 | Ga0207647_10002055 | Ga0207647_100020551 | 494 |
| 207 | 3300028379 | Ga0268266_10041514 | Ga0268266_100415142 | 494 |
| 208 | 3300005536 | Ga0070697_100092773 | Ga0070697_1000927732 | 495 |
| 209 | 3300005340 | Ga0070689_100000425 | Ga0070689_10000042517 | 496 |
| 210 | 3300005547 | Ga0070693_100005553 | Ga0070693_1000055531 | 496 |
| 211 | 3300014326 | Ga0157380_10011006 | Ga0157380_100110063 | 496 |
| 212 | 3300025936 | Ga0207670_10003326 | Ga0207670_100033263 | 496 |
| 213 | 3300014325 | Ga0163163_10000792 | Ga0163163_1000079219 | 497 |
| 214 | 3300032004 | Ga0307414_10048853 | Ga0307414_100488533 | 498 |
| 215 | 3300005468 | Ga0070707_100028632 | Ga0070707_1000286323 | 500 |
| 216 | 3300005471 | Ga0070698_100008222 | Ga0070698_1000082222 | 502 |
| 217 | 3300005536 | Ga0070697_100057883 | Ga0070697_1000578832 | 502 |
| 218 | 3300025910 | Ga0207684_10007666 | Ga0207684_100076668 | 502 |
| 219 | 3300025922 | Ga0207646_10013292 | Ga0207646_100132924 | 502 |
| 220 | 2162886011 | MRS1b_contig_6134487 | MRS1b_0135.00000150 | 505 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1nvt-assembly1.cif.gz_B | crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with nadp+ | 0.9243 | 232 | 502 |
| 2o7s-assembly1.cif.gz_A | crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-shikimate-nadp(h) | 0.8974 | 13 | 505 |
| 2o7q-assembly1.cif.gz_A | crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-shikimate-nadp(h) | 0.8962 | 13 | 505 |
| 3jyo-assembly1.cif.gz_A | quinate dehydrogenase from corynebacterium glutamicum in complex with nad | 0.8951 | 236 | 500 |
| 6bmb-assembly1.cif.gz_A | crystal structure of arabidopsis dehydroquinate dehydratase-shikimate dehydrogenase (t381g mutant) in complex with tartrate and shikimate | 0.8898 | 13 | 505 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1nvtA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 | 0.9428 | 232 | 502 | 3.40.50.10860 |
| 2eggB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 | 0.9406 | 236 | 502 | 3.40.50.10860 |
| 2o7sA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 | 0.9327 | 236 | 338 | 3.40.50.10860 |
| 2o7sA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 | 0.9235 | 236 | 338 | 3.40.50.10860 |
| 2eggB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 | 0.9164 | 236 | 502 | 3.40.50.10860 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W1KXW6-F1-model_v4 | shikimate dehydrogenase (NADP(+)) (EC 1.1.1.25) | 0.969 | 76 | 505 |
GO:0003855
GO:0004764 GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A1V4QLF3-F1-model_v4 | 3-dehydroquinate dehydratase (EC 4.2.1.10) | 0.9603 | 122 | 225 |
GO:0003855
GO:0046279 |
| AF-A0A3D0P7A2-F1-model_v4 | shikimate dehydrogenase (NADP(+)) (EC 1.1.1.25) | 0.9582 | 69 | 503 |
GO:0003855
GO:0004764 GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A2N2FGK5-F1-model_v4 | shikimate dehydrogenase (NADP(+)) (EC 1.1.1.25) | 0.9552 | 294 | 504 |
GO:0004764
GO:0008652 GO:0009073 GO:0009423 GO:0019632 GO:0050661 |
| AF-A0A353CDJ3-F1-model_v4 | Shikimate dehydrogenase substrate binding N-terminal domain-containing protein | 0.9496 | 12 | 382 |
GO:0003855
GO:0004764 GO:0009423 GO:0019632 |
Predicted Structure (AlphaFold2)
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