Scaffold Information

Sample ID 3300006173
Scaffold Ga0070716_100000079
Sample Name Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG
Length 37849
Fam Num 3
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;uncultured

CRISPR Details

Start Coordinate: 29011 End Coordinate: 37850
Position Repeat Spacer
29011 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGCAAAGTGCTGTAGACTGGATTAACTTGCTCCACTGG
29085 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AACCAAGTCGTTACACCCTACTATCACAAAAATTTTTTC
29160 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTTAATTCGGAAAATTATTCCCACCTTTGTTCCTGA
29232 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTAAGTAAAAACGAGTTATCAGAACTCGTGAAAAAA
29304 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CAAGAGGGTAGGTATCAAAATCTCATCCATCCACACCTT
29379 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGTGCACTTGTTTTTCGTGGCTCAACTTCCTCGTGCA
29453 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AATAACGTACTCCGCTATCATCTCTTACTCAAGAT
29524 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAAATAGTTATGTAATCGACGCGGCCGCGAAAGTGCT
29597 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGAAAACAGCCCAAGCTTCTAAGTCAGTCATCGA
29668 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTCAATCCACCGAACAATGCCGCGGCCAGCGAACT
29739 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATCGCATCAGCGCTTCTCGATGTCGGCGGCAAAATCA
29812 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AACCTGGGAGAGATCATGTCGGTGCTGATCCAGCACCAGC
29888 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGCTGTCCAGGGCTCGTATGCTCTGCCTCAGCCATAC
29962 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGATTCGCGGGGTGTAAGATACTCGTCGGGGAC
30032 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CTGACAGTCGGCGCGTGAATTACCCTCGATGGGTTC
30104 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTCAGTCGATGGTTCCGGAAACTCTTGGTACGCAACTC
30178 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGAAACCCGAGACATCTGAGGTACAGTATCTGTCCGC
30251 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGATGGATTTCAGTAGTCTTTTTCCAAGTCTCGCGGGTC
30326 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TACCGTTGCCCGCCGCATCAGTAAGCACACTGCCTGCTAC
30402 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTTAAGGATGCGTAACGAACTGATTTTAGTCCGCTA
30474 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCGTCATCGGAAACCACTTGCAATCTGTTCCACATT
30546 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GCGATACGGCGGTTTACATCAAAGATGAAGACGATT
30618 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGGCTATGTGGCAGTTGGCGACGCTGATCCCGGAACCGCACGAC
30698 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCGCCGATCTTAAATCCTTCGTTAGTCAGATCGAGAATC
30773 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAATCGAGATCGTGTATCAGAACGAGCCTGATCT
30843 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GATTATTAGCTGGGAAAGTATGGCAGAGCAACCTCGA
30916 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CAATCTGAAATTGGCGGGGTTAATTCGGCGAGACACGG
30990 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTGGAATGATCGTTGGCGAGGCTGGTGCTCGCCGGTGC
31064 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GGGCTGACAATGGCTGCGCTGATCGCCACCGCTCGACT
31138 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCGTTACTGAAACTGTATTCAACGTGAACCATCGGAGT
31212 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TACTACCGAACTGGAGATCATGCAAATGTTATTCGGCTT
31287 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AACTCGTCTTCCGCAACGACGCGAAGTTCAACAATAA
31360 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCGATCAGCAGCATTACACCGTGGACTCAGTTTCGTCCTT
31436 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTTTTAGTTGCGATGGTTCGATCTGCTCGAACTTGA
31508 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GATTCAGAATTCGATCATAAGTCGCTGGCCCGATCGAT
31582 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATTCAAATGGAAACCCGGTTCCTGCGCAGGCGAATCT
31655 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCGATTGGTGTCGCGGACATTGTGCTGGTGCGGACCC
31728 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGTAAACACAAAGACACCAAGACACAAAGGCACCAAG
31802 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTTCGGCTTATGCGGCGATTGGCGGTGGCGCAGGTTCGG
31877 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCTTGATTTCGAATCCGAAAGGCGAAGGCGCTGGCACT
31951 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATGGATTCAGTCGGCGACGGCGTGACTATCGGCGAGGT
32025 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TGGTTGAACCAGGATTAGAGGGCCGGCGCTGAAGTTTCCG
32101 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AATTGCTGAGAGTCTTTTCTTAGCTGCGTTTCCTGAACG
32176 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAGTAGTACGAGGCACAGATCGGCCGGCAGAACTT
32247 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAATCCTTGGTGGGCAGCACGGCGATGTCCCGCTT
32318 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAAGTAAAAGGAAGATCGCTGCCAGTGGTAAGTCT
32389 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCGAGATCAGAGCCTTCATGTGCCGTCCCTTTCGCGTGA
32464 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTGCCGAAGGGGGGAATCTTAGACACTGTCGTTTTA
32536 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTTCTATCGGCGGATATGAACGCGCCGACATCCT
32606 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTGATTTCATCTCCACCTTACGTCTCAGGCGGTCATCA
32680 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAGAAATCGGCGTTTTTGCCAAGGCCTCCGCAGGCA
32752 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAAAACGCGCCGGCTATTGGAGTATCACAGACAGAGGCG
32827 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAAACGCAGGGCGTATTCGCGGTGCGTTGAACGCTCT
32900 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATCCCGGCGGGTTCCTTTGATTGTGACAGTGACC
32970 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CAATAATCATCGGCTTCATTATCTGGCAGCATTGGAA
33043 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCAAAACGCGGTGCGGCCATGCAATTATTAACCGG
33114 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACTACATCGTAAAAGTTAAGAATCAAGTGATCGCGTCT
33188 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTTTGCGGATCGTCTGGCTCGGTATAAACCGGATTATCTG
33264 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GGCCAAGCGACCGAAGACCAAGTGCCGTGCATAAAGTGC
33339 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGCCAGTTTGATCGGGATGATGACCGCCTGAGACGTAAGG
33415 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCGAGTGGTTCGACGGTGATGATCTTGAACAGCAATTGGC
33491 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CTGCCCAGGCACTTCAGAGAGAACAGAGTCTCGGG
33562 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CTTTGCCGGATAGAAGGCCATAAACTTAGGAACAAGAC
33636 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCACTAAAGAGGGAGCCTGCACCCTGGACCGGCCCAGC
33710 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACGGCGATCCAAAAATCTCTTTCGAGTATGATCAGGAAGT
33786 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGGCATGTAAGGTTCGGCAAGATGATCGACCGTGCGCT
33860 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGGATGAACTTCAATCGTGGGTTCCTTACTTTGAACTTGGCGG
33939 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAGATCCATCCTCTGAACCGTCCCTACCCGTCATAAAGAA
34015 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AATCAGGTCCCAAATAAGTCCCGCCGTTGTTCGG
34085 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAATCGGTGACGCTCGCGCCATAGCGCGCCGCGTACAGC
34160 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATGTCTCGCTTCGTGCGGCGCACGTTGCTGGTGGGA
34232 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GATATTCGCCGACTCAAAAGTCAACCGCTGATAACG
34304 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCGTCAAAGACGTTGCAACCTTTGACGATTGC
34372 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATCATCCAGGAAGGTTGCAGTGGCAAGAAAACGA
34442 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CTCGCGCTTGCTCTTTCGTCAGCTTAAACTCTTTACG
34515 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCCAAAAGGCTACGGCGTTTCTGCCTTCTTCGACTTT
34588 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACATATTCGGAAAGGCCCAGCAAGCCTACGAACAAT
34660 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TCGCTTCATTTCTAAGGTGCTGATGATTTCAAAATCAC
34734 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTCTTAACCGGCCTGTTGGTTACAGTTCCTCCGTGAGCA
34809 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAGCTAAGTCAGTAGCGTTCGCCGTTGTGATCGGCG
34881 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TGCTTAAATTAAGCAGTCAATTTGCTTAGAATAGCAGTA
34956 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TATCGATAAGCCGGCCATTCACAGCGGCGTTGAATT
35028 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GTGATTGTTTCTTTCACTTGCTCACTCGGTAGCTGGC
35101 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACGATCAACAGCGGTTCATTTTGAAACAAGCCGGAATG
35175 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GCTGTGTTGTACATTCACTCAGGTGCAACCGCTTACGT
35249 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TGTCAACTCGATTACGCTCGCTGTCGCGCTGTGTGA
35321 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAACAACAGTTCGACAGAGCGGTAGCGATTCAGGCGG
35394 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACTTCTTTCGCCGCGAATATCTGGAGCAGGGTACGGCTCT
35470 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGTAACCTATCGCCGCCCCGCTAATGGCTCCCACA
35541 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CATTCCCAGCGCGCGTATCACGACTGCCGGCGTGAATT
35615 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTCACGACGCTGAAACAGGGCGGCATGCAAACCGAACGCA
35691 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GCCGATAACGACTGGAGGCTCGTGCAGGTGGCGAGTC
35764 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTCGCCAACTCTCCGTCTGTTCAATCGGGCGCCGAA
35836 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGTCCCAGCGGGTCCCGTCGATTTCGACAATCGCGTGC
35910 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGGATATCGACGGCGCGCGGATGAAGCGCTGGGTCGAGG
35985 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CTGAGTTCGCCGACCTGTTGATCCGGCCATTCACC
36056 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGACTAAGCCGAAAGAGATTACTCGCGTGCCGCTCGCTGC
36133 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAGGGTCTCGTCAGCCAAACCGAGCGATTGGAACCCGCG
36208 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCATTAAGCGTTCACCAGATAGCCAAAGAGGTCCACGGT
36283 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACAGAAAACGTCGCGACGGGCGCGGGCACCGACATT
36355 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTGATTGCTTCCTGCATTCGGGCCGGCCAGTAATCAG
36428 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GCCCGCACGCCTTCGAGGGCGCAGGCTTTGCCCGTC
36500 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTCACAAAATCGACGTCATCTGGGCTGAGGACGCTGATTA
36576 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGCAGGTGGACTCTGAAAGTTTCAGCGCATCATCA
36648 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AATTTCATTATAACGGCTTTCTCATTCCGGAATTTGCA
36722 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGTCACCAAAGACGTGCGCCCACAACGAAAGCGG
36793 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGATTGCCGGCGGGACGTGAAGCGGGATAGTGGCCGTTAC
36869 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCAAAACAAATCCTTGACCCCGAAACGATTCAAGGT
36941 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AGTCGCGTCGGTTTGACGGAAACCATCAAAAGCACG
37013 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CCGAGCATTTGAAAGATTTGACCGCGCCGTCGCTTGAC
37087 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATCGAAAGCGAGCAAAGCATTAAGAAGGGGCTTGCTGGT
37162 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TAATAGCTGCCAATGGAAAAACTGGACAAGCGCTTT
37234 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC CGAAGTCGTGCGACATTGAGCGGCGGGTTTGTTGGGG
37307 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAAAGCGGACCACTGTAAAAATCCTGCCCTGTATCGGC
37381 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GCGCAAATACTGGTCGGACCGCGATCCACGTAGGGTAA
37455 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC GGAAAATATCTGCCCCAATTGCCTGCCAATTTGCA
37526 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ACGGAAAACATCGGGACCGGCGCGGGCACTGACCTGA
37599 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC TTATTCAGGCGCGCGGATTTTCGCTCAATGACGTAG
37671 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC ATGGACAAGGCGTTGACCTGCGCATTGCGAAAATG
37742 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCAC AAGTCGCGCGCGAGATCCGCCGCCATCGCGAGTTTGT
37815 GTGTGAATTCCGATGATGCCGAAAGGCGTTGAGCA -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F296718 , F332264 , F455818