F331730

General Info

Members Datasets Scaffolds Average Seq Length
220 123 440 331

Family's Representative Sequence

Representative Sequence 3300002737|JGI25162J39368_1002966|JGI25162J39368_10029664
Length 332
Sequence MKKVATGLCLALSMLSATSAAQSAESRPAILYDMGGKFDKSFNENAFNGMDRFRKETGVKVAEFEINREAEREQALRTFARQGASPIVVVGFAWSLPLKKVAAQYPDEKFVIVDSTVDEPNVRSIQFAYHEAAFVVGALAGLKSKTGTVGFIGGMDIPIIRSFECGYASGARYTAPQIKIIENMTGATPAAWTDPARARELALSQFDQGADIIFGAAGASTMGVLQAAADAKKLAIGVGTNQNGLHPGSILASATAYIDTAVYQSLKDAESGDWKGGTKVLGIKDKGVGWSLDDNNRPLLNTDDIARVKQVEADISAGKITAPNYLTSNKCE

Samples

Sample ID Description Type Environment
1 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
54 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
55 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
69 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
70 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
76 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
77 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
118 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
122 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
123 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.09
Metatranscriptomes 0
Isolates 0.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.27
Nodule 0
Rhizoplane 0.45
Rhizosphere 95.91
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1002966 3300002737 Bacteria 5662
2 JGI25165J46597_1000572 3300003214 Bacteria 32875
3 Ga0070683_100041886 3300005329 Bacteria 4215
4 Ga0070689_100398651 3300005340 Bacteria 1163
5 Ga0070701_10083336 3300005438 Bacteria 1736
6 Ga0070705_100008252 3300005440 Bacteria 5154
7 Ga0070705_100132227 3300005440 Bacteria 1629
8 Ga0070700_100036248 3300005441 Bacteria 2990
9 Ga0070662_100003442 3300005457 Bacteria 9865
10 Ga0070706_100062952 3300005467 Bacteria 3428
11 Ga0070707_100212323 3300005468 Bacteria 1886
12 Ga0070699_100405653 3300005518 Bacteria 1233
13 Ga0070679_100020080 3300005530 Bacteria 6511
14 Ga0070679_100047110 3300005530 Bacteria 4298
15 Ga0070686_100062015 3300005544 Bacteria 2418
16 Ga0070686_100108919 3300005544 Bacteria 1884
17 Ga0068856_100060841 3300005614 Bacteria 3730
18 Ga0068852_100628585 3300005616 Bacteria 1080
19 Ga0068859_100019185 3300005617 Bacteria 6869
20 Ga0068864_100222871 3300005618 Bacteria 1740
21 Ga0068864_100222957 3300005618 Bacteria 1740
22 Ga0068862_100009853 3300005844 Bacteria 7891
23 Ga0070717_10000110 3300006028 Bacteria 64702
24 Ga0075428_100000434 3300006844 Bacteria 41550
25 Ga0075428_100357179 3300006844 Bacteria 1568
26 Ga0075430_100000421 3300006846 Bacteria 31581
27 Ga0075430_100036527 3300006846 Bacteria 4165
28 Ga0075431_100004097 3300006847 Bacteria 14230
29 Ga0075431_100062341 3300006847 Bacteria 3847
30 Ga0075433_10001207 3300006852 Bacteria 18832
31 Ga0075433_10212011 3300006852 Bacteria 1721
32 Ga0075434_100000021 3300006871 Bacteria 71555
33 Ga0075434_100099036 3300006871 Bacteria 2920
34 Ga0075429_100000553 3300006880 Bacteria 28584
35 Ga0075429_100026514 3300006880 Bacteria 5033
36 Ga0097620_100019188 3300006931 Bacteria 6869
37 Ga0075435_100297644 3300007076 Bacteria 1379
38 Ga0099794_10050673 3300007265 Bacteria 1997
39 Ga0099794_10149914 3300007265 Bacteria 1183
40 Ga0111539_10086642 3300009094 Bacteria 3680
41 Ga0111539_10445785 3300009094 Bacteria 1507
42 Ga0105245_10563407 3300009098 Bacteria 1162
43 Ga0114129_10017718 3300009147 Bacteria 10142
44 Ga0114129_10024242 3300009147 Bacteria 8597
45 Ga0114129_10067481 3300009147 Bacteria 4989
46 Ga0114129_10093665 3300009147 Bacteria 4161
47 Ga0114129_10180292 3300009147 Bacteria 2874
48 Ga0114129_10477726 3300009147 Bacteria 1631
49 Ga0105249_10045723 3300009553 Bacteria 3982
50 Ga0157369_10236182 3300013105 Bacteria 1910
51 Ga0163163_10205029 3300014325 Bacteria 2020
52 Ga0163163_10387305 3300014325 Bacteria 1456
53 Ga0163163_10582517 3300014325 Unclassified 1182
54 Ga0157380_10065056 3300014326 Bacteria 2929
55 Ga0209437_100222 3300025233 Bacteria 103719
56 Ga0209233_1000127 3300025261 Bacteria 213026
57 Ga0207707_10196504 3300025912 Bacteria 1759
58 Ga0207662_10048410 3300025918 Bacteria 2518
59 Ga0207652_10013774 3300025921 Bacteria 6540
60 Ga0207646_10255406 3300025922 Bacteria 1584
61 Ga0207646_10298235 3300025922 Bacteria 1456
62 Ga0207659_10166987 3300025926 Bacteria 1733
63 Ga0207659_10259977 3300025926 Bacteria 1412
64 Ga0207706_10000833 3300025933 Bacteria 32010
65 Ga0207670_10228516 3300025936 Bacteria 1428
66 Ga0207661_10039183 3300025944 Bacteria 3718
67 Ga0207661_10048667 3300025944 Bacteria 3371
68 Ga0207712_10029329 3300025961 Bacteria 3690
69 Ga0207712_10150157 3300025961 Bacteria 1799
70 Ga0207703_10178492 3300026035 Bacteria 1873
71 Ga0207708_10213531 3300026075 Bacteria 1543
72 Ga0207675_100112117 3300026118 Bacteria 2574
73 Ga0268265_10025959 3300028380 Bacteria 4164
74 Ga0265337_1018760 3300028556 Bacteria 2191
75 Ga0265319_1000206 3300028563 Bacteria 44786
76 Ga0265319_1003996 3300028563 Bacteria 7479
77 Ga0265319_1004176 3300028563 Bacteria 7234
78 Ga0265318_10000485 3300028577 Bacteria 29338
79 Ga0265323_10000585 3300028653 Bacteria 20097
80 Ga0265323_10002981 3300028653 Bacteria 7562
81 Ga0265323_10013361 3300028653 Bacteria 3275
82 Ga0265322_10000230 3300028654 Bacteria 24380
83 Ga0265324_10026791 3300029957 Bacteria 2039
84 Ga0265330_10007807 3300031235 Bacteria 5193
85 Ga0265320_10000113 3300031240 Bacteria 70098
86 Ga0265320_10000301 3300031240 Bacteria 40337
87 Ga0265320_10004589 3300031240 Bacteria 9026
88 Ga0265329_10011821 3300031242 Bacteria 3162
89 Ga0265331_10006270 3300031250 Bacteria 7050
90 Ga0265327_10000037 3300031251 Bacteria 293502
91 Ga0265327_10001711 3300031251 Bacteria 26125
92 Ga0265327_10002620 3300031251 Bacteria 18592
93 Ga0265327_10013380 3300031251 Bacteria 5450
94 Ga0265327_10085215 3300031251 Bacteria 1552
95 Ga0265316_10002346 3300031344 Bacteria 19739
96 Ga0265316_10010349 3300031344 Bacteria 8506
97 Ga0265316_10119271 3300031344 Bacteria 1993
98 Ga0265313_10002806 3300031595 Bacteria 14702
99 Ga0265313_10015878 3300031595 Bacteria 4357
100 Ga0265313_10041341 3300031595 Bacteria 2272
101 Ga0265313_10082778 3300031595 Bacteria 1454
102 Ga0307508_10000283 3300031616 Bacteria 62443
103 Ga0265314_10012722 3300031711 Bacteria 6840
104 Ga0265314_10117047 3300031711 Bacteria 1684
105 Ga0265342_10002062 3300031712 Bacteria 17842
106 Ga0265342_10037899 3300031712 Bacteria 2938
107 Ga0307414_10415350 3300032004 Unclassified 1172
108 Ga0373940_0006008 3300035088 Bacteria 2666
109 Ga0373949_0031433 3300035090 Bacteria 1266
110 Ga0373962_0009210 3300035242 Bacteria 2441
111 Ga0373931_0046035 3300035691 Bacteria 2305
112 Ga0395900_0008014 3300037418 Bacteria 10870
113 Ga0395898_0003919 3300037466 Bacteria 16430
114 Ga0395901_0044388 3300038443 Bacteria 4610
115 Ga0436361_0684730 3300039447 Bacteria 6512
116 Ga0466972_0000313 3300044658 Bacteria 27954
117 Ga0453683_0000226 3300044673 Bacteria 75571
118 Ga0466965_0007158 3300044683 Bacteria 5112
119 Ga0466966_0038962 3300044684 Bacteria 3061
120 Ga0453684_0056721 3300044712 Bacteria 5078
121 Ga0453684_0085337 3300044712 Bacteria 3923
122 Ga0466960_0115999 3300044901 Bacteria 1397
123 Ga0466959_0189969 3300045049 Bacteria 1434
124 Ga0451576_0138641 3300045051 Bacteria 2537
125 Ga0451576_0172138 3300045051 Bacteria 2260
126 Ga0451576_0227226 3300045051 Bacteria 1949
127 Ga0451576_0228178 3300045051 Bacteria 1944
128 Ga0451576_0269407 3300045051 Bacteria 1780
129 Ga0496107_0242654 3300048910 Bacteria 1341
130 Ga0501031_0002144 3300049568 Bacteria 12443
131 Ga0501031_0080809 3300049568 Bacteria 2119
132 Ga0501032_0000823 3300049569 Bacteria 25228
133 Ga0501033_0000585 3300049570 Bacteria 33747
134 Ga0501033_0034439 3300049570 Bacteria 3799
135 Ga0501036_0014454 3300049572 Bacteria 6577
136 Ga0501037_0006781 3300049573 Bacteria 8372
137 Ga0501038_0127029 3300049574 Bacteria 2098
138 Ga0501039_0004129 3300049575 Bacteria 10919
139 Ga0501039_0053500 3300049575 Bacteria 3124
140 Ga0501040_0001328 3300049576 Bacteria 15633
141 Ga0501040_0024826 3300049576 Bacteria 4026
142 Ga0501040_0194133 3300049576 Bacteria 1441
143 Ga0501041_0000838 3300049577 Bacteria 16518
144 Ga0501042_0000609 3300049578 Bacteria 19026
145 Ga0501042_0063366 3300049578 Bacteria 2642
146 Ga0501046_0000692 3300049580 Bacteria 32742
147 Ga0501046_0004597 3300049580 Bacteria 12463
148 Ga0501046_0010671 3300049580 Bacteria 7878
149 Ga0501046_0012988 3300049580 Bacteria 7070
150 Ga0501046_0143706 3300049580 Bacteria 1803
151 Ga0501046_0283983 3300049580 Bacteria 1212
152 Ga0501047_0018141 3300049581 Bacteria 6743
153 Ga0501047_0040489 3300049581 Bacteria 4507
154 Ga0501047_0080807 3300049581 Bacteria 3125
155 Ga0501047_0112074 3300049581 Bacteria 2610
156 Ga0501048_0011887 3300049582 Bacteria 6491
157 Ga0501048_0054039 3300049582 Bacteria 2853
158 Ga0501048_0081558 3300049582 Bacteria 2282
159 Ga0501070_0056953 3300049586 Bacteria 3240
160 Ga0501071_0000886 3300049587 Bacteria 16187
161 Ga0501072_0005761 3300049588 Bacteria 9432
162 Ga0501072_0112655 3300049588 Bacteria 2166
163 Ga0501072_0139009 3300049588 Bacteria 1936
164 Ga0501072_0349325 3300049588 Bacteria 1174
165 Ga0501075_0000022 3300049591 Bacteria 64965
166 Ga0501075_0000545 3300049591 Bacteria 22858
167 Ga0501075_0055809 3300049591 Bacteria 2973
168 Ga0501075_0061218 3300049591 Bacteria 2836
169 Ga0501076_0000064 3300049592 Bacteria 53698
170 Ga0501076_0002421 3300049592 Bacteria 12791
171 Ga0501076_0364394 3300049592 Bacteria 1187
172 Ga0501077_0000939 3300049593 Bacteria 17570
173 Ga0501077_0028165 3300049593 Bacteria 3570
174 Ga0501079_0003102 3300049741 Bacteria 12170
175 Ga0501079_0018791 3300049741 Bacteria 5281
176 Ga0501079_0070341 3300049741 Bacteria 2702
177 Ga0501079_0230437 3300049741 Bacteria 1447
178 Ga0501080_0009193 3300049742 Bacteria 9003
179 Ga0501080_0016447 3300049742 Bacteria 6830
180 Ga0501081_0001969 3300049743 Bacteria 12789
181 Ga0501081_0036088 3300049743 Bacteria 3369
182 Ga0501083_0075521 3300049744 Bacteria 2238
183 Ga0501035_0020708 3300049822 Bacteria 6045
184 Ga0501035_0027331 3300049822 Bacteria 5215
185 Ga0501035_0062243 3300049822 Bacteria 3321
186 Ga0501044_0000200 3300049823 Bacteria 75710
187 Ga0501044_0008097 3300049823 Bacteria 11536
188 Ga0501045_0067890 3300049824 Bacteria 2619
189 nmdc:mga05p37_19550_c1 3300050507 Bacteria 8193
190 nmdc:mga05p37_399493_c1 3300050507 Bacteria 1605
191 nmdc:mga05p37_41410_c1 3300050507 Bacteria 5655
192 nmdc:mga05p37_61143_c1 3300050507 Bacteria 4637
193 nmdc:mga05p37_67095_c1 3300050507 Bacteria 4414
194 nmdc:mga05p37_8441_c1 3300050507 Bacteria 12184
195 nmdc:mga09592_2305_c1 3300050508 Bacteria 15399
196 nmdc:mga09592_529_c1 3300050508 Bacteria 28853
197 nmdc:mga0qj67_16263_c1 3300050509 Bacteria 5639
198 nmdc:mga0qj67_26652_c1 3300050509 Bacteria 4475
199 nmdc:mga06r32_673_c1 3300050510 Bacteria 29768
200 nmdc:mga0n895_372307_c1 3300050512 Bacteria 1446
201 nmdc:mga0n895_472141_c1 3300050512 Bacteria 1265
202 nmdc:mga0n895_48338_c1 3300050512 Bacteria 4164
203 nmdc:mga0n895_661641_c1 3300050512 Bacteria 1042
204 nmdc:mga0n895_6826_c1 3300050512 Bacteria 9746
205 nmdc:mga0rr50_192484_c1 3300050513 Bacteria 1672
206 nmdc:mga0rr50_24064_c1 3300050513 Bacteria 4213
207 nmdc:mga0a205_290551_c1 3300050515 Bacteria 1509
208 nmdc:mga0a205_6783_c1 3300050515 Bacteria 10357
209 Ga0500651_0248122 3300053093 Bacteria 1036
210 Ga0501084_0001195 3300054114 Bacteria 20331
211 Ga0501084_0003617 3300054114 Bacteria 12552
212 Ga0501084_0020484 3300054114 Bacteria 5515
213 Ga0501084_0056869 3300054114 Bacteria 3273
214 Ga0501082_0003709 3300060353 Bacteria 13348
215 Ga0501082_0011513 3300060353 Bacteria 7614
216 Ga0501082_0180810 3300060353 Bacteria 1834
217 Ga0530510_0000064 3300061734 Bacteria 52546
218 Ga0530510_0000961 3300061734 Bacteria 19025
219 2523467764 2523231067 Bacteria 5230452
220 2897803718 2897803580 Bacteria 7000062
221 JGI25162J39368_1002966
222 JGI25165J46597_1000572
223 Ga0070683_100041886
224 Ga0070689_100398651
225 Ga0070701_10083336
226 Ga0070705_100008252
227 Ga0070705_100132227
228 Ga0070700_100036248
229 Ga0070662_100003442
230 Ga0070706_100062952
231 Ga0070707_100212323
232 Ga0070699_100405653
233 Ga0070679_100020080
234 Ga0070679_100047110
235 Ga0070686_100062015
236 Ga0070686_100108919
237 Ga0068856_100060841
238 Ga0068852_100628585
239 Ga0068859_100019185
240 Ga0068864_100222871
241 Ga0068864_100222957
242 Ga0068862_100009853
243 Ga0070717_10000110
244 Ga0075428_100000434
245 Ga0075428_100357179
246 Ga0075430_100000421
247 Ga0075430_100036527
248 Ga0075431_100004097
249 Ga0075431_100062341
250 Ga0075433_10001207
251 Ga0075433_10212011
252 Ga0075434_100000021
253 Ga0075434_100099036
254 Ga0075429_100000553
255 Ga0075429_100026514
256 Ga0097620_100019188
257 Ga0075435_100297644
258 Ga0099794_10050673
259 Ga0099794_10149914
260 Ga0111539_10086642
261 Ga0111539_10445785
262 Ga0105245_10563407
263 Ga0114129_10017718
264 Ga0114129_10024242
265 Ga0114129_10067481
266 Ga0114129_10093665
267 Ga0114129_10180292
268 Ga0114129_10477726
269 Ga0105249_10045723
270 Ga0157369_10236182
271 Ga0163163_10205029
272 Ga0163163_10387305
273 Ga0163163_10582517
274 Ga0157380_10065056
275 Ga0209437_100222
276 Ga0209233_1000127
277 Ga0207707_10196504
278 Ga0207662_10048410
279 Ga0207652_10013774
280 Ga0207646_10255406
281 Ga0207646_10298235
282 Ga0207659_10166987
283 Ga0207659_10259977
284 Ga0207706_10000833
285 Ga0207670_10228516
286 Ga0207661_10039183
287 Ga0207661_10048667
288 Ga0207712_10029329
289 Ga0207712_10150157
290 Ga0207703_10178492
291 Ga0207708_10213531
292 Ga0207675_100112117
293 Ga0268265_10025959
294 Ga0265337_1018760
295 Ga0265319_1000206
296 Ga0265319_1003996
297 Ga0265319_1004176
298 Ga0265318_10000485
299 Ga0265323_10000585
300 Ga0265323_10002981
301 Ga0265323_10013361
302 Ga0265322_10000230
303 Ga0265324_10026791
304 Ga0265330_10007807
305 Ga0265320_10000113
306 Ga0265320_10000301
307 Ga0265320_10004589
308 Ga0265329_10011821
309 Ga0265331_10006270
310 Ga0265327_10000037
311 Ga0265327_10001711
312 Ga0265327_10002620
313 Ga0265327_10013380
314 Ga0265327_10085215
315 Ga0265316_10002346
316 Ga0265316_10010349
317 Ga0265316_10119271
318 Ga0265313_10002806
319 Ga0265313_10015878
320 Ga0265313_10041341
321 Ga0265313_10082778
322 Ga0307508_10000283
323 Ga0265314_10012722
324 Ga0265314_10117047
325 Ga0265342_10002062
326 Ga0265342_10037899
327 Ga0307414_10415350
328 Ga0373940_0006008
329 Ga0373949_0031433
330 Ga0373962_0009210
331 Ga0373931_0046035
332 Ga0395900_0008014
333 Ga0395898_0003919
334 Ga0395901_0044388
335 Ga0436361_0684730
336 Ga0466972_0000313
337 Ga0453683_0000226
338 Ga0466965_0007158
339 Ga0466966_0038962
340 Ga0453684_0056721
341 Ga0453684_0085337
342 Ga0466960_0115999
343 Ga0466959_0189969
344 Ga0451576_0138641
345 Ga0451576_0172138
346 Ga0451576_0227226
347 Ga0451576_0228178
348 Ga0451576_0269407
349 Ga0496107_0242654
350 Ga0501031_0002144
351 Ga0501031_0080809
352 Ga0501032_0000823
353 Ga0501033_0000585
354 Ga0501033_0034439
355 Ga0501036_0014454
356 Ga0501037_0006781
357 Ga0501038_0127029
358 Ga0501039_0004129
359 Ga0501039_0053500
360 Ga0501040_0001328
361 Ga0501040_0024826
362 Ga0501040_0194133
363 Ga0501041_0000838
364 Ga0501042_0000609
365 Ga0501042_0063366
366 Ga0501046_0000692
367 Ga0501046_0004597
368 Ga0501046_0010671
369 Ga0501046_0012988
370 Ga0501046_0143706
371 Ga0501046_0283983
372 Ga0501047_0018141
373 Ga0501047_0040489
374 Ga0501047_0080807
375 Ga0501047_0112074
376 Ga0501048_0011887
377 Ga0501048_0054039
378 Ga0501048_0081558
379 Ga0501070_0056953
380 Ga0501071_0000886
381 Ga0501072_0005761
382 Ga0501072_0112655
383 Ga0501072_0139009
384 Ga0501072_0349325
385 Ga0501075_0000022
386 Ga0501075_0000545
387 Ga0501075_0055809
388 Ga0501075_0061218
389 Ga0501076_0000064
390 Ga0501076_0002421
391 Ga0501076_0364394
392 Ga0501077_0000939
393 Ga0501077_0028165
394 Ga0501079_0003102
395 Ga0501079_0018791
396 Ga0501079_0070341
397 Ga0501079_0230437
398 Ga0501080_0009193
399 Ga0501080_0016447
400 Ga0501081_0001969
401 Ga0501081_0036088
402 Ga0501083_0075521
403 Ga0501035_0020708
404 Ga0501035_0027331
405 Ga0501035_0062243
406 Ga0501044_0000200
407 Ga0501044_0008097
408 Ga0501045_0067890
409 nmdc:mga05p37_19550_c1
410 nmdc:mga05p37_399493_c1
411 nmdc:mga05p37_41410_c1
412 nmdc:mga05p37_61143_c1
413 nmdc:mga05p37_67095_c1
414 nmdc:mga05p37_8441_c1
415 nmdc:mga09592_2305_c1
416 nmdc:mga09592_529_c1
417 nmdc:mga0qj67_16263_c1
418 nmdc:mga0qj67_26652_c1
419 nmdc:mga06r32_673_c1
420 nmdc:mga0n895_372307_c1
421 nmdc:mga0n895_472141_c1
422 nmdc:mga0n895_48338_c1
423 nmdc:mga0n895_661641_c1
424 nmdc:mga0n895_6826_c1
425 nmdc:mga0rr50_192484_c1
426 nmdc:mga0rr50_24064_c1
427 nmdc:mga0a205_290551_c1
428 nmdc:mga0a205_6783_c1
429 Ga0500651_0248122
430 Ga0501084_0001195
431 Ga0501084_0003617
432 Ga0501084_0020484
433 Ga0501084_0056869
434 Ga0501082_0003709
435 Ga0501082_0011513
436 Ga0501082_0180810
437 Ga0530510_0000064
438 Ga0530510_0000961
439 2523467764
440 2897803718

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02608

Bmp

ABC transporter substrate-binding protein PnrA-like

28

324

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ycs-assembly5.cif.gz_E crystal structure of putative lipoprotein from peptoclostridium difficile 630 (fragment) 0.892 25 126
2hqb-assembly1.cif.gz_A crystal structure of a transcriptional activator of comk gene from bacillus halodurans 0.8507 28 330
7x0r-assembly1.cif.gz_A crystal structure of substrate binding protein lbp complexed wtih guanosine from clostridium thermocellum 0.8383 27 324
2hqb-assembly1.cif.gz_A crystal structure of a transcriptional activator of comk gene from bacillus halodurans 0.837 28 330
6pi5-assembly4.cif.gz_D the evolving story of atzt, a periplasmic binding protein 0.8311 25 322
ID Description Score Start End Superfamily
4pevC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9258 27 127 3.40.50.2300
3s99A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.882 129 322 3.40.50.2300
4iilA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8742 129 323 3.40.50.2300
4iilA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8649 129 323 3.40.50.2300
2fqwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8589 129 323 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A0S2SMB5-F1-model_v4 Periplasmic component/surface lipoprotein 0.9635 140 332 GO:0005886
AF-A0A7W2BS74-F1-model_v4 deleted 0.9492 186 332
AF-A0A0S2SMB5-F1-model_v4 Periplasmic component/surface lipoprotein 0.9492 140 332 GO:0005886
AF-A0A7V9UX56-F1-model_v4 BMP family ABC transporter substrate-binding protein 0.9487 139 324 GO:0005886
AF-A0A7W1SKT8-F1-model_v4 BMP family ABC transporter substrate-binding protein 0.9328 125 324 GO:0005886

Map