F330280

General Info

Members Datasets Scaffolds Average Seq Length
218 143 207 191

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0076873|Ga0451576_0076873_1134_1796
Length 220
Sequence MAAKVGAGEATALQGGRANNALLAVADGGTVPPAGRCPWCGDDPLYVAYHDDEWGVPCHDERTLFEFLILEGAQAGLSWITILRKRENYRRAFDAFDAQKIACYGDKDVARLLADAGIVRNRLKIAAAIDNARATLALYEAGGSLDDLFWQFVDGRPVINRWKRLDQVPVHTPAAEALSKELKQRGFRFVGPTVIYSHMQATGMVNDHLVSCPRHKALGG

Samples

Sample ID Description Type Environment
1 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
2 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
3 2643221645 Massilia sp. Root351 Isolate Unclassified
4 2643221664 Massilia sp. Root418 Isolate Unclassified
5 2738541280 Massilia sp. GV090 Isolate Unclassified
6 2738541300 Massilia sp. GV016 Isolate Unclassified
7 2738543018 Massilia sp. GV045 Isolate Unclassified
8 2738543030 Massilia sp. GV097 Isolate Unclassified
9 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
10 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
11 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
16 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
31 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
49 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
52 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
53 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
54 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
55 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
58 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
59 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
64 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
65 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
66 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
82 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
86 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
87 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
88 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
92 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
93 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
94 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
95 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
111 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
112 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
119 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
127 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
130 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.5
Metatranscriptomes 0.46
Isolates 5.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.42
Nodule 0
Rhizoplane 3.21
Rhizosphere 87.16
Stem 0
Stem Tuber 0
Unclassified 3.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1020302 3300003771 Bacteria 2372
2 Ga0055537_1000139 3300003773 Bacteria 54248
3 Ga0055524_1007245 3300003775 Bacteria 4737
4 Ga0055534_1000888 3300003784 Bacteria 13603
5 Ga0055528_1001156 3300003790 Bacteria 17098
6 Ga0065165_1000590 3300005262 Bacteria 53214
7 Ga0070714_101226207 3300005435 Bacteria 732
8 Ga0070681_10789955 3300005458 Bacteria 866
9 Ga0070707_100023880 3300005468 Bacteria 5784
10 Ga0070707_100090841 3300005468 Bacteria 2956
11 Ga0068852_100690293 3300005616 Bacteria 1030
12 Ga0068864_100576863 3300005618 Bacteria 1089
13 Ga0081455_10163462 3300005937 Bacteria 1703
14 Ga0075431_101155011 3300006847 Bacteria 738
15 Ga0105250_10025559 3300009092 Bacteria 2379
16 Ga0105242_11496053 3300009176 Bacteria 706
17 Ga0105239_10033637 3300010375 Bacteria 5629
18 Ga0163161_10058037 3300017792 Bacteria 2813
19 Ga0213872_10000005 3300021361 Bacteria 290165
20 Ga0213872_10000230 3300021361 Bacteria 49136
21 Ga0213872_10004908 3300021361 Bacteria 6968
22 Ga0213872_10030418 3300021361 Bacteria 2475
23 Ga0209436_114106 3300025208 Bacteria 1284
24 Ga0209565_1000055 3300025263 Bacteria 201184
25 Ga0209673_1000040 3300025273 Bacteria 312633
26 Ga0209130_1000195 3300025284 Bacteria 83371
27 Ga0209675_1000052 3300025291 Bacteria 201332
28 Ga0209564_1000121 3300025295 Bacteria 204081
29 Ga0209256_1000054 3300025299 Bacteria 298431
30 Ga0209256_1000100 3300025299 Bacteria 201246
31 Ga0207696_1053682 3300025711 Bacteria 1146
32 Ga0207684_10071703 3300025910 Bacteria 2943
33 Ga0207646_10023343 3300025922 Bacteria 5683
34 Ga0207646_10108058 3300025922 Bacteria 2496
35 Ga0207428_10024048 3300027907 Bacteria 5116
36 Ga0265336_10113256 3300028666 Bacteria 808
37 Ga0265338_10068361 3300028800 Unclassified 3061
38 Ga0265762_1037114 3300030760 Bacteria 943
39 Ga0265327_10005040 3300031251 Bacteria 11291
40 Ga0265327_10031593 3300031251 Bacteria 2972
41 Ga0307408_100000312 3300031548 Bacteria 46592
42 Ga0265314_10003573 3300031711 Bacteria 14976
43 Ga0316576_10002774 3300031727 Bacteria 10062
44 Ga0316576_10025686 3300031727 Bacteria 4126
45 Ga0316576_10073243 3300031727 Bacteria 2530
46 Ga0316576_10076068 3300031727 Bacteria 2484
47 Ga0316578_10122226 3300031728 Bacteria 1565
48 Ga0316578_10466652 3300031728 Unclassified 745
49 Ga0316577_10075557 3300031733 Bacteria 1881
50 Ga0316577_10419416 3300031733 Bacteria 760
51 Ga0307414_10026021 3300032004 Bacteria 3759
52 Ga0316580_10002381 3300032139 Bacteria 5157
53 Ga0373949_0087218 3300035090 Bacteria 839
54 Ga0373932_0094620 3300035112 Bacteria 964
55 Ga0373941_0253045 3300035115 Bacteria 688
56 Ga0316574_0138767 3300035398 Unclassified 1566
57 Ga0316574_0179685 3300035398 Bacteria 1361
58 Ga0316574_0312975 3300035398 Unclassified 997
59 Ga0316574_0493643 3300035398 Bacteria 764
60 Ga0373931_0439931 3300035691 Bacteria 832
61 Ga0373933_0514407 3300035724 Bacteria 785
62 Ga0316582_0055759 3300036647 Bacteria 2520
63 Ga0316582_0149602 3300036647 Bacteria 1578
64 Ga0316584_0001442 3300036712 Bacteria 14252
65 Ga0316584_0108684 3300036712 Bacteria 2075
66 Ga0316584_0381400 3300036712 Bacteria 1007
67 Ga0395899_0003811 3300037312 Bacteria 11910
68 Ga0395900_0449301 3300037418 Bacteria 1245
69 Ga0395901_0032110 3300038443 Bacteria 5417
70 Ga0436361_0085135 3300039447 Bacteria 33261
71 Ga0436361_0089479 3300039447 Bacteria 55221
72 Ga0436361_0465236 3300039447 Bacteria 12354
73 Ga0436361_0700785 3300039447 Bacteria 4349
74 Ga0436361_0915871 3300039447 Bacteria 7452
75 Ga0451797_0345526 3300041453 Bacteria 2648
76 Ga0450904_000023 3300042139 Bacteria 36559
77 Ga0450918_001672 3300042531 Bacteria 4349
78 Ga0451577_0000676 3300042876 Bacteria 53730
79 Ga0453683_0049841 3300044673 Bacteria 2624
80 Ga0453683_0381779 3300044673 Bacteria 907
81 Ga0466965_0005832 3300044683 Bacteria 5558
82 Ga0453684_0000005 3300044712 Bacteria 1431632
83 Ga0453684_0008907 3300044712 Bacteria 17767
84 Ga0453684_0055560 3300044712 Bacteria 5146
85 Ga0466968_0008926 3300044735 Bacteria 3848
86 Ga0466970_0006356 3300044765 Bacteria 5904
87 Ga0466959_0002610 3300045049 Bacteria 11572
88 Ga0451576_0000227 3300045051 Bacteria 137818
89 Ga0451576_0001593 3300045051 Bacteria 38143
90 Ga0451576_0030579 3300045051 Bacteria 5754
91 Ga0451576_0044361 3300045051 Unclassified 4687
92 Ga0451576_0076873 3300045051 Bacteria 3475
93 Ga0451576_0135601 3300045051 Bacteria 2567
94 Ga0495603_0041864 3300046455 Bacteria 2739
95 Ga0495590_0070045 3300046457 Bacteria 1230
96 Ga0495629_0016088 3300046459 Bacteria 5373
97 Ga0495629_0720264 3300046459 Bacteria 662
98 Ga0495638_0073937 3300046460 Bacteria 2079
99 Ga0495651_0006368 3300046462 Bacteria 9033
100 Ga0495650_0000307 3300046471 Bacteria 88863
101 Ga0495582_0027637 3300046473 Bacteria 3111
102 Ga0495584_0007940 3300046491 Bacteria 5518
103 Ga0495584_0086712 3300046491 Bacteria 1577
104 Ga0495585_0000660 3300046492 Bacteria 31723
105 Ga0495585_0010565 3300046492 Bacteria 5492
106 Ga0495585_0118893 3300046492 Bacteria 1399
107 Ga0495585_0129842 3300046492 Bacteria 1327
108 Ga0495594_0018259 3300046499 Bacteria 3713
109 Ga0495596_0002635 3300046500 Bacteria 9499
110 Ga0495596_0011185 3300046500 Bacteria 3880
111 Ga0495607_0004071 3300046501 Bacteria 10949
112 Ga0495607_0029108 3300046501 Bacteria 3402
113 Ga0495607_0037727 3300046501 Bacteria 2900
114 Ga0495583_0023892 3300046506 Bacteria 3082
115 Ga0495606_0000090 3300046507 Bacteria 154737
116 Ga0495606_0001184 3300046507 Bacteria 36761
117 Ga0495606_0016201 3300046507 Bacteria 5695
118 Ga0495628_0001984 3300046516 Bacteria 18556
119 Ga0495630_0248317 3300046517 Bacteria 1359
120 Ga0495631_0003276 3300046518 Bacteria 8899
121 Ga0495631_0009826 3300046518 Bacteria 4762
122 Ga0495631_0015413 3300046518 Bacteria 3663
123 Ga0495643_0051061 3300046522 Bacteria 2225
124 Ga0495643_0061595 3300046522 Bacteria 1989
125 Ga0495644_0017184 3300046523 Bacteria 2767
126 Ga0495666_0003020 3300046526 Bacteria 8447
127 Ga0495666_0021745 3300046526 Bacteria 3175
128 Ga0495666_0027515 3300046526 Bacteria 2798
129 Ga0495642_0002800 3300046528 Bacteria 6980
130 Ga0495642_0051023 3300046528 Bacteria 1702
131 Ga0495652_0178000 3300046529 Bacteria 1635
132 Ga0495654_0086618 3300046530 Bacteria 1459
133 Ga0495665_0020269 3300046531 Bacteria 3573
134 Ga0495586_0025070 3300046535 Bacteria 3190
135 Ga0495586_0166009 3300046535 Bacteria 1246
136 Ga0495587_0021441 3300046536 Bacteria 3985
137 Ga0495609_0000738 3300046538 Bacteria 24861
138 Ga0495609_0005263 3300046538 Bacteria 6865
139 Ga0495597_0041578 3300046542 Bacteria 2052
140 Ga0495597_0045424 3300046542 Bacteria 1949
141 Ga0495645_0015994 3300046543 Bacteria 5348
142 Ga0495622_0027506 3300046557 Bacteria 2654
143 Ga0495622_0106081 3300046557 Bacteria 1287
144 Ga0495622_0145495 3300046557 Bacteria 1074
145 Ga0495622_0273189 3300046557 Bacteria 740
146 Ga0495633_0000353 3300046558 Bacteria 50204
147 Ga0495633_0019058 3300046558 Bacteria 3473
148 Ga0495633_0097289 3300046558 Bacteria 1367
149 Ga0495633_0107395 3300046558 Bacteria 1294
150 Ga0495667_0134261 3300046559 Bacteria 1596
151 Ga0495668_0015219 3300046616 Bacteria 4495
152 Ga0495668_0017709 3300046616 Bacteria 4127
153 Ga0495668_0115626 3300046616 Bacteria 1467
154 Ga0495611_0013811 3300046648 Bacteria 3443
155 Ga0495611_0088710 3300046648 Bacteria 1428
156 Ga0495625_0006070 3300046660 Bacteria 10844
157 Ga0495625_0011526 3300046660 Bacteria 7202
158 Ga0495659_0000055 3300046664 Bacteria 49804
159 Ga0495659_0000588 3300046664 Bacteria 13397
160 Ga0495661_0000539 3300046665 Bacteria 39123
161 Ga0495661_0058568 3300046665 Bacteria 2295
162 Ga0495588_0053840 3300046674 Bacteria 2075
163 Ga0495588_0162094 3300046674 Bacteria 1182
164 Ga0495646_0008976 3300046680 Bacteria 6346
165 Ga0495647_0135186 3300046681 Bacteria 1048
166 Ga0495669_0000176 3300046684 Bacteria 40422
167 Ga0495670_0000301 3300046691 Bacteria 23331
168 Ga0495670_0007427 3300046691 Bacteria 5380
169 Ga0495670_0280618 3300046691 Bacteria 891
170 Ga0495671_0000986 3300046692 Bacteria 19847
171 Ga0495671_0041077 3300046692 Bacteria 2330
172 Ga0495671_0202284 3300046692 Bacteria 963
173 Ga0495649_0016124 3300046694 Bacteria 4240
174 Ga0495589_0050504 3300046794 Bacteria 2057
175 Ga0495600_0337143 3300046809 Bacteria 946
176 Ga0495660_0021297 3300046810 Bacteria 3713
177 Ga0495660_0085380 3300046810 Bacteria 1649
178 Ga0495604_0216863 3300047317 Bacteria 1320
179 Ga0495636_0009251 3300047318 Bacteria 3879
180 Ga0495674_0004065 3300047319 Bacteria 14151
181 Ga0495672_0000013 3300047320 Bacteria 511827
182 Ga0495672_0000591 3300047320 Bacteria 40983
183 Ga0495676_0007739 3300047321 Bacteria 9859
184 Ga0495676_0057041 3300047321 Bacteria 3084
185 Ga0495676_0064522 3300047321 Bacteria 2847
186 Ga0495683_0152191 3300047323 Bacteria 1076
187 Ga0495675_0195263 3300047444 Bacteria 1234
188 Ga0495677_0019316 3300047445 Bacteria 2471
189 Ga0495679_002994 3300047446 Bacteria 8320
190 Ga0495673_0045330 3300047469 Bacteria 1955
191 Ga0495681_0000684 3300047470 Bacteria 25808
192 Ga0495681_0025422 3300047470 Bacteria 3098
193 Ga0495686_0026098 3300047472 Bacteria 3824
194 Ga0495686_0161797 3300047472 Bacteria 1307
195 Ga0495593_0010690 3300047673 Bacteria 5291
196 Ga0495602_0075385 3300048088 Bacteria 2863
197 Ga0495626_0026903 3300048091 Bacteria 2799
198 Ga0496100_0671847 3300048903 Bacteria 807
199 Ga0496104_0509374 3300048907 Bacteria 1115
200 Ga0496115_0003150 3300048918 Bacteria 11862
201 Ga0496115_0025763 3300048918 Bacteria 4583
202 Ga0496115_0896450 3300048918 Bacteria 684
203 Ga0495678_020762 3300049459 Bacteria 2902
204 Ga0501238_000159 3300049671 Bacteria 10482
205 Ga0501238_006928 3300049671 Bacteria 1467
206 nmdc:mga06r32_1113779_c1 3300050510 Bacteria 738
207 nmdc:mga08y16_5468_c1 3300050511 Bacteria 13283

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300036712 Ga0316584_0381400 Ga0316584_0381400_106_615 163
2 3300035090 Ga0373949_0087218 Ga0373949_0087218_163_690 171
3 3300044673 Ga0453683_0049841 Ga0453683_0049841_1630_2160 172
4 3300035398 Ga0316574_0312975 Ga0316574_0312975_359_910 174
5 3300041453 Ga0451797_0345526 Ga0451797_0345526_1174_1770 179
6 3300044712 Ga0453684_0008907 Ga0453684_0008907_2049_2612 180
7 3300044712 Ga0453684_0055560 Ga0453684_0055560_2049_2612 180
8 3300045051 Ga0451576_0044361 Ga0451576_0044361_2709_3272 180
9 iso_pu_bacteria 2600255292 2601672174 180
10 iso_pu_bacteria 2857547612 2857549206 180
11 iso_pu_bacteria 2885080285 2885083059 180
12 3300005458 Ga0070681_10789955 Ga0070681_107899552 182
13 3300006847 Ga0075431_101155011 Ga0075431_1011550112 182
14 3300028666 Ga0265336_10113256 Ga0265336_101132561 182
15 3300042876 Ga0451577_0000676 Ga0451577_0000676_21507_22073 182
16 3300044673 Ga0453683_0381779 Ga0453683_0381779_24_584 182
17 3300044712 Ga0453684_0000005 Ga0453684_0000005_592965_593531 182
18 3300047320 Ga0495672_0000013 Ga0495672_0000013_247736_248293 182
19 3300050510 nmdc:mga06r32_1113779_c1 nmdc:mga06r32_1113779_c1_54_638 182
20 3300005618 Ga0068864_100576863 Ga0068864_1005768631 183
21 3300046810 Ga0495660_0085380 Ga0495660_0085380_617_1177 183
22 3300047472 Ga0495686_0161797 Ga0495686_0161797_477_1037 183
23 iso_pu_bacteria 2511231026 2511383613 183
24 iso_pu_bacteria 2643221645 2644254680 183
25 iso_pu_bacteria 2643221664 2644360225 183
26 iso_pu_bacteria 2738541280 2738741862 183
27 iso_pu_bacteria 2738541300 2738845839 183
28 iso_pu_bacteria 2738543018 2739276735 183
29 iso_pu_bacteria 2738543030 2739345779 183
30 3300005468 Ga0070707_100090841 Ga0070707_1000908414 184
31 3300017792 Ga0163161_10058037 Ga0163161_100580373 184
32 3300025922 Ga0207646_10108058 Ga0207646_101080582 184
33 3300030760 Ga0265762_1037114 Ga0265762_10371142 184
34 3300032004 Ga0307414_10026021 Ga0307414_100260214 184
35 3300042531 Ga0450918_001672 Ga0450918_001672_1543_2118 184
36 3300045051 Ga0451576_0001593 Ga0451576_0001593_12619_13233 184
37 3300045051 Ga0451576_0030579 Ga0451576_0030579_1687_2265 184
38 3300045051 Ga0451576_0135601 Ga0451576_0135601_1642_2214 184
39 3300046455 Ga0495603_0041864 Ga0495603_0041864_2134_2697 184
40 3300046459 Ga0495629_0016088 Ga0495629_0016088_4601_5164 184
41 3300046459 Ga0495629_0720264 Ga0495629_0720264_30_593 184
42 3300046462 Ga0495651_0006368 Ga0495651_0006368_7969_8541 184
43 3300046473 Ga0495582_0027637 Ga0495582_0027637_1231_1794 184
44 3300046491 Ga0495584_0007940 Ga0495584_0007940_3098_3673 184
45 3300046491 Ga0495584_0086712 Ga0495584_0086712_738_1313 184
46 3300046492 Ga0495585_0000660 Ga0495585_0000660_12337_12912 184
47 3300046492 Ga0495585_0010565 Ga0495585_0010565_3677_4240 184
48 3300046492 Ga0495585_0118893 Ga0495585_0118893_276_839 184
49 3300046492 Ga0495585_0129842 Ga0495585_0129842_710_1285 184
50 3300046499 Ga0495594_0018259 Ga0495594_0018259_17_580 184
51 3300046500 Ga0495596_0002635 Ga0495596_0002635_3558_4133 184
52 3300046501 Ga0495607_0037727 Ga0495607_0037727_1665_2234 184
53 3300046516 Ga0495628_0001984 Ga0495628_0001984_4210_4782 184
54 3300046517 Ga0495630_0248317 Ga0495630_0248317_774_1337 184
55 3300046518 Ga0495631_0003276 Ga0495631_0003276_4286_4861 184
56 3300046518 Ga0495631_0009826 Ga0495631_0009826_2744_3316 184
57 3300046518 Ga0495631_0015413 Ga0495631_0015413_573_1136 184
58 3300046522 Ga0495643_0051061 Ga0495643_0051061_761_1336 184
59 3300046523 Ga0495644_0017184 Ga0495644_0017184_397_972 184
60 3300046526 Ga0495666_0003020 Ga0495666_0003020_6535_7098 184
61 3300046526 Ga0495666_0021745 Ga0495666_0021745_88_651 184
62 3300046526 Ga0495666_0027515 Ga0495666_0027515_1827_2390 184
63 3300046528 Ga0495642_0002800 Ga0495642_0002800_2792_3355 184
64 3300046528 Ga0495642_0051023 Ga0495642_0051023_251_826 184
65 3300046531 Ga0495665_0020269 Ga0495665_0020269_2939_3502 184
66 3300046535 Ga0495586_0166009 Ga0495586_0166009_126_689 184
67 3300046536 Ga0495587_0021441 Ga0495587_0021441_1112_1675 184
68 3300046538 Ga0495609_0005263 Ga0495609_0005263_936_1511 184
69 3300046542 Ga0495597_0045424 Ga0495597_0045424_862_1425 184
70 3300046557 Ga0495622_0027506 Ga0495622_0027506_351_926 184
71 3300046557 Ga0495622_0106081 Ga0495622_0106081_208_777 184
72 3300046557 Ga0495622_0145495 Ga0495622_0145495_115_678 184
73 3300046557 Ga0495622_0273189 Ga0495622_0273189_65_628 184
74 3300046558 Ga0495633_0019058 Ga0495633_0019058_1066_1638 184
75 3300046558 Ga0495633_0097289 Ga0495633_0097289_147_710 184
76 3300046558 Ga0495633_0107395 Ga0495633_0107395_102_665 184
77 3300046559 Ga0495667_0134261 Ga0495667_0134261_657_1220 184
78 3300046616 Ga0495668_0017709 Ga0495668_0017709_469_1032 184
79 3300046616 Ga0495668_0115626 Ga0495668_0115626_293_868 184
80 3300046648 Ga0495611_0013811 Ga0495611_0013811_1485_2060 184
81 3300046665 Ga0495661_0000539 Ga0495661_0000539_11487_12059 184
82 3300046674 Ga0495588_0162094 Ga0495588_0162094_238_801 184
83 3300046691 Ga0495670_0000301 Ga0495670_0000301_2747_3319 184
84 3300046691 Ga0495670_0007427 Ga0495670_0007427_2226_2801 184
85 3300046691 Ga0495670_0280618 Ga0495670_0280618_244_807 184
86 3300046692 Ga0495671_0041077 Ga0495671_0041077_509_1072 184
87 3300046794 Ga0495589_0050504 Ga0495589_0050504_52_627 184
88 3300047319 Ga0495674_0004065 Ga0495674_0004065_256_819 184
89 3300047321 Ga0495676_0007739 Ga0495676_0007739_530_1093 184
90 3300047321 Ga0495676_0057041 Ga0495676_0057041_1178_1741 184
91 3300047321 Ga0495676_0064522 Ga0495676_0064522_793_1368 184
92 3300047323 Ga0495683_0152191 Ga0495683_0152191_414_977 184
93 3300047444 Ga0495675_0195263 Ga0495675_0195263_653_1216 184
94 3300047469 Ga0495673_0045330 Ga0495673_0045330_315_890 184
95 3300047470 Ga0495681_0025422 Ga0495681_0025422_1923_2495 184
96 3300047673 Ga0495593_0010690 Ga0495593_0010690_40_603 184
97 3300048088 Ga0495602_0075385 Ga0495602_0075385_140_703 184
98 3300048091 Ga0495626_0026903 Ga0495626_0026903_767_1342 184
99 3300048903 Ga0496100_0671847 Ga0496100_0671847_217_780 184
100 3300048918 Ga0496115_0003150 Ga0496115_0003150_1144_1707 184
101 3300048918 Ga0496115_0025763 Ga0496115_0025763_2054_2617 184
102 3300048918 Ga0496115_0896450 Ga0496115_0896450_21_584 184
103 iso_pu_bacteria 2808606418 2809145701 184
104 3300031728 Ga0316578_10122226 Ga0316578_101222263 185
105 3300031733 Ga0316577_10419416 Ga0316577_104194161 185
106 3300032139 Ga0316580_10002381 Ga0316580_100023812 185
107 3300036647 Ga0316582_0055759 Ga0316582_0055759_1511_2095 185
108 3300036712 Ga0316584_0001442 Ga0316584_0001442_11607_12191 185
109 3300042139 Ga0450904_000023 Ga0450904_000023_17826_18392 185
110 3300044683 Ga0466965_0005832 Ga0466965_0005832_3631_4197 185
111 3300044735 Ga0466968_0008926 Ga0466968_0008926_1660_2226 185
112 3300045051 Ga0451576_0000227 Ga0451576_0000227_100264_100863 185
113 3300045051 Ga0451576_0076873 Ga0451576_0076873_1134_1796 185
114 3300046530 Ga0495654_0086618 Ga0495654_0086618_837_1415 185
115 3300046535 Ga0495586_0025070 Ga0495586_0025070_2528_3145 185
116 3300046558 Ga0495633_0000353 Ga0495633_0000353_11562_12140 185
117 3300046674 Ga0495588_0053840 Ga0495588_0053840_828_1409 185
118 3300046809 Ga0495600_0337143 Ga0495600_0337143_221_838 185
119 3300047317 Ga0495604_0216863 Ga0495604_0216863_71_688 185
120 3300005435 Ga0070714_101226207 Ga0070714_1012262071 186
121 3300010375 Ga0105239_10033637 Ga0105239_100336374 186
122 3300027907 Ga0207428_10024048 Ga0207428_100240486 186
123 3300031251 Ga0265327_10005040 Ga0265327_100050409 186
124 3300031251 Ga0265327_10031593 Ga0265327_100315932 186
125 3300031548 Ga0307408_100000312 Ga0307408_1000003122 186
126 3300031727 Ga0316576_10002774 Ga0316576_100027749 186
127 3300031727 Ga0316576_10025686 Ga0316576_100256861 186
128 3300031727 Ga0316576_10073243 Ga0316576_100732434 186
129 3300031727 Ga0316576_10076068 Ga0316576_100760682 186
130 3300031728 Ga0316578_10466652 Ga0316578_104666521 186
131 3300031733 Ga0316577_10075557 Ga0316577_100755571 186
132 3300035112 Ga0373932_0094620 Ga0373932_0094620_150_722 186
133 3300035115 Ga0373941_0253045 Ga0373941_0253045_97_669 186
134 3300035398 Ga0316574_0138767 Ga0316574_0138767_236_823 186
135 3300035398 Ga0316574_0179685 Ga0316574_0179685_291_869 186
136 3300035398 Ga0316574_0493643 Ga0316574_0493643_158_745 186
137 3300035691 Ga0373931_0439931 Ga0373931_0439931_146_718 186
138 3300035724 Ga0373933_0514407 Ga0373933_0514407_144_728 186
139 3300036647 Ga0316582_0149602 Ga0316582_0149602_160_738 186
140 3300036712 Ga0316584_0108684 Ga0316584_0108684_210_815 186
141 3300046529 Ga0495652_0178000 Ga0495652_0178000_110_688 186
142 3300046543 Ga0495645_0015994 Ga0495645_0015994_48_626 186
143 3300046680 Ga0495646_0008976 Ga0495646_0008976_1213_1791 186
144 3300049459 Ga0495678_020762 Ga0495678_020762_938_1498 186
145 3300050511 nmdc:mga08y16_5468_c1 nmdc:mga08y16_5468_c1_9241_9837 186
146 3300005468 Ga0070707_100023880 Ga0070707_1000238804 187
147 3300005937 Ga0081455_10163462 Ga0081455_101634622 187
148 3300009176 Ga0105242_11496053 Ga0105242_114960532 187
149 3300021361 Ga0213872_10000230 Ga0213872_1000023011 187
150 3300021361 Ga0213872_10004908 Ga0213872_100049087 187
151 3300021361 Ga0213872_10030418 Ga0213872_100304182 187
152 3300025910 Ga0207684_10071703 Ga0207684_100717032 187
153 3300025922 Ga0207646_10023343 Ga0207646_100233435 187
154 3300028800 Ga0265338_10068361 Ga0265338_100683613 187
155 3300037312 Ga0395899_0003811 Ga0395899_0003811_142_723 187
156 3300037418 Ga0395900_0449301 Ga0395900_0449301_617_1198 187
157 3300038443 Ga0395901_0032110 Ga0395901_0032110_4678_5259 187
158 3300039447 Ga0436361_0085135 Ga0436361_0085135_25370_25948 187
159 3300039447 Ga0436361_0089479 Ga0436361_0089479_3214_3780 187
160 3300039447 Ga0436361_0465236 Ga0436361_0465236_570_1136 187
161 3300039447 Ga0436361_0700785 Ga0436361_0700785_1840_2406 187
162 3300039447 Ga0436361_0915871 Ga0436361_0915871_5666_6232 187
163 3300046501 Ga0495607_0029108 Ga0495607_0029108_377_952 187
164 3300046507 Ga0495606_0016201 Ga0495606_0016201_2091_2666 187
165 3300046542 Ga0495597_0041578 Ga0495597_0041578_782_1357 187
166 3300046660 Ga0495625_0011526 Ga0495625_0011526_526_1101 187
167 3300046664 Ga0495659_0000055 Ga0495659_0000055_14956_15531 187
168 3300046665 Ga0495661_0058568 Ga0495661_0058568_1670_2245 187
169 3300046692 Ga0495671_0000986 Ga0495671_0000986_12748_13323 187
170 3300046810 Ga0495660_0021297 Ga0495660_0021297_2422_2997 187
171 3300047320 Ga0495672_0000591 Ga0495672_0000591_10749_11324 187
172 3300047472 Ga0495686_0026098 Ga0495686_0026098_845_1441 187
173 3300005616 Ga0068852_100690293 Ga0068852_1006902931 188
174 3300021361 Ga0213872_10000005 Ga0213872_10000005154 188
175 3300031711 Ga0265314_10003573 Ga0265314_100035735 188
176 3300044765 Ga0466970_0006356 Ga0466970_0006356_5207_5788 188
177 3300045049 Ga0466959_0002610 Ga0466959_0002610_1053_1634 188
178 3300046471 Ga0495650_0000307 Ga0495650_0000307_7859_8452 188
179 3300046507 Ga0495606_0000090 Ga0495606_0000090_56205_56786 188
180 3300046507 Ga0495606_0001184 Ga0495606_0001184_25963_26556 188
181 3300046522 Ga0495643_0061595 Ga0495643_0061595_453_1034 188
182 3300046681 Ga0495647_0135186 Ga0495647_0135186_116_751 188
183 3300046694 Ga0495649_0016124 Ga0495649_0016124_1814_2392 188
184 3300048907 Ga0496104_0509374 Ga0496104_0509374_469_1065 188
185 3300049671 Ga0501238_000159 Ga0501238_000159_291_869 188
186 3300003771 Ga0055526_1020302 Ga0055526_10203021 189
187 3300003773 Ga0055537_1000139 Ga0055537_100013934 189
188 3300003775 Ga0055524_1007245 Ga0055524_10072453 189
189 3300003784 Ga0055534_1000888 Ga0055534_10008882 189
190 3300003790 Ga0055528_1001156 Ga0055528_10011567 189
191 3300005262 Ga0065165_1000590 Ga0065165_100059011 189
192 3300009092 Ga0105250_10025559 Ga0105250_100255592 189
193 3300025208 Ga0209436_114106 Ga0209436_1141062 189
194 3300025263 Ga0209565_1000055 Ga0209565_1000055155 189
195 3300025273 Ga0209673_1000040 Ga0209673_1000040155 189
196 3300025284 Ga0209130_1000195 Ga0209130_100019549 189
197 3300025291 Ga0209675_1000052 Ga0209675_100005234 189
198 3300025295 Ga0209564_1000121 Ga0209564_100012150 189
199 3300025299 Ga0209256_1000054 Ga0209256_1000054120 189
200 3300025299 Ga0209256_1000100 Ga0209256_100010034 189
201 3300025711 Ga0207696_1053682 Ga0207696_10536822 189
202 3300046457 Ga0495590_0070045 Ga0495590_0070045_642_1211 189
203 3300046460 Ga0495638_0073937 Ga0495638_0073937_1211_1780 189
204 3300046500 Ga0495596_0011185 Ga0495596_0011185_129_773 189
205 3300046501 Ga0495607_0004071 Ga0495607_0004071_6419_6988 189
206 3300046506 Ga0495583_0023892 Ga0495583_0023892_1998_2567 189
207 3300046538 Ga0495609_0000738 Ga0495609_0000738_21840_22409 189
208 3300046616 Ga0495668_0015219 Ga0495668_0015219_1058_1627 189
209 3300046648 Ga0495611_0088710 Ga0495611_0088710_94_663 189
210 3300046660 Ga0495625_0006070 Ga0495625_0006070_4212_4781 189
211 3300046664 Ga0495659_0000588 Ga0495659_0000588_6297_6866 189
212 3300046684 Ga0495669_0000176 Ga0495669_0000176_14984_15553 189
213 3300046692 Ga0495671_0202284 Ga0495671_0202284_51_620 189
214 3300047318 Ga0495636_0009251 Ga0495636_0009251_348_917 189
215 3300047445 Ga0495677_0019316 Ga0495677_0019316_802_1371 189
216 3300047446 Ga0495679_002994 Ga0495679_002994_7331_7900 189
217 3300047470 Ga0495681_0000684 Ga0495681_0000684_5733_6302 189
218 3300049671 Ga0501238_006928 Ga0501238_006928_149_736 189

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03352

Adenine_glyco

Methyladenine glycosylase

39

215

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ofk-assembly1.cif.gz_A crystal structure of 3-methyladenine dna glycosylase i (tag) 0.9749 5 180
4ai5-assembly3.cif.gz_C crystal structure of y16f of 3-methyladenine dna glycosylase i (tag) in complex with 3-methyladenine 0.9579 6 180
4aia-assembly4.cif.gz_D the structural basis of 3-methyladenine recognition by 3- methyladenine dna glycosylase i (tag) from staphylococcus aureus 0.9517 4 180
4ai4-assembly1.cif.gz_A crystal structure of e38q mutant of 3-methyladenine dna glycosylase i from staphylococcus aureus 0.9476 6 180
2ofk-assembly1.cif.gz_A crystal structure of 3-methyladenine dna glycosylase i (tag) 0.938 5 180
ID Description Score Start End Superfamily
af_P05100_1_187_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9828 4 179 1.10.340.30
af_Q2FXR7_1_186_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9578 6 180 1.10.340.30
af_C6TKE8_117_301_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9535 4 182 1.10.340.30
af_A0A1D6I4F4_25_202_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9223 11 181 1.10.340.30
af_P05100_1_187_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9206 4 179 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A1H3EQR0-F1-model_v4 DNA-3-methyladenine glycosylase I 0.9929 1 184 GO:0006284
GO:0008725
GO:0046872
AF-A0A2V7Q6M6-F1-model_v4 DNA-3-methyladenine glycosylase I 0.9898 18 185 GO:0006284
GO:0008725
GO:0046872
AF-A0A4Q3X5K2-F1-model_v4 deleted 0.9897 18 182
AF-A0A800CXU2-F1-model_v4 DNA-3-methyladenine glycosylase I 0.9895 3 185 GO:0006284
GO:0008725
GO:0046872
AF-A0A0N0XKE9-F1-model_v4 DNA-3-methyladenine glycosylase 1 (EC 3.2.2.20) 0.9894 1 182 GO:0006284
GO:0008725
GO:0046872

Feature Viewer

pLDDT pTM Quality
94.4 0.91 High
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Predicted Structure (AlphaFold2)

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