F330102

General Info

Members Datasets Scaffolds Average Seq Length
218 150 436 441

Family's Representative Sequence

Representative Sequence 3300031239|Ga0265328_10000606|Ga0265328_1000060614
Length 511
Sequence MTQRSLAIGRGTGVRVLMAAVNRRRSSPASRGPPDRRRGRAARAETCEADGDTCDVTVRKLRPRPSRKPSQGSYLDVPALIARKRDGGALDDDAIRALVAGAATGAIPDYQIAALLMAIVWRGLAPRELGVWMRAMIASGERLDLDAIPGRKVDKHSTGGVGDKVSICLAPLVAACGVPVPMIAGRALGHTGGTLDKLEAIPGFRCALAPAEFRRVLRGCGLVMAGQSERLVPADRRLYALRDATATVESIPLIASSILAKKVAEGTDALLMDVKVGGGAFLPSIDDARRLARTLVRLGRGEGLEVVALLTSMDQPLGREIGNASELGEAIEILSGGGPDDTRALTVRFGAEMLVLGRVARDLSDGSRRIEAAIASGAGLEKLGRCIELQGGDRRVLDRPHERLPAARHQHAVLARRAGVVSAIDARAVGRAATVLGAGRLRKEDAVDPAVGITLAHKIGARVVRGDLLATLHYNDRRRFDTALPQVERAFAIRAGDTPATAPLVRERIAK

Samples

Sample ID Description Type Environment
1 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
70 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
71 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
72 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
73 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
74 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
146 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.84
Rhizosphere 86.24
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265328_10000606 3300031239 Bacteria 16677
2 rootL2_10098308 3300003322 Bacteria 3249
3 Ga0070658_10013971 3300005327 Bacteria 6446
4 Ga0070676_10039665 3300005328 Bacteria 2724
5 Ga0070682_100101726 3300005337 Bacteria 1898
6 Ga0068868_100059663 3300005338 Bacteria 3018
7 Ga0070689_100000030 3300005340 Bacteria 96146
8 Ga0070687_100000400 3300005343 Bacteria 14733
9 Ga0070675_100093228 3300005354 Bacteria 2525
10 Ga0070688_100109385 3300005365 Bacteria 1836
11 Ga0070713_100065518 3300005436 Bacteria 3052
12 Ga0070713_100108005 3300005436 Bacteria 2422
13 Ga0070700_100105822 3300005441 Bacteria 1861
14 Ga0070708_100071386 3300005445 Bacteria 3126
15 Ga0070681_10144069 3300005458 Bacteria 2312
16 Ga0070707_100000574 3300005468 Bacteria 36986
17 Ga0070679_100043804 3300005530 Bacteria 4456
18 Ga0070684_100121478 3300005535 Bacteria 2350
19 Ga0070697_100021842 3300005536 Bacteria 5074
20 Ga0068853_100001740 3300005539 Bacteria 15955
21 Ga0070686_100142989 3300005544 Bacteria 1667
22 Ga0070695_100035234 3300005545 Bacteria 3143
23 Ga0070695_100131080 3300005545 Bacteria 1728
24 Ga0070696_100001378 3300005546 Bacteria 15884
25 Ga0070696_100139320 3300005546 Bacteria 1771
26 Ga0068855_100042268 3300005563 Bacteria 5400
27 Ga0068855_100077668 3300005563 Bacteria 3853
28 Ga0068855_100089937 3300005563 Bacteria 3544
29 Ga0068857_100050928 3300005577 Bacteria 3673
30 Ga0068856_100020109 3300005614 Bacteria 6485
31 Ga0068859_100015025 3300005617 Bacteria 7772
32 Ga0068859_100229562 3300005617 Bacteria 1944
33 Ga0068863_100070666 3300005841 Bacteria 3301
34 Ga0068858_100000003 3300005842 Bacteria 349151
35 Ga0081538_10029158 3300005981 Bacteria 3777
36 Ga0097621_100180401 3300006237 Bacteria 1824
37 Ga0075428_100059091 3300006844 Bacteria 4199
38 Ga0075431_100084325 3300006847 Bacteria 3280
39 Ga0075431_100092636 3300006847 Bacteria 3119
40 Ga0075433_10067071 3300006852 Bacteria 3149
41 Ga0075434_100030177 3300006871 Bacteria 5339
42 Ga0075434_100037325 3300006871 Bacteria 4810
43 Ga0075429_100106645 3300006880 Bacteria 2448
44 Ga0097620_100015025 3300006931 Bacteria 7772
45 Ga0097620_100229565 3300006931 Bacteria 1944
46 Ga0075435_100112540 3300007076 Bacteria 2265
47 Ga0105240_10001708 3300009093 Bacteria 37092
48 Ga0111539_10035946 3300009094 Bacteria 5995
49 Ga0111539_10038077 3300009094 Bacteria 5802
50 Ga0105247_10017283 3300009101 Bacteria 4329
51 Ga0114129_10000088 3300009147 Bacteria 86607
52 Ga0114129_10304247 3300009147 Bacteria 2124
53 Ga0105242_10175991 3300009176 Bacteria 1884
54 Ga0105238_10005622 3300009551 Bacteria 12389
55 Ga0105238_10007691 3300009551 Bacteria 10777
56 Ga0105249_10041293 3300009553 Bacteria 4193
57 Ga0105239_10007687 3300010375 Bacteria 12343
58 Ga0105246_10096911 3300011119 Bacteria 2139
59 Ga0157379_10000846 3300014968 Bacteria 24777
60 Ga0207710_10000062 3300025900 Bacteria 164192
61 Ga0207680_10023351 3300025903 Bacteria 3376
62 Ga0207707_10137034 3300025912 Bacteria 2140
63 Ga0207707_10149969 3300025912 Bacteria 2039
64 Ga0207695_10001400 3300025913 Bacteria 40672
65 Ga0207671_10000193 3300025914 Bacteria 94808
66 Ga0207660_10008565 3300025917 Bacteria 6619
67 Ga0207660_10030641 3300025917 Bacteria 3698
68 Ga0207662_10001661 3300025918 Bacteria 10874
69 Ga0207657_10192624 3300025919 Bacteria 1644
70 Ga0207652_10013135 3300025921 Bacteria 6704
71 Ga0207694_10007916 3300025924 Bacteria 8041
72 Ga0207670_10000003 3300025936 Bacteria 760449
73 Ga0207667_10032810 3300025949 Bacteria 5590
74 Ga0207667_10115394 3300025949 Bacteria 2768
75 Ga0207667_10149118 3300025949 Bacteria 2407
76 Ga0207703_10000006 3300026035 Bacteria 502351
77 Ga0207639_10002582 3300026041 Bacteria 12156
78 Ga0207708_10117737 3300026075 Bacteria 2068
79 Ga0207641_10141237 3300026088 Bacteria 2173
80 Ga0207676_10155168 3300026095 Bacteria 1977
81 Ga0209974_10013949 3300027876 Bacteria 2677
82 Ga0207428_10007472 3300027907 Bacteria 9963
83 Ga0268266_10154236 3300028379 Bacteria 2073
84 Ga0265318_10000116 3300028577 Bacteria 73597
85 Ga0265318_10000496 3300028577 Bacteria 28850
86 Ga0265336_10002516 3300028666 Bacteria 7509
87 Ga0265330_10000475 3300031235 Bacteria 26948
88 Ga0265330_10000925 3300031235 Bacteria 18046
89 Ga0265332_10000419 3300031238 Bacteria 30177
90 Ga0265332_10000700 3300031238 Bacteria 21235
91 Ga0265332_10034313 3300031238 Bacteria 2206
92 Ga0265328_10000213 3300031239 Bacteria 26961
93 Ga0265328_10002044 3300031239 Bacteria 9122
94 Ga0265320_10000017 3300031240 Bacteria 196688
95 Ga0265320_10001285 3300031240 Bacteria 18307
96 Ga0265325_10023722 3300031241 Bacteria 3344
97 Ga0265329_10000809 3300031242 Bacteria 15904
98 Ga0265339_10003206 3300031249 Bacteria 11480
99 Ga0265339_10014272 3300031249 Bacteria 4791
100 Ga0265331_10000027 3300031250 Bacteria 220058
101 Ga0265331_10001351 3300031250 Bacteria 18034
102 Ga0265316_10002686 3300031344 Bacteria 18311
103 Ga0265316_10011896 3300031344 Bacteria 7823
104 Ga0307408_100020665 3300031548 Bacteria 4447
105 Ga0265313_10021548 3300031595 Bacteria 3523
106 Ga0265314_10000333 3300031711 Bacteria 66259
107 Ga0265314_10003486 3300031711 Bacteria 15188
108 Ga0265314_10005197 3300031711 Bacteria 11821
109 Ga0265342_10000508 3300031712 Bacteria 41617
110 Ga0265342_10002337 3300031712 Bacteria 16475
111 Ga0265342_10010673 3300031712 Bacteria 6347
112 Ga0307413_10020369 3300031824 Bacteria 3526
113 Ga0307410_10001263 3300031852 Bacteria 11237
114 Ga0307409_100005314 3300031995 Bacteria 7393
115 Ga0307416_100000446 3300032002 Bacteria 21147
116 Ga0307414_10052692 3300032004 Bacteria 2833
117 Ga0307411_10005001 3300032005 Bacteria 6449
118 Ga0307415_100005191 3300032126 Bacteria 6880
119 Ga0373954_0009977 3300035118 Bacteria 4184
120 Ga0373943_0012190 3300035170 Bacteria 3871
121 Ga0373955_0009593 3300035172 Bacteria 4542
122 Ga0373931_0011005 3300035691 Bacteria 4362
123 Ga0373933_0000146 3300035724 Bacteria 46109
124 Ga0373937_0000589 3300036401 Bacteria 32271
125 Ga0373937_0002508 3300036401 Bacteria 15247
126 Ga0373937_0005043 3300036401 Bacteria 11242
127 Ga0373937_0152391 3300036401 Bacteria 2166
128 Ga0373925_0036373 3300037068 Bacteria 3634
129 Ga0400483_184055 3300039062 Bacteria 2339
130 Ga0495586_0006198 3300046535 Bacteria 6394
131 Ga0495634_0006010 3300046642 Bacteria 9264
132 Ga0495635_0035711 3300046663 Bacteria 3446
133 Ga0495674_0009462 3300047319 Bacteria 9258
134 Ga0495674_0200485 3300047319 Bacteria 1656
135 Ga0496101_0099330 3300048904 Bacteria 2176
136 Ga0496101_0243530 3300048904 Bacteria 1400
137 Ga0496102_0005516 3300048905 Bacteria 10743
138 Ga0496102_0293889 3300048905 Bacteria 1531
139 Ga0496102_0438001 3300048905 Bacteria 1227
140 Ga0496104_0019131 3300048907 Bacteria 6261
141 Ga0496104_0104868 3300048907 Bacteria 2709
142 Ga0496104_0371792 3300048907 Bacteria 1342
143 Ga0496105_0060038 3300048908 Bacteria 3137
144 Ga0496105_0061774 3300048908 Bacteria 3092
145 Ga0496106_0021549 3300048909 Bacteria 4786
146 Ga0496108_0004783 3300048911 Bacteria 10921
147 Ga0496108_0054080 3300048911 Bacteria 3369
148 Ga0496109_0000892 3300048912 Bacteria 24932
149 Ga0496109_0004507 3300048912 Bacteria 11639
150 Ga0496109_0015715 3300048912 Bacteria 6604
151 Ga0496110_0022790 3300048913 Bacteria 5321
152 Ga0496111_0002585 3300048914 Bacteria 10960
153 Ga0496111_0003267 3300048914 Bacteria 10014
154 Ga0496111_0124047 3300048914 Bacteria 1909
155 Ga0496112_0008863 3300048915 Bacteria 9025
156 Ga0496112_0015568 3300048915 Bacteria 7104
157 Ga0496112_0018004 3300048915 Bacteria 6648
158 Ga0496113_0011548 3300048916 Bacteria 5900
159 Ga0496114_0007772 3300048917 Bacteria 8485
160 Ga0496114_0010121 3300048917 Bacteria 7502
161 Ga0496114_0083975 3300048917 Bacteria 2695
162 Ga0496115_0008255 3300048918 Bacteria 7697
163 Ga0501033_0034289 3300049570 Bacteria 3808
164 Ga0501036_0008119 3300049572 Bacteria 8602
165 Ga0501037_0003575 3300049573 Bacteria 11276
166 Ga0501038_0036411 3300049574 Bacteria 4319
167 Ga0501040_0058316 3300049576 Bacteria 2651
168 Ga0501040_0140913 3300049576 Bacteria 1699
169 Ga0501041_0029390 3300049577 Bacteria 3315
170 Ga0501042_0182147 3300049578 Bacteria 1516
171 Ga0501043_0058904 3300049579 Bacteria 3014
172 Ga0501046_0003585 3300049580 Bacteria 14217
173 Ga0501046_0063543 3300049580 Bacteria 2882
174 Ga0501047_0191149 3300049581 Bacteria 1910
175 Ga0501048_0054787 3300049582 Bacteria 2833
176 Ga0501048_0082048 3300049582 Bacteria 2274
177 Ga0501067_0052673 3300049583 Bacteria 2255
178 Ga0501067_0110220 3300049583 Bacteria 1530
179 Ga0501069_0110248 3300049585 Bacteria 1567
180 Ga0501071_0011617 3300049587 Bacteria 5944
181 Ga0501071_0016479 3300049587 Bacteria 5082
182 Ga0501072_0010880 3300049588 Bacteria 6940
183 Ga0501072_0069358 3300049588 Bacteria 2784
184 Ga0501072_0294371 3300049588 Bacteria 1290
185 Ga0501074_0030121 3300049590 Bacteria 3933
186 Ga0501075_0010536 3300049591 Bacteria 6499
187 Ga0501075_0067462 3300049591 Bacteria 2701
188 Ga0501076_0009361 3300049592 Bacteria 7232
189 Ga0501076_0037051 3300049592 Bacteria 3823
190 Ga0501077_0001223 3300049593 Bacteria 15504
191 Ga0501079_0034271 3300049741 Bacteria 3906
192 Ga0501080_0036683 3300049742 Bacteria 4576
193 Ga0501080_0156995 3300049742 Bacteria 2101
194 Ga0501081_0009367 3300049743 Bacteria 6382
195 Ga0501083_0002302 3300049744 Bacteria 13076
196 Ga0501045_0008049 3300049824 Bacteria 7344
197 nmdc:mga05p37_4456_c1 3300050507 Bacteria 16371
198 nmdc:mga05p37_87508_c1 3300050507 Bacteria 3839
199 nmdc:mga0qj67_32362_c1 3300050509 Bacteria 4077
200 nmdc:mga06r32_20659_c1 3300050510 Bacteria 6065
201 nmdc:mga06r32_40071_c1 3300050510 Bacteria 4446
202 nmdc:mga06r32_76530_c1 3300050510 Bacteria 3249
203 nmdc:mga08y16_18676_c1 3300050511 Bacteria 7304
204 nmdc:mga08y16_188458_c1 3300050511 Bacteria 2140
205 nmdc:mga08y16_433992_c1 3300050511 Bacteria 1341
206 nmdc:mga0n895_190781_c1 3300050512 Bacteria 2080
207 nmdc:mga0n895_1916_c1 3300050512 Bacteria 15946
208 nmdc:mga0n895_81374_c1 3300050512 Bacteria 3227
209 nmdc:mga0rr50_139136_c1 3300050513 Bacteria 1951
210 nmdc:mga0a205_131250_c2 3300050515 Bacteria 1818
211 nmdc:mga0a205_135718_c1 3300050515 Unclassified 2361
212 Ga0495601_0060281 3300053077 Bacteria 2408
213 Ga0495595_0045416 3300053084 Bacteria 2021
214 Ga0501084_0037239 3300054114 Bacteria 4064
215 Ga0501084_0042612 3300054114 Bacteria 3797
216 Ga0590071_001371 3300059421 Bacteria 6464
217 Ga0590074_009393 3300059423 Bacteria 1629
218 Ga0501082_0141346 3300060353 Bacteria 2089
219 Ga0265328_10000606
220 rootL2_10098308
221 Ga0070658_10013971
222 Ga0070676_10039665
223 Ga0070682_100101726
224 Ga0068868_100059663
225 Ga0070689_100000030
226 Ga0070687_100000400
227 Ga0070675_100093228
228 Ga0070688_100109385
229 Ga0070713_100065518
230 Ga0070713_100108005
231 Ga0070700_100105822
232 Ga0070708_100071386
233 Ga0070681_10144069
234 Ga0070707_100000574
235 Ga0070679_100043804
236 Ga0070684_100121478
237 Ga0070697_100021842
238 Ga0068853_100001740
239 Ga0070686_100142989
240 Ga0070695_100035234
241 Ga0070695_100131080
242 Ga0070696_100001378
243 Ga0070696_100139320
244 Ga0068855_100042268
245 Ga0068855_100077668
246 Ga0068855_100089937
247 Ga0068857_100050928
248 Ga0068856_100020109
249 Ga0068859_100015025
250 Ga0068859_100229562
251 Ga0068863_100070666
252 Ga0068858_100000003
253 Ga0081538_10029158
254 Ga0097621_100180401
255 Ga0075428_100059091
256 Ga0075431_100084325
257 Ga0075431_100092636
258 Ga0075433_10067071
259 Ga0075434_100030177
260 Ga0075434_100037325
261 Ga0075429_100106645
262 Ga0097620_100015025
263 Ga0097620_100229565
264 Ga0075435_100112540
265 Ga0105240_10001708
266 Ga0111539_10035946
267 Ga0111539_10038077
268 Ga0105247_10017283
269 Ga0114129_10000088
270 Ga0114129_10304247
271 Ga0105242_10175991
272 Ga0105238_10005622
273 Ga0105238_10007691
274 Ga0105249_10041293
275 Ga0105239_10007687
276 Ga0105246_10096911
277 Ga0157379_10000846
278 Ga0207710_10000062
279 Ga0207680_10023351
280 Ga0207707_10137034
281 Ga0207707_10149969
282 Ga0207695_10001400
283 Ga0207671_10000193
284 Ga0207660_10008565
285 Ga0207660_10030641
286 Ga0207662_10001661
287 Ga0207657_10192624
288 Ga0207652_10013135
289 Ga0207694_10007916
290 Ga0207670_10000003
291 Ga0207667_10032810
292 Ga0207667_10115394
293 Ga0207667_10149118
294 Ga0207703_10000006
295 Ga0207639_10002582
296 Ga0207708_10117737
297 Ga0207641_10141237
298 Ga0207676_10155168
299 Ga0209974_10013949
300 Ga0207428_10007472
301 Ga0268266_10154236
302 Ga0265318_10000116
303 Ga0265318_10000496
304 Ga0265336_10002516
305 Ga0265330_10000475
306 Ga0265330_10000925
307 Ga0265332_10000419
308 Ga0265332_10000700
309 Ga0265332_10034313
310 Ga0265328_10000213
311 Ga0265328_10002044
312 Ga0265320_10000017
313 Ga0265320_10001285
314 Ga0265325_10023722
315 Ga0265329_10000809
316 Ga0265339_10003206
317 Ga0265339_10014272
318 Ga0265331_10000027
319 Ga0265331_10001351
320 Ga0265316_10002686
321 Ga0265316_10011896
322 Ga0307408_100020665
323 Ga0265313_10021548
324 Ga0265314_10000333
325 Ga0265314_10003486
326 Ga0265314_10005197
327 Ga0265342_10000508
328 Ga0265342_10002337
329 Ga0265342_10010673
330 Ga0307413_10020369
331 Ga0307410_10001263
332 Ga0307409_100005314
333 Ga0307416_100000446
334 Ga0307414_10052692
335 Ga0307411_10005001
336 Ga0307415_100005191
337 Ga0373954_0009977
338 Ga0373943_0012190
339 Ga0373955_0009593
340 Ga0373931_0011005
341 Ga0373933_0000146
342 Ga0373937_0000589
343 Ga0373937_0002508
344 Ga0373937_0005043
345 Ga0373937_0152391
346 Ga0373925_0036373
347 Ga0400483_184055
348 Ga0495586_0006198
349 Ga0495634_0006010
350 Ga0495635_0035711
351 Ga0495674_0009462
352 Ga0495674_0200485
353 Ga0496101_0099330
354 Ga0496101_0243530
355 Ga0496102_0005516
356 Ga0496102_0293889
357 Ga0496102_0438001
358 Ga0496104_0019131
359 Ga0496104_0104868
360 Ga0496104_0371792
361 Ga0496105_0060038
362 Ga0496105_0061774
363 Ga0496106_0021549
364 Ga0496108_0004783
365 Ga0496108_0054080
366 Ga0496109_0000892
367 Ga0496109_0004507
368 Ga0496109_0015715
369 Ga0496110_0022790
370 Ga0496111_0002585
371 Ga0496111_0003267
372 Ga0496111_0124047
373 Ga0496112_0008863
374 Ga0496112_0015568
375 Ga0496112_0018004
376 Ga0496113_0011548
377 Ga0496114_0007772
378 Ga0496114_0010121
379 Ga0496114_0083975
380 Ga0496115_0008255
381 Ga0501033_0034289
382 Ga0501036_0008119
383 Ga0501037_0003575
384 Ga0501038_0036411
385 Ga0501040_0058316
386 Ga0501040_0140913
387 Ga0501041_0029390
388 Ga0501042_0182147
389 Ga0501043_0058904
390 Ga0501046_0003585
391 Ga0501046_0063543
392 Ga0501047_0191149
393 Ga0501048_0054787
394 Ga0501048_0082048
395 Ga0501067_0052673
396 Ga0501067_0110220
397 Ga0501069_0110248
398 Ga0501071_0011617
399 Ga0501071_0016479
400 Ga0501072_0010880
401 Ga0501072_0069358
402 Ga0501072_0294371
403 Ga0501074_0030121
404 Ga0501075_0010536
405 Ga0501075_0067462
406 Ga0501076_0009361
407 Ga0501076_0037051
408 Ga0501077_0001223
409 Ga0501079_0034271
410 Ga0501080_0036683
411 Ga0501080_0156995
412 Ga0501081_0009367
413 Ga0501083_0002302
414 Ga0501045_0008049
415 nmdc:mga05p37_4456_c1
416 nmdc:mga05p37_87508_c1
417 nmdc:mga0qj67_32362_c1
418 nmdc:mga06r32_20659_c1
419 nmdc:mga06r32_40071_c1
420 nmdc:mga06r32_76530_c1
421 nmdc:mga08y16_18676_c1
422 nmdc:mga08y16_188458_c1
423 nmdc:mga08y16_433992_c1
424 nmdc:mga0n895_190781_c1
425 nmdc:mga0n895_1916_c1
426 nmdc:mga0n895_81374_c1
427 nmdc:mga0rr50_139136_c1
428 nmdc:mga0a205_131250_c2
429 nmdc:mga0a205_135718_c1
430 Ga0495601_0060281
431 Ga0495595_0045416
432 Ga0501084_0037239
433 Ga0501084_0042612
434 Ga0590071_001371
435 Ga0590074_009393
436 Ga0501082_0141346

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02885

Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

78

140

0.98

PF00591

Glycos_transf_3

Glycosyl transferase family, a/b domain

149

380

0.97

PF07831

PYNP_C

Pyrimidine nucleoside phosphorylase C-terminal domain

420

494

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1brw-assembly1.cif.gz_B the crystal structure of pyrimidine nucleoside phosphorylase in a closed conformation 0.9571 1 431
1brw-assembly1.cif.gz_B the crystal structure of pyrimidine nucleoside phosphorylase in a closed conformation 0.9507 1 431
2wk6-assembly1.cif.gz_B structural features of native human thymidine phosphorylase and in complex with 5-iodouracil 0.947 3 433
4ga5-assembly4.cif.gz_D crystal structure of amp phosphorylase c-terminal deletion mutant in the apo-form 0.9429 1 419
2wk5-assembly4.cif.gz_D structural features of native human thymidine phosphorylase and in complex with 5-iodouracil 0.9417 1 433
ID Description Score Start End Superfamily
1brwB03 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9966 1 67 1.20.970.10
1brwA03 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.994 1 67 1.20.970.10
af_Q2FWC1_1_67_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9936 1 67 1.20.970.10
af_P9WFS1_8_72_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9927 4 66 1.20.970.10
1brwB03 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.982 1 67 1.20.970.10
ID Description Score Start End GO Terms
AF-A0A838NK50-F1-model_v4 Thymidine phosphorylase 0.9948 229 441 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
AF-A0A0S7WJ45-F1-model_v4 Thymidine phosphorylase 0.9917 1 332 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
AF-A0A0S7WJ45-F1-model_v4 Thymidine phosphorylase 0.9888 1 332 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
AF-A0A357T178-F1-model_v4 Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) 0.9854 205 432 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
GO:0047847
AF-A0A4V1UX56-F1-model_v4 deleted 0.9852 102 432

Map