F329822

General Info

Members Datasets Scaffolds Average Seq Length
218 148 216 530

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100087678|Ga0075431_1000876782
Length 608
Sequence MVFLLESEFCAFEYIARMIVETQKKEARNGRSGPRYCEVFVHERGGRSGRTPARIVSRRQVKLRTFPHIPRNIVAVVLRMTISRSLLVLLAAACVGGCATLPPGSDFPKTASSALAPLEQTRIGRQFADSARQQGGNSGFRMLAAGLDGFLARVQMVNAAERTLDLQYFIFRADETGKLLTNAVLRAADRGVRVRVLLDDGETIAGDDQLVALDAHPQIEVRVFNPFAYRGSVVFFRALEFTFSIARLDYRMHNKLMVVDNAIALVGGRNIGDRYFQIDPEGQYADDDVFAAGPIVTELSATFDEFWNSDMAIPVRALAEGTASDAALAEYRQVLADHHEEKKADGTDYASRVATGEPLAGMISGRLPLVWARAQLVYDSPNKKQVKEGMVGRLMHRPVAEAVAAVQGELLMITPYLIPGDEGMAMFSELRQRNVRVRILTNSLEAATVLVAHSGYIGYRAPLLEKGVEIHEVRSLLGNARGSGQSASMSRFGNYSLHAKLFVLDRKRLFVGSMNFDQRSMHLNTEIGLIIDSSVLAQQAAARFEAMVSPPNSYELVMRAGDGAGSPHLAWRTEEGGKTVEYDTEPARSNGQRFRLKLLSLLPLDAEL

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
102 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
105 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
148 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.83
Nodule 0
Rhizoplane 2.75
Rhizosphere 91.28
Stem 0
Stem Tuber 0
Unclassified 4.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10114356 3300005293 Bacteria 2452
2 Ga0070683_100032907 3300005329 Bacteria 4725
3 Ga0068869_100030060 3300005334 Bacteria 3810
4 Ga0070680_100005640 3300005336 Bacteria 9483
5 Ga0070680_100043868 3300005336 Bacteria 3633
6 Ga0070660_100000365 3300005339 Bacteria 30098
7 Ga0070660_100016026 3300005339 Bacteria 5429
8 Ga0070689_100049585 3300005340 Bacteria 3242
9 Ga0070661_100018040 3300005344 Bacteria 5014
10 Ga0070661_100099126 3300005344 Bacteria 2165
11 Ga0070668_100035697 3300005347 Bacteria 3792
12 Ga0070669_100041796 3300005353 Bacteria 3335
13 Ga0070675_100024229 3300005354 Bacteria 4860
14 Ga0070671_100021742 3300005355 Bacteria 5239
15 Ga0070671_100031947 3300005355 Bacteria 4352
16 Ga0070671_100050457 3300005355 Bacteria 3461
17 Ga0070671_100092852 3300005355 Bacteria 2529
18 Ga0070659_100004698 3300005366 Bacteria 9749
19 Ga0070659_100012520 3300005366 Bacteria 6288
20 Ga0070667_100000869 3300005367 Bacteria 28061
21 Ga0070667_100001471 3300005367 Bacteria 21108
22 Ga0070709_10022673 3300005434 Bacteria 3676
23 Ga0070714_100040065 3300005435 Bacteria 3948
24 Ga0070714_100055008 3300005435 Bacteria 3401
25 Ga0070713_100024260 3300005436 Bacteria 4722
26 Ga0070713_100054481 3300005436 Bacteria 3319
27 Ga0070710_10010607 3300005437 Bacteria 4529
28 Ga0070701_10042320 3300005438 Bacteria 2325
29 Ga0070711_100010667 3300005439 Bacteria 5692
30 Ga0070711_100039332 3300005439 Bacteria 3185
31 Ga0070708_100056373 3300005445 Bacteria 3495
32 Ga0070663_100098832 3300005455 Bacteria 2175
33 Ga0070662_100000291 3300005457 Bacteria 29613
34 Ga0070681_10016362 3300005458 Bacteria 7403
35 Ga0070681_10136072 3300005458 Unclassified 2387
36 Ga0068867_100044398 3300005459 Bacteria 3256
37 Ga0070706_100032715 3300005467 Bacteria 4798
38 Ga0070706_100039779 3300005467 Bacteria 4340
39 Ga0070707_100033432 3300005468 Bacteria 4904
40 Ga0070698_100005159 3300005471 Bacteria 14285
41 Ga0070699_100018248 3300005518 Bacteria 6028
42 Ga0070696_100004716 3300005546 Bacteria 9115
43 Ga0070665_100013092 3300005548 Bacteria 8352
44 Ga0068855_100001205 3300005563 Bacteria 32157
45 Ga0068855_100001546 3300005563 Bacteria 28944
46 Ga0068855_100029995 3300005563 Bacteria 6504
47 Ga0068855_100076105 3300005563 Bacteria 3896
48 Ga0070664_100015726 3300005564 Bacteria 6192
49 Ga0070664_100175146 3300005564 Bacteria 1904
50 Ga0068854_100011051 3300005578 Bacteria 5861
51 Ga0068856_100034613 3300005614 Bacteria 4947
52 Ga0068852_100015304 3300005616 Bacteria 5940
53 Ga0068864_100117974 3300005618 Bacteria 2369
54 Ga0068851_10002162 3300005834 Bacteria 8639
55 Ga0068858_100018256 3300005842 Bacteria 6568
56 Ga0068858_100105940 3300005842 Bacteria 2624
57 Ga0068860_100136087 3300005843 Bacteria 2359
58 Ga0068862_100015318 3300005844 Bacteria 6367
59 Ga0068871_100019352 3300006358 Bacteria 5197
60 Ga0075431_100008206 3300006847 Bacteria 10436
61 Ga0075431_100087678 3300006847 Bacteria 3211
62 Ga0075433_10041799 3300006852 Bacteria 3974
63 Ga0075429_100007383 3300006880 Bacteria 9541
64 Ga0105240_10003830 3300009093 Bacteria 23260
65 Ga0105240_10011129 3300009093 Bacteria 12572
66 Ga0105240_10030171 3300009093 Bacteria 7053
67 Ga0105240_10080186 3300009093 Bacteria 4015
68 Ga0105240_10082930 3300009093 Bacteria 3936
69 Ga0105240_10090084 3300009093 Bacteria 3750
70 Ga0105245_10081225 3300009098 Bacteria 2963
71 Ga0114129_10000710 3300009147 Bacteria 42045
72 Ga0105241_10063612 3300009174 Bacteria 2847
73 Ga0105242_10018077 3300009176 Bacteria 5506
74 Ga0105237_10011287 3300009545 Bacteria 9452
75 Ga0105237_10023808 3300009545 Bacteria 6268
76 Ga0105237_10052307 3300009545 Bacteria 4100
77 Ga0105249_10044970 3300009553 Bacteria 4015
78 Ga0105239_10121981 3300010375 Bacteria 2895
79 Ga0157373_10000765 3300013100 Bacteria 24875
80 Ga0157373_10013720 3300013100 Bacteria 5940
81 Ga0157371_10001306 3300013102 Bacteria 26185
82 Ga0157371_10028014 3300013102 Bacteria 4082
83 Ga0157370_10001476 3300013104 Bacteria 29099
84 Ga0157370_10006265 3300013104 Bacteria 13174
85 Ga0157370_10007359 3300013104 Bacteria 12005
86 Ga0157370_10050056 3300013104 Bacteria 3995
87 Ga0157370_10115834 3300013104 Bacteria 2503
88 Ga0157369_10064603 3300013105 Bacteria 3941
89 Ga0157369_10173044 3300013105 Unclassified 2274
90 Ga0157374_10176574 3300013296 Unclassified 2085
91 Ga0157378_10011682 3300013297 Bacteria 7686
92 Ga0157372_10000844 3300013307 Bacteria 33248
93 Ga0157372_10053308 3300013307 Bacteria 4508
94 Ga0157372_10179228 3300013307 Bacteria 2453
95 Ga0157375_10017821 3300013308 Bacteria 6423
96 Ga0157379_10022055 3300014968 Bacteria 5643
97 Ga0157379_10040639 3300014968 Bacteria 4152
98 Ga0163161_10107956 3300017792 Bacteria 2078
99 Ga0209026_1003638 3300025250 Bacteria 4944
100 Ga0207692_10025346 3300025898 Bacteria 2769
101 Ga0207688_10000278 3300025901 Bacteria 23334
102 Ga0207680_10029852 3300025903 Bacteria 3068
103 Ga0207699_10067153 3300025906 Bacteria 2179
104 Ga0207645_10002340 3300025907 Bacteria 14953
105 Ga0207643_10006849 3300025908 Bacteria 6115
106 Ga0207684_10059223 3300025910 Bacteria 3251
107 Ga0207684_10062138 3300025910 Bacteria 3171
108 Ga0207707_10058350 3300025912 Bacteria 3359
109 Ga0207707_10060952 3300025912 Unclassified 3282
110 Ga0207695_10075394 3300025913 Bacteria 3432
111 Ga0207695_10088122 3300025913 Unclassified 3125
112 Ga0207663_10008332 3300025916 Bacteria 5414
113 Ga0207663_10075269 3300025916 Bacteria 2190
114 Ga0207657_10000936 3300025919 Bacteria 30891
115 Ga0207657_10020469 3300025919 Bacteria 6251
116 Ga0207649_10044401 3300025920 Bacteria 2721
117 Ga0207649_10130674 3300025920 Bacteria 1705
118 Ga0207652_10152676 3300025921 Bacteria 2068
119 Ga0207646_10005777 3300025922 Bacteria 12955
120 Ga0207646_10051541 3300025922 Bacteria 3682
121 Ga0207681_10014063 3300025923 Bacteria 4962
122 Ga0207659_10023845 3300025926 Bacteria 4091
123 Ga0207700_10112957 3300025928 Bacteria 2189
124 Ga0207664_10028518 3300025929 Bacteria 4243
125 Ga0207644_10006287 3300025931 Bacteria 7737
126 Ga0207644_10053823 3300025931 Bacteria 2897
127 Ga0207644_10061972 3300025931 Bacteria 2710
128 Ga0207690_10001284 3300025932 Bacteria 15861
129 Ga0207706_10000631 3300025933 Bacteria 37435
130 Ga0207706_10042168 3300025933 Bacteria 4045
131 Ga0207706_10083020 3300025933 Bacteria 2816
132 Ga0207689_10009570 3300025942 Bacteria 8358
133 Ga0207679_10050103 3300025945 Bacteria 3049
134 Ga0207667_10027554 3300025949 Bacteria 6182
135 Ga0207712_10054208 3300025961 Bacteria 2815
136 Ga0207658_10003355 3300025986 Bacteria 11356
137 Ga0207658_10028805 3300025986 Unclassified 3915
138 Ga0207678_10019721 3300026067 Bacteria 5931
139 Ga0207676_10051069 3300026095 Bacteria 3226
140 Ga0207676_10104057 3300026095 Bacteria 2360
141 Ga0207674_10000443 3300026116 Bacteria 53792
142 Ga0207674_10026456 3300026116 Bacteria 6160
143 Ga0209971_1007854 3300027682 Bacteria 2530
144 Ga0209974_10011694 3300027876 Bacteria 2943
145 Ga0207428_10077011 3300027907 Bacteria 2611
146 Ga0268266_10000246 3300028379 Bacteria 91633
147 Ga0268266_10030738 3300028379 Bacteria 4561
148 Ga0268264_10075911 3300028381 Unclassified 2859
149 Ga0265318_10005542 3300028577 Bacteria 5923
150 Ga0265338_10008812 3300028800 Bacteria 12174
151 Ga0265324_10000950 3300029957 Bacteria 18084
152 Ga0307511_10000017 3300030521 Bacteria 123976
153 Ga0307511_10000035 3300030521 Bacteria 104063
154 Ga0265330_10007328 3300031235 Bacteria 5385
155 Ga0265328_10000674 3300031239 Bacteria 15857
156 Ga0265328_10005806 3300031239 Bacteria 5267
157 Ga0265328_10010366 3300031239 Bacteria 3756
158 Ga0265320_10004486 3300031240 Bacteria 9141
159 Ga0265320_10044094 3300031240 Bacteria 2200
160 Ga0265331_10000033 3300031250 Bacteria 203767
161 Ga0265331_10002060 3300031250 Bacteria 13916
162 Ga0265331_10002816 3300031250 Bacteria 11529
163 Ga0265327_10001117 3300031251 Bacteria 37108
164 Ga0265327_10004914 3300031251 Bacteria 11533
165 Ga0265316_10017263 3300031344 Bacteria 6244
166 Ga0307509_10000006 3300031507 Bacteria 421538
167 Ga0307509_10000230 3300031507 Bacteria 90240
168 Ga0265313_10001000 3300031595 Bacteria 27748
169 Ga0265313_10019615 3300031595 Bacteria 3757
170 Ga0307508_10150348 3300031616 Unclassified 1933
171 Ga0265314_10001410 3300031711 Bacteria 26944
172 Ga0265342_10041859 3300031712 Bacteria 2770
173 Ga0307405_10017445 3300031731 Bacteria 3939
174 Ga0307410_10005187 3300031852 Bacteria 6862
175 Ga0307406_10006592 3300031901 Bacteria 6417
176 Ga0307411_10019395 3300032005 Bacteria 3928
177 Ga0307415_100037297 3300032126 Bacteria 3193
178 Ga0307415_100053095 3300032126 Bacteria 2760
179 Ga0373955_0046478 3300035172 Unclassified 2347
180 Ga0373927_0009334 3300035695 Bacteria 6581
181 Ga0373927_0021991 3300035695 Bacteria 4179
182 Ga0373937_0016698 3300036401 Bacteria 6523
183 Ga0373937_0073839 3300036401 Bacteria 3147
184 Ga0373925_0039218 3300037068 Bacteria 3504
185 Ga0373925_0062243 3300037068 Bacteria 2806
186 Ga0395900_0066566 3300037418 Bacteria 3702
187 Ga0395898_0058386 3300037466 Bacteria 3756
188 Ga0395901_0076941 3300038443 Bacteria 3482
189 Ga0436365_0553537 3300039437 Bacteria 2900
190 Ga0436361_1083350 3300039447 Bacteria 7925
191 Ga0436363_1629433 3300039450 Bacteria 3349
192 Ga0451577_0019470 3300042876 Bacteria 6241
193 Ga0466969_0007338 3300044656 Bacteria 5860
194 Ga0453684_0000163 3300044712 Bacteria 296196
195 Ga0453684_0076801 3300044712 Bacteria 4191
196 Ga0466959_0018028 3300045049 Bacteria 5180
197 Ga0466959_0022343 3300045049 Bacteria 4676
198 Ga0451576_0008306 3300045051 Bacteria 12205
199 Ga0495580_0000529 3300046472 Bacteria 32288
200 Ga0495580_0003029 3300046472 Bacteria 14393
201 Ga0495586_0051372 3300046535 Bacteria 2231
202 Ga0495645_0064094 3300046543 Bacteria 2660
203 Ga0495604_0071059 3300047317 Unclassified 2634
204 Ga0496102_0013361 3300048905 Bacteria 7112
205 Ga0496105_0129227 3300048908 Bacteria 2083
206 Ga0496106_0010984 3300048909 Bacteria 6695
207 Ga0496107_0020560 3300048910 Bacteria 4664
208 Ga0496114_0121401 3300048917 Bacteria 2247
209 Ga0496115_0012005 3300048918 Bacteria 6510
210 nmdc:mga05p37_2235_c1 3300050507 Bacteria 22561
211 nmdc:mga09592_142_c1 3300050508 Bacteria 24140
212 nmdc:mga06r32_6736_c1 3300050510 Bacteria 10325
213 nmdc:mga0a205_166396_c1 3300050515 Bacteria 2100
214 Ga0500655_002511 3300053133 Bacteria 3337
215 Ga0500655_003742 3300053133 Bacteria 2743
216 Ga0500604_0000776 3300053151 Bacteria 8781

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025920 Ga0207649_10130674 Ga0207649_101306742 450
2 3300037068 Ga0373925_0062243 Ga0373925_0062243_1417_2781 454
3 3300005563 Ga0068855_100029995 Ga0068855_1000299953 490
4 3300028800 Ga0265338_10008812 Ga0265338_1000881211 491
5 3300044656 Ga0466969_0007338 Ga0466969_0007338_2337_3830 494
6 3300005355 Ga0070671_100021742 Ga0070671_1000217424 495
7 3300025903 Ga0207680_10029852 Ga0207680_100298521 495
8 3300025916 Ga0207663_10008332 Ga0207663_100083326 495
9 3300025931 Ga0207644_10006287 Ga0207644_100062872 495
10 3300005548 Ga0070665_100013092 Ga0070665_1000130924 497
11 3300009093 Ga0105240_10090084 Ga0105240_100900842 497
12 3300025913 Ga0207695_10088122 Ga0207695_100881223 497
13 3300028379 Ga0268266_10000246 Ga0268266_1000024625 497
14 3300045049 Ga0466959_0018028 Ga0466959_0018028_2920_4419 499
15 3300005563 Ga0068855_100076105 Ga0068855_1000761053 500
16 3300009093 Ga0105240_10011129 Ga0105240_100111296 500
17 3300009545 Ga0105237_10052307 Ga0105237_100523073 500
18 3300013104 Ga0157370_10007359 Ga0157370_1000735910 500
19 3300013105 Ga0157369_10173044 Ga0157369_101730441 500
20 3300039450 Ga0436363_1629433 Ga0436363_1629433_1714_3276 504
21 3300013297 Ga0157378_10011682 Ga0157378_100116826 505
22 3300031731 Ga0307405_10017445 Ga0307405_100174455 505
23 3300031852 Ga0307410_10005187 Ga0307410_100051876 505
24 3300031901 Ga0307406_10006592 Ga0307406_100065926 505
25 3300032005 Ga0307411_10019395 Ga0307411_100193953 505
26 3300032126 Ga0307415_100037297 Ga0307415_1000372972 505
27 3300013307 Ga0157372_10053308 Ga0157372_100533085 506
28 3300025929 Ga0207664_10028518 Ga0207664_100285183 506
29 3300009093 Ga0105240_10082930 Ga0105240_100829302 508
30 3300037466 Ga0395898_0058386 Ga0395898_0058386_1637_3241 510
31 3300038443 Ga0395901_0076941 Ga0395901_0076941_921_2525 510
32 3300005563 Ga0068855_100001546 Ga0068855_10000154627 511
33 3300005564 Ga0070664_100015726 Ga0070664_1000157263 511
34 3300005614 Ga0068856_100034613 Ga0068856_1000346133 511
35 3300005616 Ga0068852_100015304 Ga0068852_1000153046 511
36 3300013100 Ga0157373_10000765 Ga0157373_1000076525 511
37 3300013102 Ga0157371_10001306 Ga0157371_1000130626 511
38 3300013105 Ga0157369_10064603 Ga0157369_100646033 511
39 3300013307 Ga0157372_10000844 Ga0157372_100008446 511
40 3300025919 Ga0207657_10000936 Ga0207657_1000093614 511
41 3300025920 Ga0207649_10044401 Ga0207649_100444012 511
42 3300025926 Ga0207659_10023845 Ga0207659_100238454 511
43 3300025931 Ga0207644_10053823 Ga0207644_100538231 511
44 3300025932 Ga0207690_10001284 Ga0207690_1000128410 511
45 3300025933 Ga0207706_10000631 Ga0207706_100006317 511
46 3300025945 Ga0207679_10050103 Ga0207679_100501032 511
47 3300025949 Ga0207667_10027554 Ga0207667_100275547 511
48 3300026067 Ga0207678_10019721 Ga0207678_100197218 511
49 3300048905 Ga0496102_0013361 Ga0496102_0013361_4800_6335 511
50 3300048909 Ga0496106_0010984 Ga0496106_0010984_3010_4545 511
51 3300048910 Ga0496107_0020560 Ga0496107_0020560_1919_3454 511
52 3300048908 Ga0496105_0129227 Ga0496105_0129227_506_2047 513
53 3300048918 Ga0496115_0012005 Ga0496115_0012005_4543_6084 513
54 3300009093 Ga0105240_10030171 Ga0105240_100301713 514
55 3300025913 Ga0207695_10075394 Ga0207695_100753943 514
56 3300028379 Ga0268266_10030738 Ga0268266_100307384 514
57 3300031239 Ga0265328_10000674 Ga0265328_1000067419 516
58 3300045049 Ga0466959_0022343 Ga0466959_0022343_2255_3814 516
59 3300009093 Ga0105240_10003830 Ga0105240_1000383010 518
60 3300009545 Ga0105237_10011287 Ga0105237_100112873 518
61 3300013296 Ga0157374_10176574 Ga0157374_101765741 518
62 3300005367 Ga0070667_100000869 Ga0070667_10000086922 523
63 3300005842 Ga0068858_100105940 Ga0068858_1001059402 523
64 3300009553 Ga0105249_10044970 Ga0105249_100449702 523
65 3300014968 Ga0157379_10040639 Ga0157379_100406394 523
66 3300025961 Ga0207712_10054208 Ga0207712_100542082 523
67 3300025986 Ga0207658_10003355 Ga0207658_100033558 523
68 3300046535 Ga0495586_0051372 Ga0495586_0051372_423_1994 523
69 3300005436 Ga0070713_100024260 Ga0070713_1000242605 524
70 3300025916 Ga0207663_10075269 Ga0207663_100752692 524
71 3300031507 Ga0307509_10000230 Ga0307509_1000023070 525
72 3300039447 Ga0436361_1083350 Ga0436361_1083350_4762_6363 525
73 3300048917 Ga0496114_0121401 Ga0496114_0121401_366_1997 525
74 3300025898 Ga0207692_10025346 Ga0207692_100253463 527
75 3300037068 Ga0373925_0039218 Ga0373925_0039218_604_2193 527
76 3300005563 Ga0068855_100001205 Ga0068855_10000120530 528
77 3300031239 Ga0265328_10005806 Ga0265328_100058065 528
78 3300031250 Ga0265331_10002816 Ga0265331_100028166 528
79 3300031251 Ga0265327_10004914 Ga0265327_100049142 528
80 3300005336 Ga0070680_100005640 Ga0070680_1000056403 529
81 3300005367 Ga0070667_100001471 Ga0070667_10000147121 529
82 3300005471 Ga0070698_100005159 Ga0070698_10000515912 529
83 3300013308 Ga0157375_10017821 Ga0157375_100178215 529
84 3300025986 Ga0207658_10028805 Ga0207658_100288054 529
85 3300028381 Ga0268264_10075911 Ga0268264_100759112 529
86 3300042876 Ga0451577_0019470 Ga0451577_0019470_2110_3699 529
87 3300044712 Ga0453684_0076801 Ga0453684_0076801_1510_3099 529
88 3300006847 Ga0075431_100087678 Ga0075431_1000876782 530
89 3300006852 Ga0075433_10041799 Ga0075433_100417992 530
90 3300025910 Ga0207684_10062138 Ga0207684_100621382 530
91 3300030521 Ga0307511_10000035 Ga0307511_1000003595 530
92 3300031616 Ga0307508_10150348 Ga0307508_101503482 530
93 3300035695 Ga0373927_0021991 Ga0373927_0021991_957_2555 530
94 3300050515 nmdc:mga0a205_166396_c1 nmdc:mga0a205_166396_c1_180_1772 530
95 3300025933 Ga0207706_10083020 Ga0207706_100830201 531
96 3300029957 Ga0265324_10000950 Ga0265324_1000095011 531
97 3300031235 Ga0265330_10007328 Ga0265330_100073283 531
98 3300031250 Ga0265331_10000033 Ga0265331_1000003391 531
99 3300031344 Ga0265316_10017263 Ga0265316_100172633 531
100 3300031507 Ga0307509_10000006 Ga0307509_10000006117 531
101 3300031595 Ga0265313_10001000 Ga0265313_1000100020 531
102 3300037418 Ga0395900_0066566 Ga0395900_0066566_1827_3431 531
103 3300044712 Ga0453684_0000163 Ga0453684_0000163_237009_238604 531
104 3300045051 Ga0451576_0008306 Ga0451576_0008306_4574_6169 531
105 3300053133 Ga0500655_002511 Ga0500655_002511_1671_3284 531
106 3300053151 Ga0500604_0000776 Ga0500604_0000776_165_1778 531
107 3300005329 Ga0070683_100032907 Ga0070683_1000329074 532
108 3300005336 Ga0070680_100043868 Ga0070680_1000438684 532
109 3300005339 Ga0070660_100016026 Ga0070660_1000160266 532
110 3300005344 Ga0070661_100099126 Ga0070661_1000991262 532
111 3300005366 Ga0070659_100012520 Ga0070659_1000125205 532
112 3300005435 Ga0070714_100040065 Ga0070714_1000400652 532
113 3300005455 Ga0070663_100098832 Ga0070663_1000988321 532
114 3300005578 Ga0068854_100011051 Ga0068854_1000110516 532
115 3300005834 Ga0068851_10002162 Ga0068851_100021624 532
116 3300009174 Ga0105241_10063612 Ga0105241_100636121 532
117 3300009545 Ga0105237_10023808 Ga0105237_100238086 532
118 3300010375 Ga0105239_10121981 Ga0105239_101219813 532
119 3300013100 Ga0157373_10013720 Ga0157373_100137202 532
120 3300013102 Ga0157371_10028014 Ga0157371_100280144 532
121 3300013104 Ga0157370_10115834 Ga0157370_101158342 532
122 3300013307 Ga0157372_10179228 Ga0157372_101792282 532
123 3300025919 Ga0207657_10020469 Ga0207657_100204694 532
124 3300026116 Ga0207674_10000443 Ga0207674_100004435 532
125 3300031251 Ga0265327_10001117 Ga0265327_1000111721 532
126 3300036401 Ga0373937_0073839 Ga0373937_0073839_1519_3120 532
127 3300046472 Ga0495580_0000529 Ga0495580_0000529_29641_31245 532
128 3300046543 Ga0495645_0064094 Ga0495645_0064094_961_2562 532
129 3300005339 Ga0070660_100000365 Ga0070660_10000036530 533
130 3300005344 Ga0070661_100018040 Ga0070661_1000180406 533
131 3300005354 Ga0070675_100024229 Ga0070675_1000242293 533
132 3300005355 Ga0070671_100050457 Ga0070671_1000504571 533
133 3300005355 Ga0070671_100092852 Ga0070671_1000928521 533
134 3300005366 Ga0070659_100004698 Ga0070659_1000046986 533
135 3300005434 Ga0070709_10022673 Ga0070709_100226734 533
136 3300005435 Ga0070714_100055008 Ga0070714_1000550083 533
137 3300005436 Ga0070713_100054481 Ga0070713_1000544812 533
138 3300005437 Ga0070710_10010607 Ga0070710_100106072 533
139 3300005439 Ga0070711_100039332 Ga0070711_1000393323 533
140 3300005457 Ga0070662_100000291 Ga0070662_1000002912 533
141 3300005518 Ga0070699_100018248 Ga0070699_1000182486 533
142 3300005546 Ga0070696_100004716 Ga0070696_1000047162 533
143 3300009093 Ga0105240_10080186 Ga0105240_100801861 533
144 3300013104 Ga0157370_10006265 Ga0157370_100062655 533
145 3300014968 Ga0157379_10022055 Ga0157379_100220554 533
146 3300025906 Ga0207699_10067153 Ga0207699_100671533 533
147 3300025921 Ga0207652_10152676 Ga0207652_101526762 533
148 3300025928 Ga0207700_10112957 Ga0207700_101129572 533
149 3300027682 Ga0209971_1007854 Ga0209971_10078542 534
150 3300027876 Ga0209974_10011694 Ga0209974_100116943 534
151 3300031240 Ga0265320_10004486 Ga0265320_100044862 535
152 3300035172 Ga0373955_0046478 Ga0373955_0046478_261_1880 535
153 3300036401 Ga0373937_0016698 Ga0373937_0016698_3789_5408 535
154 3300047317 Ga0495604_0071059 Ga0495604_0071059_604_2223 535
155 3300032126 Ga0307415_100053095 Ga0307415_1000530953 536
156 3300005445 Ga0070708_100056373 Ga0070708_1000563732 538
157 3300005458 Ga0070681_10016362 Ga0070681_100163626 538
158 3300005467 Ga0070706_100032715 Ga0070706_1000327156 538
159 3300005467 Ga0070706_100039779 Ga0070706_1000397793 538
160 3300005468 Ga0070707_100033432 Ga0070707_1000334323 538
161 3300025250 Ga0209026_1003638 Ga0209026_10036381 538
162 3300025910 Ga0207684_10059223 Ga0207684_100592233 538
163 3300025912 Ga0207707_10058350 Ga0207707_100583501 538
164 3300025922 Ga0207646_10005777 Ga0207646_100057776 538
165 3300025922 Ga0207646_10051541 Ga0207646_100515411 538
166 3300030521 Ga0307511_10000017 Ga0307511_1000001730 539
167 3300031595 Ga0265313_10019615 Ga0265313_100196152 540
168 3300031712 Ga0265342_10041859 Ga0265342_100418592 540
169 3300035695 Ga0373927_0009334 Ga0373927_0009334_3457_5088 541
170 3300039437 Ga0436365_0553537 Ga0436365_0553537_522_2150 541
171 3300005458 Ga0070681_10136072 Ga0070681_101360722 542
172 3300025912 Ga0207707_10060952 Ga0207707_100609522 542
173 3300006847 Ga0075431_100008206 Ga0075431_1000082069 543
174 3300006880 Ga0075429_100007383 Ga0075429_10000738313 543
175 3300009147 Ga0114129_10000710 Ga0114129_1000071021 543
176 3300050507 nmdc:mga05p37_2235_c1 nmdc:mga05p37_2235_c1_16740_18371 543
177 3300050508 nmdc:mga09592_142_c1 nmdc:mga09592_142_c1_5716_7347 543
178 3300050510 nmdc:mga06r32_6736_c1 nmdc:mga06r32_6736_c1_5624_7255 543
179 3300030521 Ga0307511_10000017 Ga0307511_1000001731 545
180 3300046472 Ga0495580_0003029 Ga0495580_0003029_2414_4054 545
181 3300053133 Ga0500655_003742 Ga0500655_003742_248_2092 545
182 3300053151 Ga0500604_0000776 Ga0500604_0000776_1944_3788 545
183 3300013104 Ga0157370_10050056 Ga0157370_100500562 546
184 3300013104 Ga0157370_10001476 Ga0157370_100014768 547
185 3300005439 Ga0070711_100010667 Ga0070711_1000106676 548
186 3300005340 Ga0070689_100049585 Ga0070689_1000495853 549
187 3300005355 Ga0070671_100031947 Ga0070671_1000319476 549
188 3300005564 Ga0070664_100175146 Ga0070664_1001751462 549
189 3300005618 Ga0068864_100117974 Ga0068864_1001179742 549
190 3300005842 Ga0068858_100018256 Ga0068858_1000182563 549
191 3300005843 Ga0068860_100136087 Ga0068860_1001360872 549
192 3300006358 Ga0068871_100019352 Ga0068871_1000193523 549
193 3300009098 Ga0105245_10081225 Ga0105245_100812252 549
194 3300025933 Ga0207706_10042168 Ga0207706_100421681 549
195 3300026095 Ga0207676_10104057 Ga0207676_101040572 549
196 3300027907 Ga0207428_10077011 Ga0207428_100770112 549
197 3300005293 Ga0065715_10114356 Ga0065715_101143562 550
198 3300005334 Ga0068869_100030060 Ga0068869_1000300602 550
199 3300005347 Ga0070668_100035697 Ga0070668_1000356972 550
200 3300005353 Ga0070669_100041796 Ga0070669_1000417963 550
201 3300005438 Ga0070701_10042320 Ga0070701_100423201 550
202 3300005459 Ga0068867_100044398 Ga0068867_1000443982 550
203 3300005844 Ga0068862_100015318 Ga0068862_1000153189 550
204 3300009176 Ga0105242_10018077 Ga0105242_100180772 550
205 3300017792 Ga0163161_10107956 Ga0163161_101079562 550
206 3300025901 Ga0207688_10000278 Ga0207688_1000027818 550
207 3300025907 Ga0207645_10002340 Ga0207645_1000234017 550
208 3300025908 Ga0207643_10006849 Ga0207643_100068494 550
209 3300025923 Ga0207681_10014063 Ga0207681_100140632 550
210 3300025931 Ga0207644_10061972 Ga0207644_100619722 550
211 3300025942 Ga0207689_10009570 Ga0207689_100095704 550
212 3300026095 Ga0207676_10051069 Ga0207676_100510693 550
213 3300026116 Ga0207674_10026456 Ga0207674_100264564 550
214 3300028577 Ga0265318_10005542 Ga0265318_100055423 550
215 3300031239 Ga0265328_10010366 Ga0265328_100103662 550
216 3300031240 Ga0265320_10044094 Ga0265320_100440941 550
217 3300031250 Ga0265331_10002060 Ga0265331_1000206012 550
218 3300031711 Ga0265314_10001410 Ga0265314_1000141016 550

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00614

PLDc

Phospholipase D Active site motif

248

275

0.96

PF00614

PLDc

Phospholipase D Active site motif

493

520

0.93

PF13091

PLDc_2

PLD-like domain

400

548

0.91

PF13091

PLDc_2

PLD-like domain

154

307

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8208 315 488
6ehi-assembly5.cif.gz_J nuct from helicobacter pylori 0.7823 315 489
2f5t-assembly1.cif.gz_X-2 crystal structure of the sugar binding domain of the archaeal transcriptional regulator trmb 0.7602 81 240
5bpd-assembly1.cif.gz_A structure of trmbl2, an archaeal chromatin protein, shows a novel mode of dna binding. 0.751 81 255
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.751 315 488
ID Description Score Start End Superfamily
af_P75919_18_205_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9437 79 268 3.30.870.10
af_P75919_18_205_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9293 79 268 3.30.870.10
af_P0AA84_201_339_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9285 338 488 3.30.870.10
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9277 336 490 3.30.870.10
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9258 338 488 3.30.870.10
ID Description Score Start End GO Terms
AF-T0YW93-F1-model_v4 Phospholipase D family protein 0.9882 96 550 GO:0030572
GO:0032049
AF-T0YW93-F1-model_v4 Phospholipase D family protein 0.9839 96 550 GO:0030572
GO:0032049
AF-A0A661BZ28-F1-model_v4 Phospholipase D family protein 0.9421 84 550 GO:0030572
GO:0032049
AF-A0A7V6YA68-F1-model_v4 deleted 0.9391 39 263
AF-A0A661BZ28-F1-model_v4 Phospholipase D family protein 0.9381 84 550 GO:0030572
GO:0032049

Feature Viewer

pLDDT pTM Quality
89.22 0.88 High
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Predicted Structure (AlphaFold2)

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