F329270

General Info

Members Datasets Scaffolds Average Seq Length
217 161 434 255

Family's Representative Sequence

Representative Sequence 3300049706|Ga0501229_011094|Ga0501229_011094_115_945
Length 276
Sequence MPLIWFDNARSETMMDHVGKVALVTGGGNGIGRATALAFAKNGARLILVDRDEAAGEAVAAEIRQKGGEARFVAADVTRTADVQNYVNLALDSYGRIDCFHNNAGIEGVLAPIVDYDEAEFDRVMAINVKGVFLGLKYVLPVMLRQKSGAVVNSASVGALNGSPGLVPYTASKHAVLGITRTASSEVARQGVRVNAICPGSVETRMIQSIMAMGNPSDPEAASRLNAENTPTGRFSRPDEVAGLVLYLCSDIAANITGAHFVIDGGRTGTIGPFTR

Samples

Sample ID Description Type Environment
1 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
95 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
123 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
124 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
125 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
126 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
127 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
128 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
136 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2643221733 Bosea sp. Root381 Isolate Unclassified
150 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
151 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
152 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
153 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
154 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
155 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
156 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
157 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
158 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
159 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
160 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
161 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.01
Metatranscriptomes 0
Isolates 5.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.29
Nodule 0
Rhizoplane 5.53
Rhizosphere 80.18
Stem 0
Stem Tuber 0
Unclassified 10.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501229_011094 3300049706 Bacteria 1141
2 JGI25151J46595_10005915 3300003187 Bacteria 6240
3 JGI25151J46595_10010961 3300003187 Bacteria 4190
4 Ga0055538_1000468 3300003751 Bacteria 14957
5 Ga0070690_100110944 3300005330 Bacteria 1830
6 Ga0070666_10147705 3300005335 Bacteria 1639
7 Ga0070689_100314756 3300005340 Bacteria 1306
8 Ga0070687_100086711 3300005343 Unclassified 1721
9 Ga0070661_100078829 3300005344 Bacteria 2430
10 Ga0070675_100012847 3300005354 Bacteria 6571
11 Ga0070673_100597231 3300005364 Bacteria 1006
12 Ga0070714_100155999 3300005435 Bacteria 2061
13 Ga0070714_100421505 3300005435 Bacteria 1264
14 Ga0070713_100044548 3300005436 Bacteria 3632
15 Ga0070713_100183487 3300005436 Bacteria 1881
16 Ga0070713_100699716 3300005436 Bacteria 967
17 Ga0070710_10021802 3300005437 Bacteria 3343
18 Ga0070711_100456412 3300005439 Bacteria 1047
19 Ga0068867_100037821 3300005459 Bacteria 3510
20 Ga0070706_100073376 3300005467 Bacteria 3167
21 Ga0070698_100000541 3300005471 Bacteria 40363
22 Ga0070697_100012042 3300005536 Bacteria 6770
23 Ga0070672_100057124 3300005543 Bacteria 3062
24 Ga0070672_100515153 3300005543 Bacteria 1036
25 Ga0070686_100048379 3300005544 Bacteria 2694
26 Ga0070664_100029830 3300005564 Unclassified 4548
27 Ga0068854_100614223 3300005578 Bacteria 930
28 Ga0068856_100142968 3300005614 Bacteria 2400
29 Ga0070702_100011497 3300005615 Bacteria 4404
30 Ga0068852_100560773 3300005616 Unclassified 1143
31 Ga0068852_100608473 3300005616 Unclassified 1097
32 Ga0068864_100706817 3300005618 Bacteria 985
33 Ga0068861_100501723 3300005719 Unclassified 1097
34 Ga0068858_100336122 3300005842 Bacteria 1445
35 Ga0068862_100369773 3300005844 Bacteria 1334
36 Ga0081539_10001753 3300005985 Bacteria 34603
37 Ga0070717_10020891 3300006028 Bacteria 5154
38 Ga0075365_10025012 3300006038 Bacteria 3775
39 Ga0070712_100101583 3300006175 Unclassified 2128
40 Ga0075369_10006795 3300006186 Bacteria 4341
41 Ga0068871_100254934 3300006358 Bacteria 1529
42 Ga0068871_100561367 3300006358 Bacteria 1035
43 Ga0075430_100047587 3300006846 Bacteria 3622
44 Ga0075431_100026056 3300006847 Bacteria 5995
45 Ga0075431_100036456 3300006847 Bacteria 5065
46 Ga0075431_100142564 3300006847 Bacteria 2470
47 Ga0075429_100028344 3300006880 Bacteria 4863
48 Ga0097620_100506900 3300006931 Bacteria 1302
49 Ga0099794_10046080 3300007265 Bacteria 2087
50 Ga0105250_10010511 3300009092 Bacteria 3856
51 Ga0114129_10036764 3300009147 Bacteria 6914
52 Ga0114129_10072634 3300009147 Bacteria 4796
53 Ga0114129_10379697 3300009147 Bacteria 1866
54 Ga0105238_10555410 3300009551 Unclassified 1153
55 Ga0105035_106145 3300009988 Bacteria 989
56 Ga0105246_10299613 3300011119 Bacteria 1297
57 Ga0157374_10000007 3300013296 Bacteria 595643
58 Ga0157374_10246809 3300013296 Unclassified 1756
59 Ga0157378_10021498 3300013297 Bacteria 5674
60 Ga0157375_10281789 3300013308 Bacteria 1825
61 Ga0157377_10011589 3300014745 Unclassified 4407
62 Ga0157376_10000592 3300014969 Bacteria 23395
63 Ga0209784_100102 3300025224 Bacteria 99732
64 Ga0209784_100106 3300025224 Bacteria 98148
65 Ga0209675_1010864 3300025291 Bacteria 3068
66 Ga0209676_1029440 3300025292 Bacteria 1695
67 Ga0209025_1000698 3300025294 Bacteria 57275
68 Ga0209025_1005370 3300025294 Bacteria 10489
69 Ga0209025_1024755 3300025294 Bacteria 3087
70 Ga0209025_1043740 3300025294 Bacteria 1882
71 Ga0207696_1052553 3300025711 Bacteria 1161
72 Ga0207688_10078868 3300025901 Unclassified 1878
73 Ga0207699_10146004 3300025906 Bacteria 1559
74 Ga0207684_10177120 3300025910 Bacteria 1838
75 Ga0207693_10476324 3300025915 Bacteria 975
76 Ga0207663_10356546 3300025916 Unclassified 1108
77 Ga0207649_10418782 3300025920 Unclassified 1005
78 Ga0207659_10071221 3300025926 Unclassified 2538
79 Ga0207700_10589957 3300025928 Unclassified 988
80 Ga0207690_10444683 3300025932 Bacteria 1041
81 Ga0207665_10123165 3300025939 Unclassified 1833
82 Ga0207679_10622560 3300025945 Unclassified 974
83 Ga0207651_10355037 3300025960 Bacteria 1236
84 Ga0207677_10202243 3300026023 Bacteria 1580
85 Ga0207703_10302319 3300026035 Bacteria 1459
86 Ga0207648_10250361 3300026089 Bacteria 1579
87 Ga0207676_10318746 3300026095 Bacteria 1426
88 Ga0207675_100543924 3300026118 Unclassified 1160
89 Ga0207698_10209568 3300026142 Bacteria 1752
90 Ga0207698_10398356 3300026142 Unclassified 1315
91 Ga0268265_10474410 3300028380 Bacteria 1174
92 Ga0268264_10351326 3300028381 Bacteria 1403
93 Ga0307413_10442159 3300031824 Bacteria 1030
94 Ga0307407_10264005 3300031903 Bacteria 1185
95 Ga0307412_10000811 3300031911 Bacteria 17991
96 Ga0307416_100149934 3300032002 Bacteria 2137
97 Ga0307411_10087546 3300032005 Bacteria 2163
98 Ga0307415_100183895 3300032126 Bacteria 1643
99 Ga0373925_0349811 3300037068 Bacteria 1200
100 Ga0395898_0112265 3300037466 Bacteria 2612
101 Ga0436364_0595453 3300037853 Bacteria 1125
102 Ga0395901_0037884 3300038443 Bacteria 4986
103 Ga0395901_0047420 3300038443 Bacteria 4461
104 Ga0436365_1319229 3300039437 Bacteria 7122
105 Ga0439441_022945 3300042001 Bacteria 1163
106 Ga0466959_0368237 3300045049 Unclassified 979
107 Ga0451576_0723746 3300045051 Unclassified 1045
108 Ga0495625_0061753 3300046660 Bacteria 2651
109 Ga0496101_0590237 3300048904 Bacteria 878
110 Ga0496102_0151822 3300048905 Unclassified 2177
111 Ga0496104_0005355 3300048907 Bacteria 11230
112 Ga0496105_0098962 3300048908 Unclassified 2408
113 Ga0496107_0212365 3300048910 Bacteria 1439
114 Ga0496109_0302886 3300048912 Bacteria 1507
115 Ga0496110_0085425 3300048913 Bacteria 2817
116 Ga0496111_0198546 3300048914 Bacteria 1491
117 Ga0496112_0134712 3300048915 Bacteria 2441
118 Ga0496113_0055669 3300048916 Bacteria 2966
119 Ga0496114_0013712 3300048917 Bacteria 6498
120 Ga0496115_0011385 3300048918 Bacteria 6666
121 Ga0496125_0036424 3300048928 Bacteria 4297
122 Ga0501034_0003849 3300049571 Bacteria 16909
123 Ga0501034_0173746 3300049571 Bacteria 2121
124 Ga0501036_0246714 3300049572 Bacteria 1497
125 Ga0501038_0125283 3300049574 Bacteria 2115
126 Ga0501039_0051258 3300049575 Bacteria 3194
127 Ga0501040_0003820 3300049576 Bacteria 9773
128 Ga0501040_0078452 3300049576 Bacteria 2285
129 Ga0501040_0268751 3300049576 Bacteria 1217
130 Ga0501040_0354393 3300049576 Bacteria 1051
131 Ga0501041_0009812 3300049577 Bacteria 5637
132 Ga0501042_0109359 3300049578 Bacteria 1990
133 Ga0501042_0293916 3300049578 Bacteria 1173
134 Ga0501043_0126019 3300049579 Bacteria 2008
135 Ga0501046_0127028 3300049580 Bacteria 1936
136 Ga0501046_0216222 3300049580 Bacteria 1421
137 Ga0501046_0356488 3300049580 Bacteria 1061
138 Ga0501047_0095402 3300049581 Bacteria 2853
139 Ga0501047_0502868 3300049581 Bacteria 1039
140 Ga0501048_0034259 3300049582 Bacteria 3665
141 Ga0501048_0177236 3300049582 Bacteria 1511
142 Ga0501067_0030928 3300049583 Bacteria 2970
143 Ga0501068_0023263 3300049584 Bacteria 3630
144 Ga0501071_0113794 3300049587 Bacteria 2001
145 Ga0501071_0122345 3300049587 Bacteria 1929
146 Ga0501071_0159632 3300049587 Bacteria 1685
147 Ga0501072_0135587 3300049588 Bacteria 1963
148 Ga0501072_0142172 3300049588 Bacteria 1913
149 Ga0501072_0289444 3300049588 Bacteria 1302
150 Ga0501075_0024905 3300049591 Bacteria 4393
151 Ga0501075_0102181 3300049591 Bacteria 2177
152 Ga0501075_0262593 3300049591 Bacteria 1316
153 Ga0501076_0007189 3300049592 Bacteria 8095
154 Ga0501076_0015353 3300049592 Bacteria 5787
155 Ga0501076_0078060 3300049592 Bacteria 2657
156 Ga0501077_0083639 3300049593 Bacteria 2022
157 Ga0501077_0195635 3300049593 Bacteria 1284
158 Ga0501198_013772 3300049649 Bacteria 1227
159 Ga0501223_000075 3300049663 Bacteria 30250
160 Ga0501224_002279 3300049664 Bacteria 2599
161 Ga0501233_000179 3300049668 Bacteria 9197
162 Ga0501233_037618 3300049668 Bacteria 1124
163 Ga0501235_002264 3300049669 Bacteria 4143
164 Ga0501235_045522 3300049669 Bacteria 1009
165 Ga0501225_0000113 3300049705 Bacteria 25146
166 Ga0501225_0072183 3300049705 Bacteria 982
167 Ga0501234_000194 3300049707 Bacteria 8589
168 Ga0501079_0008699 3300049741 Bacteria 7698
169 Ga0501079_0023335 3300049741 Bacteria 4748
170 Ga0501079_0089845 3300049741 Bacteria 2379
171 Ga0501080_0050220 3300049742 Bacteria 3883
172 Ga0501080_0066442 3300049742 Bacteria 3354
173 Ga0501080_0518914 3300049742 Bacteria 1063
174 Ga0501081_0045531 3300049743 Bacteria 3013
175 Ga0501081_0367040 3300049743 Bacteria 1062
176 Ga0501083_0009881 3300049744 Bacteria 6737
177 Ga0501044_0136719 3300049823 Bacteria 2442
178 Ga0501044_0222344 3300049823 Bacteria 1839
179 Ga0501045_0003546 3300049824 Bacteria 10711
180 Ga0501045_0174304 3300049824 Bacteria 1602
181 Ga0501045_0253111 3300049824 Bacteria 1311
182 Ga0501226_001921 3300049853 Bacteria 2599
183 nmdc:mga03683_298332_c1 3300050489 Bacteria 755
184 nmdc:mga0yw44_14967_c1 3300050492 Bacteria 4139
185 nmdc:mga06z11_89821_c1 3300050494 Bacteria 1665
186 nmdc:mga05p37_118450_c1 3300050507 Bacteria 3254
187 nmdc:mga09592_20351_c1 3300050508 Bacteria 5455
188 nmdc:mga0qj67_627766_c1 3300050509 Bacteria 858
189 nmdc:mga06r32_115864_c1 3300050510 Bacteria 2640
190 nmdc:mga06r32_141023_c1 3300050510 Bacteria 2386
191 nmdc:mga06r32_213522_c1 3300050510 Bacteria 1917
192 nmdc:mga08y16_763972_c1 3300050511 Bacteria 962
193 nmdc:mga0sz30_933_c2 3300050516 Bacteria 5090
194 Ga0500616_0009780 3300053153 Bacteria 5786
195 Ga0501084_0002976 3300054114 Bacteria 13722
196 Ga0501084_0003392 3300054114 Bacteria 12916
197 Ga0501084_0168325 3300054114 Bacteria 1850
198 Ga0501082_0015747 3300060353 Bacteria 6504
199 Ga0501082_0037903 3300060353 Bacteria 4157
200 Ga0501082_0051850 3300060353 Bacteria 3536
201 Ga0501082_0177328 3300060353 Bacteria 1853
202 Ga0501082_0663998 3300060353 Bacteria 912
203 Ga0530510_0059449 3300061734 Bacteria 2765
204 Ga0530510_0454548 3300061734 Bacteria 968
205 2644731053 2643221733 Bacteria 5690728
206 2791212645 2788500588 Bacteria 4584915
207 2819626754 2818991451 Bacteria 4697364
208 2857461952 2857460504 Bacteria 5194327
209 2857468608 2857465823 Bacteria 6772595
210 2857595590 2857591370 Bacteria 6569758
211 2865005546 2865002811 Bacteria 6333767
212 2904606911 2904606771 Bacteria 4684500
213 2904758235 2904755435 Bacteria 7986759
214 2929202310 2929199973 Bacteria 7260745
215 2929208487 2929206907 Bacteria 5918291
216 8055913803 8055909800 Bacteria 7278581
217 8057633130 8057632132 Bacteria 4726859
218 Ga0501229_011094
219 JGI25151J46595_10005915
220 JGI25151J46595_10010961
221 Ga0055538_1000468
222 Ga0070690_100110944
223 Ga0070666_10147705
224 Ga0070689_100314756
225 Ga0070687_100086711
226 Ga0070661_100078829
227 Ga0070675_100012847
228 Ga0070673_100597231
229 Ga0070714_100155999
230 Ga0070714_100421505
231 Ga0070713_100044548
232 Ga0070713_100183487
233 Ga0070713_100699716
234 Ga0070710_10021802
235 Ga0070711_100456412
236 Ga0068867_100037821
237 Ga0070706_100073376
238 Ga0070698_100000541
239 Ga0070697_100012042
240 Ga0070672_100057124
241 Ga0070672_100515153
242 Ga0070686_100048379
243 Ga0070664_100029830
244 Ga0068854_100614223
245 Ga0068856_100142968
246 Ga0070702_100011497
247 Ga0068852_100560773
248 Ga0068852_100608473
249 Ga0068864_100706817
250 Ga0068861_100501723
251 Ga0068858_100336122
252 Ga0068862_100369773
253 Ga0081539_10001753
254 Ga0070717_10020891
255 Ga0075365_10025012
256 Ga0070712_100101583
257 Ga0075369_10006795
258 Ga0068871_100254934
259 Ga0068871_100561367
260 Ga0075430_100047587
261 Ga0075431_100026056
262 Ga0075431_100036456
263 Ga0075431_100142564
264 Ga0075429_100028344
265 Ga0097620_100506900
266 Ga0099794_10046080
267 Ga0105250_10010511
268 Ga0114129_10036764
269 Ga0114129_10072634
270 Ga0114129_10379697
271 Ga0105238_10555410
272 Ga0105035_106145
273 Ga0105246_10299613
274 Ga0157374_10000007
275 Ga0157374_10246809
276 Ga0157378_10021498
277 Ga0157375_10281789
278 Ga0157377_10011589
279 Ga0157376_10000592
280 Ga0209784_100102
281 Ga0209784_100106
282 Ga0209675_1010864
283 Ga0209676_1029440
284 Ga0209025_1000698
285 Ga0209025_1005370
286 Ga0209025_1024755
287 Ga0209025_1043740
288 Ga0207696_1052553
289 Ga0207688_10078868
290 Ga0207699_10146004
291 Ga0207684_10177120
292 Ga0207693_10476324
293 Ga0207663_10356546
294 Ga0207649_10418782
295 Ga0207659_10071221
296 Ga0207700_10589957
297 Ga0207690_10444683
298 Ga0207665_10123165
299 Ga0207679_10622560
300 Ga0207651_10355037
301 Ga0207677_10202243
302 Ga0207703_10302319
303 Ga0207648_10250361
304 Ga0207676_10318746
305 Ga0207675_100543924
306 Ga0207698_10209568
307 Ga0207698_10398356
308 Ga0268265_10474410
309 Ga0268264_10351326
310 Ga0307413_10442159
311 Ga0307407_10264005
312 Ga0307412_10000811
313 Ga0307416_100149934
314 Ga0307411_10087546
315 Ga0307415_100183895
316 Ga0373925_0349811
317 Ga0395898_0112265
318 Ga0436364_0595453
319 Ga0395901_0037884
320 Ga0395901_0047420
321 Ga0436365_1319229
322 Ga0439441_022945
323 Ga0466959_0368237
324 Ga0451576_0723746
325 Ga0495625_0061753
326 Ga0496101_0590237
327 Ga0496102_0151822
328 Ga0496104_0005355
329 Ga0496105_0098962
330 Ga0496107_0212365
331 Ga0496109_0302886
332 Ga0496110_0085425
333 Ga0496111_0198546
334 Ga0496112_0134712
335 Ga0496113_0055669
336 Ga0496114_0013712
337 Ga0496115_0011385
338 Ga0496125_0036424
339 Ga0501034_0003849
340 Ga0501034_0173746
341 Ga0501036_0246714
342 Ga0501038_0125283
343 Ga0501039_0051258
344 Ga0501040_0003820
345 Ga0501040_0078452
346 Ga0501040_0268751
347 Ga0501040_0354393
348 Ga0501041_0009812
349 Ga0501042_0109359
350 Ga0501042_0293916
351 Ga0501043_0126019
352 Ga0501046_0127028
353 Ga0501046_0216222
354 Ga0501046_0356488
355 Ga0501047_0095402
356 Ga0501047_0502868
357 Ga0501048_0034259
358 Ga0501048_0177236
359 Ga0501067_0030928
360 Ga0501068_0023263
361 Ga0501071_0113794
362 Ga0501071_0122345
363 Ga0501071_0159632
364 Ga0501072_0135587
365 Ga0501072_0142172
366 Ga0501072_0289444
367 Ga0501075_0024905
368 Ga0501075_0102181
369 Ga0501075_0262593
370 Ga0501076_0007189
371 Ga0501076_0015353
372 Ga0501076_0078060
373 Ga0501077_0083639
374 Ga0501077_0195635
375 Ga0501198_013772
376 Ga0501223_000075
377 Ga0501224_002279
378 Ga0501233_000179
379 Ga0501233_037618
380 Ga0501235_002264
381 Ga0501235_045522
382 Ga0501225_0000113
383 Ga0501225_0072183
384 Ga0501234_000194
385 Ga0501079_0008699
386 Ga0501079_0023335
387 Ga0501079_0089845
388 Ga0501080_0050220
389 Ga0501080_0066442
390 Ga0501080_0518914
391 Ga0501081_0045531
392 Ga0501081_0367040
393 Ga0501083_0009881
394 Ga0501044_0136719
395 Ga0501044_0222344
396 Ga0501045_0003546
397 Ga0501045_0174304
398 Ga0501045_0253111
399 Ga0501226_001921
400 nmdc:mga03683_298332_c1
401 nmdc:mga0yw44_14967_c1
402 nmdc:mga06z11_89821_c1
403 nmdc:mga05p37_118450_c1
404 nmdc:mga09592_20351_c1
405 nmdc:mga0qj67_627766_c1
406 nmdc:mga06r32_115864_c1
407 nmdc:mga06r32_141023_c1
408 nmdc:mga06r32_213522_c1
409 nmdc:mga08y16_763972_c1
410 nmdc:mga0sz30_933_c2
411 Ga0500616_0009780
412 Ga0501084_0002976
413 Ga0501084_0003392
414 Ga0501084_0168325
415 Ga0501082_0015747
416 Ga0501082_0037903
417 Ga0501082_0051850
418 Ga0501082_0177328
419 Ga0501082_0663998
420 Ga0530510_0059449
421 Ga0530510_0454548
422 2644731053
423 2791212645
424 2819626754
425 2857461952
426 2857468608
427 2857595590
428 2865005546
429 2904606911
430 2904758235
431 2929202310
432 2929208487
433 8055913803
434 8057633130

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

20

215

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

26

268

0.92

PF08659

KR

KR domain

20

198

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7djs-assembly1.cif.gz_C crystal structure of isopiperitenol dehydrogenase from pseudomonas aeruginosa complexed with nad 0.9743 3 251
7djs-assembly1.cif.gz_A crystal structure of isopiperitenol dehydrogenase from pseudomonas aeruginosa complexed with nad 0.968 3 251
4nim-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from brucella melitensis 0.9586 1 247
7djs-assembly1.cif.gz_C crystal structure of isopiperitenol dehydrogenase from pseudomonas aeruginosa complexed with nad 0.9578 3 251
5k9z-assembly2.cif.gz_D crystal structure of putative short-chain dehydrogenase/reductase from burkholderia xenovorans lb400 0.9572 2 252
ID Description Score Start End Superfamily
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9725 3 184 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9701 3 86 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9605 3 196 3.40.50.720
4nimA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9586 1 247 3.40.50.720
5k9zA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.958 1 252 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N6R9H9-F1-model_v4 deleted 0.9883 2 252
AF-A0A2N6R9H9-F1-model_v4 deleted 0.9805 2 252
AF-A0A3Q1FIK6-F1-model_v4 Dehydrogenase/reductase SDR family member 4-like 0.969 3 195 GO:0004090
AF-V7B7N8-F1-model_v4 Tropinone reductase 0.9643 2 200 GO:0016491
AF-A0A523FQP8-F1-model_v4 SDR family oxidoreductase 0.9545 2 252 GO:0016491

Map