F329231

General Info

Members Datasets Scaffolds Average Seq Length
217 172 434 256

Family's Representative Sequence

Representative Sequence 3300049161|Ga0501305_011146|Ga0501305_011146_255_1043
Length 262
Sequence VSVLEIRGLHVSVGEGDDAKEILRGVDLTVRSGETHAIMGPNGSGKSTLAYSIAGHPKYTITGGTVTLDGEDVLAMSVDERARAGLFLAMQYPVEVPGVSVSNFLRTAATAVTGEAPKLRTWVKDVRTEMGALEMDPAFAERNVNEGFSGGEKKRHEILQMRLLKPRIAILDETDSGLDVDALRVVSEGVNRSREDSDVGVMLITHYTRILRYIRPDFVHVFVAGRIVDEGGSELADKLENEGYAAYVKDSNEQAAAEVARA

Samples

Sample ID Description Type Environment
1 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003568 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_24 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
10 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
12 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
84 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
155 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 2501939600 Micromonospora sp. L5 Isolate Unclassified
163 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
164 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
165 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
166 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
167 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
168 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
169 2855683550 Micromonospora sp. RP3T Isolate Unclassified
170 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
171 649633069 Micromonospora sp. L5 Isolate Unclassified
172 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.25
Metatranscriptomes 9.68
Isolates 5.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.92
Nodule 0
Rhizoplane 10.6
Rhizosphere 82.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501305_011146 3300049161 Bacteria 1210
2 LJQas_1009752 3300000549 Bacteria 1155
3 Ga0006778J45830_1006628 3300003162 Bacteria 4308
4 Ga0006759J45824_1032779 3300003163 Bacteria 1140
5 JGI25406J46586_10022818 3300003203 Bacteria 2485
6 Ga0006781J51513_1008498 3300003568 Bacteria 941
7 Ga0007410J51695_1019033 3300003574 Bacteria 1275
8 Ga0007416J51690_1049926 3300003577 Bacteria 1240
9 Ga0007429J51699_1010708 3300003579 Bacteria 1085
10 Ga0032354_1041617 3300003693 Bacteria 1162
11 Ga0006780_1003772 3300003735 Bacteria 1236
12 Ga0058861_11984128 3300004800 Bacteria 2581
13 Ga0058862_10091935 3300004803 Bacteria 1668
14 Ga0070683_100137918 3300005329 Bacteria 2311
15 Ga0070682_100141514 3300005337 Bacteria 1640
16 Ga0068868_100218985 3300005338 Bacteria 1593
17 Ga0070691_10019005 3300005341 Bacteria 3167
18 Ga0070659_100399736 3300005366 Bacteria 1160
19 Ga0070709_10153024 3300005434 Bacteria 1596
20 Ga0070714_100003855 3300005435 Bacteria 11262
21 Ga0070713_100076156 3300005436 Bacteria 2848
22 Ga0070708_100071032 3300005445 Bacteria 3133
23 Ga0070681_10470281 3300005458 Bacteria 1170
24 Ga0070706_100419508 3300005467 Bacteria 1245
25 Ga0070707_100573639 3300005468 Bacteria 1090
26 Ga0070698_100459952 3300005471 Bacteria 1208
27 Ga0070699_100166697 3300005518 Bacteria 1951
28 Ga0070684_100187877 3300005535 Bacteria 1879
29 Ga0070684_100602495 3300005535 Bacteria 1021
30 Ga0070697_100380928 3300005536 Bacteria 1222
31 Ga0070665_100193799 3300005548 Bacteria 2033
32 Ga0070665_100207868 3300005548 Bacteria 1958
33 Ga0068852_100477431 3300005616 Bacteria 1238
34 Ga0068852_100518098 3300005616 Bacteria 1189
35 Ga0068858_100060015 3300005842 Bacteria 3516
36 Ga0068860_100106110 3300005843 Bacteria 2683
37 Ga0081455_10072855 3300005937 Bacteria 2842
38 Ga0081540_1006583 3300005983 Bacteria 8431
39 Ga0081539_10004729 3300005985 Bacteria 14726
40 Ga0081539_10035617 3300005985 Bacteria 2988
41 Ga0070717_10405246 3300006028 Bacteria 1225
42 Ga0070716_100227305 3300006173 Bacteria 1257
43 Ga0097621_100082779 3300006237 Bacteria 2673
44 Ga0068871_100044512 3300006358 Bacteria 3570
45 Ga0105245_10025570 3300009098 Bacteria 5193
46 Ga0105245_10358612 3300009098 Bacteria 1446
47 Ga0105247_10186512 3300009101 Bacteria 1387
48 Ga0105242_10136639 3300009176 Bacteria 2123
49 Ga0105248_10083851 3300009177 Bacteria 3585
50 Ga0105248_10337561 3300009177 Bacteria 1697
51 Ga0105248_10761826 3300009177 Bacteria 1092
52 Ga0105238_10704437 3300009551 Bacteria 1022
53 Ga0105238_10799005 3300009551 Bacteria 959
54 Ga0157369_10028010 3300013105 Bacteria 6240
55 Ga0157374_10035097 3300013296 Bacteria 4586
56 Ga0163162_10272863 3300013306 Bacteria 1823
57 Ga0157372_10028842 3300013307 Bacteria 6058
58 Ga0157372_10062835 3300013307 Bacteria 4162
59 Ga0157372_10123505 3300013307 Bacteria 2976
60 Ga0157372_10386389 3300013307 Bacteria 1631
61 Ga0157372_10966549 3300013307 Bacteria 987
62 Ga0157375_10115263 3300013308 Bacteria 2790
63 Ga0157375_10318976 3300013308 Bacteria 1718
64 Ga0157379_10019203 3300014968 Bacteria 6036
65 Ga0157376_10053859 3300014969 Bacteria 3352
66 Ga0206356_11358470 3300020070 Bacteria 1398
67 Ga0206354_10547267 3300020081 Bacteria 795
68 Ga0207692_10018677 3300025898 Bacteria 3117
69 Ga0207692_10089420 3300025898 Bacteria 1666
70 Ga0207647_10061378 3300025904 Bacteria 2295
71 Ga0207699_10018118 3300025906 Bacteria 3726
72 Ga0207652_10312783 3300025921 Bacteria 1418
73 Ga0207694_10342930 3300025924 Bacteria 1236
74 Ga0207694_10456499 3300025924 Bacteria 1067
75 Ga0207687_10060714 3300025927 Bacteria 2667
76 Ga0207700_10534311 3300025928 Bacteria 1040
77 Ga0207664_10013288 3300025929 Bacteria 5905
78 Ga0207706_10294251 3300025933 Bacteria 1415
79 Ga0207709_10405658 3300025935 Bacteria 1043
80 Ga0207711_10062125 3300025941 Bacteria 3222
81 Ga0207711_10558859 3300025941 Bacteria 1067
82 Ga0207677_10274007 3300026023 Bacteria 1382
83 Ga0207703_10010892 3300026035 Bacteria 7090
84 Ga0207641_10776344 3300026088 Bacteria 947
85 Ga0207674_10060588 3300026116 Bacteria 3826
86 Ga0207698_10109543 3300026142 Bacteria 2311
87 Ga0268266_10205318 3300028379 Bacteria 1805
88 Ga0307512_10033447 3300030522 Bacteria 4419
89 Ga0265340_10007708 3300031247 Bacteria 5839
90 Ga0307513_10025107 3300031456 Bacteria 6914
91 Ga0307508_10144460 3300031616 Bacteria 1983
92 Ga0316576_10035999 3300031727 Bacteria 3537
93 Ga0307413_10000108 3300031824 Bacteria 21132
94 Ga0307413_10109637 3300031824 Bacteria 1845
95 Ga0307518_10285147 3300031838 Bacteria 1018
96 Ga0307410_10335017 3300031852 Bacteria 1204
97 Ga0307406_10024222 3300031901 Bacteria 3622
98 Ga0307407_10257875 3300031903 Bacteria 1198
99 Ga0373936_0155084 3300035113 Bacteria 994
100 Ga0373961_0030543 3300035241 Bacteria 1500
101 Ga0372808_004219 3300036459 Bacteria 1819
102 Ga0316584_0016524 3300036712 Bacteria 5290
103 Ga0373925_0059320 3300037068 Bacteria 2870
104 Ga0395898_0007929 3300037466 Bacteria 11265
105 Ga0395898_0133482 3300037466 Bacteria 2377
106 Ga0395901_0151669 3300038443 Bacteria 2435
107 Ga0436365_1555916 3300039437 Bacteria 802
108 Ga0466972_0003631 3300044658 Bacteria 7666
109 Ga0466972_0027992 3300044658 Bacteria 2784
110 Ga0466965_0012173 3300044683 Bacteria 4043
111 Ga0466966_0072052 3300044684 Bacteria 2164
112 Ga0466961_0036049 3300044693 Bacteria 3175
113 Ga0466963_0480059 3300044694 Bacteria 877
114 Ga0466957_0044871 3300044842 Bacteria 2680
115 Ga0466960_0000616 3300044901 Bacteria 12281
116 Ga0466960_0053153 3300044901 Bacteria 1962
117 Ga0466960_0158948 3300044901 Bacteria 1212
118 Ga0466959_0077967 3300045049 Bacteria 2390
119 Ga0466959_0266914 3300045049 Bacteria 1177
120 Ga0466958_0032050 3300045836 Bacteria 3125
121 Ga0466958_0118132 3300045836 Bacteria 1659
122 Ga0466958_0156143 3300045836 Bacteria 1440
123 Ga0466958_0252293 3300045836 Bacteria 1129
124 Ga0466967_0001180 3300045976 Bacteria 14656
125 Ga0466967_0009664 3300045976 Bacteria 7174
126 Ga0466967_0024819 3300045976 Bacteria 4934
127 Ga0466967_0300874 3300045976 Bacteria 1543
128 Ga0466967_0742047 3300045976 Bacteria 973
129 Ga0466967_1110028 3300045976 Bacteria 788
130 Ga0495592_0021638 3300046454 Bacteria 4891
131 Ga0495603_0128310 3300046455 Bacteria 1477
132 Ga0495651_0062970 3300046462 Bacteria 2836
133 Ga0495653_0022194 3300046463 Bacteria 5137
134 Ga0495664_0011636 3300046477 Bacteria 4965
135 Ga0495608_0070356 3300046511 Bacteria 2283
136 Ga0495618_0010125 3300046514 Bacteria 5701
137 Ga0495628_0050122 3300046516 Bacteria 3303
138 Ga0495652_0011057 3300046529 Bacteria 8179
139 Ga0495640_0050051 3300046533 Bacteria 2879
140 Ga0495587_0001687 3300046536 Bacteria 14745
141 Ga0495645_0017453 3300046543 Bacteria 5141
142 Ga0495667_0122674 3300046559 Bacteria 1677
143 Ga0495634_0036702 3300046642 Bacteria 3350
144 Ga0495635_0034563 3300046663 Bacteria 3506
145 Ga0495599_0029948 3300046678 Bacteria 3414
146 Ga0495623_0139223 3300046679 Bacteria 1445
147 Ga0495646_0011039 3300046680 Bacteria 5738
148 Ga0495647_0048131 3300046681 Bacteria 1648
149 Ga0495669_0005292 3300046684 Bacteria 5376
150 Ga0495600_0024952 3300046809 Bacteria 3850
151 Ga0495604_0032039 3300047317 Bacteria 4167
152 Ga0495680_0008997 3300047322 Bacteria 9022
153 Ga0495602_0101675 3300048088 Bacteria 2357
154 Ga0496100_0053293 3300048903 Bacteria 2634
155 Ga0496104_0005728 3300048907 Bacteria 10870
156 Ga0496104_0508272 3300048907 Bacteria 1116
157 Ga0496104_0530249 3300048907 Bacteria 1088
158 Ga0496105_0016226 3300048908 Bacteria 5942
159 Ga0496105_0168298 3300048908 Bacteria 1797
160 Ga0496108_0012214 3300048911 Bacteria 6986
161 Ga0496108_0287565 3300048911 Bacteria 1431
162 Ga0496108_0371423 3300048911 Bacteria 1249
163 Ga0496109_0014397 3300048912 Bacteria 6883
164 Ga0496109_0165933 3300048912 Bacteria 2070
165 Ga0496110_0036184 3300048913 Bacteria 4286
166 Ga0496110_0525458 3300048913 Bacteria 1076
167 Ga0496111_0044838 3300048914 Bacteria 3179
168 Ga0496111_0138779 3300048914 Bacteria 1801
169 Ga0496112_0098668 3300048915 Bacteria 2891
170 Ga0496112_0108206 3300048915 Bacteria 2750
171 Ga0496112_0167538 3300048915 Bacteria 2163
172 Ga0496113_0027954 3300048916 Bacteria 4050
173 Ga0496113_0114923 3300048916 Bacteria 2099
174 Ga0496114_0059336 3300048917 Bacteria 3196
175 Ga0496114_0119229 3300048917 Bacteria 2268
176 Ga0496115_0077625 3300048918 Bacteria 2701
177 Ga0496124_0364102 3300048927 Bacteria 1018
178 Ga0501306_003272 3300049127 Bacteria 1734
179 Ga0501308_019704 3300049128 Bacteria 835
180 Ga0501312_005546 3300049528 Bacteria 1538
181 Ga0501317_010460 3300049533 Bacteria 1109
182 Ga0501318_002628 3300049534 Bacteria 1578
183 Ga0501318_004389 3300049534 Bacteria 1350
184 Ga0501031_0071482 3300049568 Bacteria 2260
185 Ga0501038_0138347 3300049574 Bacteria 1994
186 Ga0501039_0275655 3300049575 Bacteria 1322
187 Ga0501040_0017635 3300049576 Bacteria 4739
188 Ga0501048_0035281 3300049582 Bacteria 3601
189 Ga0501072_0139943 3300049588 Bacteria 1929
190 Ga0501075_0113966 3300049591 Bacteria 2056
191 Ga0501077_0094158 3300049593 Bacteria 1899
192 Ga0501079_0092126 3300049741 Bacteria 2348
193 Ga0501080_0096815 3300049742 Bacteria 2740
194 Ga0501080_0287081 3300049742 Bacteria 1495
195 Ga0501035_0346728 3300049822 Bacteria 1243
196 nmdc:mga0rr50_384201_c1 3300050513 Bacteria 1184
197 Ga0495601_0028756 3300053077 Bacteria 3444
198 Ga0495595_0092460 3300053084 Bacteria 1452
199 Ga0500651_0065063 3300053093 Bacteria 2273
200 Ga0500641_0031380 3300053096 Bacteria 2095
201 Ga0501084_0092035 3300054114 Bacteria 2546
202 Ga0587107_003550 3300059652 Bacteria 1520
203 Ga0501082_0088039 3300060353 Bacteria 2679
204 Ga0466962_0054667 3300061719 Bacteria 1908
205 Ga0466962_0193155 3300061719 Bacteria 993
206 Ga0530510_0179224 3300061734 Bacteria 1571
207 2501939969 2501939600 Bacteria 6907073
208 2515850584 2515154155 Bacteria 7985436
209 2643849790 2643221567 Bacteria 4163945
210 2644135792 2643221624 Bacteria 4384879
211 2676485185 2675903059 Bacteria 8644972
212 2731905510 2731639228 Bacteria 4187555
213 2753268157 2751185782 Bacteria 11227053
214 2855688664 2855683550 Bacteria 7134265
215 2856864313 2856858025 Bacteria 7255264
216 649814159 649633069 Bacteria 6962533
217 8054473995 8054472261 Bacteria 7464355
218 Ga0501305_011146
219 LJQas_1009752
220 Ga0006778J45830_1006628
221 Ga0006759J45824_1032779
222 JGI25406J46586_10022818
223 Ga0006781J51513_1008498
224 Ga0007410J51695_1019033
225 Ga0007416J51690_1049926
226 Ga0007429J51699_1010708
227 Ga0032354_1041617
228 Ga0006780_1003772
229 Ga0058861_11984128
230 Ga0058862_10091935
231 Ga0070683_100137918
232 Ga0070682_100141514
233 Ga0068868_100218985
234 Ga0070691_10019005
235 Ga0070659_100399736
236 Ga0070709_10153024
237 Ga0070714_100003855
238 Ga0070713_100076156
239 Ga0070708_100071032
240 Ga0070681_10470281
241 Ga0070706_100419508
242 Ga0070707_100573639
243 Ga0070698_100459952
244 Ga0070699_100166697
245 Ga0070684_100187877
246 Ga0070684_100602495
247 Ga0070697_100380928
248 Ga0070665_100193799
249 Ga0070665_100207868
250 Ga0068852_100477431
251 Ga0068852_100518098
252 Ga0068858_100060015
253 Ga0068860_100106110
254 Ga0081455_10072855
255 Ga0081540_1006583
256 Ga0081539_10004729
257 Ga0081539_10035617
258 Ga0070717_10405246
259 Ga0070716_100227305
260 Ga0097621_100082779
261 Ga0068871_100044512
262 Ga0105245_10025570
263 Ga0105245_10358612
264 Ga0105247_10186512
265 Ga0105242_10136639
266 Ga0105248_10083851
267 Ga0105248_10337561
268 Ga0105248_10761826
269 Ga0105238_10704437
270 Ga0105238_10799005
271 Ga0157369_10028010
272 Ga0157374_10035097
273 Ga0163162_10272863
274 Ga0157372_10028842
275 Ga0157372_10062835
276 Ga0157372_10123505
277 Ga0157372_10386389
278 Ga0157372_10966549
279 Ga0157375_10115263
280 Ga0157375_10318976
281 Ga0157379_10019203
282 Ga0157376_10053859
283 Ga0206356_11358470
284 Ga0206354_10547267
285 Ga0207692_10018677
286 Ga0207692_10089420
287 Ga0207647_10061378
288 Ga0207699_10018118
289 Ga0207652_10312783
290 Ga0207694_10342930
291 Ga0207694_10456499
292 Ga0207687_10060714
293 Ga0207700_10534311
294 Ga0207664_10013288
295 Ga0207706_10294251
296 Ga0207709_10405658
297 Ga0207711_10062125
298 Ga0207711_10558859
299 Ga0207677_10274007
300 Ga0207703_10010892
301 Ga0207641_10776344
302 Ga0207674_10060588
303 Ga0207698_10109543
304 Ga0268266_10205318
305 Ga0307512_10033447
306 Ga0265340_10007708
307 Ga0307513_10025107
308 Ga0307508_10144460
309 Ga0316576_10035999
310 Ga0307413_10000108
311 Ga0307413_10109637
312 Ga0307518_10285147
313 Ga0307410_10335017
314 Ga0307406_10024222
315 Ga0307407_10257875
316 Ga0373936_0155084
317 Ga0373961_0030543
318 Ga0372808_004219
319 Ga0316584_0016524
320 Ga0373925_0059320
321 Ga0395898_0007929
322 Ga0395898_0133482
323 Ga0395901_0151669
324 Ga0436365_1555916
325 Ga0466972_0003631
326 Ga0466972_0027992
327 Ga0466965_0012173
328 Ga0466966_0072052
329 Ga0466961_0036049
330 Ga0466963_0480059
331 Ga0466957_0044871
332 Ga0466960_0000616
333 Ga0466960_0053153
334 Ga0466960_0158948
335 Ga0466959_0077967
336 Ga0466959_0266914
337 Ga0466958_0032050
338 Ga0466958_0118132
339 Ga0466958_0156143
340 Ga0466958_0252293
341 Ga0466967_0001180
342 Ga0466967_0009664
343 Ga0466967_0024819
344 Ga0466967_0300874
345 Ga0466967_0742047
346 Ga0466967_1110028
347 Ga0495592_0021638
348 Ga0495603_0128310
349 Ga0495651_0062970
350 Ga0495653_0022194
351 Ga0495664_0011636
352 Ga0495608_0070356
353 Ga0495618_0010125
354 Ga0495628_0050122
355 Ga0495652_0011057
356 Ga0495640_0050051
357 Ga0495587_0001687
358 Ga0495645_0017453
359 Ga0495667_0122674
360 Ga0495634_0036702
361 Ga0495635_0034563
362 Ga0495599_0029948
363 Ga0495623_0139223
364 Ga0495646_0011039
365 Ga0495647_0048131
366 Ga0495669_0005292
367 Ga0495600_0024952
368 Ga0495604_0032039
369 Ga0495680_0008997
370 Ga0495602_0101675
371 Ga0496100_0053293
372 Ga0496104_0005728
373 Ga0496104_0508272
374 Ga0496104_0530249
375 Ga0496105_0016226
376 Ga0496105_0168298
377 Ga0496108_0012214
378 Ga0496108_0287565
379 Ga0496108_0371423
380 Ga0496109_0014397
381 Ga0496109_0165933
382 Ga0496110_0036184
383 Ga0496110_0525458
384 Ga0496111_0044838
385 Ga0496111_0138779
386 Ga0496112_0098668
387 Ga0496112_0108206
388 Ga0496112_0167538
389 Ga0496113_0027954
390 Ga0496113_0114923
391 Ga0496114_0059336
392 Ga0496114_0119229
393 Ga0496115_0077625
394 Ga0496124_0364102
395 Ga0501306_003272
396 Ga0501308_019704
397 Ga0501312_005546
398 Ga0501317_010460
399 Ga0501318_002628
400 Ga0501318_004389
401 Ga0501031_0071482
402 Ga0501038_0138347
403 Ga0501039_0275655
404 Ga0501040_0017635
405 Ga0501048_0035281
406 Ga0501072_0139943
407 Ga0501075_0113966
408 Ga0501077_0094158
409 Ga0501079_0092126
410 Ga0501080_0096815
411 Ga0501080_0287081
412 Ga0501035_0346728
413 nmdc:mga0rr50_384201_c1
414 Ga0495601_0028756
415 Ga0495595_0092460
416 Ga0500651_0065063
417 Ga0500641_0031380
418 Ga0501084_0092035
419 Ga0587107_003550
420 Ga0501082_0088039
421 Ga0466962_0054667
422 Ga0466962_0193155
423 Ga0530510_0179224
424 2501939969
425 2515850584
426 2643849790
427 2644135792
428 2676485185
429 2731905510
430 2753268157
431 2855688664
432 2856864313
433 649814159
434 8054473995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

23

176

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5awf-assembly1.cif.gz_D crystal structure of sufb-sufc-sufd complex from escherichia coli 0.9129 25 257
2zu0-assembly1.cif.gz_C crystal structure of sufc-sufd complex involved in the iron-sulfur cluster biosynthesis 0.9082 25 269
5awf-assembly1.cif.gz_D crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8834 25 257
2zu0-assembly1.cif.gz_C crystal structure of sufc-sufd complex involved in the iron-sulfur cluster biosynthesis 0.8803 25 269
2d2f-assembly1.cif.gz_A crystal structure of atypical cytoplasmic abc-atpase sufc from thermus thermophilus hb8 0.8715 24 275
ID Description Score Start End Superfamily
af_Q2FZY7_2_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9201 23 275 3.40.50.300
af_Q2FZY7_2_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8991 23 275 3.40.50.300
af_Q8ILW0_99_346_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8657 25 273 3.40.50.300
af_P16676_2_258_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8572 25 259 3.40.50.300
af_Q8ILW0_99_346_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8561 25 273 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A351MIF7-F1-model_v4 Fe-S cluster assembly ATPase SufC 0.936 22 273 GO:0005524
GO:0016887
AF-A0A1V5UVN0-F1-model_v4 Vegetative protein 296 0.9353 24 269 GO:0005524
GO:0016887
AF-A0A7K0T023-F1-model_v4 Fe-S cluster assembly ATPase SufC 0.9337 97 274 GO:0005524
GO:0016887
AF-A0A2G6KEK6-F1-model_v4 Fe-S cluster assembly ATPase SufC 0.9301 23 273 GO:0005524
GO:0016887
AF-A0A2C6WM49-F1-model_v4 Fe-S cluster assembly ATPase SufC 0.9298 22 274 GO:0005524
GO:0016887

Map