F328074

General Info

Members Datasets Scaffolds Average Seq Length
216 154 432 348

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0340527|Ga0501047_0340527_70_1281
Length 403
Sequence MLADLTAQNFFAPREALSCDLARDRLKWGTLRSPKPWFSPAFGESHGILIETMIAPANSTAATDSTPANQGWKHIVARYQKPSVARATWQILNTIVPYLGLWCLMWLSLRVSWWLTIPLAVLAGGFLVRTFIIFHDCGHGSFFKSQTANHILGAITGVLTFTPYYHWRWEHAIHHSSAGDLDRRGTGDVWTLTVQEYLEASRWKRFAYRLARNPLVLFVLAPLGLFLVKQRVPSLKAPARERYSVYWTNLGLGAVAAGLIWLFGLKAYLILQLTVLLVAGSTGVWLFYVQHQFEGVYWERGENWDYAQAALQGSSFYKLPKVLQWFSGNIGYHHIHHLSPRIPNYHLEKCHQAEPLFQTVKPVTFFASFKSFTFRLWDEQRRRLVGYGHLRKVRKQQRSTAQS

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
62 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
66 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
71 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
72 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
73 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
74 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
85 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.61
Metatranscriptomes 1.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.24
Rhizosphere 89.81
Stem 0
Stem Tuber 0
Unclassified 8.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0340527 3300049581 Bacteria 1337
2 rootL2_10081456 3300003322 Bacteria 1987
3 Ga0007409J51694_1081608 3300003575 Bacteria 1220
4 Ga0058860_12007536 3300004801 Bacteria 2036
5 Ga0070683_100039297 3300005329 Bacteria 4343
6 Ga0070683_100351320 3300005329 Bacteria 1404
7 Ga0070690_100008547 3300005330 Bacteria 5903
8 Ga0070690_100024061 3300005330 Unclassified 3743
9 Ga0070666_10005320 3300005335 Bacteria 7888
10 Ga0070689_100011942 3300005340 Bacteria 6238
11 Ga0070689_100200309 3300005340 Bacteria 1630
12 Ga0070688_100152238 3300005365 Bacteria 1582
13 Ga0070667_100005208 3300005367 Bacteria 10867
14 Ga0070714_100010322 3300005435 Bacteria 7380
15 Ga0070701_10006818 3300005438 Unclassified 4832
16 Ga0070705_100225720 3300005440 Unclassified 1300
17 Ga0070708_100068677 3300005445 Bacteria 3186
18 Ga0070663_100000351 3300005455 Bacteria 24141
19 Ga0070679_100000621 3300005530 Bacteria 30165
20 Ga0070679_100107613 3300005530 Bacteria 2774
21 Ga0068853_100102447 3300005539 Bacteria 2533
22 Ga0070686_100061269 3300005544 Bacteria 2431
23 Ga0070686_100109166 3300005544 Bacteria 1882
24 Ga0070665_100056925 3300005548 Bacteria 3920
25 Ga0070704_100118397 3300005549 Bacteria 2029
26 Ga0068855_100031486 3300005563 Bacteria 6333
27 Ga0068856_100168690 3300005614 Unclassified 2200
28 Ga0068859_100003072 3300005617 Bacteria 16926
29 Ga0068859_100332235 3300005617 Bacteria 1614
30 Ga0068859_100426701 3300005617 Bacteria 1422
31 Ga0068861_100029771 3300005719 Bacteria 3996
32 Ga0068863_100011882 3300005841 Bacteria 8415
33 Ga0081455_10195714 3300005937 Bacteria 1518
34 Ga0075431_100395901 3300006847 Bacteria 1383
35 Ga0097620_100003072 3300006931 Bacteria 16926
36 Ga0097620_100332254 3300006931 Bacteria 1614
37 Ga0097620_100426656 3300006931 Bacteria 1422
38 Ga0105240_10149872 3300009093 Bacteria 2779
39 Ga0111539_10011504 3300009094 Bacteria 11104
40 Ga0111539_10116193 3300009094 Bacteria 3137
41 Ga0114129_10038540 3300009147 Bacteria 6741
42 Ga0114129_10156587 3300009147 Bacteria 3115
43 Ga0114129_10346281 3300009147 Bacteria 1970
44 Ga0105243_10291135 3300009148 Unclassified 1475
45 Ga0105237_10075089 3300009545 Bacteria 3372
46 Ga0105238_10041269 3300009551 Bacteria 4674
47 Ga0105238_10180738 3300009551 Unclassified 2086
48 Ga0105239_10215736 3300010375 Bacteria 2151
49 Ga0105246_10022889 3300011119 Bacteria 4038
50 Ga0157370_10161241 3300013104 Unclassified 2086
51 Ga0157378_10150746 3300013297 Bacteria 2166
52 Ga0157378_10308896 3300013297 Unclassified 1533
53 Ga0157378_10534498 3300013297 Bacteria 1176
54 Ga0163162_10421064 3300013306 Bacteria 1468
55 Ga0163163_10519072 3300014325 Bacteria 1253
56 Ga0224712_10125298 3300022467 Bacteria 1116
57 Ga0207707_10172593 3300025912 Unclassified 1889
58 Ga0207695_10330408 3300025913 Bacteria 1413
59 Ga0207671_10313994 3300025914 Bacteria 1239
60 Ga0207652_10000523 3300025921 Bacteria 38967
61 Ga0207694_10012012 3300025924 Bacteria 6528
62 Ga0207694_10083819 3300025924 Bacteria 2507
63 Ga0207687_10285071 3300025927 Bacteria 1325
64 Ga0207664_10008342 3300025929 Bacteria 7222
65 Ga0207709_10268742 3300025935 Bacteria 1254
66 Ga0207661_10009096 3300025944 Bacteria 7119
67 Ga0207667_10030867 3300025949 Bacteria 5791
68 Ga0207639_10058054 3300026041 Bacteria 2975
69 Ga0207678_10000445 3300026067 Bacteria 37602
70 Ga0207708_10166806 3300026075 Bacteria 1741
71 Ga0207702_10110294 3300026078 Unclassified 2445
72 Ga0207641_10014161 3300026088 Bacteria 6537
73 Ga0207674_10014499 3300026116 Bacteria 8704
74 Ga0207674_10347419 3300026116 Bacteria 1434
75 Ga0207675_100053485 3300026118 Bacteria 3767
76 Ga0207675_100156702 3300026118 Bacteria 2170
77 Ga0268266_10003282 3300028379 Bacteria 16272
78 Ga0265337_1000187 3300028556 Bacteria 32847
79 Ga0265337_1010243 3300028556 Bacteria 3296
80 Ga0265326_10000433 3300028558 Bacteria 16552
81 Ga0265319_1000472 3300028563 Bacteria 28452
82 Ga0265319_1005394 3300028563 Bacteria 6122
83 Ga0265334_10002719 3300028573 Bacteria 8173
84 Ga0265334_10027776 3300028573 Bacteria 2277
85 Ga0265318_10001687 3300028577 Bacteria 12689
86 Ga0265318_10013328 3300028577 Unclassified 3478
87 Ga0265318_10021083 3300028577 Bacteria 2621
88 Ga0265322_10000893 3300028654 Bacteria 10578
89 Ga0265336_10001005 3300028666 Bacteria 13858
90 Ga0265338_10000610 3300028800 Bacteria 62626
91 Ga0265338_10001678 3300028800 Bacteria 35193
92 Ga0265338_10002866 3300028800 Bacteria 25184
93 Ga0265338_10005721 3300028800 Bacteria 16076
94 Ga0265338_10005732 3300028800 Bacteria 16060
95 Ga0265338_10021176 3300028800 Bacteria 6793
96 Ga0265338_10028171 3300028800 Bacteria 5610
97 Ga0265338_10096095 3300028800 Bacteria 2432
98 Ga0265338_10128638 3300028800 Bacteria 2005
99 Ga0265338_10150740 3300028800 Bacteria 1807
100 Ga0265324_10005432 3300029957 Bacteria 5506
101 Ga0265324_10017934 3300029957 Unclassified 2570
102 Ga0265330_10017014 3300031235 Unclassified 3352
103 Ga0265332_10001655 3300031238 Bacteria 12171
104 Ga0265328_10001851 3300031239 Bacteria 9620
105 Ga0265320_10003004 3300031240 Bacteria 11507
106 Ga0265320_10030191 3300031240 Unclassified 2798
107 Ga0265325_10051004 3300031241 Unclassified 2128
108 Ga0265329_10002341 3300031242 Bacteria 8663
109 Ga0265340_10002450 3300031247 Bacteria 10559
110 Ga0265340_10003707 3300031247 Bacteria 8606
111 Ga0265339_10006452 3300031249 Bacteria 7692
112 Ga0265331_10006649 3300031250 Bacteria 6794
113 Ga0265331_10022665 3300031250 Unclassified 3202
114 Ga0265327_10015804 3300031251 Bacteria 4844
115 Ga0265327_10019901 3300031251 Unclassified 4110
116 Ga0265316_10003679 3300031344 Bacteria 15450
117 Ga0265316_10024983 3300031344 Bacteria 4993
118 Ga0265316_10229216 3300031344 Bacteria 1368
119 Ga0265313_10000454 3300031595 Bacteria 43333
120 Ga0265314_10008358 3300031711 Bacteria 8874
121 Ga0265342_10000632 3300031712 Bacteria 36862
122 Ga0265342_10001342 3300031712 Bacteria 23076
123 Ga0307413_10140769 3300031824 Bacteria 1667
124 Ga0373953_0022544 3300035117 Bacteria 2375
125 Ga0373956_0010485 3300035119 Bacteria 3799
126 Ga0373955_0008437 3300035172 Bacteria 4786
127 Ga0373937_0000192 3300036401 Bacteria 60004
128 Ga0451798_0947659 3300041458 Bacteria 1724
129 Ga0453683_0272017 3300044673 Bacteria 1081
130 Ga0466963_0041558 3300044694 Bacteria 3016
131 Ga0453684_0121459 3300044712 Bacteria 3153
132 Ga0451576_0003211 3300045051 Bacteria 22791
133 Ga0495592_0000363 3300046454 Bacteria 35909
134 Ga0495662_0011227 3300046476 Bacteria 4379
135 Ga0495618_0040068 3300046514 Bacteria 2947
136 Ga0495628_0000977 3300046516 Bacteria 26152
137 Ga0495630_0000664 3300046517 Bacteria 24831
138 Ga0495630_0010242 3300046517 Bacteria 6764
139 Ga0495643_0000176 3300046522 Bacteria 102034
140 Ga0495640_0017602 3300046533 Bacteria 5321
141 Ga0495586_0000787 3300046535 Bacteria 18235
142 Ga0495645_0026891 3300046543 Bacteria 4179
143 Ga0495667_0032626 3300046559 Bacteria 3489
144 Ga0495635_0082993 3300046663 Bacteria 2193
145 Ga0495600_0096062 3300046809 Bacteria 1932
146 Ga0495581_0077475 3300047315 Bacteria 1924
147 Ga0495604_0027073 3300047317 Bacteria 4562
148 Ga0495674_0043512 3300047319 Bacteria 3997
149 Ga0495676_0089051 3300047321 Bacteria 2313
150 Ga0495593_0027323 3300047673 Bacteria 3142
151 Ga0495602_0373137 3300048088 Bacteria 1024
152 Ga0496103_0062279 3300048906 Bacteria 2322
153 Ga0496104_0014110 3300048907 Bacteria 7211
154 Ga0496105_0000848 3300048908 Bacteria 20845
155 Ga0496109_0266236 3300048912 Bacteria 1615
156 Ga0496115_0052826 3300048918 Unclassified 3260
157 Ga0496115_0274456 3300048918 Bacteria 1385
158 Ga0496116_0000447 3300048919 Bacteria 57650
159 Ga0496118_0092434 3300048921 Bacteria 2076
160 Ga0496119_0000432 3300048922 Bacteria 57656
161 Ga0496119_0049420 3300048922 Bacteria 2600
162 Ga0496120_0006892 3300048923 Bacteria 8577
163 Ga0496121_0034378 3300048924 Bacteria 4563
164 Ga0496121_0224410 3300048924 Bacteria 1321
165 Ga0496124_0046401 3300048927 Bacteria 3720
166 Ga0496125_0109606 3300048928 Bacteria 2004
167 Ga0496126_0007242 3300048929 Bacteria 12198
168 Ga0496126_0012847 3300048929 Bacteria 8558
169 Ga0496126_0021618 3300048929 Bacteria 6282
170 Ga0496126_0131470 3300048929 Bacteria 2162
171 Ga0501031_0002864 3300049568 Bacteria 11022
172 Ga0501032_0014838 3300049569 Bacteria 5513
173 Ga0501033_0002182 3300049570 Bacteria 16893
174 Ga0501034_0124471 3300049571 Bacteria 2563
175 Ga0501034_0155090 3300049571 Bacteria 2264
176 Ga0501036_0018786 3300049572 Bacteria 5796
177 Ga0501037_0016973 3300049573 Bacteria 5356
178 Ga0501038_0024100 3300049574 Bacteria 5431
179 Ga0501039_0017800 3300049575 Bacteria 5450
180 Ga0501040_0094501 3300049576 Bacteria 2080
181 Ga0501043_0018570 3300049579 Bacteria 5455
182 Ga0501046_0020449 3300049580 Bacteria 5472
183 Ga0501047_0002662 3300049581 Bacteria 16994
184 Ga0501047_0128842 3300049581 Bacteria 2411
185 Ga0501048_0016713 3300049582 Bacteria 5408
186 Ga0501068_0181578 3300049584 Bacteria 1330
187 Ga0501069_0045113 3300049585 Bacteria 2441
188 Ga0501070_0002268 3300049586 Bacteria 16901
189 Ga0501070_0054731 3300049586 Bacteria 3308
190 Ga0501072_0083203 3300049588 Bacteria 2537
191 Ga0501073_0016850 3300049589 Bacteria 5292
192 Ga0501079_0017791 3300049741 Bacteria 5431
193 Ga0501079_0159687 3300049741 Bacteria 1757
194 Ga0501080_0048597 3300049742 Bacteria 3948
195 Ga0501080_0109832 3300049742 Bacteria 2556
196 Ga0501083_0157835 3300049744 Bacteria 1484
197 Ga0501035_0002777 3300049822 Bacteria 16952
198 Ga0501044_0008859 3300049823 Bacteria 11000
199 Ga0501044_0126608 3300049823 Bacteria 2551
200 Ga0501044_0192227 3300049823 Bacteria 2003
201 Ga0501045_0051511 3300049824 Bacteria 3004
202 nmdc:mga05p37_69815_c1 3300050507 Bacteria 4322
203 nmdc:mga09592_172088_c1 3300050508 Bacteria 1872
204 nmdc:mga09592_227659_c1 3300050508 Bacteria 1615
205 nmdc:mga09592_9316_c1 3300050508 Bacteria 7985
206 nmdc:mga0qj67_5677_c1 3300050509 Bacteria 9125
207 nmdc:mga06r32_109816_c1 3300050510 Bacteria 2713
208 nmdc:mga06r32_396851_c1 3300050510 Bacteria 1361
209 nmdc:mga08y16_166957_c1 3300050511 Bacteria 2286
210 nmdc:mga08y16_18420_c1 3300050511 Bacteria 7359
211 nmdc:mga08y16_64298_c1 3300050511 Bacteria 3831
212 Ga0495601_0017659 3300053077 Bacteria 4333
213 Ga0495601_0104270 3300053077 Bacteria 1833
214 Ga0495612_0000132 3300053078 Bacteria 31605
215 Ga0495612_0077027 3300053078 Bacteria 1397
216 Ga0495619_0009345 3300053085 Bacteria 6188
217 Ga0501047_0340527
218 rootL2_10081456
219 Ga0007409J51694_1081608
220 Ga0058860_12007536
221 Ga0070683_100039297
222 Ga0070683_100351320
223 Ga0070690_100008547
224 Ga0070690_100024061
225 Ga0070666_10005320
226 Ga0070689_100011942
227 Ga0070689_100200309
228 Ga0070688_100152238
229 Ga0070667_100005208
230 Ga0070714_100010322
231 Ga0070701_10006818
232 Ga0070705_100225720
233 Ga0070708_100068677
234 Ga0070663_100000351
235 Ga0070679_100000621
236 Ga0070679_100107613
237 Ga0068853_100102447
238 Ga0070686_100061269
239 Ga0070686_100109166
240 Ga0070665_100056925
241 Ga0070704_100118397
242 Ga0068855_100031486
243 Ga0068856_100168690
244 Ga0068859_100003072
245 Ga0068859_100332235
246 Ga0068859_100426701
247 Ga0068861_100029771
248 Ga0068863_100011882
249 Ga0081455_10195714
250 Ga0075431_100395901
251 Ga0097620_100003072
252 Ga0097620_100332254
253 Ga0097620_100426656
254 Ga0105240_10149872
255 Ga0111539_10011504
256 Ga0111539_10116193
257 Ga0114129_10038540
258 Ga0114129_10156587
259 Ga0114129_10346281
260 Ga0105243_10291135
261 Ga0105237_10075089
262 Ga0105238_10041269
263 Ga0105238_10180738
264 Ga0105239_10215736
265 Ga0105246_10022889
266 Ga0157370_10161241
267 Ga0157378_10150746
268 Ga0157378_10308896
269 Ga0157378_10534498
270 Ga0163162_10421064
271 Ga0163163_10519072
272 Ga0224712_10125298
273 Ga0207707_10172593
274 Ga0207695_10330408
275 Ga0207671_10313994
276 Ga0207652_10000523
277 Ga0207694_10012012
278 Ga0207694_10083819
279 Ga0207687_10285071
280 Ga0207664_10008342
281 Ga0207709_10268742
282 Ga0207661_10009096
283 Ga0207667_10030867
284 Ga0207639_10058054
285 Ga0207678_10000445
286 Ga0207708_10166806
287 Ga0207702_10110294
288 Ga0207641_10014161
289 Ga0207674_10014499
290 Ga0207674_10347419
291 Ga0207675_100053485
292 Ga0207675_100156702
293 Ga0268266_10003282
294 Ga0265337_1000187
295 Ga0265337_1010243
296 Ga0265326_10000433
297 Ga0265319_1000472
298 Ga0265319_1005394
299 Ga0265334_10002719
300 Ga0265334_10027776
301 Ga0265318_10001687
302 Ga0265318_10013328
303 Ga0265318_10021083
304 Ga0265322_10000893
305 Ga0265336_10001005
306 Ga0265338_10000610
307 Ga0265338_10001678
308 Ga0265338_10002866
309 Ga0265338_10005721
310 Ga0265338_10005732
311 Ga0265338_10021176
312 Ga0265338_10028171
313 Ga0265338_10096095
314 Ga0265338_10128638
315 Ga0265338_10150740
316 Ga0265324_10005432
317 Ga0265324_10017934
318 Ga0265330_10017014
319 Ga0265332_10001655
320 Ga0265328_10001851
321 Ga0265320_10003004
322 Ga0265320_10030191
323 Ga0265325_10051004
324 Ga0265329_10002341
325 Ga0265340_10002450
326 Ga0265340_10003707
327 Ga0265339_10006452
328 Ga0265331_10006649
329 Ga0265331_10022665
330 Ga0265327_10015804
331 Ga0265327_10019901
332 Ga0265316_10003679
333 Ga0265316_10024983
334 Ga0265316_10229216
335 Ga0265313_10000454
336 Ga0265314_10008358
337 Ga0265342_10000632
338 Ga0265342_10001342
339 Ga0307413_10140769
340 Ga0373953_0022544
341 Ga0373956_0010485
342 Ga0373955_0008437
343 Ga0373937_0000192
344 Ga0451798_0947659
345 Ga0453683_0272017
346 Ga0466963_0041558
347 Ga0453684_0121459
348 Ga0451576_0003211
349 Ga0495592_0000363
350 Ga0495662_0011227
351 Ga0495618_0040068
352 Ga0495628_0000977
353 Ga0495630_0000664
354 Ga0495630_0010242
355 Ga0495643_0000176
356 Ga0495640_0017602
357 Ga0495586_0000787
358 Ga0495645_0026891
359 Ga0495667_0032626
360 Ga0495635_0082993
361 Ga0495600_0096062
362 Ga0495581_0077475
363 Ga0495604_0027073
364 Ga0495674_0043512
365 Ga0495676_0089051
366 Ga0495593_0027323
367 Ga0495602_0373137
368 Ga0496103_0062279
369 Ga0496104_0014110
370 Ga0496105_0000848
371 Ga0496109_0266236
372 Ga0496115_0052826
373 Ga0496115_0274456
374 Ga0496116_0000447
375 Ga0496118_0092434
376 Ga0496119_0000432
377 Ga0496119_0049420
378 Ga0496120_0006892
379 Ga0496121_0034378
380 Ga0496121_0224410
381 Ga0496124_0046401
382 Ga0496125_0109606
383 Ga0496126_0007242
384 Ga0496126_0012847
385 Ga0496126_0021618
386 Ga0496126_0131470
387 Ga0501031_0002864
388 Ga0501032_0014838
389 Ga0501033_0002182
390 Ga0501034_0124471
391 Ga0501034_0155090
392 Ga0501036_0018786
393 Ga0501037_0016973
394 Ga0501038_0024100
395 Ga0501039_0017800
396 Ga0501040_0094501
397 Ga0501043_0018570
398 Ga0501046_0020449
399 Ga0501047_0002662
400 Ga0501047_0128842
401 Ga0501048_0016713
402 Ga0501068_0181578
403 Ga0501069_0045113
404 Ga0501070_0002268
405 Ga0501070_0054731
406 Ga0501072_0083203
407 Ga0501073_0016850
408 Ga0501079_0017791
409 Ga0501079_0159687
410 Ga0501080_0048597
411 Ga0501080_0109832
412 Ga0501083_0157835
413 Ga0501035_0002777
414 Ga0501044_0008859
415 Ga0501044_0126608
416 Ga0501044_0192227
417 Ga0501045_0051511
418 nmdc:mga05p37_69815_c1
419 nmdc:mga09592_172088_c1
420 nmdc:mga09592_227659_c1
421 nmdc:mga09592_9316_c1
422 nmdc:mga0qj67_5677_c1
423 nmdc:mga06r32_109816_c1
424 nmdc:mga06r32_396851_c1
425 nmdc:mga08y16_166957_c1
426 nmdc:mga08y16_18420_c1
427 nmdc:mga08y16_64298_c1
428 Ga0495601_0017659
429 Ga0495601_0104270
430 Ga0495612_0000132
431 Ga0495612_0077027
432 Ga0495619_0009345

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00487

FA_desaturase

Fatty acid desaturase

112

366

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7zg0-assembly1.cif.gz_B murine il-27 in complex with il-27ra and a non-competing nb 0.3192 99 229
1jv6-assembly1.cif.gz_A bacteriorhodopsin d85s/f219l double mutant at 2.00 angstrom resolution 0.2784 19 229
7zg0-assembly1.cif.gz_A murine il-27 in complex with il-27ra and a non-competing nb 0.2759 69 229
7zg0-assembly1.cif.gz_B murine il-27 in complex with il-27ra and a non-competing nb 0.2722 99 229
7zg0-assembly1.cif.gz_A murine il-27 in complex with il-27ra and a non-competing nb 0.259 69 229
ID Description Score Start End Superfamily
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.6676 59 299 3.30.40.10
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.6042 59 299 3.30.40.10
af_Q07652_1419_1542_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.4439 139 214 1.20.120.350
af_A2BHF4_1432_1552_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.4126 139 214 1.20.120.350
af_E7EYT5_13_186_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3359 65 216 1.20.58.70
ID Description Score Start End GO Terms
AF-A9U7U8-F1-model_v4 Predicted protein 0.9695 24 123 GO:0006629
GO:0016020
GO:0016491
AF-A0A1G9HC53-F1-model_v4 Omega-6 fatty acid desaturase (Delta-12 desaturase) 0.9516 12 225 GO:0006629
GO:0016020
GO:0016717
AF-A0A6I4UI65-F1-model_v4 Fatty acid desaturase 0.9247 17 250 GO:0006633
GO:0016020
GO:0016717
AF-A9U7U8-F1-model_v4 Predicted protein 0.9158 24 123 GO:0006629
GO:0016020
GO:0016491
AF-A0A7V9RJ28-F1-model_v4 Fatty acid desaturase 0.9131 17 268 GO:0006629
GO:0016020
GO:0016717

Map