F328065

General Info

Members Datasets Scaffolds Average Seq Length
216 137 432 227

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0038499|Ga0501040_0038499_854_1618
Length 254
Sequence MKDWTSSVDDSPSLTELERRVTGCRRCPRLVVWREQVAREKVRRFAADDYWGRPVPSFGDPHARLLIVGLAPAAHGGNRTGRVFTGDRSGDWLYRALYKAGFANQPASIDRNDGLTLTDCYITAVIHCAPPENKPLPGEVLNCRPYLLREVELMNRAMVVIALGRIAFDAVIASVGLPAKEDPRGRRAARPKFSHAAEYELRGGIRLIASFHPSQQNTFTGKLTEPMFDRVFSRARAILGQSSEACANASPRRI

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
62 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
63 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
64 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
65 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
75 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
76 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
77 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
137 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0
Isolates 0.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.46
Rhizosphere 97.69
Stem 0
Stem Tuber 0
Unclassified 9.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0038499 3300049576 Unclassified 3251
2 JGI25407J50210_10000118 3300003373 Bacteria 11408
3 JGI25407J50210_10006026 3300003373 Bacteria 3004
4 Ga0068868_100081144 3300005338 Bacteria 2600
5 Ga0070714_100089625 3300005435 Bacteria 2693
6 Ga0070714_100098495 3300005435 Bacteria 2572
7 Ga0070710_10133588 3300005437 Bacteria 1515
8 Ga0070700_100390693 3300005441 Bacteria 1043
9 Ga0070694_100497499 3300005444 Bacteria 970
10 Ga0070708_100037550 3300005445 Bacteria 4227
11 Ga0070708_100653208 3300005445 Bacteria 991
12 Ga0070706_100022554 3300005467 Bacteria 5796
13 Ga0070706_100030576 3300005467 Bacteria 4963
14 Ga0070706_100813134 3300005467 Bacteria 865
15 Ga0070707_100027376 3300005468 Bacteria 5424
16 Ga0070698_100002116 3300005471 Bacteria 22068
17 Ga0070695_100375981 3300005545 Bacteria 1071
18 Ga0070696_100113324 3300005546 Bacteria 1955
19 Ga0070704_100826160 3300005549 Unclassified 829
20 Ga0068854_100223592 3300005578 Bacteria 1490
21 Ga0068856_100087671 3300005614 Unclassified 3094
22 Ga0070702_100240863 3300005615 Bacteria 1221
23 Ga0068859_100512415 3300005617 Bacteria 1295
24 Ga0081455_10018737 3300005937 Bacteria 6571
25 Ga0081455_10118493 3300005937 Bacteria 2090
26 Ga0081538_10000070 3300005981 Bacteria 96971
27 Ga0081538_10001558 3300005981 Bacteria 23495
28 Ga0081538_10139574 3300005981 Bacteria 1121
29 Ga0081539_10013143 3300005985 Bacteria 6274
30 Ga0081539_10034839 3300005985 Bacteria 3036
31 Ga0081539_10045778 3300005985 Bacteria 2513
32 Ga0070717_10030188 3300006028 Bacteria 4354
33 Ga0075433_10057781 3300006852 Bacteria 3392
34 Ga0075434_100094860 3300006871 Bacteria 2989
35 Ga0075429_100005575 3300006880 Bacteria 10847
36 Ga0075429_100006075 3300006880 Bacteria 10444
37 Ga0075436_100015039 3300006914 Bacteria 5303
38 Ga0097620_100512414 3300006931 Bacteria 1295
39 Ga0111539_10029856 3300009094 Bacteria 6633
40 Ga0105245_10368964 3300009098 Bacteria 1427
41 Ga0114129_10016948 3300009147 Bacteria 10372
42 Ga0114129_10051899 3300009147 Bacteria 5756
43 Ga0114129_10168088 3300009147 Bacteria 2991
44 Ga0114129_10563514 3300009147 Bacteria 1480
45 Ga0105241_10705460 3300009174 Bacteria 921
46 Ga0105242_10253363 3300009176 Bacteria 1587
47 Ga0105239_10091337 3300010375 Bacteria 3360
48 Ga0157378_11106258 3300013297 Bacteria 829
49 Ga0157380_10192154 3300014326 Bacteria 1803
50 Ga0157376_11121554 3300014969 Bacteria 813
51 Ga0213875_10153643 3300021388 Bacteria 1079
52 Ga0207684_10009701 3300025910 Bacteria 8489
53 Ga0207684_10021830 3300025910 Bacteria 5464
54 Ga0207646_10056292 3300025922 Bacteria 3515
55 Ga0207687_10630442 3300025927 Bacteria 906
56 Ga0207664_10077221 3300025929 Bacteria 2698
57 Ga0207704_10551633 3300025938 Bacteria 936
58 Ga0207651_10155143 3300025960 Bacteria 1788
59 Ga0207702_10066030 3300026078 Unclassified 3100
60 Ga0207683_10213152 3300026121 Bacteria 1758
61 Ga0207428_10033519 3300027907 Bacteria 4217
62 Ga0265337_1006634 3300028556 Bacteria 4433
63 Ga0265338_10015352 3300028800 Bacteria 8425
64 Ga0265338_10113731 3300028800 Bacteria 2174
65 Ga0265325_10001696 3300031241 Bacteria 15299
66 Ga0265327_10005406 3300031251 Bacteria 10661
67 Ga0307408_100035129 3300031548 Bacteria 3515
68 Ga0307413_10004806 3300031824 Bacteria 5934
69 Ga0307410_10012712 3300031852 Bacteria 4880
70 Ga0307410_10022661 3300031852 Bacteria 3887
71 Ga0307410_10505490 3300031852 Unclassified 995
72 Ga0307406_10179134 3300031901 Bacteria 1541
73 Ga0307406_10414940 3300031901 Bacteria 1071
74 Ga0307407_10000302 3300031903 Bacteria 14586
75 Ga0307407_10084658 3300031903 Bacteria 1927
76 Ga0307407_10332448 3300031903 Bacteria 1070
77 Ga0307409_100000194 3300031995 Bacteria 23890
78 Ga0307409_100242951 3300031995 Bacteria 1640
79 Ga0307409_100681747 3300031995 Bacteria 1025
80 Ga0307416_100001037 3300032002 Bacteria 14769
81 Ga0307416_100064295 3300032002 Bacteria 3009
82 Ga0307416_100143552 3300032002 Bacteria 2175
83 Ga0307416_100707085 3300032002 Bacteria 1097
84 Ga0307414_10291645 3300032004 Bacteria 1376
85 Ga0307414_10357840 3300032004 Bacteria 1255
86 Ga0307411_10014558 3300032005 Bacteria 4382
87 Ga0307411_10116101 3300032005 Bacteria 1926
88 Ga0307415_100006323 3300032126 Bacteria 6373
89 Ga0307415_100031407 3300032126 Bacteria 3421
90 Ga0373934_0004590 3300035086 Bacteria 5105
91 Ga0373956_0050141 3300035119 Bacteria 1873
92 Ga0373957_0029244 3300035120 Bacteria 2012
93 Ga0373955_0005317 3300035172 Bacteria 5781
94 Ga0373924_0291809 3300035410 Bacteria 724
95 Ga0373933_0000116 3300035724 Bacteria 51474
96 Ga0373937_0000001 3300036401 Bacteria 478903
97 Ga0395898_0171073 3300037466 Bacteria 2077
98 Ga0395905_0601106 3300037471 Bacteria 1002
99 Ga0436364_0082642 3300037853 Unclassified 1446
100 Ga0395901_0408507 3300038443 Bacteria 1394
101 Ga0436363_1688093 3300039450 Bacteria 4129
102 Ga0436362_0206805 3300039453 Bacteria 2233
103 Ga0439441_004819 3300042001 Bacteria 2065
104 Ga0439455_0024397 3300042012 Unclassified 1463
105 Ga0439458_0047774 3300042157 Bacteria 1051
106 Ga0439460_0037660 3300042461 Unclassified 1407
107 Ga0495629_0544083 3300046459 Bacteria 780
108 Ga0495651_0004181 3300046462 Bacteria 11056
109 Ga0495651_0070571 3300046462 Bacteria 2658
110 Ga0495653_0197009 3300046463 Bacteria 1370
111 Ga0495618_0104676 3300046514 Bacteria 1812
112 Ga0495630_0070187 3300046517 Bacteria 2636
113 Ga0495652_0011982 3300046529 Bacteria 7837
114 Ga0495652_0351443 3300046529 Bacteria 1056
115 Ga0495640_0266027 3300046533 Bacteria 1070
116 Ga0495586_0022676 3300046535 Bacteria 3350
117 Ga0495587_0000087 3300046536 Bacteria 71152
118 Ga0495621_0006601 3300046539 Bacteria 3396
119 Ga0495645_0168712 3300046543 Bacteria 1508
120 Ga0495622_0164942 3300046557 Bacteria 998
121 Ga0495656_0190707 3300046615 Bacteria 1012
122 Ga0495634_0102150 3300046642 Bacteria 1852
123 Ga0495634_0109741 3300046642 Bacteria 1775
124 Ga0495623_0117525 3300046679 Bacteria 1605
125 Ga0495613_0008494 3300046689 Bacteria 7621
126 Ga0495613_0114310 3300046689 Bacteria 1943
127 Ga0495613_0547799 3300046689 Bacteria 774
128 Ga0495604_0007156 3300047317 Bacteria 8837
129 Ga0495674_0572990 3300047319 Bacteria 897
130 Ga0495675_0000227 3300047444 Bacteria 40596
131 Ga0495602_0000086 3300048088 Bacteria 90226
132 Ga0496113_0696561 3300048916 Bacteria 811
133 Ga0501031_0019537 3300049568 Bacteria 4414
134 Ga0501031_0072025 3300049568 Bacteria 2250
135 Ga0501032_0113246 3300049569 Bacteria 1794
136 Ga0501032_0181374 3300049569 Bacteria 1378
137 Ga0501033_0003917 3300049570 Bacteria 12079
138 Ga0501034_0006686 3300049571 Bacteria 12366
139 Ga0501034_0175115 3300049571 Bacteria 2112
140 Ga0501034_0396887 3300049571 Bacteria 1302
141 Ga0501036_0004753 3300049572 Bacteria 10965
142 Ga0501036_0013397 3300049572 Bacteria 6815
143 Ga0501036_0028891 3300049572 Bacteria 4686
144 Ga0501037_0002492 3300049573 Bacteria 13300
145 Ga0501037_0098971 3300049573 Bacteria 2106
146 Ga0501038_0011857 3300049574 Bacteria 7956
147 Ga0501039_0098640 3300049575 Bacteria 2279
148 Ga0501040_0000268 3300049576 Bacteria 30341
149 Ga0501041_0000197 3300049577 Bacteria 27832
150 Ga0501041_0032258 3300049577 Unclassified 3166
151 Ga0501042_0008766 3300049578 Bacteria 6704
152 Ga0501046_0001703 3300049580 Bacteria 21007
153 Ga0501046_0080612 3300049580 Unclassified 2515
154 Ga0501046_0264258 3300049580 Bacteria 1263
155 Ga0501047_0056613 3300049581 Bacteria 3792
156 Ga0501047_0488299 3300049581 Unclassified 1059
157 Ga0501048_0000359 3300049582 Bacteria 31621
158 Ga0501048_0011576 3300049582 Bacteria 6577
159 Ga0501048_0034862 3300049582 Unclassified 3627
160 Ga0501048_0097379 3300049582 Bacteria 2075
161 Ga0501067_0024412 3300049583 Bacteria 3353
162 Ga0501068_0054382 3300049584 Bacteria 2425
163 Ga0501068_0067201 3300049584 Bacteria 2184
164 Ga0501068_0072841 3300049584 Bacteria 2098
165 Ga0501068_0143075 3300049584 Bacteria 1500
166 Ga0501070_0080614 3300049586 Bacteria 2693
167 Ga0501071_0001238 3300049587 Bacteria 14462
168 Ga0501071_0006378 3300049587 Bacteria 7654
169 Ga0501071_0205909 3300049587 Bacteria 1479
170 Ga0501071_0528777 3300049587 Bacteria 905
171 Ga0501074_0025988 3300049590 Bacteria 4246
172 Ga0501074_0336477 3300049590 Bacteria 1071
173 Ga0501075_0001118 3300049591 Bacteria 17266
174 Ga0501076_0078903 3300049592 Unclassified 2642
175 Ga0501076_0136484 3300049592 Bacteria 1991
176 Ga0501076_0756986 3300049592 Bacteria 802
177 Ga0501077_0090434 3300049593 Bacteria 1940
178 Ga0501077_0452805 3300049593 Unclassified 822
179 Ga0501079_0000140 3300049741 Bacteria 39603
180 Ga0501079_0089182 3300049741 Bacteria 2388
181 Ga0501079_0420325 3300049741 Unclassified 1049
182 Ga0501080_0184738 3300049742 Bacteria 1917
183 Ga0501080_0587499 3300049742 Bacteria 989
184 Ga0501081_0000841 3300049743 Bacteria 18169
185 Ga0501081_0023064 3300049743 Bacteria 4169
186 Ga0501081_0056797 3300049743 Unclassified 2706
187 Ga0501083_0085094 3300049744 Bacteria 2092
188 Ga0501083_0093350 3300049744 Bacteria 1987
189 Ga0501035_0009572 3300049822 Bacteria 9010
190 Ga0501035_0172466 3300049822 Unclassified 1868
191 Ga0501044_0059254 3300049823 Bacteria 3923
192 Ga0501044_0523769 3300049823 Bacteria 1085
193 Ga0501045_0000427 3300049824 Bacteria 25750
194 Ga0501045_0019774 3300049824 Bacteria 4805
195 Ga0501045_0039034 3300049824 Unclassified 3455
196 Ga0501045_0101037 3300049824 Bacteria 2135
197 nmdc:mga05p37_131644_c1 3300050507 Unclassified 3069
198 nmdc:mga05p37_159999_c1 3300050507 Bacteria 2751
199 nmdc:mga05p37_48308_c1 3300050507 Bacteria 5234
200 nmdc:mga05p37_732858_c1 3300050507 Bacteria 1092
201 nmdc:mga09592_17792_c1 3300050508 Bacteria 5825
202 nmdc:mga0n895_144590_c1 3300050512 Bacteria 2407
203 nmdc:mga08x19_24416_c1 3300050514 Bacteria 3756
204 nmdc:mga0a205_33754_c1 3300050515 Bacteria 4907
205 Ga0495595_0026293 3300053084 Bacteria 2585
206 Ga0501084_0000426 3300054114 Bacteria 32524
207 Ga0501084_0012338 3300054114 Bacteria 7076
208 Ga0501084_0211860 3300054114 Bacteria 1635
209 Ga0501084_0812017 3300054114 Unclassified 787
210 Ga0501082_0014327 3300060353 Bacteria 6822
211 Ga0501082_0028039 3300060353 Bacteria 4850
212 Ga0501082_0178920 3300060353 Bacteria 1844
213 Ga0466962_0056722 3300061719 Bacteria 1870
214 Ga0530510_0000297 3300061734 Bacteria 31632
215 Ga0530510_0265510 3300061734 Bacteria 1281
216 2837184343 2837183177 Bacteria 4637169
217 Ga0501040_0038499
218 JGI25407J50210_10000118
219 JGI25407J50210_10006026
220 Ga0068868_100081144
221 Ga0070714_100089625
222 Ga0070714_100098495
223 Ga0070710_10133588
224 Ga0070700_100390693
225 Ga0070694_100497499
226 Ga0070708_100037550
227 Ga0070708_100653208
228 Ga0070706_100022554
229 Ga0070706_100030576
230 Ga0070706_100813134
231 Ga0070707_100027376
232 Ga0070698_100002116
233 Ga0070695_100375981
234 Ga0070696_100113324
235 Ga0070704_100826160
236 Ga0068854_100223592
237 Ga0068856_100087671
238 Ga0070702_100240863
239 Ga0068859_100512415
240 Ga0081455_10018737
241 Ga0081455_10118493
242 Ga0081538_10000070
243 Ga0081538_10001558
244 Ga0081538_10139574
245 Ga0081539_10013143
246 Ga0081539_10034839
247 Ga0081539_10045778
248 Ga0070717_10030188
249 Ga0075433_10057781
250 Ga0075434_100094860
251 Ga0075429_100005575
252 Ga0075429_100006075
253 Ga0075436_100015039
254 Ga0097620_100512414
255 Ga0111539_10029856
256 Ga0105245_10368964
257 Ga0114129_10016948
258 Ga0114129_10051899
259 Ga0114129_10168088
260 Ga0114129_10563514
261 Ga0105241_10705460
262 Ga0105242_10253363
263 Ga0105239_10091337
264 Ga0157378_11106258
265 Ga0157380_10192154
266 Ga0157376_11121554
267 Ga0213875_10153643
268 Ga0207684_10009701
269 Ga0207684_10021830
270 Ga0207646_10056292
271 Ga0207687_10630442
272 Ga0207664_10077221
273 Ga0207704_10551633
274 Ga0207651_10155143
275 Ga0207702_10066030
276 Ga0207683_10213152
277 Ga0207428_10033519
278 Ga0265337_1006634
279 Ga0265338_10015352
280 Ga0265338_10113731
281 Ga0265325_10001696
282 Ga0265327_10005406
283 Ga0307408_100035129
284 Ga0307413_10004806
285 Ga0307410_10012712
286 Ga0307410_10022661
287 Ga0307410_10505490
288 Ga0307406_10179134
289 Ga0307406_10414940
290 Ga0307407_10000302
291 Ga0307407_10084658
292 Ga0307407_10332448
293 Ga0307409_100000194
294 Ga0307409_100242951
295 Ga0307409_100681747
296 Ga0307416_100001037
297 Ga0307416_100064295
298 Ga0307416_100143552
299 Ga0307416_100707085
300 Ga0307414_10291645
301 Ga0307414_10357840
302 Ga0307411_10014558
303 Ga0307411_10116101
304 Ga0307415_100006323
305 Ga0307415_100031407
306 Ga0373934_0004590
307 Ga0373956_0050141
308 Ga0373957_0029244
309 Ga0373955_0005317
310 Ga0373924_0291809
311 Ga0373933_0000116
312 Ga0373937_0000001
313 Ga0395898_0171073
314 Ga0395905_0601106
315 Ga0436364_0082642
316 Ga0395901_0408507
317 Ga0436363_1688093
318 Ga0436362_0206805
319 Ga0439441_004819
320 Ga0439455_0024397
321 Ga0439458_0047774
322 Ga0439460_0037660
323 Ga0495629_0544083
324 Ga0495651_0004181
325 Ga0495651_0070571
326 Ga0495653_0197009
327 Ga0495618_0104676
328 Ga0495630_0070187
329 Ga0495652_0011982
330 Ga0495652_0351443
331 Ga0495640_0266027
332 Ga0495586_0022676
333 Ga0495587_0000087
334 Ga0495621_0006601
335 Ga0495645_0168712
336 Ga0495622_0164942
337 Ga0495656_0190707
338 Ga0495634_0102150
339 Ga0495634_0109741
340 Ga0495623_0117525
341 Ga0495613_0008494
342 Ga0495613_0114310
343 Ga0495613_0547799
344 Ga0495604_0007156
345 Ga0495674_0572990
346 Ga0495675_0000227
347 Ga0495602_0000086
348 Ga0496113_0696561
349 Ga0501031_0019537
350 Ga0501031_0072025
351 Ga0501032_0113246
352 Ga0501032_0181374
353 Ga0501033_0003917
354 Ga0501034_0006686
355 Ga0501034_0175115
356 Ga0501034_0396887
357 Ga0501036_0004753
358 Ga0501036_0013397
359 Ga0501036_0028891
360 Ga0501037_0002492
361 Ga0501037_0098971
362 Ga0501038_0011857
363 Ga0501039_0098640
364 Ga0501040_0000268
365 Ga0501041_0000197
366 Ga0501041_0032258
367 Ga0501042_0008766
368 Ga0501046_0001703
369 Ga0501046_0080612
370 Ga0501046_0264258
371 Ga0501047_0056613
372 Ga0501047_0488299
373 Ga0501048_0000359
374 Ga0501048_0011576
375 Ga0501048_0034862
376 Ga0501048_0097379
377 Ga0501067_0024412
378 Ga0501068_0054382
379 Ga0501068_0067201
380 Ga0501068_0072841
381 Ga0501068_0143075
382 Ga0501070_0080614
383 Ga0501071_0001238
384 Ga0501071_0006378
385 Ga0501071_0205909
386 Ga0501071_0528777
387 Ga0501074_0025988
388 Ga0501074_0336477
389 Ga0501075_0001118
390 Ga0501076_0078903
391 Ga0501076_0136484
392 Ga0501076_0756986
393 Ga0501077_0090434
394 Ga0501077_0452805
395 Ga0501079_0000140
396 Ga0501079_0089182
397 Ga0501079_0420325
398 Ga0501080_0184738
399 Ga0501080_0587499
400 Ga0501081_0000841
401 Ga0501081_0023064
402 Ga0501081_0056797
403 Ga0501083_0085094
404 Ga0501083_0093350
405 Ga0501035_0009572
406 Ga0501035_0172466
407 Ga0501044_0059254
408 Ga0501044_0523769
409 Ga0501045_0000427
410 Ga0501045_0019774
411 Ga0501045_0039034
412 Ga0501045_0101037
413 nmdc:mga05p37_131644_c1
414 nmdc:mga05p37_159999_c1
415 nmdc:mga05p37_48308_c1
416 nmdc:mga05p37_732858_c1
417 nmdc:mga09592_17792_c1
418 nmdc:mga0n895_144590_c1
419 nmdc:mga08x19_24416_c1
420 nmdc:mga0a205_33754_c1
421 Ga0495595_0026293
422 Ga0501084_0000426
423 Ga0501084_0012338
424 Ga0501084_0211860
425 Ga0501084_0812017
426 Ga0501082_0014327
427 Ga0501082_0028039
428 Ga0501082_0178920
429 Ga0466962_0056722
430 Ga0530510_0000297
431 Ga0530510_0265510
432 2837184343

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

56

236

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.8436 2 199
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.809 2 199
1vk2-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase (tm0511) from thermotoga maritima at 1.90 a resolution 0.7492 5 197
1mtl-assembly1.cif.gz_A non-productive mug-dna complex 0.7047 25 198
5cys-assembly1.cif.gz_A structure of the enzyme-product complex resulting from tdg action on a gcac mismatch 0.7009 21 200
ID Description Score Start End Superfamily
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8539 2 199 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8469 2 199 3.40.470.10
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8183 2 199 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8116 2 199 3.40.470.10
af_Q58652_1_127_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7112 111 170 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A382UTK1-F1-model_v4 Uracil-DNA glycosylase-like domain-containing protein 0.9774 127 196
AF-A0A7X7S5Z3-F1-model_v4 Uracil-DNA glycosylase 0.9631 130 199
AF-A0A7Y2DEW3-F1-model_v4 Uracil-DNA glycosylase 0.962 96 198 GO:0006281
GO:0046872
GO:0051539
GO:0097506
AF-A0A2V9TRW4-F1-model_v4 Uracil-DNA glycosylase 0.9612 56 199 GO:0006281
GO:0046872
GO:0051539
GO:0097506
AF-A0A2E7MVV2-F1-model_v4 Uracil-DNA glycosylase-like domain-containing protein 0.961 72 199 GO:0006281
GO:0046872
GO:0051539
GO:0097506

Map