F327710

General Info

Members Datasets Scaffolds Average Seq Length
216 157 432 447

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10008514|Ga0265338_1000851411
Length 472
Sequence VAATTDSAADSGNTASESTASEHTFVTVHGDRRSEVGRTLAEPVPQSLGLLDQFGLWGNLGVSLLGFTGAIFVLQPGGDGTPELSLAAALTAIVIGTLLGTLVLALSGIPGAQTGAPSMVLLRGLFGARVSYLPTLLNVLQLFGWSIFELVTIATAAHKVAPALPKWGYVLIAGAATALLTIRPLGAIRVLRRYATAAVLVVMGYLLVQLLRQPLPAFGHGTWGGYWAATDTVVAVAISFAPLAADYMRHSRSPRAAFAGAMAGYSLTQVLCYVIGLLALLTIAHGNADSDHIFGAFIALPLGSLGFAILAARELDQSFADVYSTAVSIQNLRPLWDRRVLAGLITTLTTAGALWLNIDDYENFLTLLGSVFVPLAAVLIADYFSGPPGRWDLSAEARPRWVMLLPWAVGFVLYQLINPGYVSWWASAWTSFGQDIGFTPASWMSASILSFCAAGVVTLLVRGMTAALRRNT

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
69 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
97 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
157 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.76
Metatranscriptomes 2.31
Isolates 0.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.78
Nodule 0
Rhizoplane 3.24
Rhizosphere 87.04
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10008514 3300028800 Bacteria 12436
2 Ga0055540_1000475 3300003792 Bacteria 30956
3 Ga0055540_1001165 3300003792 Bacteria 16325
4 Ga0070658_10000510 3300005327 Bacteria 33665
5 Ga0070658_10077247 3300005327 Bacteria 2731
6 Ga0070680_100000189 3300005336 Bacteria 39692
7 Ga0070682_100080763 3300005337 Bacteria 2103
8 Ga0070660_100117436 3300005339 Bacteria 2122
9 Ga0070660_100184085 3300005339 Bacteria 1691
10 Ga0070668_100173069 3300005347 Bacteria 1759
11 Ga0070714_100013864 3300005435 Bacteria 6464
12 Ga0070714_100077657 3300005435 Bacteria 2884
13 Ga0070714_100083585 3300005435 Bacteria 2784
14 Ga0070714_100097930 3300005435 Bacteria 2579
15 Ga0070714_100259268 3300005435 Bacteria 1610
16 Ga0070713_100007450 3300005436 Bacteria 7684
17 Ga0070710_10002624 3300005437 Bacteria 8541
18 Ga0070710_10085063 3300005437 Bacteria 1854
19 Ga0070711_100057726 3300005439 Bacteria 2689
20 Ga0070678_100134759 3300005456 Bacteria 1968
21 Ga0070681_10073775 3300005458 Bacteria 3374
22 Ga0070681_10089041 3300005458 Bacteria 3038
23 Ga0070698_100031009 3300005471 Bacteria 5543
24 Ga0070679_100001865 3300005530 Bacteria 18957
25 Ga0070679_100031659 3300005530 Bacteria 5228
26 Ga0070679_100127337 3300005530 Bacteria 2528
27 Ga0070684_100044449 3300005535 Bacteria 3842
28 Ga0068853_100051446 3300005539 Bacteria 3545
29 Ga0070686_100049082 3300005544 Bacteria 2676
30 Ga0070696_100081430 3300005546 Bacteria 2294
31 Ga0070693_100003301 3300005547 Bacteria 7496
32 Ga0068857_100032912 3300005577 Bacteria 4583
33 Ga0068857_100063326 3300005577 Bacteria 3287
34 Ga0068854_100038266 3300005578 Bacteria 3372
35 Ga0068856_100017645 3300005614 Bacteria 6919
36 Ga0081455_10010134 3300005937 Bacteria 9603
37 Ga0081538_10000873 3300005981 Bacteria 32578
38 Ga0081538_10001591 3300005981 Bacteria 23294
39 Ga0081538_10001935 3300005981 Bacteria 20723
40 Ga0081538_10051227 3300005981 Bacteria 2482
41 Ga0081539_10032713 3300005985 Bacteria 3181
42 Ga0070717_10050509 3300006028 Bacteria 3418
43 Ga0070717_10144557 3300006028 Bacteria 2053
44 Ga0075432_10014364 3300006058 Bacteria 2698
45 Ga0070716_100005046 3300006173 Bacteria 6367
46 Ga0070712_100007373 3300006175 Bacteria 6862
47 Ga0075369_10019754 3300006186 Bacteria 2754
48 Ga0075430_100068052 3300006846 Bacteria 2988
49 Ga0075431_100185957 3300006847 Bacteria 2130
50 Ga0075429_100003102 3300006880 Bacteria 14112
51 Ga0111539_10003565 3300009094 Bacteria 20519
52 Ga0111539_10005274 3300009094 Bacteria 16732
53 Ga0105245_10225004 3300009098 Bacteria 1812
54 Ga0105245_10354145 3300009098 Bacteria 1455
55 Ga0114129_10008255 3300009147 Bacteria 14850
56 Ga0105242_10288803 3300009176 Bacteria 1492
57 Ga0105249_10047122 3300009553 Bacteria 3926
58 Ga0105246_10186440 3300011119 Bacteria 1602
59 Ga0157370_10019940 3300013104 Bacteria 6708
60 Ga0157369_10006387 3300013105 Bacteria 13667
61 Ga0163163_10039351 3300014325 Bacteria 4615
62 Ga0206354_11296865 3300020081 Bacteria 2542
63 Ga0206353_10730606 3300020082 Bacteria 3650
64 Ga0206353_11295000 3300020082 Unclassified 1551
65 Ga0206353_11564438 3300020082 Bacteria 10580
66 Ga0213874_10007701 3300021377 Bacteria 2596
67 Ga0213875_10023859 3300021388 Bacteria 2919
68 Ga0209051_1000479 3300025303 Bacteria 51667
69 Ga0209051_1001667 3300025303 Bacteria 17934
70 Ga0209051_1003917 3300025303 Bacteria 9489
71 Ga0207699_10041728 3300025906 Bacteria 2652
72 Ga0207705_10003485 3300025909 Bacteria 11971
73 Ga0207707_10006175 3300025912 Bacteria 10466
74 Ga0207707_10066358 3300025912 Bacteria 3142
75 Ga0207693_10045401 3300025915 Bacteria 3453
76 Ga0207660_10011721 3300025917 Bacteria 5717
77 Ga0207660_10068269 3300025917 Bacteria 2578
78 Ga0207657_10163393 3300025919 Bacteria 1807
79 Ga0207657_10175063 3300025919 Bacteria 1737
80 Ga0207652_10022031 3300025921 Bacteria 5265
81 Ga0207652_10057512 3300025921 Bacteria 3349
82 Ga0207700_10021780 3300025928 Bacteria 4383
83 Ga0207700_10035968 3300025928 Bacteria 3572
84 Ga0207664_10021651 3300025929 Bacteria 4786
85 Ga0207664_10090284 3300025929 Bacteria 2510
86 Ga0207664_10230045 3300025929 Bacteria 1611
87 Ga0207665_10010461 3300025939 Bacteria 6096
88 Ga0207665_10081109 3300025939 Bacteria 2233
89 Ga0207640_10208942 3300025981 Bacteria 1485
90 Ga0207639_10038807 3300026041 Bacteria 3545
91 Ga0207708_10007164 3300026075 Bacteria 8240
92 Ga0207674_10001155 3300026116 Bacteria 34231
93 Ga0207674_10021319 3300026116 Bacteria 6982
94 Ga0207675_100014214 3300026118 Bacteria 7423
95 Ga0207428_10037284 3300027907 Bacteria 3956
96 Ga0265337_1000480 3300028556 Bacteria 21119
97 Ga0265319_1002343 3300028563 Bacteria 10425
98 Ga0265334_10001644 3300028573 Bacteria 10718
99 Ga0265334_10004198 3300028573 Bacteria 6437
100 Ga0265323_10005940 3300028653 Bacteria 5160
101 Ga0265336_10004954 3300028666 Bacteria 4966
102 Ga0265338_10000727 3300028800 Bacteria 56128
103 Ga0265338_10008153 3300028800 Bacteria 12784
104 Ga0265324_10002135 3300029957 Bacteria 10397
105 Ga0265763_1000602 3300030763 Bacteria 2259
106 Ga0265332_10018636 3300031238 Bacteria 3062
107 Ga0265320_10013801 3300031240 Bacteria 4630
108 Ga0265325_10040803 3300031241 Bacteria 2435
109 Ga0265339_10029519 3300031249 Bacteria 3111
110 Ga0307513_10014546 3300031456 Bacteria 9582
111 Ga0307513_10239752 3300031456 Bacteria 1619
112 Ga0307509_10144255 3300031507 Bacteria 2310
113 Ga0265314_10002147 3300031711 Bacteria 20651
114 Ga0265342_10025280 3300031712 Bacteria 3736
115 Ga0307405_10019436 3300031731 Bacteria 3773
116 Ga0307413_10035393 3300031824 Bacteria 2863
117 Ga0307407_10005320 3300031903 Bacteria 5572
118 Ga0307407_10016733 3300031903 Bacteria 3659
119 Ga0307409_100045176 3300031995 Bacteria 3323
120 Ga0307416_100057209 3300032002 Bacteria 3153
121 Ga0307414_10007312 3300032004 Bacteria 6205
122 Ga0307414_10070221 3300032004 Bacteria 2521
123 Ga0316212_1001245 3300033547 Bacteria 3437
124 Ga0373934_0006024 3300035086 Bacteria 4487
125 Ga0373955_0051769 3300035172 Bacteria 2237
126 Ga0373924_0011447 3300035410 Bacteria 3295
127 Ga0373931_0077900 3300035691 Bacteria 1823
128 Ga0373925_0000154 3300037068 Bacteria 73830
129 Ga0373925_0050312 3300037068 Bacteria 3108
130 Ga0436364_0038371 3300037853 Bacteria 3473
131 Ga0436364_0207895 3300037853 Bacteria 5819
132 Ga0436364_0322461 3300037853 Bacteria 8264
133 Ga0436364_0809663 3300037853 Bacteria 3864
134 Ga0395901_0102741 3300038443 Bacteria 3000
135 Ga0436360_1071275 3300039438 Bacteria 1523
136 Ga0436363_0435647 3300039450 Bacteria 4105
137 Ga0451802_1007967 3300041460 Bacteria 2432
138 Ga0439448_0005012 3300042005 Bacteria 3764
139 Ga0466966_0051079 3300044684 Bacteria 2629
140 Ga0466961_0039681 3300044693 Bacteria 3018
141 Ga0466961_0086580 3300044693 Bacteria 1980
142 Ga0466963_0030969 3300044694 Bacteria 3455
143 Ga0466963_0077647 3300044694 Bacteria 2244
144 Ga0466959_0062512 3300045049 Bacteria 2705
145 Ga0451576_0051421 3300045051 Bacteria 4320
146 Ga0451576_0067061 3300045051 Bacteria 3735
147 Ga0466958_0027573 3300045836 Bacteria 3362
148 Ga0466958_0103116 3300045836 Bacteria 1776
149 Ga0466967_0006818 3300045976 Bacteria 8143
150 Ga0466967_0009397 3300045976 Bacteria 7251
151 Ga0466967_0032504 3300045976 Bacteria 4407
152 Ga0466967_0085529 3300045976 Bacteria 2855
153 Ga0466967_0148881 3300045976 Bacteria 2186
154 Ga0495592_0012693 3300046454 Bacteria 6404
155 Ga0495651_0084551 3300046462 Bacteria 2391
156 Ga0495653_0023784 3300046463 Bacteria 4945
157 Ga0495664_0005865 3300046477 Bacteria 6758
158 Ga0495664_0009833 3300046477 Bacteria 5362
159 Ga0495618_0004842 3300046514 Bacteria 8219
160 Ga0495652_0030966 3300046529 Bacteria 4688
161 Ga0495640_0009583 3300046533 Bacteria 7532
162 Ga0495586_0053103 3300046535 Bacteria 2195
163 Ga0495667_0077347 3300046559 Bacteria 2164
164 Ga0495635_0042358 3300046663 Bacteria 3143
165 Ga0495599_0075245 3300046678 Bacteria 2108
166 Ga0495623_0073760 3300046679 Bacteria 2121
167 Ga0495646_0020246 3300046680 Bacteria 4208
168 Ga0495600_0026268 3300046809 Bacteria 3757
169 Ga0495676_0106207 3300047321 Bacteria 2069
170 Ga0495680_0035773 3300047322 Bacteria 3995
171 Ga0495684_0016160 3300047471 Bacteria 5747
172 Ga0495686_0008500 3300047472 Bacteria 7527
173 Ga0495602_0040741 3300048088 Bacteria 4253
174 Ga0496108_0053987 3300048911 Bacteria 3372
175 Ga0496109_0042592 3300048912 Bacteria 4113
176 Ga0496110_0014681 3300048913 Bacteria 6510
177 Ga0496110_0073261 3300048913 Unclassified 3040
178 Ga0496111_0005459 3300048914 Bacteria 8149
179 Ga0496114_0139245 3300048917 Unclassified 2100
180 Ga0496126_0015513 3300048929 Bacteria 7660
181 Ga0496126_0021393 3300048929 Bacteria 6317
182 Ga0501031_0063189 3300049568 Bacteria 2412
183 Ga0501036_0103007 3300049572 Bacteria 2414
184 Ga0501038_0035794 3300049574 Bacteria 4358
185 Ga0501040_0007204 3300049576 Bacteria 7201
186 Ga0501041_0006007 3300049577 Bacteria 7104
187 Ga0501042_0007896 3300049578 Bacteria 6999
188 Ga0501047_0040319 3300049581 Bacteria 4516
189 Ga0501047_0092896 3300049581 Bacteria 2896
190 Ga0501048_0016119 3300049582 Bacteria 5510
191 Ga0501068_0078569 3300049584 Bacteria 2022
192 Ga0501071_0006624 3300049587 Bacteria 7526
193 Ga0501071_0037107 3300049587 Bacteria 3478
194 Ga0501072_0004877 3300049588 Bacteria 10204
195 Ga0501072_0006531 3300049588 Bacteria 8883
196 Ga0501075_0049078 3300049591 Bacteria 3172
197 Ga0501076_0019579 3300049592 Bacteria 5174
198 Ga0501077_0009504 3300049593 Bacteria 6045
199 Ga0501079_0026885 3300049741 Bacteria 4412
200 Ga0501079_0029405 3300049741 Bacteria 4218
201 Ga0501081_0002900 3300049743 Bacteria 10874
202 Ga0501045_0071234 3300049824 Bacteria 2558
203 nmdc:mga05p37_72640_c1 3300050507 Bacteria 4234
204 nmdc:mga09592_2631_c1 3300050508 Bacteria 14529
205 nmdc:mga0qj67_27369_c1 3300050509 Bacteria 4419
206 nmdc:mga08y16_39642_c1 3300050511 Bacteria 4942
207 nmdc:mga08y16_95967_c1 3300050511 Bacteria 3088
208 Ga0495601_0007832 3300053077 Bacteria 6285
209 Ga0495595_0017234 3300053084 Bacteria 3107
210 Ga0501084_0049011 3300054114 Bacteria 3535
211 Ga0501082_0014712 3300060353 Bacteria 6739
212 Ga0501082_0067536 3300060353 Bacteria 3079
213 Ga0530510_0002858 3300061734 Bacteria 11868
214 Ga0530510_0007627 3300061734 Bacteria 7535
215 2644489858 2643221687 Bacteria 6500351
216 2902841483 2902837492 Bacteria 6697721
217 Ga0265338_10008514
218 Ga0055540_1000475
219 Ga0055540_1001165
220 Ga0070658_10000510
221 Ga0070658_10077247
222 Ga0070680_100000189
223 Ga0070682_100080763
224 Ga0070660_100117436
225 Ga0070660_100184085
226 Ga0070668_100173069
227 Ga0070714_100013864
228 Ga0070714_100077657
229 Ga0070714_100083585
230 Ga0070714_100097930
231 Ga0070714_100259268
232 Ga0070713_100007450
233 Ga0070710_10002624
234 Ga0070710_10085063
235 Ga0070711_100057726
236 Ga0070678_100134759
237 Ga0070681_10073775
238 Ga0070681_10089041
239 Ga0070698_100031009
240 Ga0070679_100001865
241 Ga0070679_100031659
242 Ga0070679_100127337
243 Ga0070684_100044449
244 Ga0068853_100051446
245 Ga0070686_100049082
246 Ga0070696_100081430
247 Ga0070693_100003301
248 Ga0068857_100032912
249 Ga0068857_100063326
250 Ga0068854_100038266
251 Ga0068856_100017645
252 Ga0081455_10010134
253 Ga0081538_10000873
254 Ga0081538_10001591
255 Ga0081538_10001935
256 Ga0081538_10051227
257 Ga0081539_10032713
258 Ga0070717_10050509
259 Ga0070717_10144557
260 Ga0075432_10014364
261 Ga0070716_100005046
262 Ga0070712_100007373
263 Ga0075369_10019754
264 Ga0075430_100068052
265 Ga0075431_100185957
266 Ga0075429_100003102
267 Ga0111539_10003565
268 Ga0111539_10005274
269 Ga0105245_10225004
270 Ga0105245_10354145
271 Ga0114129_10008255
272 Ga0105242_10288803
273 Ga0105249_10047122
274 Ga0105246_10186440
275 Ga0157370_10019940
276 Ga0157369_10006387
277 Ga0163163_10039351
278 Ga0206354_11296865
279 Ga0206353_10730606
280 Ga0206353_11295000
281 Ga0206353_11564438
282 Ga0213874_10007701
283 Ga0213875_10023859
284 Ga0209051_1000479
285 Ga0209051_1001667
286 Ga0209051_1003917
287 Ga0207699_10041728
288 Ga0207705_10003485
289 Ga0207707_10006175
290 Ga0207707_10066358
291 Ga0207693_10045401
292 Ga0207660_10011721
293 Ga0207660_10068269
294 Ga0207657_10163393
295 Ga0207657_10175063
296 Ga0207652_10022031
297 Ga0207652_10057512
298 Ga0207700_10021780
299 Ga0207700_10035968
300 Ga0207664_10021651
301 Ga0207664_10090284
302 Ga0207664_10230045
303 Ga0207665_10010461
304 Ga0207665_10081109
305 Ga0207640_10208942
306 Ga0207639_10038807
307 Ga0207708_10007164
308 Ga0207674_10001155
309 Ga0207674_10021319
310 Ga0207675_100014214
311 Ga0207428_10037284
312 Ga0265337_1000480
313 Ga0265319_1002343
314 Ga0265334_10001644
315 Ga0265334_10004198
316 Ga0265323_10005940
317 Ga0265336_10004954
318 Ga0265338_10000727
319 Ga0265338_10008153
320 Ga0265324_10002135
321 Ga0265763_1000602
322 Ga0265332_10018636
323 Ga0265320_10013801
324 Ga0265325_10040803
325 Ga0265339_10029519
326 Ga0307513_10014546
327 Ga0307513_10239752
328 Ga0307509_10144255
329 Ga0265314_10002147
330 Ga0265342_10025280
331 Ga0307405_10019436
332 Ga0307413_10035393
333 Ga0307407_10005320
334 Ga0307407_10016733
335 Ga0307409_100045176
336 Ga0307416_100057209
337 Ga0307414_10007312
338 Ga0307414_10070221
339 Ga0316212_1001245
340 Ga0373934_0006024
341 Ga0373955_0051769
342 Ga0373924_0011447
343 Ga0373931_0077900
344 Ga0373925_0000154
345 Ga0373925_0050312
346 Ga0436364_0038371
347 Ga0436364_0207895
348 Ga0436364_0322461
349 Ga0436364_0809663
350 Ga0395901_0102741
351 Ga0436360_1071275
352 Ga0436363_0435647
353 Ga0451802_1007967
354 Ga0439448_0005012
355 Ga0466966_0051079
356 Ga0466961_0039681
357 Ga0466961_0086580
358 Ga0466963_0030969
359 Ga0466963_0077647
360 Ga0466959_0062512
361 Ga0451576_0051421
362 Ga0451576_0067061
363 Ga0466958_0027573
364 Ga0466958_0103116
365 Ga0466967_0006818
366 Ga0466967_0009397
367 Ga0466967_0032504
368 Ga0466967_0085529
369 Ga0466967_0148881
370 Ga0495592_0012693
371 Ga0495651_0084551
372 Ga0495653_0023784
373 Ga0495664_0005865
374 Ga0495664_0009833
375 Ga0495618_0004842
376 Ga0495652_0030966
377 Ga0495640_0009583
378 Ga0495586_0053103
379 Ga0495667_0077347
380 Ga0495635_0042358
381 Ga0495599_0075245
382 Ga0495623_0073760
383 Ga0495646_0020246
384 Ga0495600_0026268
385 Ga0495676_0106207
386 Ga0495680_0035773
387 Ga0495684_0016160
388 Ga0495686_0008500
389 Ga0495602_0040741
390 Ga0496108_0053987
391 Ga0496109_0042592
392 Ga0496110_0014681
393 Ga0496110_0073261
394 Ga0496111_0005459
395 Ga0496114_0139245
396 Ga0496126_0015513
397 Ga0496126_0021393
398 Ga0501031_0063189
399 Ga0501036_0103007
400 Ga0501038_0035794
401 Ga0501040_0007204
402 Ga0501041_0006007
403 Ga0501042_0007896
404 Ga0501047_0040319
405 Ga0501047_0092896
406 Ga0501048_0016119
407 Ga0501068_0078569
408 Ga0501071_0006624
409 Ga0501071_0037107
410 Ga0501072_0004877
411 Ga0501072_0006531
412 Ga0501075_0049078
413 Ga0501076_0019579
414 Ga0501077_0009504
415 Ga0501079_0026885
416 Ga0501079_0029405
417 Ga0501081_0002900
418 Ga0501045_0071234
419 nmdc:mga05p37_72640_c1
420 nmdc:mga09592_2631_c1
421 nmdc:mga0qj67_27369_c1
422 nmdc:mga08y16_39642_c1
423 nmdc:mga08y16_95967_c1
424 Ga0495601_0007832
425 Ga0495595_0017234
426 Ga0501084_0049011
427 Ga0501082_0014712
428 Ga0501082_0067536
429 Ga0530510_0002858
430 Ga0530510_0007627
431 2644489858
432 2902841483

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02133

Transp_cyt_pur

Permease for cytosine/purines, uracil, thiamine, allantoin

55

395

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.7106 22 413
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.6962 22 413
6csf-assembly2.cif.gz_M crystal structure of sodium/alanine symporter agcs with d-alanine bound 0.6697 24 315
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.6456 24 416
4llh-assembly1.cif.gz_B substrate bound outward-open state of the symporter betp 0.6421 14 318
ID Description Score Start End Superfamily
af_A0A1D8PJQ2_67_497_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.7661 17 382 1.10.4160.10
af_Q12119_63_501_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.7309 17 403 1.10.4160.10
af_K7M6D5_61_324_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7307 91 305 1.20.1740.10
af_A0A1D8PTX5_60_507_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.7217 32 371 1.10.4160.10
af_P0AA82_3_417_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.7215 22 420 1.10.4160.10
ID Description Score Start End GO Terms
AF-A0A840QCS5-F1-model_v4 Putative hydroxymethylpyrimidine transporter CytX 0.9065 16 416 GO:0005886
GO:0015209
AF-A0A7V9QVW4-F1-model_v4 deleted 0.901 87 422
AF-A0A4U0RMJ2-F1-model_v4 deleted 0.8974 39 420
AF-A0A7W0LU08-F1-model_v4 Cytosine permease 0.8942 11 347 GO:0005886
GO:0015209
AF-A0A6I3GA93-F1-model_v4 Hydroxymethylpyrimidine transporter CytX 0.8926 13 412 GO:0005886
GO:0015209

Map