F327372

General Info

Members Datasets Scaffolds Average Seq Length
216 148 216 488

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100056931|Ga0070695_1000569312
Length 523
Sequence MTDDIARALTQGEPMAEAEGEASAVGERRRRHGGRAVGERSRLPQQRPWAQPRIRLRPTEVVSADELESIHEASLRVLEQIGMDFLDEGARDLLAAAGARVEAGTQRVRFDPDMVVERIKTAPSSFTLHATNPEHHLQIGSDWTAFGSVASAPNVADLDRGRRVGNREDYQNLIRLCQMLNPVHFFAGYPVEPIDIHASIRHLDAIWDLLTLADKPIHAYSLGRQRNLDAIEMVRIARGIDDATLEREPSLFTVINSSSPLRLDTPMLHGILEMSARNQVIVMTPFTLAEQNAEALAGMVLTQVVRPGAPVVYGGFTSNVDMQSGAPAFGTPEYMRTAMIGGQLARRYNVPYRSSNVSAANAVDAQAAYESVFSLWGAIMGGVNLLMHGAGWMEGGLHAGYEKVIIDAELLGMVEAFLDPVVVDDDTMAFSAMEEVGPGGHFFGAAHTQSRFRTAFHKPMISDWRNYETWQEAGSPEAAGKANGIWKELLRAYEPPPLDEARREELAAFVERRKSEGGVPTDF

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
48 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
95 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
144 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
145 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.57
Nodule 0
Rhizoplane 11.57
Rhizosphere 72.22
Stem 0
Stem Tuber 0
Unclassified 4.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10005555 3300001979 Bacteria 5311
2 JGI25159J45721_1000004 3300002987 Bacteria 215789
3 JGI25165J46597_1000363 3300003214 Bacteria 50542
4 JGI25153J46596_10000024 3300003215 Bacteria 238285
5 JGI25160J50197_1000021 3300003354 Bacteria 215789
6 JGI25161J50226_1000534 3300003374 Bacteria 16346
7 Ga0055526_1008167 3300003771 Bacteria 5269
8 Ga0055524_1000572 3300003775 Bacteria 27327
9 Ga0055543_1000102 3300004625 Bacteria 73861
10 Ga0065165_1000033 3300005262 Bacteria 215827
11 Ga0068869_100057451 3300005334 Bacteria 2841
12 Ga0070687_100010853 3300005343 Bacteria 3961
13 Ga0070692_10015329 3300005345 Bacteria 3624
14 Ga0070669_100078181 3300005353 Bacteria 2459
15 Ga0070671_100016762 3300005355 Bacteria 5925
16 Ga0070688_100037328 3300005365 Bacteria 2959
17 Ga0070701_10024009 3300005438 Bacteria 2945
18 Ga0070708_100027994 3300005445 Bacteria 4844
19 Ga0070706_100009527 3300005467 Bacteria 9032
20 Ga0070706_100098927 3300005467 Bacteria 2710
21 Ga0070707_100000470 3300005468 Bacteria 39843
22 Ga0070707_100000730 3300005468 Bacteria 32771
23 Ga0070707_100012836 3300005468 Bacteria 7822
24 Ga0070698_100032142 3300005471 Bacteria 5437
25 Ga0070699_100113722 3300005518 Bacteria 2377
26 Ga0070695_100003545 3300005545 Bacteria 9114
27 Ga0070695_100056931 3300005545 Bacteria 2525
28 Ga0070696_100007033 3300005546 Bacteria 7511
29 Ga0070696_100009404 3300005546 Bacteria 6544
30 Ga0070696_100013755 3300005546 Bacteria 5434
31 Ga0070696_100029880 3300005546 Bacteria 3727
32 Ga0070696_100139356 3300005546 Bacteria 1771
33 Ga0070704_100121734 3300005549 Bacteria 2006
34 Ga0068856_100016316 3300005614 Bacteria 7188
35 Ga0068860_100043146 3300005843 Bacteria 4304
36 Ga0081539_10027236 3300005985 Bacteria 3625
37 Ga0070712_100061299 3300006175 Bacteria 2657
38 Ga0075428_100016346 3300006844 Bacteria 8200
39 Ga0075433_10017115 3300006852 Bacteria 5995
40 Ga0105240_10045605 3300009093 Bacteria 5559
41 Ga0111539_10143027 3300009094 Bacteria 2800
42 Ga0105245_10018697 3300009098 Bacteria 6063
43 Ga0105245_10082874 3300009098 Bacteria 2935
44 Ga0105245_10164879 3300009098 Bacteria 2105
45 Ga0114129_10032925 3300009147 Bacteria 7324
46 Ga0114129_10060077 3300009147 Bacteria 5315
47 Ga0105243_10026301 3300009148 Bacteria 4454
48 Ga0105249_10292561 3300009553 Bacteria 1630
49 Ga0105239_10154660 3300010375 Bacteria 2561
50 Ga0105246_10065355 3300011119 Bacteria 2543
51 Ga0171463_1007 3300013249 Bacteria 301198
52 Ga0157378_10002622 3300013297 Bacteria 16011
53 Ga0163162_10177411 3300013306 Bacteria 2256
54 Ga0163162_10222213 3300013306 Bacteria 2018
55 Ga0157375_10183012 3300013308 Bacteria 2248
56 Ga0157379_10010662 3300014968 Bacteria 8006
57 Ga0183363_1071 3300015690 Bacteria 30324
58 Ga0213876_10034216 3300021384 Bacteria 2679
59 Ga0213871_10008593 3300021441 Bacteria 2259
60 Ga0209436_102484 3300025208 Bacteria 5509
61 Ga0209437_100060 3300025233 Bacteria 355034
62 Ga0209233_1000095 3300025261 Bacteria 303783
63 Ga0209130_1000017 3300025284 Bacteria 388431
64 Ga0209676_1007426 3300025292 Bacteria 5146
65 Ga0209025_1000161 3300025294 Bacteria 166506
66 Ga0209564_1000013 3300025295 Bacteria 775755
67 Ga0209758_1000256 3300025297 Bacteria 106339
68 Ga0209050_1005641 3300025298 Bacteria 7757
69 Ga0209256_1000153 3300025299 Bacteria 144736
70 Ga0209256_1002031 3300025299 Bacteria 17999
71 Ga0207426_1000006 3300025302 Bacteria 1025969
72 Ga0209257_1026853 3300025304 Bacteria 1930
73 Ga0207688_10035888 3300025901 Bacteria 2747
74 Ga0207684_10000143 3300025910 Bacteria 127272
75 Ga0207684_10021632 3300025910 Bacteria 5491
76 Ga0207684_10062343 3300025910 Bacteria 3166
77 Ga0207684_10159376 3300025910 Bacteria 1943
78 Ga0207695_10031784 3300025913 Bacteria 5783
79 Ga0207663_10114360 3300025916 Bacteria 1837
80 Ga0207646_10012447 3300025922 Bacteria 8178
81 Ga0207646_10013998 3300025922 Bacteria 7637
82 Ga0207686_10011017 3300025934 Bacteria 4936
83 Ga0207669_10007859 3300025937 Bacteria 4968
84 Ga0207712_10019618 3300025961 Bacteria 4420
85 Ga0207648_10115219 3300026089 Bacteria 2362
86 Ga0207676_10111860 3300026095 Bacteria 2287
87 Ga0207675_100033398 3300026118 Bacteria 4794
88 Ga0265339_10020079 3300031249 Bacteria 3909
89 Ga0265331_10004280 3300031250 Bacteria 8942
90 Ga0265316_10173826 3300031344 Bacteria 1606
91 Ga0307513_10097303 3300031456 Bacteria 2978
92 Ga0307408_100055580 3300031548 Bacteria 2867
93 Ga0307408_100088904 3300031548 Bacteria 2328
94 Ga0265313_10000419 3300031595 Bacteria 45369
95 Ga0316576_10058326 3300031727 Bacteria 2824
96 Ga0316578_10024649 3300031728 Bacteria 3375
97 Ga0307405_10068690 3300031731 Bacteria 2269
98 Ga0307412_10125204 3300031911 Bacteria 1858
99 Ga0307416_100000891 3300032002 Bacteria 15770
100 Ga0307415_100000222 3300032126 Bacteria 24917
101 Ga0373927_0001501 3300035695 Bacteria 17568
102 Ga0316584_0002990 3300036712 Bacteria 10874
103 Ga0316584_0115406 3300036712 Bacteria 2008
104 Ga0316584_0140612 3300036712 Bacteria 1800
105 Ga0373925_0002442 3300037068 Bacteria 14897
106 Ga0436364_0014852 3300037853 Bacteria 15300
107 Ga0395901_0145415 3300038443 Bacteria 2492
108 Ga0400483_028739 3300039062 Bacteria 17779
109 Ga0400483_208595 3300039062 Bacteria 1981
110 Ga0436365_0778617 3300039437 Bacteria 3707
111 Ga0436365_1125380 3300039437 Bacteria 2312
112 Ga0436360_1005750 3300039438 Bacteria 6581
113 Ga0436361_0222598 3300039447 Bacteria 2561
114 Ga0436361_0406477 3300039447 Bacteria 1700
115 Ga0436361_0687450 3300039447 Bacteria 2089
116 Ga0451853_1762650 3300041512 Bacteria 1704
117 Ga0495635_0071940 3300046663 Bacteria 2370
118 Ga0495588_0031571 3300046674 Bacteria 2667
119 Ga0495600_0028925 3300046809 Bacteria 3586
120 Ga0495604_0030926 3300047317 Bacteria 4248
121 Ga0496101_0074743 3300048904 Bacteria 2493
122 Ga0496102_0002147 3300048905 Bacteria 16928
123 Ga0496102_0044866 3300048905 Bacteria 4012
124 Ga0496102_0071936 3300048905 Bacteria 3176
125 Ga0496103_0013211 3300048906 Bacteria 4895
126 Ga0496104_0009355 3300048907 Bacteria 8715
127 Ga0496104_0021872 3300048907 Bacteria 5874
128 Ga0496104_0031633 3300048907 Bacteria 4922
129 Ga0496105_0007631 3300048908 Bacteria 8385
130 Ga0496106_0170870 3300048909 Bacteria 1723
131 Ga0496107_0025924 3300048910 Bacteria 4155
132 Ga0496107_0066825 3300048910 Bacteria 2607
133 Ga0496108_0006429 3300048911 Bacteria 9527
134 Ga0496108_0032131 3300048911 Bacteria 4358
135 Ga0496109_0022900 3300048912 Bacteria 5537
136 Ga0496109_0028028 3300048912 Bacteria 5034
137 Ga0496109_0043691 3300048912 Bacteria 4062
138 Ga0496110_0017078 3300048913 Bacteria 6066
139 Ga0496111_0036857 3300048914 Bacteria 3497
140 Ga0496111_0042757 3300048914 Bacteria 3254
141 Ga0496113_0127579 3300048916 Bacteria 1993
142 Ga0496114_0006161 3300048917 Bacteria 9438
143 Ga0496114_0025861 3300048917 Bacteria 4801
144 Ga0496114_0172473 3300048917 Bacteria 1886
145 Ga0496115_0034061 3300048918 Bacteria 4025
146 Ga0496126_0097945 3300048929 Bacteria 2570
147 Ga0496126_0228521 3300048929 Bacteria 1560
148 Ga0501033_0127279 3300049570 Bacteria 1847
149 Ga0501033_0150816 3300049570 Bacteria 1677
150 Ga0501034_0031240 3300049571 Bacteria 5411
151 Ga0501036_0021231 3300049572 Bacteria 5455
152 Ga0501038_0142015 3300049574 Bacteria 1964
153 Ga0501039_0026888 3300049575 Bacteria 4423
154 Ga0501039_0111973 3300049575 Bacteria 2134
155 Ga0501040_0021347 3300049576 Bacteria 4324
156 Ga0501041_0009407 3300049577 Bacteria 5761
157 Ga0501041_0092647 3300049577 Bacteria 1866
158 Ga0501043_0011388 3300049579 Bacteria 6962
159 Ga0501046_0015612 3300049580 Bacteria 6378
160 Ga0501046_0027298 3300049580 Bacteria 4659
161 Ga0501046_0045887 3300049580 Bacteria 3469
162 Ga0501047_0003086 3300049581 Bacteria 15803
163 Ga0501048_0026978 3300049582 Bacteria 4179
164 Ga0501068_0023525 3300049584 Bacteria 3611
165 Ga0501068_0051957 3300049584 Bacteria 2480
166 Ga0501069_0010095 3300049585 Bacteria 4994
167 Ga0501071_0003365 3300049587 Bacteria 9988
168 Ga0501071_0082758 3300049587 Bacteria 2351
169 Ga0501071_0110564 3300049587 Bacteria 2030
170 Ga0501072_0005135 3300049588 Bacteria 9955
171 Ga0501072_0089558 3300049588 Bacteria 2442
172 Ga0501073_0007342 3300049589 Bacteria 8201
173 Ga0501073_0047304 3300049589 Bacteria 3024
174 Ga0501073_0175226 3300049589 Bacteria 1484
175 Ga0501074_0002971 3300049590 Bacteria 11920
176 Ga0501074_0018275 3300049590 Bacteria 5094
177 Ga0501074_0142868 3300049590 Bacteria 1712
178 Ga0501075_0018475 3300049591 Bacteria 5047
179 Ga0501075_0028352 3300049591 Bacteria 4133
180 Ga0501075_0040731 3300049591 Bacteria 3480
181 Ga0501076_0003449 3300049592 Bacteria 11091
182 Ga0501076_0027439 3300049592 Bacteria 4417
183 Ga0501077_0008246 3300049593 Bacteria 6445
184 Ga0501077_0010264 3300049593 Bacteria 5830
185 Ga0501079_0031268 3300049741 Bacteria 4091
186 Ga0501079_0101870 3300049741 Bacteria 2227
187 Ga0501080_0006096 3300049742 Bacteria 10808
188 Ga0501080_0075264 3300049742 Bacteria 3141
189 Ga0501081_0010402 3300049743 Bacteria 6068
190 Ga0501083_0009918 3300049744 Bacteria 6723
191 Ga0501083_0023013 3300049744 Bacteria 4325
192 Ga0501083_0037332 3300049744 Bacteria 3310
193 Ga0501044_0007158 3300049823 Bacteria 12273
194 Ga0501044_0015977 3300049823 Bacteria 8076
195 Ga0501045_0009775 3300049824 Bacteria 6708
196 Ga0501045_0034210 3300049824 Bacteria 3687
197 Ga0501045_0037530 3300049824 Bacteria 3522
198 Ga0501045_0243345 3300049824 Bacteria 1339
199 nmdc:mga05p37_13837_c1 3300050507 Bacteria 9667
200 nmdc:mga05p37_232543_c1 3300050507 Bacteria 2220
201 nmdc:mga09592_64443_c1 3300050508 Bacteria 3102
202 nmdc:mga08x19_63104_c1 3300050514 Bacteria 2403
203 nmdc:mga0a205_25627_c1 3300050515 Bacteria 5619
204 nmdc:mga0a205_38363_c1 3300050515 Bacteria 4608
205 nmdc:mga0a205_56993_c1 3300050515 Bacteria 3772
206 Ga0495612_0000910 3300053078 Bacteria 12084
207 Ga0500641_0058751 3300053096 Bacteria 1597
208 Ga0500590_004519 3300053148 Bacteria 6574
209 Ga0500604_0000694 3300053151 Bacteria 9220
210 Ga0501084_0012788 3300054114 Bacteria 6953
211 Ga0501084_0044181 3300054114 Bacteria 3729
212 Ga0501082_0012751 3300060353 Bacteria 7223
213 Ga0501082_0058227 3300060353 Bacteria 3329
214 Ga0501082_0283280 3300060353 Bacteria 1443
215 Ga0530510_0007493 3300061734 Bacteria 7601
216 Ga0530510_0059900 3300061734 Bacteria 2755

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049589 Ga0501073_0175226 Ga0501073_0175226_284_1462 379
2 3300039447 Ga0436361_0687450 Ga0436361_0687450_878_2071 387
3 3300049824 Ga0501045_0243345 Ga0501045_0243345_96_1298 388
4 3300060353 Ga0501082_0283280 Ga0501082_0283280_25_1227 388
5 3300061734 Ga0530510_0007493 Ga0530510_0007493_51_1331 410
6 3300053151 Ga0500604_0000694 Ga0500604_0000694_58_1344 415
7 3300049585 Ga0501069_0010095 Ga0501069_0010095_1231_2616 417
8 3300031249 Ga0265339_10020079 Ga0265339_100200792 422
9 3300031250 Ga0265331_10004280 Ga0265331_100042803 422
10 3300031595 Ga0265313_10000419 Ga0265313_100004192 422
11 3300005355 Ga0070671_100016762 Ga0070671_1000167622 444
12 3300048929 Ga0496126_0228521 Ga0496126_0228521_101_1537 447
13 3300031548 Ga0307408_100088904 Ga0307408_1000889042 451
14 3300036712 Ga0316584_0002990 Ga0316584_0002990_1833_3314 455
15 3300026095 Ga0207676_10111860 Ga0207676_101118602 458
16 3300041512 Ga0451853_1762650 Ga0451853_1762650_23_1474 458
17 3300048918 Ga0496115_0034061 Ga0496115_0034061_753_2306 458
18 3300025292 Ga0209676_1007426 Ga0209676_10074263 459
19 3300048907 Ga0496104_0009355 Ga0496104_0009355_633_2261 459
20 3300048911 Ga0496108_0032131 Ga0496108_0032131_2125_3753 459
21 3300048912 Ga0496109_0043691 Ga0496109_0043691_2357_3985 459
22 3300039447 Ga0436361_0222598 Ga0436361_0222598_238_1782 460
23 3300049744 Ga0501083_0037332 Ga0501083_0037332_1594_3147 460
24 3300039447 Ga0436361_0406477 Ga0436361_0406477_102_1655 461
25 3300049580 Ga0501046_0045887 Ga0501046_0045887_935_2356 461
26 3300049591 Ga0501075_0040731 Ga0501075_0040731_716_2137 461
27 3300009093 Ga0105240_10045605 Ga0105240_100456053 463
28 3300025913 Ga0207695_10031784 Ga0207695_100317843 463
29 3300026089 Ga0207648_10115219 Ga0207648_101152192 464
30 3300021441 Ga0213871_10008593 Ga0213871_100085932 465
31 3300039438 Ga0436360_1005750 Ga0436360_1005750_4687_6240 465
32 3300025304 Ga0209257_1026853 Ga0209257_10268532 466
33 3300005985 Ga0081539_10027236 Ga0081539_100272362 468
34 3300013306 Ga0163162_10222213 Ga0163162_102222131 468
35 3300025916 Ga0207663_10114360 Ga0207663_101143601 469
36 3300049579 Ga0501043_0011388 Ga0501043_0011388_2892_4436 469
37 3300049823 Ga0501044_0007158 Ga0501044_0007158_7330_8874 469
38 3300053096 Ga0500641_0058751 Ga0500641_0058751_31_1575 469
39 3300003215 JGI25153J46596_10000024 JGI25153J46596_1000002440 470
40 3300005343 Ga0070687_100010853 Ga0070687_1000108532 470
41 3300005353 Ga0070669_100078181 Ga0070669_1000781812 470
42 3300005365 Ga0070688_100037328 Ga0070688_1000373282 470
43 3300005438 Ga0070701_10024009 Ga0070701_100240092 470
44 3300009148 Ga0105243_10026301 Ga0105243_100263013 470
45 3300013297 Ga0157378_10002622 Ga0157378_1000262211 470
46 3300014968 Ga0157379_10010662 Ga0157379_100106625 470
47 3300025297 Ga0209758_1000256 Ga0209758_100025613 470
48 3300025901 Ga0207688_10035888 Ga0207688_100358883 470
49 3300025934 Ga0207686_10011017 Ga0207686_100110171 470
50 3300025937 Ga0207669_10007859 Ga0207669_100078592 470
51 3300026118 Ga0207675_100033398 Ga0207675_1000333984 470
52 3300031456 Ga0307513_10097303 Ga0307513_100973032 470
53 3300031911 Ga0307412_10125204 Ga0307412_101252041 470
54 3300036712 Ga0316584_0115406 Ga0316584_0115406_79_1530 470
55 3300048905 Ga0496102_0071936 Ga0496102_0071936_643_2094 470
56 3300048907 Ga0496104_0031633 Ga0496104_0031633_826_2277 470
57 3300048908 Ga0496105_0007631 Ga0496105_0007631_4302_5753 470
58 3300048910 Ga0496107_0066825 Ga0496107_0066825_475_1926 470
59 3300048914 Ga0496111_0042757 Ga0496111_0042757_1552_3003 470
60 3300048917 Ga0496114_0025861 Ga0496114_0025861_240_1691 470
61 3300049570 Ga0501033_0150816 Ga0501033_0150816_32_1576 470
62 3300049574 Ga0501038_0142015 Ga0501038_0142015_196_1740 470
63 3300049576 Ga0501040_0021347 Ga0501040_0021347_690_2234 470
64 3300049580 Ga0501046_0015612 Ga0501046_0015612_3290_4834 470
65 3300049581 Ga0501047_0003086 Ga0501047_0003086_8317_9861 470
66 3300049584 Ga0501068_0023525 Ga0501068_0023525_1710_3254 470
67 3300049584 Ga0501068_0051957 Ga0501068_0051957_500_2044 470
68 3300049589 Ga0501073_0007342 Ga0501073_0007342_1017_2561 470
69 3300049589 Ga0501073_0047304 Ga0501073_0047304_89_1633 470
70 3300049590 Ga0501074_0018275 Ga0501074_0018275_1700_3244 470
71 3300049593 Ga0501077_0010264 Ga0501077_0010264_3758_5302 470
72 3300049741 Ga0501079_0101870 Ga0501079_0101870_361_1905 470
73 3300049742 Ga0501080_0006096 Ga0501080_0006096_6038_7582 470
74 3300049744 Ga0501083_0009918 Ga0501083_0009918_3494_5038 470
75 3300049744 Ga0501083_0023013 Ga0501083_0023013_531_2075 470
76 3300049823 Ga0501044_0015977 Ga0501044_0015977_5987_7531 470
77 3300049824 Ga0501045_0009775 Ga0501045_0009775_2033_3577 470
78 3300054114 Ga0501084_0044181 Ga0501084_0044181_1428_2972 470
79 3300009147 Ga0114129_10060077 Ga0114129_100600772 471
80 3300032002 Ga0307416_100000891 Ga0307416_10000089113 471
81 3300032126 Ga0307415_100000222 Ga0307415_10000022219 471
82 3300049575 Ga0501039_0111973 Ga0501039_0111973_60_1511 471
83 3300049588 Ga0501072_0005135 Ga0501072_0005135_274_1725 471
84 3300049592 Ga0501076_0027439 Ga0501076_0027439_323_1774 471
85 3300036712 Ga0316584_0140612 Ga0316584_0140612_237_1688 473
86 3300050514 nmdc:mga08x19_63104_c1 nmdc:mga08x19_63104_c1_590_2041 473
87 3300039437 Ga0436365_0778617 Ga0436365_0778617_1843_3393 479
88 3300021384 Ga0213876_10034216 Ga0213876_100342162 480
89 3300037853 Ga0436364_0014852 Ga0436364_0014852_11897_13447 480
90 3300009094 Ga0111539_10143027 Ga0111539_101430272 481
91 3300060353 Ga0501082_0058227 Ga0501082_0058227_961_2532 483
92 3300048929 Ga0496126_0097945 Ga0496126_0097945_50_1600 484
93 3300061734 Ga0530510_0059900 Ga0530510_0059900_905_2476 484
94 3300049575 Ga0501039_0026888 Ga0501039_0026888_1284_2837 485
95 3300049577 Ga0501041_0009407 Ga0501041_0009407_1904_3457 485
96 3300049580 Ga0501046_0027298 Ga0501046_0027298_2785_4338 485
97 3300049582 Ga0501048_0026978 Ga0501048_0026978_1120_2673 485
98 3300049587 Ga0501071_0003365 Ga0501071_0003365_1145_2698 485
99 3300049588 Ga0501072_0089558 Ga0501072_0089558_777_2330 485
100 3300049590 Ga0501074_0002971 Ga0501074_0002971_8179_9732 485
101 3300049591 Ga0501075_0018475 Ga0501075_0018475_987_2540 485
102 3300049592 Ga0501076_0003449 Ga0501076_0003449_7637_9190 485
103 3300049593 Ga0501077_0008246 Ga0501077_0008246_4362_5915 485
104 3300049743 Ga0501081_0010402 Ga0501081_0010402_4255_5808 485
105 3300049824 Ga0501045_0034210 Ga0501045_0034210_375_1928 485
106 3300054114 Ga0501084_0012788 Ga0501084_0012788_274_1827 485
107 3300060353 Ga0501082_0012751 Ga0501082_0012751_3247_4800 485
108 3300005545 Ga0070695_100003545 Ga0070695_1000035454 486
109 3300005546 Ga0070696_100009404 Ga0070696_1000094043 486
110 3300039062 Ga0400483_028739 Ga0400483_028739_1423_2979 486
111 3300039062 Ga0400483_208595 Ga0400483_208595_214_1770 486
112 3300048905 Ga0496102_0002147 Ga0496102_0002147_8413_9939 486
113 3300048906 Ga0496103_0013211 Ga0496103_0013211_1440_2966 486
114 3300048909 Ga0496106_0170870 Ga0496106_0170870_36_1631 486
115 3300048912 Ga0496109_0022900 Ga0496109_0022900_283_1878 486
116 3300005467 Ga0070706_100009527 Ga0070706_1000095274 489
117 3300005468 Ga0070707_100000730 Ga0070707_10000073032 489
118 3300005471 Ga0070698_100032142 Ga0070698_1000321425 489
119 3300005518 Ga0070699_100113722 Ga0070699_1001137222 489
120 3300005546 Ga0070696_100013755 Ga0070696_1000137555 489
121 3300006175 Ga0070712_100061299 Ga0070712_1000612992 489
122 3300025910 Ga0207684_10000143 Ga0207684_10000143113 489
123 3300025910 Ga0207684_10062343 Ga0207684_100623432 489
124 3300025922 Ga0207646_10012447 Ga0207646_100124477 489
125 3300031728 Ga0316578_10024649 Ga0316578_100246492 489
126 3300031727 Ga0316576_10058326 Ga0316576_100583262 490
127 3300005345 Ga0070692_10015329 Ga0070692_100153293 495
128 3300006844 Ga0075428_100016346 Ga0075428_1000163461 495
129 3300050507 nmdc:mga05p37_13837_c1 nmdc:mga05p37_13837_c1_3176_4696 495
130 3300009098 Ga0105245_10018697 Ga0105245_100186973 496
131 3300009553 Ga0105249_10292561 Ga0105249_102925611 496
132 3300010375 Ga0105239_10154660 Ga0105239_101546602 496
133 3300031344 Ga0265316_10173826 Ga0265316_101738261 496
134 3300048904 Ga0496101_0074743 Ga0496101_0074743_927_2483 496
135 3300048905 Ga0496102_0044866 Ga0496102_0044866_2435_3991 496
136 3300048907 Ga0496104_0021872 Ga0496104_0021872_3067_4623 496
137 3300048911 Ga0496108_0006429 Ga0496108_0006429_3918_5474 496
138 3300048912 Ga0496109_0028028 Ga0496109_0028028_1887_3443 496
139 3300048913 Ga0496110_0017078 Ga0496110_0017078_2700_4256 496
140 3300050508 nmdc:mga09592_64443_c1 nmdc:mga09592_64443_c1_880_2403 496
141 3300050515 nmdc:mga0a205_56993_c1 nmdc:mga0a205_56993_c1_1845_3401 496
142 3300005468 Ga0070707_100012836 Ga0070707_1000128367 499
143 3300005546 Ga0070696_100139356 Ga0070696_1001393562 499
144 3300009147 Ga0114129_10032925 Ga0114129_100329256 499
145 3300013308 Ga0157375_10183012 Ga0157375_101830122 499
146 3300031548 Ga0307408_100055580 Ga0307408_1000555802 499
147 3300031731 Ga0307405_10068690 Ga0307405_100686902 499
148 3300038443 Ga0395901_0145415 Ga0395901_0145415_676_2232 499
149 3300048916 Ga0496113_0127579 Ga0496113_0127579_340_1920 499
150 3300048917 Ga0496114_0006161 Ga0496114_0006161_5740_7305 499
151 3300049570 Ga0501033_0127279 Ga0501033_0127279_13_1578 499
152 3300049572 Ga0501036_0021231 Ga0501036_0021231_3570_5135 499
153 3300049587 Ga0501071_0110564 Ga0501071_0110564_267_1832 499
154 3300049591 Ga0501075_0028352 Ga0501075_0028352_482_2047 499
155 3300049741 Ga0501079_0031268 Ga0501079_0031268_407_1981 499
156 3300049742 Ga0501080_0075264 Ga0501080_0075264_993_2558 499
157 3300049824 Ga0501045_0037530 Ga0501045_0037530_341_1906 499
158 3300050507 nmdc:mga05p37_232543_c1 nmdc:mga05p37_232543_c1_235_1800 499
159 3300049571 Ga0501034_0031240 Ga0501034_0031240_1747_3321 500
160 3300009098 Ga0105245_10082874 Ga0105245_100828743 502
161 3300048914 Ga0496111_0036857 Ga0496111_0036857_1579_3147 502
162 3300005549 Ga0070704_100121734 Ga0070704_1001217342 504
163 3300048910 Ga0496107_0025924 Ga0496107_0025924_1012_2646 505
164 3300025910 Ga0207684_10021632 Ga0207684_100216323 506
165 3300005334 Ga0068869_100057451 Ga0068869_1000574512 510
166 3300005445 Ga0070708_100027994 Ga0070708_1000279942 510
167 3300005468 Ga0070707_100000470 Ga0070707_10000047029 510
168 3300005546 Ga0070696_100007033 Ga0070696_1000070334 510
169 3300005546 Ga0070696_100029880 Ga0070696_1000298803 510
170 3300005843 Ga0068860_100043146 Ga0068860_1000431463 510
171 3300025961 Ga0207712_10019618 Ga0207712_100196183 510
172 3300049577 Ga0501041_0092647 Ga0501041_0092647_46_1641 510
173 3300049587 Ga0501071_0082758 Ga0501071_0082758_336_1931 510
174 3300049590 Ga0501074_0142868 Ga0501074_0142868_106_1701 510
175 3300050515 nmdc:mga0a205_38363_c1 nmdc:mga0a205_38363_c1_954_2561 510
176 3300039437 Ga0436365_1125380 Ga0436365_1125380_246_1847 511
177 3300005467 Ga0070706_100098927 Ga0070706_1000989272 512
178 3300006852 Ga0075433_10017115 Ga0075433_100171153 512
179 3300009098 Ga0105245_10164879 Ga0105245_101648792 512
180 3300011119 Ga0105246_10065355 Ga0105246_100653552 512
181 3300025910 Ga0207684_10159376 Ga0207684_101593762 512
182 3300050515 nmdc:mga0a205_25627_c1 nmdc:mga0a205_25627_c1_2055_3653 512
183 3300005545 Ga0070695_100056931 Ga0070695_1000569312 513
184 3300025922 Ga0207646_10013998 Ga0207646_100139983 513
185 3300053078 Ga0495612_0000910 Ga0495612_0000910_6637_8250 513
186 3300001979 JGI24740J21852_10005555 JGI24740J21852_100055553 518
187 3300002987 JGI25159J45721_1000004 JGI25159J45721_100000417 518
188 3300003214 JGI25165J46597_1000363 JGI25165J46597_100036345 518
189 3300003354 JGI25160J50197_1000021 JGI25160J50197_1000021192 518
190 3300003374 JGI25161J50226_1000534 JGI25161J50226_100053411 518
191 3300003771 Ga0055526_1008167 Ga0055526_10081673 518
192 3300003775 Ga0055524_1000572 Ga0055524_10005726 518
193 3300004625 Ga0055543_1000102 Ga0055543_100010217 518
194 3300005262 Ga0065165_1000033 Ga0065165_1000033192 518
195 3300005614 Ga0068856_100016316 Ga0068856_1000163166 518
196 3300013249 Ga0171463_1007 Ga0171463_100792 518
197 3300013306 Ga0163162_10177411 Ga0163162_101774112 518
198 3300015690 Ga0183363_1071 Ga0183363_107115 518
199 3300025208 Ga0209436_102484 Ga0209436_1024846 518
200 3300025233 Ga0209437_100060 Ga0209437_100060233 518
201 3300025261 Ga0209233_1000095 Ga0209233_10000955 518
202 3300025284 Ga0209130_1000017 Ga0209130_1000017191 518
203 3300025294 Ga0209025_1000161 Ga0209025_100016116 518
204 3300025295 Ga0209564_1000013 Ga0209564_1000013639 518
205 3300025298 Ga0209050_1005641 Ga0209050_10056416 518
206 3300025299 Ga0209256_1000153 Ga0209256_1000153127 518
207 3300025299 Ga0209256_1002031 Ga0209256_10020315 518
208 3300025302 Ga0207426_1000006 Ga0207426_1000006190 518
209 3300035695 Ga0373927_0001501 Ga0373927_0001501_4913_6577 518
210 3300037068 Ga0373925_0002442 Ga0373925_0002442_8359_10023 518
211 3300046663 Ga0495635_0071940 Ga0495635_0071940_717_2303 518
212 3300046674 Ga0495588_0031571 Ga0495588_0031571_221_1807 518
213 3300046809 Ga0495600_0028925 Ga0495600_0028925_1268_2854 518
214 3300047317 Ga0495604_0030926 Ga0495604_0030926_2345_3931 518
215 3300048917 Ga0496114_0172473 Ga0496114_0172473_202_1791 518
216 3300053148 Ga0500590_004519 Ga0500590_004519_489_2075 518

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06253

MTTB

Trimethylamine methyltransferase (MTTB)

27

518

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qne-assembly1.cif.gz_B crystal structure of putative methyltransferase (zp_00558420.1) from desulfitobacterium hafniense y51 at 2.30 a resolution 0.9424 48 513
2qne-assembly1.cif.gz_B crystal structure of putative methyltransferase (zp_00558420.1) from desulfitobacterium hafniense y51 at 2.30 a resolution 0.9232 48 513
4yyc-assembly1.cif.gz_A-2 crystal structure of trimethylamine methyltransferase from sinorhizobium meliloti in complex with unknown ligand 0.9217 44 516
4yyc-assembly1.cif.gz_A-2 crystal structure of trimethylamine methyltransferase from sinorhizobium meliloti in complex with unknown ligand 0.905 44 516
7xcn-assembly1.cif.gz_D crystal structure of the mttb-mttc complex at 2.7 a resolution 0.874 20 514
ID Description Score Start End Superfamily
2qneB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Trimethylamine methyltransferase-like 0.9157 55 513 3.20.20.480
2qneB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Trimethylamine methyltransferase-like 0.9137 55 513 3.20.20.480
4yycA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Trimethylamine methyltransferase-like 0.9076 44 511 3.20.20.480
4yycA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Trimethylamine methyltransferase-like 0.8869 44 511 3.20.20.480
3pg8A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.6748 129 412 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3S1DR76-F1-model_v4 Methyltransferase 0.9781 44 303 GO:0008168
GO:0015948
GO:0032259
AF-A0A7V6ZH19-F1-model_v4 Trimethylamine methyltransferase family protein 0.9689 44 518 GO:0008168
GO:0015948
GO:0032259
AF-A0A530N078-F1-model_v4 deleted 0.9689 107 408
AF-A0A530BL94-F1-model_v4 Methyltransferase 0.9688 108 518 GO:0008168
GO:0015948
GO:0032259
AF-X5UD28-F1-model_v4 Methyltransferase (EC 2.1.1.-) 0.968 44 515 GO:0008168
GO:0015948
GO:0032259

Feature Viewer

pLDDT pTM Quality
85.38 0.86 High
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Predicted Structure (AlphaFold2)

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