F327315

General Info

Members Datasets Scaffolds Average Seq Length
216 152 432 383

Family's Representative Sequence

Representative Sequence 3300005438|Ga0070701_10119241|Ga0070701_101192412
Length 400
Sequence MSQTRLPGTPSLLRAINDRAALDLLLERGPLTRAQLGELTGLSKVTASQLVERLEERQLVTRVGELAGGRGPNAQLYAVIASSAYVVGVDVGPTSVIAGSADITGRLTARVEISTDDSDDPVGRVHTAVVEAAKQANASWDRVRRVVLGTPGVVDPASGDISFAFDLPRWHHGLRDALNADLDRPVSFENDVNLAAIAEARVGAAQGVSDFALVWISRGVGLAVVMGDRLHRGSAGAAGEIGYLYVPGGPLPDYTRVGNPRAVTPSFQQTINEKTVRALARTHGFKAPTAAGAVAAALQAGGAGEPVIDELARRVALGVLAVCVVLDPKLVVLAGDVGSAGGSALADRVQEHVARLAPVSPRVVVTEVPGDPVLQGALLTALDATREEVFATPMPGARTA

Samples

Sample ID Description Type Environment
1 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
74 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
75 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
76 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
88 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
108 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
109 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
110 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
111 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
112 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
113 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
114 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
115 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
116 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
117 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
118 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
119 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
120 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
121 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
122 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
123 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
124 2855683550 Micromonospora sp. RP3T Isolate Unclassified
125 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
126 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
127 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
128 2858882152 Micromonospora noduli MED15 Isolate Nodule
129 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
130 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
131 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
132 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
133 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
134 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
135 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
136 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
137 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
138 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
139 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
140 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
141 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
142 2902582711 Micromonospora sp. AP08 Isolate Unclassified
143 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
144 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
145 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
146 649633069 Micromonospora sp. L5 Isolate Unclassified
147 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
148 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
149 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
150 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
151 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
152 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.56
Metatranscriptomes 0
Isolates 19.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.85
Nodule 2.31
Rhizoplane 4.17
Rhizosphere 72.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070701_10119241 3300005438 Bacteria 1484
2 rootH1_10084945 3300003316 Bacteria 1990
3 rootL2_10123694 3300003322 Bacteria 4314
4 Ga0070683_100002715 3300005329 Bacteria 14132
5 Ga0070680_100046243 3300005336 Bacteria 3540
6 Ga0070682_100059703 3300005337 Bacteria 2410
7 Ga0070660_100074510 3300005339 Bacteria 2656
8 Ga0070687_100182368 3300005343 Bacteria 1258
9 Ga0070661_100024616 3300005344 Bacteria 4319
10 Ga0070668_100001660 3300005347 Bacteria 16146
11 Ga0070671_100082771 3300005355 Bacteria 2684
12 Ga0070667_100053840 3300005367 Bacteria 3397
13 Ga0070709_10146163 3300005434 Bacteria 1629
14 Ga0070713_100063475 3300005436 Bacteria 3097
15 Ga0070710_10048893 3300005437 Bacteria 2364
16 Ga0070679_100017906 3300005530 Bacteria 6862
17 Ga0070684_100058488 3300005535 Bacteria 3369
18 Ga0070665_100069915 3300005548 Bacteria 3518
19 Ga0070665_100173115 3300005548 Bacteria 2160
20 Ga0070665_100218667 3300005548 Bacteria 1905
21 Ga0070664_100141478 3300005564 Bacteria 2119
22 Ga0068856_100110264 3300005614 Bacteria 2749
23 Ga0068863_100060482 3300005841 Bacteria 3583
24 Ga0068863_100166163 3300005841 Bacteria 2116
25 Ga0068858_100030226 3300005842 Bacteria 5031
26 Ga0068862_100074833 3300005844 Bacteria 2928
27 Ga0081455_10074156 3300005937 Bacteria 2811
28 Ga0081540_1009635 3300005983 Bacteria 6639
29 Ga0081539_10000529 3300005985 Bacteria 79493
30 Ga0081539_10000706 3300005985 Bacteria 66923
31 Ga0081539_10003161 3300005985 Bacteria 20899
32 Ga0081539_10005473 3300005985 Bacteria 12926
33 Ga0081539_10016585 3300005985 Bacteria 5244
34 Ga0081539_10056118 3300005985 Bacteria 2187
35 Ga0075428_100002921 3300006844 Bacteria 18616
36 Ga0075428_100008589 3300006844 Bacteria 11328
37 Ga0075428_100016121 3300006844 Bacteria 8260
38 Ga0075428_100246524 3300006844 Bacteria 1926
39 Ga0075428_100247052 3300006844 Bacteria 1923
40 Ga0075428_100529898 3300006844 Bacteria 1260
41 Ga0075430_100000172 3300006846 Bacteria 42600
42 Ga0075430_100004276 3300006846 Bacteria 12054
43 Ga0075430_100009214 3300006846 Bacteria 8343
44 Ga0075431_100004698 3300006847 Bacteria 13415
45 Ga0075431_100023510 3300006847 Bacteria 6307
46 Ga0075431_100029166 3300006847 Bacteria 5676
47 Ga0075431_100095672 3300006847 Bacteria 3066
48 Ga0075431_100107253 3300006847 Bacteria 2882
49 Ga0075434_100407309 3300006871 Bacteria 1381
50 Ga0075429_100003872 3300006880 Bacteria 12784
51 Ga0075429_100016457 3300006880 Bacteria 6408
52 Ga0075429_100027654 3300006880 Bacteria 4923
53 Ga0111539_10101521 3300009094 Bacteria 3377
54 Ga0114129_10000056 3300009147 Bacteria 99329
55 Ga0114129_10001563 3300009147 Bacteria 31087
56 Ga0114129_10001688 3300009147 Bacteria 30106
57 Ga0114129_10132587 3300009147 Bacteria 3421
58 Ga0114129_10205303 3300009147 Bacteria 2666
59 Ga0105248_10066088 3300009177 Bacteria 4061
60 Ga0157369_10002337 3300013105 Bacteria 22828
61 Ga0163163_10140313 3300014325 Bacteria 2459
62 Ga0163163_10312400 3300014325 Bacteria 1625
63 Ga0157379_10062651 3300014968 Bacteria 3326
64 Ga0157379_10084447 3300014968 Bacteria 2845
65 Ga0207699_10246672 3300025906 Bacteria 1229
66 Ga0207705_10023302 3300025909 Bacteria 4417
67 Ga0207660_10180426 3300025917 Bacteria 1639
68 Ga0207652_10026487 3300025921 Bacteria 4830
69 Ga0207700_10068298 3300025928 Bacteria 2724
70 Ga0207664_10320601 3300025929 Bacteria 1367
71 Ga0207690_10068574 3300025932 Bacteria 2437
72 Ga0207665_10061590 3300025939 Bacteria 2544
73 Ga0207711_10134518 3300025941 Bacteria 2219
74 Ga0207661_10004905 3300025944 Bacteria 9376
75 Ga0207661_10108938 3300025944 Bacteria 2339
76 Ga0207679_10033926 3300025945 Bacteria 3596
77 Ga0207679_10063499 3300025945 Bacteria 2757
78 Ga0207668_10013318 3300025972 Bacteria 5059
79 Ga0207677_10181843 3300026023 Bacteria 1655
80 Ga0207641_10049748 3300026088 Bacteria 3543
81 Ga0207641_10140973 3300026088 Bacteria 2175
82 Ga0207676_10122066 3300026095 Bacteria 2199
83 Ga0207674_10096542 3300026116 Bacteria 2940
84 Ga0207698_10235879 3300026142 Bacteria 1664
85 Ga0268266_10157105 3300028379 Bacteria 2055
86 Ga0307517_10117566 3300028786 Bacteria 1984
87 Ga0307515_10000045 3300028794 Bacteria 301029
88 Ga0307515_10023432 3300028794 Bacteria 10818
89 Ga0307515_10049305 3300028794 Bacteria 6340
90 Ga0307515_10089596 3300028794 Bacteria 3871
91 Ga0307512_10005856 3300030522 Bacteria 12649
92 Ga0307512_10008818 3300030522 Bacteria 9784
93 Ga0307513_10016960 3300031456 Bacteria 8750
94 Ga0307408_100045924 3300031548 Bacteria 3122
95 Ga0307508_10018636 3300031616 Bacteria 6309
96 Ga0307508_10026477 3300031616 Bacteria 5256
97 Ga0307508_10055927 3300031616 Bacteria 3495
98 Ga0307508_10103614 3300031616 Bacteria 2442
99 Ga0307508_10192794 3300031616 Bacteria 1639
100 Ga0307516_10001380 3300031730 Bacteria 33605
101 Ga0307516_10087129 3300031730 Bacteria 2957
102 Ga0307405_10012007 3300031731 Bacteria 4565
103 Ga0307405_10024445 3300031731 Bacteria 3451
104 Ga0307413_10053196 3300031824 Bacteria 2450
105 Ga0307410_10018192 3300031852 Bacteria 4241
106 Ga0307410_10092588 3300031852 Bacteria 2149
107 Ga0307410_10120345 3300031852 Bacteria 1914
108 Ga0326468_10000597 3300031889 Bacteria 3740
109 Ga0307406_10002969 3300031901 Bacteria 9250
110 Ga0307406_10046403 3300031901 Bacteria 2733
111 Ga0307406_10140101 3300031901 Bacteria 1711
112 Ga0307407_10025010 3300031903 Bacteria 3141
113 Ga0307407_10120286 3300031903 Bacteria 1664
114 Ga0307412_10024772 3300031911 Bacteria 3708
115 Ga0307409_100000022 3300031995 Bacteria 54159
116 Ga0307409_100025473 3300031995 Bacteria 4150
117 Ga0307409_100038368 3300031995 Bacteria 3543
118 Ga0307409_100205631 3300031995 Bacteria 1765
119 Ga0307416_100059667 3300032002 Bacteria 3101
120 Ga0307416_100119130 3300032002 Bacteria 2348
121 Ga0307416_100434853 3300032002 Bacteria 1360
122 Ga0307415_100000044 3300032126 Bacteria 53074
123 Ga0307415_100140396 3300032126 Bacteria 1844
124 Ga0307415_100247769 3300032126 Bacteria 1445
125 Ga0373940_0005858 3300035088 Bacteria 2690
126 Ga0373951_0000067 3300035091 Bacteria 41690
127 Ga0373942_0000007 3300035207 Bacteria 41229
128 Ga0373962_0002291 3300035242 Bacteria 4573
129 Ga0373937_0023060 3300036401 Bacteria 5601
130 Ga0395900_0021998 3300037418 Bacteria 6520
131 Ga0395901_0004966 3300038443 Bacteria 13424
132 Ga0439459_0006030 3300042438 Bacteria 2009
133 Ga0495639_0088259 3300046475 Bacteria 1452
134 Ga0495594_0005635 3300046499 Bacteria 6438
135 Ga0495594_0037367 3300046499 Bacteria 2649
136 Ga0495606_0000307 3300046507 Bacteria 84368
137 Ga0495632_0024026 3300046519 Bacteria 3245
138 Ga0495668_0000324 3300046616 Bacteria 65441
139 Ga0495625_0000142 3300046660 Bacteria 110278
140 Ga0495593_0147683 3300047673 Bacteria 1190
141 Ga0495626_0000029 3300048091 Bacteria 202868
142 Ga0496108_0000111 3300048911 Bacteria 82745
143 Ga0496108_0055535 3300048911 Bacteria 3325
144 Ga0496108_0270461 3300048911 Bacteria 1479
145 Ga0496109_0005713 3300048912 Bacteria 10412
146 Ga0496109_0276927 3300048912 Bacteria 1581
147 Ga0496110_0004793 3300048913 Bacteria 10532
148 Ga0496111_0004772 3300048914 Bacteria 8599
149 Ga0496112_0007675 3300048915 Bacteria 9598
150 Ga0496113_0001892 3300048916 Bacteria 11944
151 Ga0501031_0024698 3300049568 Bacteria 3918
152 Ga0501032_0102548 3300049569 Bacteria 1896
153 Ga0501039_0033766 3300049575 Bacteria 3947
154 Ga0501046_0030586 3300049580 Bacteria 4369
155 Ga0501048_0024022 3300049582 Bacteria 4452
156 Ga0501069_0102721 3300049585 Bacteria 1623
157 Ga0501074_0201494 3300049590 Bacteria 1418
158 Ga0501044_0051170 3300049823 Bacteria 4259
159 nmdc:mga05p37_106_c2 3300050507 Bacteria 31952
160 nmdc:mga05p37_277395_c1 3300050507 Bacteria 2001
161 nmdc:mga05p37_43965_c1 3300050507 Bacteria 5495
162 nmdc:mga05p37_65014_c1 3300050507 Bacteria 4489
163 nmdc:mga09592_283_c1 3300050508 Bacteria 37042
164 nmdc:mga09592_29150_c1 3300050508 Bacteria 4591
165 nmdc:mga0qj67_263_c2 3300050509 Bacteria 17708
166 nmdc:mga0qj67_4530_c1 3300050509 Bacteria 10068
167 nmdc:mga0qj67_6_c1 3300050509 Bacteria 17977
168 nmdc:mga0qj67_99479_c1 3300050509 Bacteria 2343
169 nmdc:mga06r32_18590_c1 3300050510 Bacteria 6365
170 nmdc:mga06r32_5317_c1 3300050510 Bacteria 7560
171 Ga0500646_0000663 3300053090 Bacteria 9865
172 Ga0500583_0029773 3300053092 Bacteria 2384
173 Ga0500652_008333 3300053131 Bacteria 3449
174 Ga0500588_0006805 3300053146 Bacteria 2611
175 2515496135 2515154088 Bacteria 5526283
176 2515719903 2515154129 Bacteria 5584369
177 2515758420 2515154137 Bacteria 5711575
178 2516082452 2515154202 Bacteria 5471270
179 2516090399 2515154203 Bacteria 5458536
180 2623587090 2622736626 Bacteria 7181580
181 2676480866 2675903059 Bacteria 8644972
182 2753264863 2751185782 Bacteria 11227053
183 2772642489 2772190715 Bacteria 6959372
184 2831937739 2831935698 Bacteria 5963223
185 2832007454 2832004796 Bacteria 6538017
186 2855671213 2855670206 Bacteria 7120389
187 2855682413 2855676851 Bacteria 7063653
188 2855689592 2855683550 Bacteria 7134265
189 2856860905 2856858025 Bacteria 7255264
190 2857295546 2857288857 Bacteria 7189066
191 2858850699 2858848962 Bacteria 6963058
192 2858883930 2858882152 Bacteria 7230291
193 2858889919 2858888857 Bacteria 7060307
194 2858900770 2858895516 Bacteria 7378898
195 2858903621 2858902515 Bacteria 7086037
196 2866065999 2866065130 Bacteria 6518152
197 2867305004 2867302475 Bacteria 7087181
198 2867315786 2867312974 Bacteria 7058875
199 2867323748 2867319477 Bacteria 7069771
200 2867508374 2867507094 Bacteria 6506033
201 2869050884 2869048445 Bacteria 6875584
202 2869071338 2869068681 Bacteria 7205615
203 2880493207 2880489317 Bacteria 7096270
204 2880499101 2880495981 Bacteria 7340502
205 2887482970 2887478801 Bacteria 8972725
206 2902587149 2902582711 Bacteria 6187705
207 2929221097 2929219909 Bacteria 6984360
208 2929227691 2929226422 Bacteria 7248583
209 2996222634 2996221748 Bacteria 6799777
210 649811657 649633069 Bacteria 6962533
211 8001782058 8001781756 Bacteria 9586736
212 8003831211 8003830390 Bacteria 6541657
213 8003863857 8003856774 Bacteria 7675274
214 8054705104 8054704163 Bacteria 7247792
215 8054730710 8054727385 Bacteria 7558670
216 8054736360 8054734606 Bacteria 6947278
217 Ga0070701_10119241
218 rootH1_10084945
219 rootL2_10123694
220 Ga0070683_100002715
221 Ga0070680_100046243
222 Ga0070682_100059703
223 Ga0070660_100074510
224 Ga0070687_100182368
225 Ga0070661_100024616
226 Ga0070668_100001660
227 Ga0070671_100082771
228 Ga0070667_100053840
229 Ga0070709_10146163
230 Ga0070713_100063475
231 Ga0070710_10048893
232 Ga0070679_100017906
233 Ga0070684_100058488
234 Ga0070665_100069915
235 Ga0070665_100173115
236 Ga0070665_100218667
237 Ga0070664_100141478
238 Ga0068856_100110264
239 Ga0068863_100060482
240 Ga0068863_100166163
241 Ga0068858_100030226
242 Ga0068862_100074833
243 Ga0081455_10074156
244 Ga0081540_1009635
245 Ga0081539_10000529
246 Ga0081539_10000706
247 Ga0081539_10003161
248 Ga0081539_10005473
249 Ga0081539_10016585
250 Ga0081539_10056118
251 Ga0075428_100002921
252 Ga0075428_100008589
253 Ga0075428_100016121
254 Ga0075428_100246524
255 Ga0075428_100247052
256 Ga0075428_100529898
257 Ga0075430_100000172
258 Ga0075430_100004276
259 Ga0075430_100009214
260 Ga0075431_100004698
261 Ga0075431_100023510
262 Ga0075431_100029166
263 Ga0075431_100095672
264 Ga0075431_100107253
265 Ga0075434_100407309
266 Ga0075429_100003872
267 Ga0075429_100016457
268 Ga0075429_100027654
269 Ga0111539_10101521
270 Ga0114129_10000056
271 Ga0114129_10001563
272 Ga0114129_10001688
273 Ga0114129_10132587
274 Ga0114129_10205303
275 Ga0105248_10066088
276 Ga0157369_10002337
277 Ga0163163_10140313
278 Ga0163163_10312400
279 Ga0157379_10062651
280 Ga0157379_10084447
281 Ga0207699_10246672
282 Ga0207705_10023302
283 Ga0207660_10180426
284 Ga0207652_10026487
285 Ga0207700_10068298
286 Ga0207664_10320601
287 Ga0207690_10068574
288 Ga0207665_10061590
289 Ga0207711_10134518
290 Ga0207661_10004905
291 Ga0207661_10108938
292 Ga0207679_10033926
293 Ga0207679_10063499
294 Ga0207668_10013318
295 Ga0207677_10181843
296 Ga0207641_10049748
297 Ga0207641_10140973
298 Ga0207676_10122066
299 Ga0207674_10096542
300 Ga0207698_10235879
301 Ga0268266_10157105
302 Ga0307517_10117566
303 Ga0307515_10000045
304 Ga0307515_10023432
305 Ga0307515_10049305
306 Ga0307515_10089596
307 Ga0307512_10005856
308 Ga0307512_10008818
309 Ga0307513_10016960
310 Ga0307408_100045924
311 Ga0307508_10018636
312 Ga0307508_10026477
313 Ga0307508_10055927
314 Ga0307508_10103614
315 Ga0307508_10192794
316 Ga0307516_10001380
317 Ga0307516_10087129
318 Ga0307405_10012007
319 Ga0307405_10024445
320 Ga0307413_10053196
321 Ga0307410_10018192
322 Ga0307410_10092588
323 Ga0307410_10120345
324 Ga0326468_10000597
325 Ga0307406_10002969
326 Ga0307406_10046403
327 Ga0307406_10140101
328 Ga0307407_10025010
329 Ga0307407_10120286
330 Ga0307412_10024772
331 Ga0307409_100000022
332 Ga0307409_100025473
333 Ga0307409_100038368
334 Ga0307409_100205631
335 Ga0307416_100059667
336 Ga0307416_100119130
337 Ga0307416_100434853
338 Ga0307415_100000044
339 Ga0307415_100140396
340 Ga0307415_100247769
341 Ga0373940_0005858
342 Ga0373951_0000067
343 Ga0373942_0000007
344 Ga0373962_0002291
345 Ga0373937_0023060
346 Ga0395900_0021998
347 Ga0395901_0004966
348 Ga0439459_0006030
349 Ga0495639_0088259
350 Ga0495594_0005635
351 Ga0495594_0037367
352 Ga0495606_0000307
353 Ga0495632_0024026
354 Ga0495668_0000324
355 Ga0495625_0000142
356 Ga0495593_0147683
357 Ga0495626_0000029
358 Ga0496108_0000111
359 Ga0496108_0055535
360 Ga0496108_0270461
361 Ga0496109_0005713
362 Ga0496109_0276927
363 Ga0496110_0004793
364 Ga0496111_0004772
365 Ga0496112_0007675
366 Ga0496113_0001892
367 Ga0501031_0024698
368 Ga0501032_0102548
369 Ga0501039_0033766
370 Ga0501046_0030586
371 Ga0501048_0024022
372 Ga0501069_0102721
373 Ga0501074_0201494
374 Ga0501044_0051170
375 nmdc:mga05p37_106_c2
376 nmdc:mga05p37_277395_c1
377 nmdc:mga05p37_43965_c1
378 nmdc:mga05p37_65014_c1
379 nmdc:mga09592_283_c1
380 nmdc:mga09592_29150_c1
381 nmdc:mga0qj67_263_c2
382 nmdc:mga0qj67_4530_c1
383 nmdc:mga0qj67_6_c1
384 nmdc:mga0qj67_99479_c1
385 nmdc:mga06r32_18590_c1
386 nmdc:mga06r32_5317_c1
387 Ga0500646_0000663
388 Ga0500583_0029773
389 Ga0500652_008333
390 Ga0500588_0006805
391 2515496135
392 2515719903
393 2515758420
394 2516082452
395 2516090399
396 2623587090
397 2676480866
398 2753264863
399 2772642489
400 2831937739
401 2832007454
402 2855671213
403 2855682413
404 2855689592
405 2856860905
406 2857295546
407 2858850699
408 2858883930
409 2858889919
410 2858900770
411 2858903621
412 2866065999
413 2867305004
414 2867315786
415 2867323748
416 2867508374
417 2869050884
418 2869071338
419 2880493207
420 2880499101
421 2887482970
422 2902587149
423 2929221097
424 2929227691
425 2996222634
426 649811657
427 8001782058
428 8003831211
429 8003863857
430 8054705104
431 8054730710
432 8054736360

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12802

MarR_2

MarR family

17

71

0.9

PF00480

ROK

ROK family

86

384

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yhx-assembly2.cif.gz_H structure of lactococcus lactis zitr, wild type 0.9503 17 80
4yif-assembly3.cif.gz_E crystal structure of rv0880 0.9471 16 80
2qww-assembly4.cif.gz_G crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.946 16 80
3bdd-assembly1.cif.gz_B crystal structure of a putative multiple antibiotic-resistance repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a resolution 0.936 16 80
2qww-assembly3.cif.gz_E crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.9323 16 80
ID Description Score Start End Superfamily
4kmfA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9218 13 80 1.10.10.10
af_P15082_1_58_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9153 14 63 1.10.10.10
4awxB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9141 18 79 1.10.10.10
3bddD00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9087 16 80 1.10.10.10
4g9yA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9056 17 80 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A543B1A4-F1-model_v4 Putative NBD/HSP70 family sugar kinase 0.9558 1 388 GO:0016301
AF-A0A4R4Y409-F1-model_v4 ROK family transcriptional regulator 0.952 13 388 GO:0003700
GO:0003824
AF-A0A543B1A4-F1-model_v4 Putative NBD/HSP70 family sugar kinase 0.951 1 388 GO:0016301
AF-C4RB36-F1-model_v4 ROK-family protein 0.9482 213 393 GO:0003824
AF-A0A545AQ07-F1-model_v4 ROK family transcriptional regulator 0.947 1 391 GO:0003824

Map