F325861

General Info

Members Datasets Scaffolds Average Seq Length
214 177 186 332

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2925326138|2925334353
Length 383
Sequence VRRDADAETEAVAAAVGDANHATGGGDIAGGPSVGAAASSFRGEAGSHAGETLLRVEGLTKYFPVRKGFFGRTVGQVKAVDDVSLTVRQGETFGLVGESGCGKSTLGRCILRAIEPTGGTIRFRERGGTEVDVRALDKQGLRSVRREMQLVFQDPYSSLNPRMTVAEIVGEPLVCHGVARGSELRRRVISLIEMVGLSARHLERYPHAFSGGQRQRIGIARALATDPGFLICDEAVSALDVSVQAQILNLLRELQERLALSYLFISHDLGVIRHISDRVGVMYVGKLVETAGTEALFARPHHPYTEALLSSKPIPDPRRKAERIVLSGEVANPANPPSGCYFHPRCPYARDICKTAAPPMKQVADNHYAACHFAGELNLRGAL

Samples

Sample ID Description Type Environment
1 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
2 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
3 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
4 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
5 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
6 2818991459 Paenibacillus sp. 597 Isolate Unclassified
7 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
8 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
9 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
10 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
11 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
12 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
13 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
14 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
15 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
16 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
17 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
18 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
19 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
20 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
21 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
22 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
23 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
24 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
25 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
26 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
27 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
28 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
29 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
30 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
36 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
37 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
38 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
41 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
42 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
43 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
44 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
45 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
46 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
49 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
50 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
51 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
52 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
53 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
54 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
58 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
59 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
60 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
61 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
62 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
63 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
66 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
67 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
68 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
69 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
70 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
72 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
77 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
78 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
83 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
84 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
116 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
117 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
118 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
121 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
129 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
132 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
142 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
143 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.45
Metatranscriptomes 0.47
Isolates 13.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.21
Nodule 0.93
Rhizoplane 1.87
Rhizosphere 77.1
Stem 0
Stem Tuber 0
Unclassified 8.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055538_1000002 3300003751 Bacteria 999437
2 Ga0055539_1000002 3300003752 Bacteria 999437
3 Ga0055533_1000004 3300003756 Bacteria 999437
4 Ga0055525_1000002 3300003759 Bacteria 999437
5 Ga0055524_1000326 3300003775 Bacteria 44488
6 Ga0055530_10001326 3300003791 Bacteria 18559
7 Ga0055530_10001465 3300003791 Bacteria 17186
8 Ga0055540_1000073 3300003792 Bacteria 117148
9 Ga0055531_10002033 3300003794 Bacteria 13996
10 Ga0055541_1000043 3300003841 Bacteria 161703
11 Ga0070676_10080558 3300005328 Bacteria 1974
12 Ga0068869_100023659 3300005334 Bacteria 4248
13 Ga0070680_100302206 3300005336 Bacteria 1357
14 Ga0070660_100046336 3300005339 Bacteria 3333
15 Ga0070691_10047411 3300005341 Bacteria 2043
16 Ga0070688_100134066 3300005365 Bacteria 1674
17 Ga0070688_100153711 3300005365 Bacteria 1575
18 Ga0070713_100049507 3300005436 Bacteria 3467
19 Ga0070701_10011779 3300005438 Bacteria 3925
20 Ga0070700_100104721 3300005441 Bacteria 1870
21 Ga0070694_100002431 3300005444 Bacteria 10986
22 Ga0070694_100065610 3300005444 Bacteria 2487
23 Ga0070708_100117157 3300005445 Bacteria 2453
24 Ga0070681_10008917 3300005458 Bacteria 9857
25 Ga0070681_10296525 3300005458 Bacteria 1527
26 Ga0070685_10031173 3300005466 Bacteria 2977
27 Ga0070699_100170393 3300005518 Bacteria 1929
28 Ga0070679_100027098 3300005530 Bacteria 5636
29 Ga0070697_100190906 3300005536 Bacteria 1739
30 Ga0070695_100000071 3300005545 Bacteria 40697
31 Ga0070695_100019867 3300005545 Bacteria 4097
32 Ga0070696_100039536 3300005546 Bacteria 3256
33 Ga0070696_100040734 3300005546 Bacteria 3208
34 Ga0070696_100213041 3300005546 Bacteria 1447
35 Ga0070704_100087537 3300005549 Bacteria 2312
36 Ga0070704_100245440 3300005549 Bacteria 1468
37 Ga0068855_100070423 3300005563 Bacteria 4068
38 Ga0068857_100144663 3300005577 Bacteria 2150
39 Ga0068856_100292501 3300005614 Bacteria 1646
40 Ga0068859_100257186 3300005617 Bacteria 1837
41 Ga0068864_100015650 3300005618 Bacteria 6310
42 Ga0068870_10028252 3300005840 Bacteria 2815
43 Ga0068860_100236876 3300005843 Bacteria 1775
44 Ga0081455_10003971 3300005937 Bacteria 16775
45 Ga0081538_10000183 3300005981 Bacteria 68671
46 Ga0075428_100004687 3300006844 Bacteria 15136
47 Ga0075430_100002830 3300006846 Bacteria 14517
48 Ga0075430_100004508 3300006846 Bacteria 11742
49 Ga0075431_100003412 3300006847 Bacteria 15415
50 Ga0075433_10005319 3300006852 Bacteria 10096
51 Ga0075434_100116878 3300006871 Bacteria 2680
52 Ga0075434_100139233 3300006871 Bacteria 2446
53 Ga0075429_100004219 3300006880 Bacteria 12310
54 Ga0075429_100125775 3300006880 Bacteria 2242
55 Ga0097620_100257178 3300006931 Bacteria 1837
56 Ga0079104_1000056 3300006946 Bacteria 166276
57 Ga0075435_100151647 3300007076 Bacteria 1949
58 Ga0075435_100357306 3300007076 Bacteria 1253
59 Ga0105240_10080093 3300009093 Bacteria 4017
60 Ga0111539_10033680 3300009094 Bacteria 6218
61 Ga0111539_10268803 3300009094 Bacteria 1985
62 Ga0114129_10001980 3300009147 Bacteria 28015
63 Ga0114129_10007357 3300009147 Bacteria 15676
64 Ga0114129_10567487 3300009147 Bacteria 1474
65 Ga0105243_10031689 3300009148 Bacteria 4077
66 Ga0105241_10120539 3300009174 Bacteria 2112
67 Ga0105242_10074971 3300009176 Bacteria 2816
68 Ga0105242_10384309 3300009176 Bacteria 1306
69 Ga0105248_10541335 3300009177 Bacteria 1313
70 Ga0157380_10155287 3300014326 Bacteria 1983
71 Ga0157379_10028055 3300014968 Bacteria 5010
72 Ga0157379_10044164 3300014968 Bacteria 3978
73 Ga0182006_1005652 3300015261 Bacteria 5926
74 Ga0213872_10002525 3300021361 Bacteria 10669
75 Ga0209784_100002 3300025224 Bacteria 1753105
76 Ga0209566_100003 3300025225 Bacteria 1753105
77 Ga0209674_100004 3300025226 Bacteria 1753105
78 Ga0209563_100006 3300025230 Bacteria 1753105
79 Ga0209677_100003 3300025253 Bacteria 1753105
80 Ga0209565_1013708 3300025263 Bacteria 1890
81 Ga0209675_1004653 3300025291 Bacteria 6033
82 Ga0209025_1037743 3300025294 Bacteria 2137
83 Ga0209050_1000942 3300025298 Bacteria 37933
84 Ga0209050_1006325 3300025298 Bacteria 7051
85 Ga0209256_1000049 3300025299 Bacteria 310696
86 Ga0209051_1000029 3300025303 Bacteria 403675
87 Ga0209257_1000168 3300025304 Bacteria 171312
88 Ga0207643_10014159 3300025908 Bacteria 4330
89 Ga0207684_10069508 3300025910 Bacteria 2993
90 Ga0207654_10054864 3300025911 Bacteria 2304
91 Ga0207707_10422232 3300025912 Bacteria 1143
92 Ga0207671_10007329 3300025914 Bacteria 9577
93 Ga0207660_10024590 3300025917 Bacteria 4079
94 Ga0207657_10021356 3300025919 Bacteria 6096
95 Ga0207652_10041252 3300025921 Bacteria 3923
96 Ga0207681_10109038 3300025923 Bacteria 2011
97 Ga0207686_10024811 3300025934 Bacteria 3479
98 Ga0207709_10049883 3300025935 Bacteria 2557
99 Ga0207704_10035157 3300025938 Bacteria 2868
100 Ga0207689_10034542 3300025942 Bacteria 4200
101 Ga0207708_10070802 3300026075 Bacteria 2670
102 Ga0207708_10209297 3300026075 Bacteria 1558
103 Ga0207702_10036607 3300026078 Bacteria 4106
104 Ga0207676_10095581 3300026095 Bacteria 2451
105 Ga0209281_1000125 3300027111 Bacteria 200371
106 Ga0207428_10037730 3300027907 Bacteria 3930
107 Ga0268264_10237230 3300028381 Bacteria 1687
108 Ga0265313_10029506 3300031595 Bacteria 2836
109 Ga0316575_10001796 3300031665 Bacteria 7032
110 Ga0265342_10000954 3300031712 Bacteria 28791
111 Ga0316577_10019402 3300031733 Bacteria 3762
112 Ga0307409_100062885 3300031995 Bacteria 2908
113 Ga0316583_10008377 3300032133 Bacteria 3730
114 Ga0316593_10000928 3300032168 Bacteria 6016
115 Ga0373947_0151043 3300035725 Bacteria 1496
116 Ga0316582_0004016 3300036647 Bacteria 7353
117 Ga0395900_0157774 3300037418 Bacteria 2317
118 Ga0395898_0028108 3300037466 Bacteria 5639
119 Ga0316581_0006606 3300037588 Bacteria 3077
120 Ga0316581_0012589 3300037588 Bacteria 2383
121 Ga0395901_0002478 3300038443 Bacteria 18730
122 Ga0400490_41627 3300038726 Bacteria 18882
123 Ga0400489_31806 3300039093 Bacteria 3706
124 Ga0436361_0344520 3300039447 Bacteria 1923
125 Ga0436363_0584618 3300039450 Bacteria 6579
126 Ga0450918_000488 3300042531 Bacteria 8486
127 Ga0453684_0009232 3300044712 Bacteria 17322
128 Ga0453684_0078343 3300044712 Bacteria 4136
129 Ga0451576_0000626 3300045051 Bacteria 73620
130 Ga0495603_0040590 3300046455 Bacteria 2785
131 Ga0495629_0005775 3300046459 Bacteria 9228
132 Ga0495651_0114620 3300046462 Bacteria 1988
133 Ga0495662_0000397 3300046476 Bacteria 19466
134 Ga0495594_0206992 3300046499 Bacteria 1118
135 Ga0495586_0140664 3300046535 Bacteria 1354
136 Ga0495633_0018143 3300046558 Bacteria 3579
137 Ga0495659_0010642 3300046664 Bacteria 2958
138 Ga0495588_0010166 3300046674 Bacteria 4365
139 Ga0495669_0030567 3300046684 Bacteria 2364
140 Ga0495613_0019453 3300046689 Bacteria 5060
141 Ga0495680_0125542 3300047322 Bacteria 1890
142 Ga0495593_0115680 3300047673 Bacteria 1367
143 Ga0496106_0263101 3300048909 Bacteria 1380
144 Ga0496114_0006042 3300048917 Bacteria 9530
145 Ga0496114_0109710 3300048917 Bacteria 2363
146 Ga0496114_0120225 3300048917 Bacteria 2259
147 Ga0496124_0104371 3300048927 Bacteria 2292
148 Ga0496126_0364467 3300048929 Bacteria 1179
149 Ga0501033_0103720 3300049570 Bacteria 2074
150 Ga0501034_0307738 3300049571 Bacteria 1520
151 Ga0501036_0172481 3300049572 Bacteria 1822
152 Ga0501042_0109008 3300049578 Bacteria 1993
153 Ga0501047_0046935 3300049581 Bacteria 4173
154 Ga0501047_0166079 3300049581 Bacteria 2078
155 Ga0501048_0250434 3300049582 Bacteria 1257
156 Ga0501070_0045432 3300049586 Bacteria 3653
157 Ga0501072_0057902 3300049588 Bacteria 3054
158 Ga0501075_0061261 3300049591 Bacteria 2835
159 Ga0501076_0107369 3300049592 Bacteria 2254
160 Ga0501076_0236251 3300049592 Bacteria 1494
161 Ga0501080_0014393 3300049742 Bacteria 7285
162 Ga0501080_0060064 3300049742 Bacteria 3538
163 Ga0501080_0189566 3300049742 Bacteria 1890
164 Ga0501083_0001961 3300049744 Bacteria 14138
165 Ga0501035_0052510 3300049822 Bacteria 3647
166 Ga0501044_0110606 3300049823 Bacteria 2756
167 Ga0501044_0116727 3300049823 Bacteria 2674
168 Ga0501045_0146418 3300049824 Bacteria 1757
169 nmdc:mga05p37_13263_c1 3300050507 Bacteria 9866
170 nmdc:mga05p37_352833_c1 3300050507 Bacteria 1731
171 nmdc:mga05p37_4659_c1 3300050507 Bacteria 16026
172 nmdc:mga09592_8049_c1 3300050508 Bacteria 8575
173 nmdc:mga0qj67_101812_c1 3300050509 Bacteria 2316
174 nmdc:mga0qj67_2000_c1 3300050509 Bacteria 11217
175 nmdc:mga0qj67_3287_c1 3300050509 Bacteria 11644
176 nmdc:mga06r32_3235_c1 3300050510 Bacteria 14572
177 nmdc:mga06r32_79290_c1 3300050510 Bacteria 3194
178 nmdc:mga08y16_109143_c1 3300050511 Bacteria 2881
179 nmdc:mga08y16_524035_c1 3300050511 Bacteria 1202
180 nmdc:mga0n895_172622_c1 3300050512 Bacteria 2194
181 nmdc:mga08x19_27297_c1 3300050514 Bacteria 3569
182 nmdc:mga0a205_17813_c2 3300050515 Bacteria 3673
183 nmdc:mga0a205_39967_c1 3300050515 Bacteria 4516
184 Ga0500616_0057075 3300053153 Bacteria 2036
185 Ga0501084_0128740 3300054114 Bacteria 2131
186 Ga0501084_0148444 3300054114 Bacteria 1975

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_352833_c1 nmdc:mga05p37_352833_c1_777_1691 245
2 3300005365 Ga0070688_100134066 Ga0070688_1001340662 263
3 3300005466 Ga0070685_10031173 Ga0070685_100311732 263
4 3300005617 Ga0068859_100257186 Ga0068859_1002571862 263
5 3300006931 Ga0097620_100257178 Ga0097620_1002571782 263
6 3300025923 Ga0207681_10109038 Ga0207681_101090382 263
7 3300046689 Ga0495613_0019453 Ga0495613_0019453_4190_5014 263
8 3300006852 Ga0075433_10005319 Ga0075433_100053195 264
9 3300009147 Ga0114129_10001980 Ga0114129_100019802 264
10 3300046558 Ga0495633_0018143 Ga0495633_0018143_155_1006 264
11 3300046664 Ga0495659_0010642 Ga0495659_0010642_168_1019 264
12 3300046684 Ga0495669_0030567 Ga0495669_0030567_412_1263 264
13 3300050507 nmdc:mga05p37_13263_c1 nmdc:mga05p37_13263_c1_1354_2205 264
14 3300050515 nmdc:mga0a205_17813_c2 nmdc:mga0a205_17813_c2_2182_3033 264
15 3300005444 Ga0070694_100002431 Ga0070694_1000024315 265
16 3300005545 Ga0070695_100000071 Ga0070695_1000000713 265
17 3300005549 Ga0070704_100087537 Ga0070704_1000875372 265
18 3300026075 Ga0207708_10209297 Ga0207708_102092972 268
19 3300005436 Ga0070713_100049507 Ga0070713_1000495073 272
20 3300048927 Ga0496124_0104371 Ga0496124_0104371_1435_2271 278
21 3300046455 Ga0495603_0040590 Ga0495603_0040590_1042_1938 279
22 3300046499 Ga0495594_0206992 Ga0495594_0206992_185_1081 279
23 3300046674 Ga0495588_0010166 Ga0495588_0010166_2678_3574 279
24 3300048929 Ga0496126_0364467 Ga0496126_0364467_257_1144 280
25 3300006880 Ga0075429_100125775 Ga0075429_1001257751 281
26 3300037588 Ga0316581_0012589 Ga0316581_0012589_726_1760 293
27 3300035725 Ga0373947_0151043 Ga0373947_0151043_566_1486 294
28 3300042531 Ga0450918_000488 Ga0450918_000488_3249_4223 297
29 3300005336 Ga0070680_100302206 Ga0070680_1003022061 300
30 3300005549 Ga0070704_100245440 Ga0070704_1002454401 300
31 3300009147 Ga0114129_10567487 Ga0114129_105674871 300
32 iso_pu_bacteria 2643221644 2644243474 303
33 3300005518 Ga0070699_100170393 Ga0070699_1001703931 305
34 3300003775 Ga0055524_1000326 Ga0055524_100032621 306
35 3300003791 Ga0055530_10001326 Ga0055530_100013263 306
36 3300003791 Ga0055530_10001465 Ga0055530_100014656 306
37 3300003792 Ga0055540_1000073 Ga0055540_100007384 306
38 3300003794 Ga0055531_10002033 Ga0055531_100020333 306
39 3300006946 Ga0079104_1000056 Ga0079104_100005617 306
40 3300009094 Ga0111539_10268803 Ga0111539_102688032 306
41 3300025263 Ga0209565_1013708 Ga0209565_10137083 306
42 3300025291 Ga0209675_1004653 Ga0209675_10046534 306
43 3300025298 Ga0209050_1000942 Ga0209050_100094215 306
44 3300025298 Ga0209050_1006325 Ga0209050_10063255 306
45 3300025299 Ga0209256_1000049 Ga0209256_1000049135 306
46 3300025303 Ga0209051_1000029 Ga0209051_1000029337 306
47 3300025304 Ga0209257_1000168 Ga0209257_1000168133 306
48 3300027111 Ga0209281_1000125 Ga0209281_100012525 306
49 3300031733 Ga0316577_10019402 Ga0316577_100194022 306
50 3300032168 Ga0316593_10000928 Ga0316593_100009282 306
51 3300036647 Ga0316582_0004016 Ga0316582_0004016_5717_6787 306
52 3300037588 Ga0316581_0006606 Ga0316581_0006606_369_1439 306
53 3300048917 Ga0496114_0006042 Ga0496114_0006042_6616_7596 306
54 3300031665 Ga0316575_10001796 Ga0316575_100017968 307
55 3300032133 Ga0316583_10008377 Ga0316583_100083772 307
56 3300009094 Ga0111539_10033680 Ga0111539_100336804 308
57 3300027907 Ga0207428_10037730 Ga0207428_100377304 308
58 3300005458 Ga0070681_10008917 Ga0070681_100089172 309
59 3300050511 nmdc:mga08y16_524035_c1 nmdc:mga08y16_524035_c1_49_1014 309
60 iso_pu_bacteria 3006973921 3006975504 309
61 3300006871 Ga0075434_100116878 Ga0075434_1001168782 310
62 3300007076 Ga0075435_100151647 Ga0075435_1001516472 310
63 3300050512 nmdc:mga0n895_172622_c1 nmdc:mga0n895_172622_c1_511_1659 310
64 iso_pu_bacteria 2881644220 2881646478 310
65 iso_pu_bacteria 3001267043 3001267912 310
66 iso_pu_bacteria 3001272096 3001273428 310
67 iso_pu_bacteria 3006988479 3006989400 310
68 iso_pu_bacteria 8057977335 8057981813 310
69 3300005445 Ga0070708_100117157 Ga0070708_1001171573 311
70 3300009177 Ga0105248_10541335 Ga0105248_105413351 311
71 3300049570 Ga0501033_0103720 Ga0501033_0103720_757_1719 311
72 3300049586 Ga0501070_0045432 Ga0501070_0045432_687_1649 311
73 3300049822 Ga0501035_0052510 Ga0501035_0052510_508_1470 311
74 3300049823 Ga0501044_0110606 Ga0501044_0110606_1077_2039 311
75 3300050514 nmdc:mga08x19_27297_c1 nmdc:mga08x19_27297_c1_2564_3526 311
76 iso_pu_bacteria 2711768088 2712198631 311
77 iso_pu_bacteria 2744054657 2745169428 311
78 iso_pu_bacteria 2816332336 2817620234 311
79 iso_pu_bacteria 2898907183 2898908897 311
80 iso_pu_bacteria 2904606771 2904608247 311
81 iso_pu_bacteria 2996336353 2996340747 311
82 3300014326 Ga0157380_10155287 Ga0157380_101552872 312
83 3300031995 Ga0307409_100062885 Ga0307409_1000628852 312
84 3300039450 Ga0436363_0584618 Ga0436363_0584618_4719_5708 312
85 iso_pu_bacteria 2818991459 2819670784 312
86 iso_pu_bacteria 2888578766 2888580086 312
87 iso_pu_bacteria 2889049205 2889051295 312
88 iso_pu_bacteria 2919425241 2919429121 312
89 3300046459 Ga0495629_0005775 Ga0495629_0005775_3360_4385 313
90 3300047673 Ga0495593_0115680 Ga0495593_0115680_30_1055 313
91 3300050511 nmdc:mga08y16_109143_c1 nmdc:mga08y16_109143_c1_1035_2102 313
92 3300053153 Ga0500616_0057075 Ga0500616_0057075_417_1427 313
93 iso_pu_bacteria 2551306416 2553002924 313
94 iso_pu_bacteria 2904530477 2904531627 313
95 iso_pu_bacteria 2904584206 2904586733 313
96 iso_pu_bacteria 2904589729 2904593234 313
97 iso_pu_bacteria 2904601388 2904602922 313
98 iso_pu_bacteria 2919079590 2919084057 313
99 iso_pu_bacteria 2923510766 2923511021 313
100 iso_pu_bacteria 2928510474 2928511269 313
101 3300005530 Ga0070679_100027098 Ga0070679_1000270984 314
102 3300006844 Ga0075428_100004687 Ga0075428_1000046876 314
103 3300006846 Ga0075430_100002830 Ga0075430_10000283010 314
104 3300006846 Ga0075430_100004508 Ga0075430_1000045086 314
105 3300006847 Ga0075431_100003412 Ga0075431_1000034126 314
106 3300006871 Ga0075434_100139233 Ga0075434_1001392332 314
107 3300006880 Ga0075429_100004219 Ga0075429_1000042194 314
108 3300007076 Ga0075435_100357306 Ga0075435_1003573062 314
109 3300009147 Ga0114129_10007357 Ga0114129_100073575 314
110 3300025294 Ga0209025_1037743 Ga0209025_10377432 314
111 3300025921 Ga0207652_10041252 Ga0207652_100412524 314
112 3300044712 Ga0453684_0078343 Ga0453684_0078343_2056_3057 314
113 3300045051 Ga0451576_0000626 Ga0451576_0000626_31240_32241 314
114 3300048909 Ga0496106_0263101 Ga0496106_0263101_31_1140 314
115 3300048917 Ga0496114_0120225 Ga0496114_0120225_298_1299 314
116 3300050507 nmdc:mga05p37_4659_c1 nmdc:mga05p37_4659_c1_5881_7041 314
117 3300050508 nmdc:mga09592_8049_c1 nmdc:mga09592_8049_c1_4194_5354 314
118 3300050509 nmdc:mga0qj67_2000_c1 nmdc:mga0qj67_2000_c1_6252_7421 314
119 3300050509 nmdc:mga0qj67_3287_c1 nmdc:mga0qj67_3287_c1_5143_6303 314
120 3300050510 nmdc:mga06r32_3235_c1 nmdc:mga06r32_3235_c1_5460_6620 314
121 3300050510 nmdc:mga06r32_79290_c1 nmdc:mga06r32_79290_c1_36_1205 314
122 3300050515 nmdc:mga0a205_39967_c1 nmdc:mga0a205_39967_c1_3244_4323 314
123 3300005339 Ga0070660_100046336 Ga0070660_1000463363 315
124 3300005365 Ga0070688_100153711 Ga0070688_1001537112 315
125 3300005441 Ga0070700_100104721 Ga0070700_1001047211 315
126 3300005458 Ga0070681_10296525 Ga0070681_102965252 315
127 3300005546 Ga0070696_100039536 Ga0070696_1000395363 315
128 3300005563 Ga0068855_100070423 Ga0068855_1000704235 315
129 3300005614 Ga0068856_100292501 Ga0068856_1002925012 315
130 3300009176 Ga0105242_10384309 Ga0105242_103843092 315
131 3300014968 Ga0157379_10044164 Ga0157379_100441642 315
132 3300025912 Ga0207707_10422232 Ga0207707_104222321 315
133 3300025919 Ga0207657_10021356 Ga0207657_100213562 315
134 3300026075 Ga0207708_10070802 Ga0207708_100708022 315
135 3300026078 Ga0207702_10036607 Ga0207702_100366073 315
136 3300026095 Ga0207676_10095581 Ga0207676_100955812 315
137 3300031595 Ga0265313_10029506 Ga0265313_100295063 315
138 3300031712 Ga0265342_10000954 Ga0265342_1000095419 315
139 3300038726 Ga0400490_41627 Ga0400490_41627_7387_8358 315
140 3300039093 Ga0400489_31806 Ga0400489_31806_860_1831 315
141 3300049571 Ga0501034_0307738 Ga0501034_0307738_409_1446 315
142 3300049572 Ga0501036_0172481 Ga0501036_0172481_414_1484 315
143 3300049581 Ga0501047_0046935 Ga0501047_0046935_563_1600 315
144 3300049581 Ga0501047_0166079 Ga0501047_0166079_290_1333 315
145 3300049742 Ga0501080_0014393 Ga0501080_0014393_1895_2956 315
146 3300049742 Ga0501080_0189566 Ga0501080_0189566_370_1407 315
147 3300049744 Ga0501083_0001961 Ga0501083_0001961_2794_3858 315
148 3300049823 Ga0501044_0116727 Ga0501044_0116727_1272_2309 315
149 3300049824 Ga0501045_0146418 Ga0501045_0146418_386_1456 315
150 3300054114 Ga0501084_0128740 Ga0501084_0128740_300_1364 315
151 3300005536 Ga0070697_100190906 Ga0070697_1001909062 316
152 3300005546 Ga0070696_100213041 Ga0070696_1002130411 316
153 3300005618 Ga0068864_100015650 Ga0068864_1000156503 316
154 3300005937 Ga0081455_10003971 Ga0081455_100039714 316
155 3300005981 Ga0081538_10000183 Ga0081538_1000018350 316
156 3300014968 Ga0157379_10028055 Ga0157379_100280554 316
157 3300025910 Ga0207684_10069508 Ga0207684_100695082 316
158 3300025938 Ga0207704_10035157 Ga0207704_100351573 316
159 3300037466 Ga0395898_0028108 Ga0395898_0028108_3089_4111 316
160 3300038443 Ga0395901_0002478 Ga0395901_0002478_8040_9062 316
161 3300044712 Ga0453684_0009232 Ga0453684_0009232_6997_8040 316
162 3300046462 Ga0495651_0114620 Ga0495651_0114620_881_1960 316
163 3300046535 Ga0495586_0140664 Ga0495586_0140664_32_1051 316
164 3300047322 Ga0495680_0125542 Ga0495680_0125542_628_1707 316
165 3300048917 Ga0496114_0109710 Ga0496114_0109710_231_1367 316
166 3300049578 Ga0501042_0109008 Ga0501042_0109008_457_1467 316
167 3300049582 Ga0501048_0250434 Ga0501048_0250434_106_1116 316
168 3300049588 Ga0501072_0057902 Ga0501072_0057902_573_1583 316
169 3300049591 Ga0501075_0061261 Ga0501075_0061261_273_1283 316
170 3300049592 Ga0501076_0107369 Ga0501076_0107369_822_1832 316
171 3300049592 Ga0501076_0236251 Ga0501076_0236251_448_1458 316
172 3300049742 Ga0501080_0060064 Ga0501080_0060064_1913_2923 316
173 3300054114 Ga0501084_0148444 Ga0501084_0148444_699_1709 316
174 iso_pu_bacteria 2821111986 2821113176 316
175 iso_pu_bacteria 2925326138 2925330820 316
176 iso_pu_bacteria 2925326138 2925334353 316
177 3300003751 Ga0055538_1000002 Ga0055538_1000002858 317
178 3300003752 Ga0055539_1000002 Ga0055539_1000002858 317
179 3300003756 Ga0055533_1000004 Ga0055533_1000004858 317
180 3300003759 Ga0055525_1000002 Ga0055525_1000002858 317
181 3300003841 Ga0055541_1000043 Ga0055541_100004371 317
182 3300005328 Ga0070676_10080558 Ga0070676_100805582 317
183 3300005334 Ga0068869_100023659 Ga0068869_1000236592 317
184 3300005341 Ga0070691_10047411 Ga0070691_100474112 317
185 3300005438 Ga0070701_10011779 Ga0070701_100117792 317
186 3300005444 Ga0070694_100065610 Ga0070694_1000656102 317
187 3300005545 Ga0070695_100019867 Ga0070695_1000198674 317
188 3300005546 Ga0070696_100040734 Ga0070696_1000407343 317
189 3300005577 Ga0068857_100144663 Ga0068857_1001446632 317
190 3300005840 Ga0068870_10028252 Ga0068870_100282522 317
191 3300005843 Ga0068860_100236876 Ga0068860_1002368762 317
192 3300009093 Ga0105240_10080093 Ga0105240_100800933 317
193 3300009148 Ga0105243_10031689 Ga0105243_100316892 317
194 3300009174 Ga0105241_10120539 Ga0105241_101205392 317
195 3300009176 Ga0105242_10074971 Ga0105242_100749712 317
196 3300015261 Ga0182006_1005652 Ga0182006_10056525 317
197 3300021361 Ga0213872_10002525 Ga0213872_100025252 317
198 3300025224 Ga0209784_100002 Ga0209784_1000021077 317
199 3300025225 Ga0209566_100003 Ga0209566_1000031077 317
200 3300025226 Ga0209674_100004 Ga0209674_1000041077 317
201 3300025230 Ga0209563_100006 Ga0209563_1000061077 317
202 3300025253 Ga0209677_100003 Ga0209677_1000031077 317
203 3300025908 Ga0207643_10014159 Ga0207643_100141593 317
204 3300025911 Ga0207654_10054864 Ga0207654_100548642 317
205 3300025914 Ga0207671_10007329 Ga0207671_100073292 317
206 3300025917 Ga0207660_10024590 Ga0207660_100245903 317
207 3300025934 Ga0207686_10024811 Ga0207686_100248113 317
208 3300025935 Ga0207709_10049883 Ga0207709_100498832 317
209 3300025942 Ga0207689_10034542 Ga0207689_100345422 317
210 3300028381 Ga0268264_10237230 Ga0268264_102372302 317
211 3300037418 Ga0395900_0157774 Ga0395900_0157774_260_1309 317
212 3300039447 Ga0436361_0344520 Ga0436361_0344520_520_1473 317
213 3300046476 Ga0495662_0000397 Ga0495662_0000397_9614_10651 317
214 3300050509 nmdc:mga0qj67_101812_c1 nmdc:mga0qj67_101812_c1_80_1144 317

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

288

353

0.99

PF00005

ABC_tran

ABC transporter

80

237

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9502 5 235
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9481 8 251
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9442 8 253
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9431 8 253
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.9414 8 251
ID Description Score Start End Superfamily
af_P37313_10_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9799 5 315 3.40.50.300
af_Q2FZR0_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9794 5 314 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9749 5 315 3.40.50.300
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9744 7 255 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.973 5 252 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2E9K0B0-F1-model_v4 Oligopeptide ABC transporter ATP-binding protein OppF 0.9779 3 210 GO:0005524
GO:0016887
GO:0055085
AF-A0A3N5YXA0-F1-model_v4 Glutathione import ATP-binding protein GsiA (EC 7.4.2.10) 0.9756 6 206 GO:0005524
GO:0016887
GO:0055085
AF-A0A558CA88-F1-model_v4 ATP-binding cassette domain-containing protein 0.9708 1 145 GO:0005524
GO:0016887
AF-A0A0M8U813-F1-model_v4 deleted 0.9676 3 202
AF-W7D177-F1-model_v4 deleted 0.9636 5 234

Feature Viewer

pLDDT pTM Quality
92.49 0.91 High
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Predicted Structure (AlphaFold2)

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