F325712

General Info

Members Datasets Scaffolds Average Seq Length
214 177 428 322

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0028326|Ga0501040_0028326_1452_2522
Length 356
Sequence LHGFQELIDSTGNIELPVDRQRQGFCAREVVLSMGKTTHSKIVIVGSGPAGYTAAIYAARAMLDPILIEGIQPGGQLTITTDVENYPGFADVIQGPWLMEQMRKQAEQVGTKLVFDHVSKADLARRPFRLKCESGDRYLAEALVIATGAQARWLELPSEQKFKGYGVSACATCDGFFYRGKQVMVIGGGNTAVEEALFLTNFASRVTIVHRRDSFRAEKILQERLFKNPKIAVLWDTVLEQVKGEESPPKVNAVVLRNVKTNALTEVPADGVFIAIGHTPASELFVGQLEMKHGGYITTAPFSTATSRPGVFAAGDVTDDVYRQAVTAAGLGCMAALEAERFLAIQGAAEPAVAAE

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
31 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
42 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
49 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
50 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
51 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
52 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
53 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
54 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
55 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
56 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
57 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
74 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
163 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
164 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
172 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
173 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
174 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
175 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
176 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
177 2909042592 Labrys sp. LIt4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.73
Metatranscriptomes 0
Isolates 3.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.48
Nodule 1.87
Rhizoplane 6.54
Rhizosphere 79.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0028326 3300049576 Bacteria 3776
2 JGI25404J52841_10001276 3300003659 Bacteria 4370
3 Ga0065165_1014866 3300005262 Bacteria 3000
4 Ga0070670_100018919 3300005331 Bacteria 5907
5 Ga0070689_100167714 3300005340 Bacteria 1778
6 Ga0070675_100085273 3300005354 Bacteria 2639
7 Ga0070671_100030810 3300005355 Bacteria 4427
8 Ga0070673_100030467 3300005364 Bacteria 4038
9 Ga0070709_10033763 3300005434 Bacteria 3096
10 Ga0070714_100032982 3300005435 Bacteria 4326
11 Ga0070713_100003311 3300005436 Bacteria 10627
12 Ga0070710_10007307 3300005437 Bacteria 5343
13 Ga0070679_100174991 3300005530 Bacteria 2119
14 Ga0081540_1000282 3300005983 Bacteria 52922
15 Ga0070717_10034964 3300006028 Bacteria 4064
16 Ga0070715_10072615 3300006163 Bacteria 1541
17 Ga0070716_100018297 3300006173 Bacteria 3648
18 Ga0070712_100047943 3300006175 Bacteria 2959
19 Ga0075430_100036629 3300006846 Bacteria 4160
20 Ga0075431_100031691 3300006847 Bacteria 5445
21 Ga0075434_100035960 3300006871 Bacteria 4898
22 Ga0075436_100158519 3300006914 Bacteria 1595
23 Ga0075435_100129379 3300007076 Bacteria 2112
24 Ga0099795_10015862 3300007788 Bacteria 2370
25 Ga0105240_10137627 3300009093 Bacteria 2923
26 Ga0111539_10025696 3300009094 Bacteria 7216
27 Ga0099796_10000582 3300010159 Bacteria 6309
28 Ga0105246_10037471 3300011119 Bacteria 3255
29 Ga0213872_10000984 3300021361 Bacteria 19922
30 Ga0209026_1000617 3300025250 Bacteria 22565
31 Ga0209257_1001207 3300025304 Bacteria 32467
32 Ga0207692_10001791 3300025898 Bacteria 8146
33 Ga0207699_10007144 3300025906 Bacteria 5447
34 Ga0207693_10002561 3300025915 Bacteria 15808
35 Ga0207663_10007287 3300025916 Bacteria 5725
36 Ga0207650_10038823 3300025925 Bacteria 3479
37 Ga0207644_10079718 3300025931 Bacteria 2416
38 Ga0207665_10061860 3300025939 Bacteria 2539
39 Ga0207651_10116852 3300025960 Bacteria 2014
40 Ga0209179_1006781 3300027512 Bacteria 1863
41 Ga0265339_10108275 3300031249 Bacteria 1441
42 Ga0265331_10101202 3300031250 Bacteria 1326
43 Ga0265316_10154406 3300031344 Bacteria 1718
44 Ga0265313_10055442 3300031595 Bacteria 1877
45 Ga0307508_10000029 3300031616 Bacteria 168411
46 Ga0316578_10063800 3300031728 Bacteria 2173
47 Ga0307414_10159080 3300032004 Bacteria 1792
48 Ga0307414_10343568 3300032004 Bacteria 1278
49 Ga0316583_10016173 3300032133 Bacteria 2685
50 Ga0315911_1000012 3300033442 Bacteria 248988
51 Ga0373926_0033806 3300035083 Bacteria 1809
52 Ga0373936_0000103 3300035113 Bacteria 30865
53 Ga0373945_0001598 3300035116 Bacteria 6940
54 Ga0373953_0010955 3300035117 Bacteria 3169
55 Ga0373954_0002541 3300035118 Bacteria 7653
56 Ga0373943_0003324 3300035170 Bacteria 7309
57 Ga0373946_0002679 3300035171 Bacteria 6292
58 Ga0373946_0005880 3300035171 Bacteria 4443
59 Ga0373955_0000219 3300035172 Bacteria 24074
60 Ga0373935_0000017 3300035692 Bacteria 70368
61 Ga0373935_0077655 3300035692 Bacteria 2152
62 Ga0373927_0010651 3300035695 Bacteria 6125
63 Ga0373927_0085204 3300035695 Bacteria 2050
64 Ga0373933_0010548 3300035724 Bacteria 5066
65 Ga0373947_0001696 3300035725 Bacteria 13506
66 Ga0373947_0013503 3300035725 Bacteria 4678
67 Ga0373937_0000103 3300036401 Bacteria 80386
68 Ga0373925_0000058 3300037068 Bacteria 122682
69 Ga0373925_0115466 3300037068 Bacteria 2078
70 Ga0316581_0017981 3300037588 Bacteria 2047
71 Ga0436364_0537565 3300037853 Bacteria 4128
72 Ga0436365_0667042 3300039437 Bacteria 1127
73 Ga0436365_0992208 3300039437 Bacteria 2268
74 Ga0436365_1789540 3300039437 Bacteria 2016
75 Ga0436362_1137549 3300039453 Bacteria 3379
76 Ga0453684_0515384 3300044712 Bacteria 1322
77 Ga0451576_0013975 3300045051 Bacteria 8953
78 Ga0495592_0000343 3300046454 Bacteria 38047
79 Ga0495629_0006160 3300046459 Bacteria 8906
80 Ga0495651_0001377 3300046462 Bacteria 18851
81 Ga0495653_0000072 3300046463 Bacteria 85266
82 Ga0495580_0100233 3300046472 Bacteria 2015
83 Ga0495580_0113197 3300046472 Bacteria 1885
84 Ga0495664_0000009 3300046477 Bacteria 289534
85 Ga0495608_0001132 3300046511 Bacteria 18864
86 Ga0495618_0000061 3300046514 Bacteria 78337
87 Ga0495628_0000012 3300046516 Bacteria 224162
88 Ga0495630_0011956 3300046517 Bacteria 6294
89 Ga0495644_0022565 3300046523 Bacteria 2399
90 Ga0495652_0000021 3300046529 Bacteria 181454
91 Ga0495640_0000028 3300046533 Bacteria 79904
92 Ga0495587_0000033 3300046536 Bacteria 123885
93 Ga0495645_0000017 3300046543 Bacteria 156865
94 Ga0495633_0047576 3300046558 Bacteria 2027
95 Ga0495667_0000011 3300046559 Bacteria 222545
96 Ga0495634_0000220 3300046642 Bacteria 53609
97 Ga0495635_0000019 3300046663 Bacteria 193402
98 Ga0495588_0012304 3300046674 Bacteria 4040
99 Ga0495657_0000378 3300046675 Bacteria 41496
100 Ga0495599_0000024 3300046678 Bacteria 121388
101 Ga0495623_0000022 3300046679 Bacteria 98899
102 Ga0495646_0000033 3300046680 Bacteria 83930
103 Ga0495658_0026256 3300046683 Bacteria 3119
104 Ga0495658_0274668 3300046683 Bacteria 1063
105 Ga0495613_0008574 3300046689 Bacteria 7587
106 Ga0495624_0021695 3300046690 Bacteria 4256
107 Ga0495600_0000028 3300046809 Bacteria 90661
108 Ga0495581_0227034 3300047315 Bacteria 1092
109 Ga0495604_0000011 3300047317 Bacteria 292024
110 Ga0495674_0000015 3300047319 Bacteria 224071
111 Ga0495676_0111055 3300047321 Bacteria 2011
112 Ga0495680_0002528 3300047322 Bacteria 18706
113 Ga0495675_0000295 3300047444 Bacteria 35782
114 Ga0495684_0000036 3300047471 Bacteria 107181
115 Ga0495602_0000018 3300048088 Bacteria 183837
116 Ga0496101_0158130 3300048904 Bacteria 1737
117 Ga0496102_0207036 3300048905 Bacteria 1849
118 Ga0496105_0003055 3300048908 Bacteria 12300
119 Ga0496105_0059738 3300048908 Bacteria 3146
120 Ga0496108_0015725 3300048911 Bacteria 6171
121 Ga0496108_0237089 3300048911 Bacteria 1587
122 Ga0496109_0068119 3300048912 Bacteria 3262
123 Ga0496109_0506840 3300048912 Bacteria 1139
124 Ga0496110_0001935 3300048913 Bacteria 15344
125 Ga0496111_0019565 3300048914 Bacteria 4706
126 Ga0496111_0093467 3300048914 Bacteria 2205
127 Ga0496112_0228738 3300048915 Bacteria 1814
128 Ga0496112_0232247 3300048915 Bacteria 1799
129 Ga0496113_0001849 3300048916 Bacteria 12052
130 Ga0496126_0079053 3300048929 Bacteria 2913
131 Ga0501032_0000280 3300049569 Bacteria 43114
132 Ga0501032_0063455 3300049569 Bacteria 2473
133 Ga0501033_0034434 3300049570 Bacteria 3799
134 Ga0501033_0137350 3300049570 Bacteria 1769
135 Ga0501034_0000001 3300049571 Bacteria 2184493
136 Ga0501034_0207568 3300049571 Bacteria 1915
137 Ga0501036_0005647 3300049572 Bacteria 10148
138 Ga0501036_0016318 3300049572 Bacteria 6205
139 Ga0501036_0117283 3300049572 Bacteria 2248
140 Ga0501037_0079643 3300049573 Bacteria 2378
141 Ga0501037_0137944 3300049573 Bacteria 1746
142 Ga0501038_0004466 3300049574 Bacteria 13003
143 Ga0501039_0000194 3300049575 Bacteria 43823
144 Ga0501040_0004137 3300049576 Bacteria 9440
145 Ga0501040_0106254 3300049576 Bacteria 1962
146 Ga0501040_0337069 3300049576 Bacteria 1080
147 Ga0501041_0033703 3300049577 Bacteria 3099
148 Ga0501042_0058784 3300049578 Bacteria 2745
149 Ga0501046_0035318 3300049580 Bacteria 4029
150 Ga0501047_0186012 3300049581 Bacteria 1942
151 Ga0501048_0051898 3300049582 Bacteria 2918
152 Ga0501067_0023954 3300049583 Bacteria 3385
153 Ga0501070_0308895 3300049586 Bacteria 1287
154 Ga0501071_0130558 3300049587 Bacteria 1866
155 Ga0501072_0059131 3300049588 Bacteria 3022
156 Ga0501072_0156322 3300049588 Bacteria 1818
157 Ga0501073_0104463 3300049589 Bacteria 1966
158 Ga0501073_0153045 3300049589 Bacteria 1598
159 Ga0501074_0123064 3300049590 Bacteria 1855
160 Ga0501075_0036836 3300049591 Bacteria 3651
161 Ga0501076_0003551 3300049592 Bacteria 10956
162 Ga0501077_0008970 3300049593 Bacteria 6203
163 Ga0501077_0010209 3300049593 Bacteria 5847
164 Ga0501077_0156651 3300049593 Bacteria 1446
165 Ga0501257_028102 3300049686 Bacteria 1348
166 Ga0501079_0069609 3300049741 Bacteria 2716
167 Ga0501080_0063478 3300049742 Bacteria 3438
168 Ga0501080_0226266 3300049742 Bacteria 1710
169 Ga0501081_0003865 3300049743 Bacteria 9598
170 Ga0501035_0048586 3300049822 Bacteria 3805
171 Ga0501035_0235664 3300049822 Bacteria 1559
172 Ga0501044_0008734 3300049823 Bacteria 11091
173 Ga0501045_0012149 3300049824 Bacteria 6062
174 Ga0501045_0169596 3300049824 Bacteria 1626
175 nmdc:mga03n38_33924_c1 3300050490 Bacteria 2176
176 nmdc:mga06z11_83240_c1 3300050494 Bacteria 1722
177 nmdc:mga05p37_549699_c1 3300050507 Bacteria 1314
178 nmdc:mga09592_59689_c1 3300050508 Bacteria 3224
179 nmdc:mga06r32_409652_c1 3300050510 Bacteria 1337
180 nmdc:mga08y16_218585_c1 3300050511 Bacteria 1973
181 nmdc:mga08y16_22945_c1 3300050511 Bacteria 6588
182 nmdc:mga0n895_33234_c1 3300050512 Bacteria 4956
183 nmdc:mga0rr50_425756_c1 3300050513 Bacteria 1123
184 nmdc:mga08x19_132724_c1 3300050514 Bacteria 1676
185 Ga0495601_0000024 3300053077 Bacteria 133160
186 Ga0495612_0000216 3300053078 Bacteria 24417
187 Ga0495595_0000036 3300053084 Bacteria 79035
188 Ga0495619_0000034 3300053085 Bacteria 129851
189 Ga0500643_001572 3300053087 Bacteria 12913
190 Ga0500644_0000893 3300053088 Bacteria 9625
191 Ga0500651_0005989 3300053093 Bacteria 6980
192 Ga0500651_0263558 3300053093 Bacteria 998
193 Ga0500593_026738 3300053117 Bacteria 2572
194 Ga0500595_000001 3300053119 Bacteria 1088438
195 Ga0500642_0056021 3300053130 Bacteria 1755
196 Ga0500652_035140 3300053131 Bacteria 1989
197 Ga0500658_0047585 3300053134 Bacteria 1741
198 Ga0500568_0008623 3300053139 Bacteria 4897
199 Ga0500616_0000001 3300053153 Bacteria 1986011
200 Ga0500645_000258 3300053730 Bacteria 38707
201 Ga0501084_0012063 3300054114 Bacteria 7157
202 Ga0501084_0031599 3300054114 Bacteria 4425
203 Ga0501084_0090908 3300054114 Bacteria 2563
204 Ga0501084_0250899 3300054114 Bacteria 1494
205 Ga0501082_0004991 3300060353 Bacteria 11586
206 Ga0501082_0057990 3300060353 Bacteria 3335
207 Ga0530510_0036228 3300061734 Bacteria 3556
208 2513863819 2513237137 Bacteria 9558895
209 2517890141 2517572143 Bacteria 9484767
210 2745077295 2744054633 Bacteria 8678936
211 2891088728 2891088606 Bacteria 4762464
212 2906640307 2906635258 Bacteria 8601019
213 2906663635 2906660503 Bacteria 8595048
214 2909047058 2909042592 Bacteria 6499737
215 Ga0501040_0028326
216 JGI25404J52841_10001276
217 Ga0065165_1014866
218 Ga0070670_100018919
219 Ga0070689_100167714
220 Ga0070675_100085273
221 Ga0070671_100030810
222 Ga0070673_100030467
223 Ga0070709_10033763
224 Ga0070714_100032982
225 Ga0070713_100003311
226 Ga0070710_10007307
227 Ga0070679_100174991
228 Ga0081540_1000282
229 Ga0070717_10034964
230 Ga0070715_10072615
231 Ga0070716_100018297
232 Ga0070712_100047943
233 Ga0075430_100036629
234 Ga0075431_100031691
235 Ga0075434_100035960
236 Ga0075436_100158519
237 Ga0075435_100129379
238 Ga0099795_10015862
239 Ga0105240_10137627
240 Ga0111539_10025696
241 Ga0099796_10000582
242 Ga0105246_10037471
243 Ga0213872_10000984
244 Ga0209026_1000617
245 Ga0209257_1001207
246 Ga0207692_10001791
247 Ga0207699_10007144
248 Ga0207693_10002561
249 Ga0207663_10007287
250 Ga0207650_10038823
251 Ga0207644_10079718
252 Ga0207665_10061860
253 Ga0207651_10116852
254 Ga0209179_1006781
255 Ga0265339_10108275
256 Ga0265331_10101202
257 Ga0265316_10154406
258 Ga0265313_10055442
259 Ga0307508_10000029
260 Ga0316578_10063800
261 Ga0307414_10159080
262 Ga0307414_10343568
263 Ga0316583_10016173
264 Ga0315911_1000012
265 Ga0373926_0033806
266 Ga0373936_0000103
267 Ga0373945_0001598
268 Ga0373953_0010955
269 Ga0373954_0002541
270 Ga0373943_0003324
271 Ga0373946_0002679
272 Ga0373946_0005880
273 Ga0373955_0000219
274 Ga0373935_0000017
275 Ga0373935_0077655
276 Ga0373927_0010651
277 Ga0373927_0085204
278 Ga0373933_0010548
279 Ga0373947_0001696
280 Ga0373947_0013503
281 Ga0373937_0000103
282 Ga0373925_0000058
283 Ga0373925_0115466
284 Ga0316581_0017981
285 Ga0436364_0537565
286 Ga0436365_0667042
287 Ga0436365_0992208
288 Ga0436365_1789540
289 Ga0436362_1137549
290 Ga0453684_0515384
291 Ga0451576_0013975
292 Ga0495592_0000343
293 Ga0495629_0006160
294 Ga0495651_0001377
295 Ga0495653_0000072
296 Ga0495580_0100233
297 Ga0495580_0113197
298 Ga0495664_0000009
299 Ga0495608_0001132
300 Ga0495618_0000061
301 Ga0495628_0000012
302 Ga0495630_0011956
303 Ga0495644_0022565
304 Ga0495652_0000021
305 Ga0495640_0000028
306 Ga0495587_0000033
307 Ga0495645_0000017
308 Ga0495633_0047576
309 Ga0495667_0000011
310 Ga0495634_0000220
311 Ga0495635_0000019
312 Ga0495588_0012304
313 Ga0495657_0000378
314 Ga0495599_0000024
315 Ga0495623_0000022
316 Ga0495646_0000033
317 Ga0495658_0026256
318 Ga0495658_0274668
319 Ga0495613_0008574
320 Ga0495624_0021695
321 Ga0495600_0000028
322 Ga0495581_0227034
323 Ga0495604_0000011
324 Ga0495674_0000015
325 Ga0495676_0111055
326 Ga0495680_0002528
327 Ga0495675_0000295
328 Ga0495684_0000036
329 Ga0495602_0000018
330 Ga0496101_0158130
331 Ga0496102_0207036
332 Ga0496105_0003055
333 Ga0496105_0059738
334 Ga0496108_0015725
335 Ga0496108_0237089
336 Ga0496109_0068119
337 Ga0496109_0506840
338 Ga0496110_0001935
339 Ga0496111_0019565
340 Ga0496111_0093467
341 Ga0496112_0228738
342 Ga0496112_0232247
343 Ga0496113_0001849
344 Ga0496126_0079053
345 Ga0501032_0000280
346 Ga0501032_0063455
347 Ga0501033_0034434
348 Ga0501033_0137350
349 Ga0501034_0000001
350 Ga0501034_0207568
351 Ga0501036_0005647
352 Ga0501036_0016318
353 Ga0501036_0117283
354 Ga0501037_0079643
355 Ga0501037_0137944
356 Ga0501038_0004466
357 Ga0501039_0000194
358 Ga0501040_0004137
359 Ga0501040_0106254
360 Ga0501040_0337069
361 Ga0501041_0033703
362 Ga0501042_0058784
363 Ga0501046_0035318
364 Ga0501047_0186012
365 Ga0501048_0051898
366 Ga0501067_0023954
367 Ga0501070_0308895
368 Ga0501071_0130558
369 Ga0501072_0059131
370 Ga0501072_0156322
371 Ga0501073_0104463
372 Ga0501073_0153045
373 Ga0501074_0123064
374 Ga0501075_0036836
375 Ga0501076_0003551
376 Ga0501077_0008970
377 Ga0501077_0010209
378 Ga0501077_0156651
379 Ga0501257_028102
380 Ga0501079_0069609
381 Ga0501080_0063478
382 Ga0501080_0226266
383 Ga0501081_0003865
384 Ga0501035_0048586
385 Ga0501035_0235664
386 Ga0501044_0008734
387 Ga0501045_0012149
388 Ga0501045_0169596
389 nmdc:mga03n38_33924_c1
390 nmdc:mga06z11_83240_c1
391 nmdc:mga05p37_549699_c1
392 nmdc:mga09592_59689_c1
393 nmdc:mga06r32_409652_c1
394 nmdc:mga08y16_218585_c1
395 nmdc:mga08y16_22945_c1
396 nmdc:mga0n895_33234_c1
397 nmdc:mga0rr50_425756_c1
398 nmdc:mga08x19_132724_c1
399 Ga0495601_0000024
400 Ga0495612_0000216
401 Ga0495595_0000036
402 Ga0495619_0000034
403 Ga0500643_001572
404 Ga0500644_0000893
405 Ga0500651_0005989
406 Ga0500651_0263558
407 Ga0500593_026738
408 Ga0500595_000001
409 Ga0500642_0056021
410 Ga0500652_035140
411 Ga0500658_0047585
412 Ga0500568_0008623
413 Ga0500616_0000001
414 Ga0500645_000258
415 Ga0501084_0012063
416 Ga0501084_0031599
417 Ga0501084_0090908
418 Ga0501084_0250899
419 Ga0501082_0004991
420 Ga0501082_0057990
421 Ga0530510_0036228
422 2513863819
423 2517890141
424 2745077295
425 2891088728
426 2906640307
427 2906663635
428 2909047058

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

182

261

0.92

PF00890

FAD_binding_2

FAD binding domain

41

81

0.92

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

40

332

0.92

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

93

315

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ccr-assembly2.cif.gz_D crystal structure of the thioredoxin reductase apoenzyme from entamoeba histolytica in the absence of the nadp cofactor 0.8898 3 311
4ccr-assembly2.cif.gz_D crystal structure of the thioredoxin reductase apoenzyme from entamoeba histolytica in the absence of the nadp cofactor 0.8718 3 311
5utx-assembly1.cif.gz_B crystal structure of thioredoxin-disulfide reductase from vibrio vulnificus cmcp6 - apo form 0.8672 6 311
5utx-assembly1.cif.gz_B crystal structure of thioredoxin-disulfide reductase from vibrio vulnificus cmcp6 - apo form 0.8497 6 311
6kgr-assembly1.cif.gz_A lsd1-fcpa-mpe n5 adduct model 0.8479 147 183
ID Description Score Start End Superfamily
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9826 120 246 3.50.50.60
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9748 120 246 3.50.50.60
4zn0C02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9691 120 246 3.50.50.60
4ykgA03 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9642 120 246 3.50.50.60
3f8rD02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9628 120 246 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A3C0YJU2-F1-model_v4 deleted 1.002 138 203
AF-A0A3D5UWY6-F1-model_v4 Thioredoxin-disulfide reductase 0.9906 145 238 GO:0016491
AF-A0A3D5UWY6-F1-model_v4 Thioredoxin-disulfide reductase 0.9801 145 238 GO:0016491
AF-K1UEN0-F1-model_v4 Protein containing Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region domain protein (EC 1.-.-.-) 0.9799 143 210 GO:0016491
AF-A0A3C0GY85-F1-model_v4 deleted 0.9675 149 242

Map