F325231

General Info

Members Datasets Scaffolds Average Seq Length
214 165 197 471

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10000020|Ga0213872_1000002050
Length 520
Sequence MFKRLLCNPDCRTIGDNHAKKTIKGHKMSDYHQASLPLLQSLEPGEADVQAILAAFDSQGQTALRWRESTAAERIARVKRLRDAMLAQREAFYAAFAQDYRKSPAEVEASEFLPVMDEIRHVLGRLKRWMKPQHRWPTSTMLGTSASVQYQPRGRVLIIAPWNYPLGLCFGPLVSALAAGNTAIIKPSEMTPAVSALMGRIIAEVFPANEVALFEGAQPTSHALLQLPFDHIFFTGSPAVGKLVMAAAARNLTSVTLELGGKSPTIIDETADLNMAAETLMWGKFINNGQTCVAPDYVYVHASVKDAFVAACRRVLQQRYGATADAQKSSPDLTRIVNQRHTKRVMKLLSDAVQRGAKVSMGGETDESQCYVAPTILENIPAGAEILSEEIFGPLLPVMPYTSLDQVIAEINAAPKPLALYVWSRNKANTQRVLTRTSSGGACVNHCVAHFAHGNLPFGGVNNSGIGNAHGEYGFKAFSHERAVLRATPLMLIKMFFPPYTKTRTSLIRAVVDSLRLPML

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
3 2619618881 Frankia sp. ACN1ag Isolate Unclassified
4 2619619003 Frankia sp. CpI1-P Isolate Nodule
5 2626541554 Frankia sp. AvcI.1 Isolate Nodule
6 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
7 2643221645 Massilia sp. Root351 Isolate Unclassified
8 2738541280 Massilia sp. GV090 Isolate Unclassified
9 2738541284 Pedobacter sp. YR016 Isolate Unclassified
10 2738541300 Massilia sp. GV016 Isolate Unclassified
11 2738543018 Massilia sp. GV045 Isolate Unclassified
12 2738543030 Massilia sp. GV097 Isolate Unclassified
13 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
14 2818991436 Collimonas arenae 515 Isolate Unclassified
15 2818991441 Niallia circulans 3243 Isolate Rhizosphere
16 3007619802 Pseudomonas sp. PB120 Isolate Unclassified
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
19 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
20 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
23 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
24 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
25 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
26 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
27 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
28 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
83 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
87 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
97 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
104 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
125 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
143 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
165 8054920844 Frankia tisae Agncl-8 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.06
Metatranscriptomes 0
Isolates 7.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.76
Nodule 1.87
Rhizoplane 1.4
Rhizosphere 68.22
Stem 0
Stem Tuber 0
Unclassified 10.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3456730 2162886007 Bacteria 9441
2 JGI24740J21852_10000726 3300001979 Bacteria 14365
3 JGI25162J39368_1000445 3300002737 Bacteria 32834
4 JGI25151J46595_10000484 3300003187 Bacteria 37639
5 JGI25165J46597_1000122 3300003214 Bacteria 132559
6 rootL2_10000467 3300003322 Bacteria 50803
7 rootL2_10057551 3300003322 Bacteria 18219
8 Ga0055538_1000048 3300003751 Bacteria 132559
9 Ga0055539_1000070 3300003752 Bacteria 132559
10 Ga0055533_1000078 3300003756 Bacteria 132559
11 Ga0055525_1000106 3300003759 Bacteria 132559
12 Ga0055526_1000531 3300003771 Bacteria 30151
13 Ga0055530_10025792 3300003791 Bacteria 1635
14 Ga0055541_1000050 3300003841 Bacteria 132559
15 Ga0065714_10002336 3300005288 Bacteria 23974
16 Ga0065714_10003679 3300005288 Bacteria 10337
17 Ga0065704_10000218 3300005289 Bacteria 76484
18 Ga0070675_100000012 3300005354 Bacteria 217352
19 Ga0070713_100044377 3300005436 Bacteria 3639
20 Ga0068855_100065147 3300005563 Bacteria 4248
21 Ga0068857_100053597 3300005577 Bacteria 3578
22 Ga0068859_100196001 3300005617 Bacteria 2104
23 Ga0068859_100204566 3300005617 Bacteria 2059
24 Ga0068870_10046822 3300005840 Bacteria 2270
25 Ga0068863_100000419 3300005841 Bacteria 43150
26 Ga0068863_100051457 3300005841 Unclassified 3904
27 Ga0068858_100004530 3300005842 Bacteria 13614
28 Ga0068862_100000547 3300005844 Bacteria 39415
29 Ga0075365_10048030 3300006038 Bacteria 2808
30 Ga0075363_100013978 3300006048 Bacteria 3909
31 Ga0075432_10000766 3300006058 Bacteria 9992
32 Ga0070712_100006958 3300006175 Bacteria 7051
33 Ga0075362_10018409 3300006177 Bacteria 2889
34 Ga0075366_10005381 3300006195 Bacteria 6937
35 Ga0075366_10005747 3300006195 Bacteria 6734
36 Ga0075370_10002803 3300006353 Bacteria 8171
37 Ga0075428_100021145 3300006844 Bacteria 7206
38 Ga0075428_100252961 3300006844 Bacteria 1898
39 Ga0097620_100196013 3300006931 Bacteria 2104
40 Ga0097620_100204574 3300006931 Bacteria 2059
41 Ga0111539_10016769 3300009094 Bacteria 9077
42 Ga0105243_10000697 3300009148 Bacteria 32602
43 Ga0105249_10029570 3300009553 Bacteria 4949
44 Ga0157373_10000167 3300013100 Bacteria 53611
45 Ga0157371_10001037 3300013102 Bacteria 30465
46 Ga0157371_10001713 3300013102 Bacteria 22319
47 Ga0163163_10002291 3300014325 Bacteria 16160
48 Ga0182008_10000025 3300014497 Bacteria 191222
49 Ga0157377_10000040 3300014745 Bacteria 112182
50 Ga0182005_1001656 3300015265 Bacteria 8662
51 Ga0213872_10000020 3300021361 Bacteria 159607
52 Ga0213872_10000513 3300021361 Bacteria 30595
53 Ga0213872_10006603 3300021361 Bacteria 5789
54 Ga0213872_10008802 3300021361 Bacteria 4871
55 Ga0209760_101074 3300025207 Bacteria 3160
56 Ga0209784_100062 3300025224 Bacteria 162240
57 Ga0209566_100023 3300025225 Bacteria 396571
58 Ga0209674_100040 3300025226 Bacteria 396571
59 Ga0209563_100096 3300025230 Bacteria 162240
60 Ga0207427_100401 3300025231 Bacteria 25420
61 Ga0209437_100146 3300025233 Bacteria 162240
62 Ga0209677_100058 3300025253 Bacteria 162240
63 Ga0209129_1000651 3300025258 Bacteria 23242
64 Ga0209233_1000159 3300025261 Bacteria 162240
65 Ga0209025_1000207 3300025294 Bacteria 140774
66 Ga0209564_1000002 3300025295 Bacteria 1636803
67 Ga0209050_1000955 3300025298 Bacteria 37549
68 Ga0207643_10089851 3300025908 Bacteria 1789
69 Ga0207659_10000003 3300025926 Bacteria 523949
70 Ga0207667_10166681 3300025949 Bacteria 2265
71 Ga0207651_10011123 3300025960 Bacteria 5021
72 Ga0207712_10002511 3300025961 Bacteria 11805
73 Ga0207703_10026276 3300026035 Bacteria 4581
74 Ga0209371_1002722 3300027312 Bacteria 9517
75 Ga0207428_10064025 3300027907 Bacteria 2904
76 Ga0268265_10000518 3300028380 Bacteria 39429
77 Ga0265334_10000064 3300028573 Bacteria 78480
78 Ga0265323_10003233 3300028653 Bacteria 7258
79 Ga0265322_10004674 3300028654 Bacteria 4068
80 Ga0307515_10000012 3300028794 Bacteria 582232
81 Ga0307515_10051875 3300028794 Bacteria 6101
82 Ga0265338_10046964 3300028800 Bacteria 3949
83 Ga0268256_1008284 3300030500 Bacteria 3584
84 Ga0265330_10041756 3300031235 Bacteria 2033
85 Ga0265327_10000158 3300031251 Bacteria 145905
86 Ga0265327_10002814 3300031251 Bacteria 17561
87 Ga0265316_10000026 3300031344 Bacteria 165508
88 Ga0265316_10007144 3300031344 Bacteria 10558
89 Ga0307408_100000219 3300031548 Bacteria 61012
90 Ga0307408_100000630 3300031548 Bacteria 29823
91 Ga0265342_10021326 3300031712 Bacteria 4141
92 Ga0307406_10000604 3300031901 Bacteria 20514
93 Ga0307412_10000001 3300031911 Bacteria 822691
94 Ga0307414_10002342 3300032004 Bacteria 9897
95 Ga0307414_10004172 3300032004 Bacteria 7806
96 Ga0307414_10044864 3300032004 Bacteria 3023
97 Ga0307411_10007572 3300032005 Bacteria 5548
98 Ga0373951_0001962 3300035091 Bacteria 5286
99 Ga0373932_0000803 3300035112 Bacteria 9308
100 Ga0316574_0086644 3300035398 Bacteria 1993
101 Ga0373927_0028445 3300035695 Unclassified 3646
102 Ga0373937_0061745 3300036401 Bacteria 3445
103 Ga0395905_0000110 3300037471 Bacteria 137078
104 Ga0395905_0010001 3300037471 Bacteria 9245
105 Ga0395901_0002100 3300038443 Bacteria 20457
106 Ga0400490_14606 3300038726 Bacteria 18655
107 Ga0400491_19342 3300038727 Bacteria 17826
108 Ga0436361_0285452 3300039447 Bacteria 29974
109 Ga0436361_0311512 3300039447 Bacteria 5334
110 Ga0436361_0594223 3300039447 Bacteria 49801
111 Ga0436361_0901422 3300039447 Bacteria 18634
112 Ga0451577_0019734 3300042876 Bacteria 6194
113 Ga0451577_0029374 3300042876 Bacteria 4968
114 Ga0451577_0073036 3300042876 Bacteria 3061
115 Ga0453683_0019700 3300044673 Bacteria 4318
116 Ga0453683_0034739 3300044673 Bacteria 3178
117 Ga0453683_0076179 3300044673 Bacteria 2100
118 Ga0453684_0005860 3300044712 Bacteria 23887
119 Ga0453684_0007533 3300044712 Bacteria 19967
120 Ga0453684_0009818 3300044712 Bacteria 16585
121 Ga0453684_0020427 3300044712 Bacteria 9989
122 Ga0453684_0049370 3300044712 Bacteria 5550
123 Ga0453684_0165962 3300044712 Bacteria 2606
124 Ga0453684_0212084 3300044712 Bacteria 2250
125 Ga0453684_0275607 3300044712 Bacteria 1920
126 Ga0451576_0017349 3300045051 Bacteria 7918
127 Ga0495617_000239 3300046452 Bacteria 32922
128 Ga0495592_0011604 3300046454 Bacteria 6673
129 Ga0495638_0000004 3300046460 Bacteria 700795
130 Ga0495651_0001444 3300046462 Bacteria 18384
131 Ga0495651_0119668 3300046462 Bacteria 1936
132 Ga0495650_0000056 3300046471 Bacteria 307565
133 Ga0495650_0000495 3300046471 Bacteria 59867
134 Ga0495650_0039180 3300046471 Bacteria 2046
135 Ga0495605_0000003 3300046474 Bacteria 491502
136 Ga0495606_0001555 3300046507 Bacteria 30156
137 Ga0495606_0055962 3300046507 Bacteria 2548
138 Ga0495608_0014407 3300046511 Bacteria 5485
139 Ga0495608_0097637 3300046511 Bacteria 1896
140 Ga0495610_0004397 3300046512 Bacteria 10422
141 Ga0495620_0010506 3300046515 Bacteria 4883
142 Ga0495628_0000612 3300046516 Bacteria 32753
143 Ga0495628_0013875 3300046516 Bacteria 6768
144 Ga0495632_0024906 3300046519 Bacteria 3172
145 Ga0495643_0000346 3300046522 Bacteria 63025
146 Ga0495652_0009963 3300046529 Bacteria 8614
147 Ga0495598_0006416 3300046537 Bacteria 2659
148 Ga0495597_0000567 3300046542 Bacteria 30695
149 Ga0495645_0018284 3300046543 Bacteria 5032
150 Ga0495645_0056646 3300046543 Bacteria 2846
151 Ga0495622_0000361 3300046557 Bacteria 32027
152 Ga0495656_0000006 3300046615 Bacteria 237497
153 Ga0495625_0002035 3300046660 Bacteria 22760
154 Ga0495635_0027929 3300046663 Bacteria 3924
155 Ga0495659_0000006 3300046664 Bacteria 105925
156 Ga0495659_0003212 3300046664 Bacteria 5235
157 Ga0495659_0028564 3300046664 Bacteria 1931
158 Ga0495599_0003218 3300046678 Bacteria 9511
159 Ga0495623_0023339 3300046679 Bacteria 3993
160 Ga0495646_0000837 3300046680 Bacteria 17378
161 Ga0495671_0000425 3300046692 Bacteria 33604
162 Ga0495649_0002200 3300046694 Bacteria 13927
163 Ga0495660_0007634 3300046810 Bacteria 6351
164 Ga0495660_0078581 3300046810 Bacteria 1734
165 Ga0495604_0093733 3300047317 Bacteria 2221
166 Ga0495636_0008092 3300047318 Bacteria 4143
167 Ga0495672_0000215 3300047320 Bacteria 82448
168 Ga0495686_0031755 3300047472 Bacteria 3421
169 Ga0495602_0023703 3300048088 Bacteria 5974
170 Ga0495602_0052710 3300048088 Bacteria 3610
171 Ga0495615_0006581 3300048090 Bacteria 2162
172 Ga0496102_0001687 3300048905 Bacteria 19374
173 Ga0496103_0011887 3300048906 Bacteria 5168
174 Ga0496109_0032704 3300048912 Bacteria 4677
175 Ga0496116_0084623 3300048919 Bacteria 1953
176 Ga0496118_0048287 3300048921 Bacteria 3290
177 Ga0496124_0002334 3300048927 Bacteria 25044
178 Ga0496124_0005284 3300048927 Bacteria 14608
179 Ga0496124_0006747 3300048927 Bacteria 12412
180 Ga0495678_000794 3300049459 Bacteria 28294
181 Ga0495678_002923 3300049459 Bacteria 10944
182 Ga0501034_0202927 3300049571 Bacteria 1940
183 Ga0501034_0223226 3300049571 Bacteria 1836
184 Ga0501257_008322 3300049686 Bacteria 2328
185 Ga0501044_0102951 3300049823 Bacteria 2870
186 nmdc:mga03683_49352_c1 3300050489 Bacteria 1752
187 nmdc:mga00v17_7475_c1 3300050491 Bacteria 5833
188 nmdc:mga0k408_14569_c1 3300050493 Bacteria 4336
189 nmdc:mga07m45_513_c1 3300050496 Bacteria 16432
190 nmdc:mga08y16_2922_c1 3300050511 Bacteria 17577
191 Ga0495601_0007157 3300053077 Bacteria 6543
192 Ga0495601_0020515 3300053077 Bacteria 4037
193 Ga0500651_0000680 3300053093 Bacteria 16894
194 Ga0500595_010557 3300053119 Bacteria 3663
195 Ga0500568_0004390 3300053139 Bacteria 7549
196 Ga0500616_0000091 3300053153 Bacteria 184945
197 Ga0500616_0012768 3300053153 Bacteria 4904

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044673 Ga0453683_0034739 Ga0453683_0034739_66_1334 415
2 3300025908 Ga0207643_10089851 Ga0207643_100898512 419
3 3300005840 Ga0068870_10046822 Ga0068870_100468222 425
4 3300048927 Ga0496124_0006747 Ga0496124_0006747_7326_8615 429
5 3300005617 Ga0068859_100196001 Ga0068859_1001960012 430
6 3300005841 Ga0068863_100000419 Ga0068863_10000041931 430
7 3300005842 Ga0068858_100004530 Ga0068858_1000045307 430
8 3300005844 Ga0068862_100000547 Ga0068862_10000054711 430
9 3300006931 Ga0097620_100196013 Ga0097620_1001960132 430
10 3300009553 Ga0105249_10029570 Ga0105249_100295702 430
11 3300014325 Ga0163163_10002291 Ga0163163_100022914 430
12 3300025961 Ga0207712_10002511 Ga0207712_100025119 430
13 3300026035 Ga0207703_10026276 Ga0207703_100262764 430
14 3300028380 Ga0268265_10000518 Ga0268265_1000051827 430
15 3300044712 Ga0453684_0005860 Ga0453684_0005860_17592_18968 430
16 3300048921 Ga0496118_0048287 Ga0496118_0048287_1797_3140 430
17 3300003322 rootL2_10057551 rootL2_100575517 432
18 3300044712 Ga0453684_0020427 Ga0453684_0020427_7072_8472 434
19 3300031251 Ga0265327_10002814 Ga0265327_100028147 437
20 3300048905 Ga0496102_0001687 Ga0496102_0001687_5052_6401 437
21 3300048906 Ga0496103_0011887 Ga0496103_0011887_737_2086 437
22 3300005354 Ga0070675_100000012 Ga0070675_10000001293 439
23 3300025926 Ga0207659_10000003 Ga0207659_1000000393 439
24 3300053139 Ga0500568_0004390 Ga0500568_0004390_6027_7352 439
25 iso_pu_bacteria 2579778521 2579854269 439
26 iso_pu_bacteria 2619618881 2619853194 439
27 iso_pu_bacteria 2619619003 2620350439 439
28 3300048927 Ga0496124_0005284 Ga0496124_0005284_3850_5199 440
29 3300028653 Ga0265323_10003233 Ga0265323_100032335 441
30 3300028654 Ga0265322_10004674 Ga0265322_100046742 441
31 3300031235 Ga0265330_10041756 Ga0265330_100417562 441
32 3300031344 Ga0265316_10007144 Ga0265316_100071445 441
33 3300048927 Ga0496124_0002334 Ga0496124_0002334_8976_10316 441
34 iso_pu_bacteria 3007619802 3007625565 441
35 iso_pu_bacteria 8054913762 8054916534 441
36 iso_pu_bacteria 8054920844 8054923841 441
37 iso_pu_bacteria 2626541554 2626639526 442
38 3300046557 Ga0495622_0000361 Ga0495622_0000361_11545_13005 443
39 3300005577 Ga0068857_100053597 Ga0068857_1000535974 444
40 3300014745 Ga0157377_10000040 Ga0157377_1000004027 444
41 3300035112 Ga0373932_0000803 Ga0373932_0000803_1155_2552 444
42 3300003187 JGI25151J46595_10000484 JGI25151J46595_1000048442 446
43 3300005436 Ga0070713_100044377 Ga0070713_1000443773 446
44 3300006175 Ga0070712_100006958 Ga0070712_1000069582 446
45 3300006195 Ga0075366_10005747 Ga0075366_100057476 446
46 3300006353 Ga0075370_10002803 Ga0075370_100028036 446
47 3300025258 Ga0209129_1000651 Ga0209129_100065126 446
48 3300025294 Ga0209025_1000207 Ga0209025_100020768 446
49 3300050493 nmdc:mga0k408_14569_c1 nmdc:mga0k408_14569_c1_1634_3073 446
50 3300050496 nmdc:mga07m45_513_c1 nmdc:mga07m45_513_c1_6585_8024 446
51 3300005617 Ga0068859_100204566 Ga0068859_1002045662 447
52 3300006931 Ga0097620_100204574 Ga0097620_1002045742 447
53 3300037471 Ga0395905_0010001 Ga0395905_0010001_2005_3417 447
54 3300036401 Ga0373937_0061745 Ga0373937_0061745_14_1381 448
55 iso_pu_bacteria 2818991441 2819570678 448
56 3300009148 Ga0105243_10000697 Ga0105243_100006972 449
57 3300044712 Ga0453684_0009818 Ga0453684_0009818_4673_6049 450
58 3300044712 Ga0453684_0165962 Ga0453684_0165962_1097_2473 450
59 3300006844 Ga0075428_100021145 Ga0075428_1000211452 451
60 3300035398 Ga0316574_0086644 Ga0316574_0086644_183_1613 451
61 3300046515 Ga0495620_0010506 Ga0495620_0010506_1174_2577 451
62 3300053077 Ga0495601_0020515 Ga0495601_0020515_1586_3001 451
63 3300031712 Ga0265342_10021326 Ga0265342_100213262 452
64 3300027312 Ga0209371_1002722 Ga0209371_10027228 453
65 3300030500 Ga0268256_1008284 Ga0268256_10082844 453
66 3300035091 Ga0373951_0001962 Ga0373951_0001962_3253_4653 455
67 3300042876 Ga0451577_0029374 Ga0451577_0029374_1935_3338 455
68 3300044673 Ga0453683_0019700 Ga0453683_0019700_1112_2515 455
69 3300044673 Ga0453683_0076179 Ga0453683_0076179_411_1814 455
70 3300044712 Ga0453684_0275607 Ga0453684_0275607_238_1641 455
71 3300053153 Ga0500616_0012768 Ga0500616_0012768_1074_2477 455
72 3300046454 Ga0495592_0011604 Ga0495592_0011604_353_1786 456
73 3300046462 Ga0495651_0119668 Ga0495651_0119668_318_1751 456
74 3300046471 Ga0495650_0000056 Ga0495650_0000056_242588_243985 456
75 3300046471 Ga0495650_0039180 Ga0495650_0039180_104_1501 456
76 3300046511 Ga0495608_0014407 Ga0495608_0014407_3038_4471 456
77 3300046516 Ga0495628_0013875 Ga0495628_0013875_2273_3706 456
78 3300046543 Ga0495645_0018284 Ga0495645_0018284_2359_3792 456
79 3300046663 Ga0495635_0027929 Ga0495635_0027929_2005_3438 456
80 3300046678 Ga0495599_0003218 Ga0495599_0003218_632_2065 456
81 3300046679 Ga0495623_0023339 Ga0495623_0023339_846_2279 456
82 3300047317 Ga0495604_0093733 Ga0495604_0093733_494_1927 456
83 3300048088 Ga0495602_0052710 Ga0495602_0052710_1370_2803 456
84 3300049459 Ga0495678_002923 Ga0495678_002923_2081_3520 456
85 3300053077 Ga0495601_0007157 Ga0495601_0007157_1462_2895 456
86 3300053119 Ga0500595_010557 Ga0500595_010557_940_2373 456
87 iso_pu_bacteria 2818991436 2819541514 456
88 3300028573 Ga0265334_10000064 Ga0265334_1000006418 457
89 3300046615 Ga0495656_0000006 Ga0495656_0000006_140179_141570 457
90 3300046664 Ga0495659_0003212 Ga0495659_0003212_3072_4463 457
91 3300046664 Ga0495659_0028564 Ga0495659_0028564_195_1586 457
92 3300049823 Ga0501044_0102951 Ga0501044_0102951_411_1862 457
93 3300028800 Ga0265338_10046964 Ga0265338_100469642 458
94 3300002737 JGI25162J39368_1000445 JGI25162J39368_100044520 459
95 3300003214 JGI25165J46597_1000122 JGI25165J46597_100012250 459
96 3300003751 Ga0055538_1000048 Ga0055538_100004850 459
97 3300003752 Ga0055539_1000070 Ga0055539_100007050 459
98 3300003756 Ga0055533_1000078 Ga0055533_100007850 459
99 3300003759 Ga0055525_1000106 Ga0055525_100010650 459
100 3300003841 Ga0055541_1000050 Ga0055541_100005050 459
101 3300015265 Ga0182005_1001656 Ga0182005_10016568 459
102 3300025207 Ga0209760_101074 Ga0209760_1010742 459
103 3300025224 Ga0209784_100062 Ga0209784_10006250 459
104 3300025225 Ga0209566_100023 Ga0209566_100023271 459
105 3300025226 Ga0209674_100040 Ga0209674_100040271 459
106 3300025230 Ga0209563_100096 Ga0209563_10009650 459
107 3300025231 Ga0207427_100401 Ga0207427_10040118 459
108 3300025233 Ga0209437_100146 Ga0209437_10014650 459
109 3300025253 Ga0209677_100058 Ga0209677_10005850 459
110 3300025261 Ga0209233_1000159 Ga0209233_100015950 459
111 3300042876 Ga0451577_0073036 Ga0451577_0073036_128_1540 459
112 3300046462 Ga0495651_0001444 Ga0495651_0001444_399_1841 459
113 3300046511 Ga0495608_0097637 Ga0495608_0097637_298_1740 459
114 3300046516 Ga0495628_0000612 Ga0495628_0000612_29065_30507 459
115 3300046529 Ga0495652_0009963 Ga0495652_0009963_1072_2514 459
116 3300046543 Ga0495645_0056646 Ga0495645_0056646_886_2328 459
117 3300046680 Ga0495646_0000837 Ga0495646_0000837_8952_10394 459
118 3300048088 Ga0495602_0023703 Ga0495602_0023703_3020_4462 459
119 3300046507 Ga0495606_0055962 Ga0495606_0055962_609_2105 460
120 3300049571 Ga0501034_0223226 Ga0501034_0223226_201_1646 460
121 3300049686 Ga0501257_008322 Ga0501257_008322_620_2065 460
122 3300003791 Ga0055530_10025792 Ga0055530_100257921 461
123 3300005563 Ga0068855_100065147 Ga0068855_1000651472 461
124 3300005841 Ga0068863_100051457 Ga0068863_1000514574 461
125 3300006844 Ga0075428_100252961 Ga0075428_1002529612 461
126 3300009094 Ga0111539_10016769 Ga0111539_100167696 461
127 3300025298 Ga0209050_1000955 Ga0209050_10009554 461
128 3300025949 Ga0207667_10166681 Ga0207667_101666812 461
129 3300035695 Ga0373927_0028445 Ga0373927_0028445_1958_3397 461
130 3300038726 Ga0400490_14606 Ga0400490_14606_9331_10734 461
131 3300038727 Ga0400491_19342 Ga0400491_19342_7910_9313 461
132 3300046460 Ga0495638_0000004 Ga0495638_0000004_166249_167682 461
133 3300046519 Ga0495632_0024906 Ga0495632_0024906_1573_3006 461
134 3300050511 nmdc:mga08y16_2922_c1 nmdc:mga08y16_2922_c1_670_2103 461
135 3300053153 Ga0500616_0000091 Ga0500616_0000091_160004_161437 461
136 iso_pu_bacteria 2643221644 2644248527 461
137 3300028794 Ga0307515_10000012 Ga0307515_10000012208 462
138 3300028794 Ga0307515_10051875 Ga0307515_100518754 462
139 3300044712 Ga0453684_0212084 Ga0453684_0212084_756_2186 462
140 3300045051 Ga0451576_0017349 Ga0451576_0017349_591_2021 462
141 3300046537 Ga0495598_0006416 Ga0495598_0006416_700_2124 462
142 iso_pu_bacteria 2738541280 2738742575 462
143 iso_pu_bacteria 2738541284 2738761524 462
144 iso_pu_bacteria 2775506987 2776615840 462
145 3300044712 Ga0453684_0007533 Ga0453684_0007533_3124_4614 463
146 3300047318 Ga0495636_0008092 Ga0495636_0008092_289_1728 463
147 3300048090 Ga0495615_0006581 Ga0495615_0006581_363_1802 463
148 3300048912 Ga0496109_0032704 Ga0496109_0032704_2107_3558 463
149 3300001979 JGI24740J21852_10000726 JGI24740J21852_1000072610 464
150 3300003771 Ga0055526_1000531 Ga0055526_100053134 464
151 3300006038 Ga0075365_10048030 Ga0075365_100480302 464
152 3300006048 Ga0075363_100013978 Ga0075363_1000139784 464
153 3300006058 Ga0075432_10000766 Ga0075432_1000076610 464
154 3300006177 Ga0075362_10018409 Ga0075362_100184091 464
155 3300006195 Ga0075366_10005381 Ga0075366_100053816 464
156 3300025295 Ga0209564_1000002 Ga0209564_10000021184 464
157 3300025960 Ga0207651_10011123 Ga0207651_100111234 464
158 3300027907 Ga0207428_10064025 Ga0207428_100640253 464
159 3300031548 Ga0307408_100000219 Ga0307408_10000021936 464
160 3300031901 Ga0307406_10000604 Ga0307406_1000060410 464
161 3300042876 Ga0451577_0019734 Ga0451577_0019734_4315_5757 464
162 3300044712 Ga0453684_0049370 Ga0453684_0049370_2650_4092 464
163 3300046810 Ga0495660_0007634 Ga0495660_0007634_1534_2967 464
164 3300047472 Ga0495686_0031755 Ga0495686_0031755_280_1713 464
165 3300050489 nmdc:mga03683_49352_c1 nmdc:mga03683_49352_c1_171_1610 464
166 3300050491 nmdc:mga00v17_7475_c1 nmdc:mga00v17_7475_c1_215_1654 464
167 3300003322 rootL2_10000467 rootL2_1000046713 465
168 3300031251 Ga0265327_10000158 Ga0265327_1000015831 465
169 3300031344 Ga0265316_10000026 Ga0265316_1000002629 465
170 3300032004 Ga0307414_10044864 Ga0307414_100448642 465
171 3300032005 Ga0307411_10007572 Ga0307411_100075723 465
172 3300037471 Ga0395905_0000110 Ga0395905_0000110_8857_10317 465
173 3300046474 Ga0495605_0000003 Ga0495605_0000003_97003_98439 465
174 3300048919 Ga0496116_0084623 Ga0496116_0084623_443_1906 465
175 2162886007 SwRhRL2b_contig_3456730 SwRhRL2b_0596.00005800 466
176 3300005288 Ga0065714_10002336 Ga0065714_100023366 466
177 3300005288 Ga0065714_10003679 Ga0065714_100036795 466
178 3300005289 Ga0065704_10000218 Ga0065704_1000021830 466
179 3300013100 Ga0157373_10000167 Ga0157373_1000016722 466
180 3300013102 Ga0157371_10001037 Ga0157371_1000103724 466
181 3300013102 Ga0157371_10001713 Ga0157371_1000171311 466
182 3300014497 Ga0182008_10000025 Ga0182008_1000002564 466
183 3300021361 Ga0213872_10000020 Ga0213872_1000002050 466
184 3300021361 Ga0213872_10000513 Ga0213872_100005138 466
185 3300021361 Ga0213872_10006603 Ga0213872_100066038 466
186 3300021361 Ga0213872_10008802 Ga0213872_100088027 466
187 3300031548 Ga0307408_100000630 Ga0307408_1000006308 466
188 3300031911 Ga0307412_10000001 Ga0307412_10000001509 466
189 3300032004 Ga0307414_10002342 Ga0307414_100023422 466
190 3300032004 Ga0307414_10004172 Ga0307414_100041725 466
191 3300038443 Ga0395901_0002100 Ga0395901_0002100_5863_7341 466
192 3300039447 Ga0436361_0285452 Ga0436361_0285452_24757_26232 466
193 3300039447 Ga0436361_0311512 Ga0436361_0311512_3358_4833 466
194 3300039447 Ga0436361_0594223 Ga0436361_0594223_30017_31579 466
195 3300039447 Ga0436361_0901422 Ga0436361_0901422_9975_11450 466
196 3300046452 Ga0495617_000239 Ga0495617_000239_1422_2894 466
197 3300046471 Ga0495650_0000495 Ga0495650_0000495_2819_4297 466
198 3300046507 Ga0495606_0001555 Ga0495606_0001555_13168_14646 466
199 3300046512 Ga0495610_0004397 Ga0495610_0004397_2614_4086 466
200 3300046522 Ga0495643_0000346 Ga0495643_0000346_15806_17278 466
201 3300046542 Ga0495597_0000567 Ga0495597_0000567_17826_19298 466
202 3300046660 Ga0495625_0002035 Ga0495625_0002035_7246_8715 466
203 3300046664 Ga0495659_0000006 Ga0495659_0000006_20595_22091 466
204 3300046692 Ga0495671_0000425 Ga0495671_0000425_21425_22894 466
205 3300046694 Ga0495649_0002200 Ga0495649_0002200_6627_8099 466
206 3300046810 Ga0495660_0078581 Ga0495660_0078581_57_1526 466
207 3300047320 Ga0495672_0000215 Ga0495672_0000215_55200_56672 466
208 3300049459 Ga0495678_000794 Ga0495678_000794_14209_15681 466
209 3300049571 Ga0501034_0202927 Ga0501034_0202927_307_1776 466
210 3300053093 Ga0500651_0000680 Ga0500651_0000680_12501_13901 466
211 iso_pu_bacteria 2643221645 2644255282 466
212 iso_pu_bacteria 2738541300 2738846470 466
213 iso_pu_bacteria 2738543018 2739277113 466
214 iso_pu_bacteria 2738543030 2739346327 466

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

38

484

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9623 5 450
5ucd-assembly1.cif.gz_B benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with bound nadp+ and benzoate adduct 0.9617 1 439
4l1o-assembly1.cif.gz_A crystal structure of human aldh3a1 with inhibitor 1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-1h-indole-2,3-dione 0.9596 4 450
8bb8-assembly1.cif.gz_A crystal structure of human aldehyde dehydrogenase aldh3a1 in complex with octanal 0.9575 4 450
4qgk-assembly1.cif.gz_B structure of the human sjogren larsson syndrome enzyme fatty aldehyde dehydrogenase (faldh) 0.9566 5 461
ID Description Score Start End Superfamily
af_F1LT79_6_152_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9864 68 213 3.40.605.10
af_A0A0P0Y7S8_7_101_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9831 122 214 3.40.605.10
af_P48448_2_131_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9802 84 213 3.40.605.10
af_Q2FWX9_4_206_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9784 6 206 3.40.605.10
af_A0A486WWU7_1_211_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.976 6 213 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A7C8Z515-F1-model_v4 Aldehyde dehydrogenase (NAD(+)) (EC 1.2.1.3) 0.9907 31 155 GO:0004029
GO:0005737
GO:0006081
AF-M6RLH9-F1-model_v4 Aldehyde dehydrogenase (NAD) domain protein 0.9868 3 165 GO:0004029
GO:0005737
GO:0006081
AF-A0A1B6L6W4-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9796 5 272 GO:0004029
GO:0005737
GO:0006081
AF-A0A7V5DD63-F1-model_v4 Aldehyde dehydrogenase 0.9785 2 465 GO:0004029
GO:0005737
GO:0006081
AF-A0A2W4P3P3-F1-model_v4 Aldehyde dehydrogenase 0.9782 5 464 GO:0004029
GO:0005737
GO:0006081

Feature Viewer

pLDDT pTM Quality
94.84 0.92 High
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Predicted Structure (AlphaFold2)

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