F324033

General Info

Members Datasets Scaffolds Average Seq Length
213 153 206 362

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10097905|Ga0105239_100979052
Length 376
Sequence LISCADAAPVRLAERDNDVTQADIAIVGAGIAGASLAAMIGDRARVVLIEAESHPGYHATGRSAAFWSESYGGPWVQPLTTASQPWLDVHGFLHPRGCIHIADAQGQPALDALAAEMADCGVAHAWLDRATLESAIPGLRPEFTVGLAEPTCRDIDVSGLHGDFLARARRAGAILLTDAEVTDVARTEGGWRIGTRAGQVSSRLLVNAAGAWANRIAALAGASAVDIQPYRRTIAQLTTDPAMASAMPLVMDALGRFYFKPEAGGRLWLSPHDETPVEEELDVAIAIDRFERVVDWRIIRRERAWAGLRSFAPDRLPVYGFDGQAPGFFWFAGQGGFGIQTAPAAAMLAAAVLLGEALPEPVAGIDPARYSPMRFG

Samples

Sample ID Description Type Environment
1 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
2 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
3 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
4 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
5 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
6 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
9 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
10 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
116 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
117 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
118 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
119 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
131 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
136 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
137 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
142 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
143 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
144 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
145 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
152 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
153 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.71
Metatranscriptomes 0
Isolates 3.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.8
Nodule 0
Rhizoplane 0.47
Rhizosphere 79.34
Stem 0
Stem Tuber 0
Unclassified 9.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10004093 3300001989 Bacteria 5574
2 JGI24739J22299_10017245 3300001989 Bacteria 2607
3 JGI24737J22298_10001559 3300001990 Bacteria 8155
4 JGI24737J22298_10002880 3300001990 Bacteria 6103
5 JGI24737J22298_10032321 3300001990 Bacteria 1630
6 JGI24735J21928_10000824 3300002067 Bacteria 11029
7 JGI24735J21928_10006510 3300002067 Bacteria 3842
8 JGI24735J21928_10007583 3300002067 Bacteria 3535
9 JGI24738J21930_10000515 3300002075 Bacteria 11037
10 JGI25165J46597_1000021 3300003214 Bacteria 359288
11 JGI25165J46597_1000173 3300003214 Bacteria 100834
12 JGI25153J46596_10000021 3300003215 Bacteria 252651
13 Ga0055525_1000070 3300003759 Bacteria 183047
14 Ga0055542_1000102 3300003762 Bacteria 115614
15 Ga0055542_1003674 3300003762 Bacteria 4031
16 Ga0055529_1000136 3300003763 Bacteria 104102
17 Ga0065165_1001326 3300005262 Bacteria 27536
18 Ga0070658_10000066 3300005327 Bacteria 103408
19 Ga0070658_10000774 3300005327 Bacteria 27456
20 Ga0070658_10012861 3300005327 Bacteria 6718
21 Ga0070676_10000029 3300005328 Bacteria 43536
22 Ga0070670_100047581 3300005331 Bacteria 3691
23 Ga0068869_100001320 3300005334 Bacteria 14687
24 Ga0068869_100141298 3300005334 Bacteria 1859
25 Ga0068868_100000139 3300005338 Bacteria 46645
26 Ga0070660_100002653 3300005339 Bacteria 12288
27 Ga0070660_100003796 3300005339 Bacteria 10437
28 Ga0070660_100043666 3300005339 Bacteria 3426
29 Ga0070668_100000028 3300005347 Bacteria 89707
30 Ga0070671_100000750 3300005355 Bacteria 23268
31 Ga0070671_100049964 3300005355 Bacteria 3479
32 Ga0070673_100000013 3300005364 Bacteria 137021
33 Ga0070659_100005406 3300005366 Bacteria 9172
34 Ga0070659_100256970 3300005366 Bacteria 1449
35 Ga0070663_100002178 3300005455 Bacteria 10952
36 Ga0070678_100010039 3300005456 Bacteria 5763
37 Ga0070662_100003284 3300005457 Bacteria 10070
38 Ga0070662_100127620 3300005457 Bacteria 1957
39 Ga0068867_100000009 3300005459 Bacteria 137021
40 Ga0070679_100199203 3300005530 Bacteria 1969
41 Ga0070686_100000618 3300005544 Bacteria 20830
42 Ga0070665_100000480 3300005548 Bacteria 57573
43 Ga0068855_100000040 3300005563 Bacteria 153617
44 Ga0068855_100032635 3300005563 Bacteria 6217
45 Ga0068857_100005655 3300005577 Bacteria 10688
46 Ga0068854_100000419 3300005578 Bacteria 26489
47 Ga0068856_100247033 3300005614 Bacteria 1800
48 Ga0068852_100000782 3300005616 Bacteria 20878
49 Ga0068851_10029462 3300005834 Bacteria 2718
50 Ga0068863_100000092 3300005841 Bacteria 97076
51 Ga0068863_100178537 3300005841 Bacteria 2038
52 Ga0068858_100003008 3300005842 Bacteria 16905
53 Ga0068860_100023172 3300005843 Bacteria 6003
54 Ga0068862_100004125 3300005844 Bacteria 12309
55 Ga0068862_100032356 3300005844 Bacteria 4419
56 Ga0081539_10008484 3300005985 Bacteria 8928
57 Ga0097621_100165574 3300006237 Bacteria 1903
58 Ga0075430_100112331 3300006846 Bacteria 2271
59 Ga0068865_100000005 3300006881 Bacteria 213248
60 Ga0105240_10036606 3300009093 Bacteria 6311
61 Ga0105245_10000244 3300009098 Bacteria 52007
62 Ga0105245_10015083 3300009098 Bacteria 6731
63 Ga0105247_10125370 3300009101 Bacteria 1668
64 Ga0105243_10000032 3300009148 Bacteria 183324
65 Ga0105241_10063237 3300009174 Bacteria 2855
66 Ga0105242_10000166 3300009176 Bacteria 49832
67 Ga0105249_10002730 3300009553 Bacteria 15266
68 Ga0105239_10007000 3300010375 Bacteria 12978
69 Ga0105239_10097905 3300010375 Bacteria 3242
70 Ga0105246_10032011 3300011119 Bacteria 3484
71 Ga0157373_10009788 3300013100 Bacteria 7070
72 Ga0157373_10097263 3300013100 Bacteria 2072
73 Ga0157370_10000244 3300013104 Bacteria 69583
74 Ga0157370_10001083 3300013104 Bacteria 34095
75 Ga0157370_10189955 3300013104 Bacteria 1907
76 Ga0157369_10020711 3300013105 Bacteria 7352
77 Ga0157374_10000134 3300013296 Bacteria 67433
78 Ga0157378_10001179 3300013297 Bacteria 23765
79 Ga0157372_10011211 3300013307 Bacteria 9537
80 Ga0157372_10043727 3300013307 Bacteria 4961
81 Ga0157372_10044235 3300013307 Bacteria 4934
82 Ga0157375_10000242 3300013308 Bacteria 50251
83 Ga0157376_10000111 3300014969 Bacteria 58460
84 Ga0213876_10085797 3300021384 Bacteria 1666
85 Ga0209563_100053 3300025230 Bacteria 332370
86 Ga0207427_101262 3300025231 Bacteria 9687
87 Ga0209026_1002597 3300025250 Bacteria 6628
88 Ga0209148_1000159 3300025254 Bacteria 139560
89 Ga0209148_1000160 3300025254 Bacteria 139522
90 Ga0209148_1001664 3300025254 Bacteria 10011
91 Ga0209233_1000003 3300025261 Bacteria 1607366
92 Ga0209233_1000065 3300025261 Bacteria 387195
93 Ga0209455_1000045 3300025272 Bacteria 383329
94 Ga0209455_1001635 3300025272 Bacteria 9774
95 Ga0209758_1000023 3300025297 Bacteria 612453
96 Ga0207710_10083324 3300025900 Bacteria 1486
97 Ga0207647_10000115 3300025904 Bacteria 61973
98 Ga0207647_10016927 3300025904 Bacteria 4964
99 Ga0207645_10005071 3300025907 Bacteria 9644
100 Ga0207705_10000046 3300025909 Bacteria 177574
101 Ga0207705_10000261 3300025909 Bacteria 51020
102 Ga0207705_10002811 3300025909 Bacteria 13308
103 Ga0207654_10064866 3300025911 Bacteria 2148
104 Ga0207695_10046092 3300025913 Bacteria 4622
105 Ga0207657_10004639 3300025919 Bacteria 14521
106 Ga0207657_10012870 3300025919 Bacteria 8228
107 Ga0207694_10021313 3300025924 Bacteria 4910
108 Ga0207650_10017057 3300025925 Bacteria 5082
109 Ga0207644_10000094 3300025931 Bacteria 64592
110 Ga0207644_10002878 3300025931 Bacteria 11089
111 Ga0207644_10024681 3300025931 Bacteria 4129
112 Ga0207690_10012800 3300025932 Bacteria 5026
113 Ga0207706_10004193 3300025933 Bacteria 13572
114 Ga0207706_10010773 3300025933 Bacteria 8346
115 Ga0207706_10060953 3300025933 Bacteria 3323
116 Ga0207686_10000250 3300025934 Bacteria 40936
117 Ga0207709_10000051 3300025935 Bacteria 227968
118 Ga0207704_10000001 3300025938 Bacteria 716296
119 Ga0207691_10119932 3300025940 Bacteria 2332
120 Ga0207689_10000059 3300025942 Bacteria 85713
121 Ga0207667_10000024 3300025949 Bacteria 355874
122 Ga0207667_10127814 3300025949 Bacteria 2618
123 Ga0207651_10000006 3300025960 Bacteria 227893
124 Ga0207712_10014548 3300025961 Bacteria 5066
125 Ga0207668_10001023 3300025972 Bacteria 16730
126 Ga0207640_10000031 3300025981 Bacteria 120815
127 Ga0207640_10101825 3300025981 Bacteria 2016
128 Ga0207677_10000251 3300026023 Bacteria 41529
129 Ga0207703_10000927 3300026035 Bacteria 28560
130 Ga0207678_10003572 3300026067 Bacteria 13981
131 Ga0207678_10050590 3300026067 Bacteria 3589
132 Ga0207678_10323754 3300026067 Bacteria 1326
133 Ga0207702_10105820 3300026078 Bacteria 2492
134 Ga0207702_10160187 3300026078 Bacteria 2055
135 Ga0207641_10000004 3300026088 Bacteria 481088
136 Ga0207641_10056998 3300026088 Bacteria 3322
137 Ga0207648_10000022 3300026089 Bacteria 137000
138 Ga0207674_10094961 3300026116 Bacteria 2968
139 Ga0207698_10000287 3300026142 Bacteria 30576
140 Ga0268266_10000337 3300028379 Bacteria 73510
141 Ga0268264_10002475 3300028381 Bacteria 16228
142 Ga0268264_10045833 3300028381 Bacteria 3632
143 Ga0307513_10195269 3300031456 Bacteria 1871
144 Ga0307508_10000810 3300031616 Bacteria 36605
145 Ga0307412_10000306 3300031911 Bacteria 30998
146 Ga0307409_100271111 3300031995 Bacteria 1563
147 Ga0307416_100126801 3300032002 Bacteria 2288
148 Ga0307414_10159442 3300032004 Bacteria 1790
149 Ga0395900_0063457 3300037418 Bacteria 3797
150 Ga0395900_0069111 3300037418 Bacteria 3630
151 Ga0395905_0000092 3300037471 Bacteria 149300
152 Ga0395905_0021547 3300037471 Bacteria 6093
153 Ga0395901_0000188 3300038443 Bacteria 78908
154 Ga0395901_0033174 3300038443 Bacteria 5328
155 Ga0436365_0424287 3300039437 Bacteria 1671
156 Ga0436365_1506429 3300039437 Bacteria 18869
157 Ga0439448_0000396 3300042005 Bacteria 9914
158 Ga0439448_0002670 3300042005 Bacteria 4871
159 Ga0439448_0006889 3300042005 Bacteria 3278
160 Ga0439455_0000282 3300042012 Bacteria 6283
161 Ga0439455_0000589 3300042012 Bacteria 5235
162 Ga0439458_0001662 3300042157 Bacteria 5552
163 Ga0466972_0057532 3300044658 Bacteria 1867
164 Ga0466965_0053324 3300044683 Bacteria 2010
165 Ga0466966_0028828 3300044684 Bacteria 3614
166 Ga0466963_0003352 3300044694 Bacteria 9147
167 Ga0466963_0132988 3300044694 Bacteria 1719
168 Ga0466970_0001538 3300044765 Bacteria 11100
169 Ga0466957_0022996 3300044842 Bacteria 3680
170 Ga0466959_0060193 3300045049 Bacteria 2763
171 Ga0451576_0000041 3300045051 Bacteria 343432
172 Ga0466967_0020640 3300045976 Bacteria 5331
173 Ga0466967_0115172 3300045976 Bacteria 2475
174 Ga0495625_0000112 3300046660 Bacteria 124365
175 Ga0495625_0000971 3300046660 Bacteria 38119
176 Ga0495686_0025783 3300047472 Bacteria 3850
177 Ga0496121_0146395 3300048924 Bacteria 1745
178 Ga0496122_0003881 3300048925 Bacteria 19165
179 Ga0496123_0011244 3300048926 Bacteria 7785
180 Ga0496123_0012184 3300048926 Bacteria 7359
181 Ga0496123_0052919 3300048926 Bacteria 2688
182 Ga0496124_0000874 3300048927 Bacteria 49185
183 Ga0496124_0005202 3300048927 Bacteria 14776
184 Ga0496124_0012507 3300048927 Bacteria 8370
185 Ga0496124_0026782 3300048927 Bacteria 5191
186 Ga0496125_0031161 3300048928 Bacteria 4757
187 Ga0496126_0108780 3300048929 Bacteria 2417
188 Ga0496126_0170285 3300048929 Bacteria 1855
189 Ga0501290_000014 3300049513 Bacteria 26259
190 Ga0501292_000015 3300049515 Bacteria 64087
191 Ga0501294_000034 3300049517 Bacteria 13717
192 Ga0501046_0161371 3300049580 Bacteria 1686
193 Ga0501227_024839 3300049665 Bacteria 1401
194 Ga0501235_015227 3300049669 Bacteria 1696
195 Ga0501261_000610 3300049690 Bacteria 4527
196 Ga0501279_000015 3300049775 Bacteria 64426
197 Ga0501280_000226 3300049776 Bacteria 14226
198 Ga0501282_000128 3300049778 Bacteria 9060
199 Ga0501283_000737 3300049779 Bacteria 4286
200 nmdc:mga0k408_49064_c1 3300050493 Bacteria 2008
201 nmdc:mga0n895_121758_c1 3300050512 Bacteria 2630
202 Ga0500643_002013 3300053087 Bacteria 10942
203 Ga0500595_023159 3300053119 Bacteria 2187
204 Ga0500559_0029724 3300053136 Bacteria 2341
205 Ga0500622_0000910 3300053156 Bacteria 25133
206 Ga0466962_0004879 3300061719 Bacteria 6451

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005262 Ga0065165_1001326 Ga0065165_100132619 326
2 3300049580 Ga0501046_0161371 Ga0501046_0161371_682_1674 329
3 3300050512 nmdc:mga0n895_121758_c1 nmdc:mga0n895_121758_c1_858_1925 337
4 3300032004 Ga0307414_10159442 Ga0307414_101594421 338
5 3300005843 Ga0068860_100023172 Ga0068860_1000231724 341
6 3300028381 Ga0268264_10045833 Ga0268264_100458334 341
7 3300001990 JGI24737J22298_10001559 JGI24737J22298_100015599 344
8 3300001990 JGI24737J22298_10002880 JGI24737J22298_100028802 344
9 3300001990 JGI24737J22298_10032321 JGI24737J22298_100323212 344
10 3300002067 JGI24735J21928_10000824 JGI24735J21928_100008243 344
11 3300002075 JGI24738J21930_10000515 JGI24738J21930_100005153 344
12 3300005457 Ga0070662_100003284 Ga0070662_1000032848 344
13 3300009174 Ga0105241_10063237 Ga0105241_100632373 344
14 3300010375 Ga0105239_10007000 Ga0105239_1000700012 344
15 3300025904 Ga0207647_10000115 Ga0207647_1000011513 344
16 3300025933 Ga0207706_10004193 Ga0207706_1000419315 344
17 3300050493 nmdc:mga0k408_49064_c1 nmdc:mga0k408_49064_c1_289_1335 346
18 3300005530 Ga0070679_100199203 Ga0070679_1001992032 347
19 3300031456 Ga0307513_10195269 Ga0307513_101952692 347
20 3300044694 Ga0466963_0132988 Ga0466963_0132988_22_1116 347
21 3300031995 Ga0307409_100271111 Ga0307409_1002711112 348
22 3300009098 Ga0105245_10000244 Ga0105245_1000024443 349
23 3300025261 Ga0209233_1000065 Ga0209233_100006517 349
24 3300031616 Ga0307508_10000810 Ga0307508_1000081015 349
25 3300049517 Ga0501294_000034 Ga0501294_000034_4328_5395 352
26 3300049778 Ga0501282_000128 Ga0501282_000128_6981_8048 352
27 iso_pu_bacteria 2599185359 2600225511 352
28 iso_pu_bacteria 2818991466 2819713948 352
29 iso_pu_bacteria 2928526807 2928528511 352
30 iso_pu_bacteria 2928968154 2928970056 352
31 iso_pu_bacteria 2830075706 2830078973 353
32 3300031911 Ga0307412_10000306 Ga0307412_1000030615 354
33 3300048927 Ga0496124_0000874 Ga0496124_0000874_30092_31159 354
34 3300048928 Ga0496125_0031161 Ga0496125_0031161_1892_2980 354
35 3300048929 Ga0496126_0108780 Ga0496126_0108780_519_1586 354
36 3300005334 Ga0068869_100141298 Ga0068869_1001412982 355
37 3300005544 Ga0070686_100000618 Ga0070686_1000006182 355
38 3300005548 Ga0070665_100000480 Ga0070665_10000048031 355
39 3300005841 Ga0068863_100178537 Ga0068863_1001785373 355
40 3300005985 Ga0081539_10008484 Ga0081539_100084845 355
41 3300013104 Ga0157370_10000244 Ga0157370_1000024420 355
42 3300021384 Ga0213876_10085797 Ga0213876_100857972 355
43 3300025931 Ga0207644_10024681 Ga0207644_100246814 355
44 3300026088 Ga0207641_10056998 Ga0207641_100569983 355
45 3300028379 Ga0268266_10000337 Ga0268266_1000033727 355
46 3300037418 Ga0395900_0063457 Ga0395900_0063457_1244_2341 355
47 3300037471 Ga0395905_0000092 Ga0395905_0000092_87063_88157 355
48 3300038443 Ga0395901_0000188 Ga0395901_0000188_34372_35469 355
49 3300039437 Ga0436365_1506429 Ga0436365_1506429_7456_8526 355
50 3300045049 Ga0466959_0060193 Ga0466959_0060193_1118_2212 355
51 3300048926 Ga0496123_0011244 Ga0496123_0011244_5664_6737 356
52 3300048926 Ga0496123_0052919 Ga0496123_0052919_382_1455 356
53 3300048927 Ga0496124_0005202 Ga0496124_0005202_7512_8585 356
54 3300048927 Ga0496124_0012507 Ga0496124_0012507_1811_2884 356
55 iso_pu_bacteria 8054302542 8054302799 356
56 3300025924 Ga0207694_10021313 Ga0207694_100213135 357
57 iso_pu_bacteria 2946787523 2946789470 357
58 3300003762 Ga0055542_1003674 Ga0055542_10036741 358
59 3300005339 Ga0070660_100003796 Ga0070660_1000037966 358
60 3300005563 Ga0068855_100032635 Ga0068855_1000326356 358
61 3300013104 Ga0157370_10189955 Ga0157370_101899552 358
62 3300025254 Ga0209148_1000160 Ga0209148_100016021 358
63 3300048924 Ga0496121_0146395 Ga0496121_0146395_473_1567 358
64 3300005844 Ga0068862_100004125 Ga0068862_1000041255 359
65 3300009101 Ga0105247_10125370 Ga0105247_101253702 359
66 3300025900 Ga0207710_10083324 Ga0207710_100833242 359
67 3300003215 JGI25153J46596_10000021 JGI25153J46596_1000002129 360
68 3300003762 Ga0055542_1000102 Ga0055542_100010292 360
69 3300003763 Ga0055529_1000136 Ga0055529_100013680 360
70 3300005327 Ga0070658_10000066 Ga0070658_1000006686 360
71 3300005339 Ga0070660_100002653 Ga0070660_1000026533 360
72 3300005339 Ga0070660_100043666 Ga0070660_1000436663 360
73 3300005366 Ga0070659_100005406 Ga0070659_1000054063 360
74 3300005456 Ga0070678_100010039 Ga0070678_1000100391 360
75 3300005457 Ga0070662_100127620 Ga0070662_1001276202 360
76 3300010375 Ga0105239_10097905 Ga0105239_100979052 360
77 3300013307 Ga0157372_10044235 Ga0157372_100442352 360
78 3300025254 Ga0209148_1000159 Ga0209148_1000159114 360
79 3300025272 Ga0209455_1000045 Ga0209455_100004529 360
80 3300025297 Ga0209758_1000023 Ga0209758_1000023254 360
81 3300025909 Ga0207705_10000261 Ga0207705_100002614 360
82 3300025919 Ga0207657_10004639 Ga0207657_100046393 360
83 3300025919 Ga0207657_10012870 Ga0207657_100128706 360
84 3300025932 Ga0207690_10012800 Ga0207690_100128002 360
85 3300025933 Ga0207706_10060953 Ga0207706_100609533 360
86 3300044694 Ga0466963_0003352 Ga0466963_0003352_2698_3798 360
87 3300045976 Ga0466967_0020640 Ga0466967_0020640_2342_3442 360
88 3300053119 Ga0500595_023159 Ga0500595_023159_867_1964 360
89 3300053156 Ga0500622_0000910 Ga0500622_0000910_16556_17653 360
90 3300061719 Ga0466962_0004879 Ga0466962_0004879_1782_2882 360
91 3300003214 JGI25165J46597_1000021 JGI25165J46597_100002118 361
92 3300005842 Ga0068858_100003008 Ga0068858_1000030086 361
93 3300026035 Ga0207703_10000927 Ga0207703_100009276 361
94 3300046660 Ga0495625_0000112 Ga0495625_0000112_11126_12220 361
95 3300053136 Ga0500559_0029724 Ga0500559_0029724_99_1190 361
96 3300045051 Ga0451576_0000041 Ga0451576_0000041_313282_314388 362
97 3300003759 Ga0055525_1000070 Ga0055525_1000070118 363
98 3300005577 Ga0068857_100005655 Ga0068857_10000565510 363
99 3300005616 Ga0068852_100000782 Ga0068852_10000078217 363
100 3300013307 Ga0157372_10011211 Ga0157372_100112119 363
101 3300025230 Ga0209563_100053 Ga0209563_10005378 363
102 3300026078 Ga0207702_10105820 Ga0207702_101058203 363
103 3300026116 Ga0207674_10094961 Ga0207674_100949613 363
104 3300026142 Ga0207698_10000287 Ga0207698_100002874 363
105 3300032002 Ga0307416_100126801 Ga0307416_1001268013 363
106 3300044842 Ga0466957_0022996 Ga0466957_0022996_97_1188 363
107 3300045976 Ga0466967_0115172 Ga0466967_0115172_129_1220 363
108 3300046660 Ga0495625_0000971 Ga0495625_0000971_4146_5240 363
109 3300053087 Ga0500643_002013 Ga0500643_002013_5662_6780 363
110 3300005327 Ga0070658_10012861 Ga0070658_100128612 364
111 3300005328 Ga0070676_10000029 Ga0070676_1000002910 364
112 3300005331 Ga0070670_100047581 Ga0070670_1000475812 364
113 3300005334 Ga0068869_100001320 Ga0068869_1000013202 364
114 3300005338 Ga0068868_100000139 Ga0068868_10000013934 364
115 3300005347 Ga0070668_100000028 Ga0070668_10000002826 364
116 3300005355 Ga0070671_100000750 Ga0070671_10000075016 364
117 3300005364 Ga0070673_100000013 Ga0070673_10000001329 364
118 3300005459 Ga0068867_100000009 Ga0068867_10000000997 364
119 3300005563 Ga0068855_100000040 Ga0068855_10000004027 364
120 3300005841 Ga0068863_100000092 Ga0068863_10000009287 364
121 3300005844 Ga0068862_100032356 Ga0068862_1000323565 364
122 3300006846 Ga0075430_100112331 Ga0075430_1001123312 364
123 3300006881 Ga0068865_100000005 Ga0068865_10000000514 364
124 3300009093 Ga0105240_10036606 Ga0105240_100366061 364
125 3300009098 Ga0105245_10015083 Ga0105245_100150836 364
126 3300009148 Ga0105243_10000032 Ga0105243_1000003229 364
127 3300009176 Ga0105242_10000166 Ga0105242_1000016623 364
128 3300009553 Ga0105249_10002730 Ga0105249_100027305 364
129 3300011119 Ga0105246_10032011 Ga0105246_100320114 364
130 3300013296 Ga0157374_10000134 Ga0157374_1000013450 364
131 3300013297 Ga0157378_10001179 Ga0157378_1000117914 364
132 3300013308 Ga0157375_10000242 Ga0157375_1000024229 364
133 3300014969 Ga0157376_10000111 Ga0157376_1000011125 364
134 3300025254 Ga0209148_1001664 Ga0209148_10016645 364
135 3300025272 Ga0209455_1001635 Ga0209455_10016353 364
136 3300025907 Ga0207645_10005071 Ga0207645_100050713 364
137 3300025909 Ga0207705_10002811 Ga0207705_100028119 364
138 3300025913 Ga0207695_10046092 Ga0207695_100460923 364
139 3300025925 Ga0207650_10017057 Ga0207650_100170573 364
140 3300025931 Ga0207644_10000094 Ga0207644_1000009442 364
141 3300025934 Ga0207686_10000250 Ga0207686_1000025015 364
142 3300025935 Ga0207709_10000051 Ga0207709_10000051211 364
143 3300025938 Ga0207704_10000001 Ga0207704_1000000129 364
144 3300025940 Ga0207691_10119932 Ga0207691_101199321 364
145 3300025942 Ga0207689_10000059 Ga0207689_1000005949 364
146 3300025949 Ga0207667_10000024 Ga0207667_1000002438 364
147 3300025949 Ga0207667_10127814 Ga0207667_101278142 364
148 3300025960 Ga0207651_10000006 Ga0207651_10000006210 364
149 3300025961 Ga0207712_10014548 Ga0207712_100145485 364
150 3300025972 Ga0207668_10001023 Ga0207668_1000102313 364
151 3300025981 Ga0207640_10101825 Ga0207640_101018251 364
152 3300026023 Ga0207677_10000251 Ga0207677_1000025113 364
153 3300026067 Ga0207678_10323754 Ga0207678_103237542 364
154 3300026088 Ga0207641_10000004 Ga0207641_10000004404 364
155 3300026089 Ga0207648_10000022 Ga0207648_10000022100 364
156 3300028381 Ga0268264_10002475 Ga0268264_100024755 364
157 3300039437 Ga0436365_0424287 Ga0436365_0424287_27_1127 364
158 3300047472 Ga0495686_0025783 Ga0495686_0025783_2395_3492 364
159 3300048925 Ga0496122_0003881 Ga0496122_0003881_8066_9160 364
160 3300048926 Ga0496123_0012184 Ga0496123_0012184_2511_3605 364
161 3300048927 Ga0496124_0026782 Ga0496124_0026782_3976_5070 364
162 3300049513 Ga0501290_000014 Ga0501290_000014_18493_19596 364
163 3300049515 Ga0501292_000015 Ga0501292_000015_54070_55173 364
164 3300049665 Ga0501227_024839 Ga0501227_024839_13_1116 364
165 3300049669 Ga0501235_015227 Ga0501235_015227_321_1424 364
166 3300049690 Ga0501261_000610 Ga0501261_000610_2534_3637 364
167 3300049775 Ga0501279_000015 Ga0501279_000015_54126_55229 364
168 3300049776 Ga0501280_000226 Ga0501280_000226_3608_4711 364
169 3300049779 Ga0501283_000737 Ga0501283_000737_1579_2682 364
170 3300002067 JGI24735J21928_10007583 JGI24735J21928_100075833 365
171 3300003214 JGI25165J46597_1000173 JGI25165J46597_100017366 365
172 3300005614 Ga0068856_100247033 Ga0068856_1002470332 365
173 3300013104 Ga0157370_10001083 Ga0157370_1000108326 365
174 3300013105 Ga0157369_10020711 Ga0157369_100207115 365
175 3300025231 Ga0207427_101262 Ga0207427_1012624 365
176 3300025250 Ga0209026_1002597 Ga0209026_10025977 365
177 3300025261 Ga0209233_1000003 Ga0209233_10000031255 365
178 3300026078 Ga0207702_10160187 Ga0207702_101601872 365
179 3300037418 Ga0395900_0069111 Ga0395900_0069111_55_1155 365
180 3300001989 JGI24739J22299_10004093 JGI24739J22299_100040932 366
181 3300001989 JGI24739J22299_10017245 JGI24739J22299_100172452 366
182 3300002067 JGI24735J21928_10006510 JGI24735J21928_100065101 366
183 3300005327 Ga0070658_10000774 Ga0070658_1000077423 366
184 3300005355 Ga0070671_100049964 Ga0070671_1000499643 366
185 3300005366 Ga0070659_100256970 Ga0070659_1002569702 366
186 3300005455 Ga0070663_100002178 Ga0070663_1000021787 366
187 3300005578 Ga0068854_100000419 Ga0068854_10000041914 366
188 3300005834 Ga0068851_10029462 Ga0068851_100294622 366
189 3300006237 Ga0097621_100165574 Ga0097621_1001655742 366
190 3300013100 Ga0157373_10009788 Ga0157373_100097882 366
191 3300013100 Ga0157373_10097263 Ga0157373_100972633 366
192 3300013307 Ga0157372_10043727 Ga0157372_100437272 366
193 3300025904 Ga0207647_10016927 Ga0207647_100169273 366
194 3300025909 Ga0207705_10000046 Ga0207705_1000004627 366
195 3300025911 Ga0207654_10064866 Ga0207654_100648663 366
196 3300025931 Ga0207644_10002878 Ga0207644_100028783 366
197 3300025933 Ga0207706_10010773 Ga0207706_100107737 366
198 3300025981 Ga0207640_10000031 Ga0207640_1000003127 366
199 3300026067 Ga0207678_10003572 Ga0207678_1000357212 366
200 3300026067 Ga0207678_10050590 Ga0207678_100505902 366
201 3300037471 Ga0395905_0021547 Ga0395905_0021547_4178_5278 366
202 3300038443 Ga0395901_0033174 Ga0395901_0033174_2290_3390 366
203 3300042005 Ga0439448_0000396 Ga0439448_0000396_504_1604 366
204 3300042005 Ga0439448_0002670 Ga0439448_0002670_1620_2720 366
205 3300042005 Ga0439448_0006889 Ga0439448_0006889_1529_2638 366
206 3300042012 Ga0439455_0000282 Ga0439455_0000282_1475_2575 366
207 3300042012 Ga0439455_0000589 Ga0439455_0000589_1905_3014 366
208 3300042157 Ga0439458_0001662 Ga0439458_0001662_3324_4424 366
209 3300044658 Ga0466972_0057532 Ga0466972_0057532_276_1379 366
210 3300044683 Ga0466965_0053324 Ga0466965_0053324_73_1200 366
211 3300044684 Ga0466966_0028828 Ga0466966_0028828_2397_3500 366
212 3300044765 Ga0466970_0001538 Ga0466970_0001538_6863_7966 366
213 3300048929 Ga0496126_0170285 Ga0496126_0170285_116_1216 366

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

26

90

0.86

PF01266

DAO

FAD dependent oxidoreductase

23

352

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sm8-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase in complex with an (n5) flavin adduct 0.9591 3 365
7rdf-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase y249f co-crystallized in the presence of d-arginine 0.959 4 363
3sm8-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase in complex with an (n5) flavin adduct 0.9515 3 365
7rdf-assembly1.cif.gz_A crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase y249f co-crystallized in the presence of d-arginine 0.9437 4 363
1uxj-assembly1.cif.gz_C-2 large improvement in the thermal stability of a tetrameric malate dehydrogenase by single point mutations at the dimer-dimer interface 0.9215 7 35
ID Description Score Start End Superfamily
3nycA02 Alpha Beta;2-Layer Sandwich;D-Amino Acid Oxidase; Chain A, domain 2;D-Amino Acid Oxidase, subunit A, domain 2 0.9198 79 300 3.30.9.10
1dljA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9082 7 35 3.40.50.720
3nycA02 Alpha Beta;2-Layer Sandwich;D-Amino Acid Oxidase; Chain A, domain 2;D-Amino Acid Oxidase, subunit A, domain 2 0.9082 79 300 3.30.9.10
af_P77399_309_494_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8878 7 36 3.40.50.720
af_F6P928_26_379_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8873 7 335 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A4V2BBT2-F1-model_v4 deleted 0.9771 188 365
AF-A0A7H0LE90-F1-model_v4 FAD-binding oxidoreductase 0.9763 4 365 GO:0005737
AF-A0A2E1Y9X0-F1-model_v4 FAD-dependent oxidoreductase 0.9758 5 365 GO:0005737
AF-A0A5A7NCK6-F1-model_v4 Putative FAD dependent oxidoreductase 0.9638 153 364 GO:0005737
AF-A0A7H0LE90-F1-model_v4 FAD-binding oxidoreductase 0.9631 4 365 GO:0005737

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pLDDT pTM Quality
94.55 0.92 High
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Predicted Structure (AlphaFold2)

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