F323446

General Info

Members Datasets Scaffolds Average Seq Length
212 150 424 223

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2527291627|2528203136
Length 260
Sequence PATQFSISVTWHTDTPYPEIRPRDLRRSARIGLPSTLVHVVILGCGRVGSALARSVERFGHSVAIIDQNPAAFGRLPQDFTGLRVTGMGFDRDTLIEAGIEQAAAFAAVSSGDNSNIIAARVAREMFGVERVVARIYDPRRAEVYERLGIPTVATVRWTRDQILDRLLPDAVTPQWSDPSGSVLLAAIPPGPAWVGRRIRELEESAGVRVACVTRFGEGVLPDARTLVQDGDVVHVAVTKAHASEADTVLRTGPDGKDSG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
3 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
7 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
8 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
74 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
85 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
86 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
87 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
88 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
109 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
112 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
124 2527291627 Frankia casuarinae Thr Isolate Nodule
125 2508501039 Frankia saprophytica CN3 Isolate Nodule
126 2517572101 Frankia sp. DC12 Isolate Nodule
127 2527291629 Frankia sp. BMG5.23 Isolate Nodule
128 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
129 2576861822 Frankia sp. CeD Isolate Nodule
130 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
131 2619618881 Frankia sp. ACN1ag Isolate Unclassified
132 2619619003 Frankia sp. CpI1-P Isolate Nodule
133 2626541554 Frankia sp. AvcI.1 Isolate Nodule
134 2671180195 Frankia sp. CcI49 Isolate Nodule
135 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
136 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
137 2684623036 Frankia sp. CgIM4 Isolate Nodule
138 2687453737 Frankia sp. BMG5.36 Isolate Nodule
139 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
140 2710264753 Frankia sp. KB5 Isolate Nodule
141 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
142 2773857922 Frankia sp. CcI49 Isolate Nodule
143 2773857924 Frankia sp. CgIS1 Isolate Nodule
144 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
145 637000116 Frankia casuarinae CcI3 Isolate Nodule
146 8002775197 Frankia nepalensis CN7 Isolate Nodule
147 8002784119 Frankia sp. AgB1.9 Isolate Nodule
148 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
149 8054920844 Frankia tisae Agncl-8 Isolate Nodule
150 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.85
Metatranscriptomes 1.42
Isolates 12.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.38
Nodule 10.38
Rhizoplane 5.66
Rhizosphere 64.62
Stem 0
Stem Tuber 0
Unclassified 0.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10215725 3300005327 Bacteria 1622
2 Ga0070684_100458362 3300005535 Bacteria 1179
3 Ga0070665_100540753 3300005548 Bacteria 1177
4 Ga0068855_100026722 3300005563 Bacteria 6906
5 Ga0068857_100579253 3300005577 Bacteria 1059
6 Ga0068859_100013883 3300005617 Bacteria 8079
7 Ga0068863_100000160 3300005841 Bacteria 71699
8 Ga0068858_100000019 3300005842 Bacteria 180988
9 Ga0068858_100036265 3300005842 Bacteria 4572
10 Ga0081455_10109916 3300005937 Bacteria 2193
11 Ga0070717_10114479 3300006028 Bacteria 2304
12 Ga0075365_10001783 3300006038 Bacteria 10040
13 Ga0075365_10032379 3300006038 Bacteria 3360
14 Ga0075368_10024584 3300006042 Bacteria 2308
15 Ga0075363_100060520 3300006048 Bacteria 2039
16 Ga0075364_10023744 3300006051 Bacteria 3885
17 Ga0075364_10042664 3300006051 Bacteria 2948
18 Ga0075364_10349925 3300006051 Bacteria 1007
19 Ga0075362_10000997 3300006177 Bacteria 8679
20 Ga0075367_10012485 3300006178 Bacteria 4532
21 Ga0075369_10021708 3300006186 Bacteria 2642
22 Ga0075370_10061932 3300006353 Bacteria 2132
23 Ga0075428_100077249 3300006844 Bacteria 3634
24 Ga0075428_100287350 3300006844 Bacteria 1769
25 Ga0075430_100026202 3300006846 Bacteria 4961
26 Ga0075430_100055198 3300006846 Bacteria 3341
27 Ga0075431_100094194 3300006847 Bacteria 3091
28 Ga0075431_100119486 3300006847 Bacteria 2719
29 Ga0075429_100101132 3300006880 Bacteria 2516
30 Ga0097620_100013883 3300006931 Bacteria 8079
31 Ga0111539_10008193 3300009094 Bacteria 13301
32 Ga0111539_10015718 3300009094 Bacteria 9405
33 Ga0111539_10218305 3300009094 Bacteria 2221
34 Ga0105247_10000188 3300009101 Bacteria 60322
35 Ga0105247_10001567 3300009101 Bacteria 16281
36 Ga0114129_10056277 3300009147 Bacteria 5509
37 Ga0114129_11019001 3300009147 Bacteria 1041
38 Ga0105248_10000405 3300009177 Bacteria 50013
39 Ga0105248_10019282 3300009177 Bacteria 7548
40 Ga0105237_10381252 3300009545 Bacteria 1415
41 Ga0105239_10911935 3300010375 Bacteria 1009
42 Ga0157369_10167487 3300013105 Bacteria 2316
43 Ga0163163_10183678 3300014325 Bacteria 2139
44 Ga0163163_11130303 3300014325 Bacteria 846
45 Ga0157379_10002176 3300014968 Bacteria 16300
46 Ga0157379_10049884 3300014968 Bacteria 3737
47 Ga0197907_10879981 3300020069 Bacteria 877
48 Ga0206353_10961292 3300020082 Bacteria 7331
49 Ga0224712_10092149 3300022467 Bacteria 1271
50 Ga0207710_10000038 3300025900 Bacteria 241794
51 Ga0207710_10000443 3300025900 Bacteria 26963
52 Ga0207647_10060574 3300025904 Bacteria 2313
53 Ga0207699_10552903 3300025906 Bacteria 835
54 Ga0207654_10156837 3300025911 Bacteria 1467
55 Ga0207671_10224239 3300025914 Bacteria 1473
56 Ga0207652_10588987 3300025921 Bacteria 998
57 Ga0207694_10076474 3300025924 Bacteria 2622
58 Ga0207687_10054175 3300025927 Bacteria 2805
59 Ga0207665_10032545 3300025939 Bacteria 3453
60 Ga0207711_10005899 3300025941 Bacteria 10346
61 Ga0207711_10018323 3300025941 Bacteria 5818
62 Ga0207667_10028652 3300025949 Bacteria 6046
63 Ga0207667_10431129 3300025949 Bacteria 1341
64 Ga0207651_10762780 3300025960 Bacteria 856
65 Ga0207703_10000036 3300026035 Bacteria 181013
66 Ga0207703_10012091 3300026035 Bacteria 6725
67 Ga0207702_10189261 3300026078 Bacteria 1900
68 Ga0207641_10008065 3300026088 Bacteria 8724
69 Ga0207674_10326410 3300026116 Bacteria 1484
70 Ga0207428_10020320 3300027907 Bacteria 5642
71 Ga0207428_10163245 3300027907 Bacteria 1691
72 Ga0268266_10453645 3300028379 Bacteria 1219
73 Ga0268266_10710834 3300028379 Bacteria 969
74 Ga0436364_1533906 3300037853 Bacteria 1395
75 Ga0451577_0000006 3300042876 Bacteria 709265
76 Ga0451577_0435753 3300042876 Unclassified 1190
77 Ga0466969_0057393 3300044656 Bacteria 1898
78 Ga0466972_0018149 3300044658 Bacteria 3519
79 Ga0466972_0111493 3300044658 Bacteria 1293
80 Ga0466972_0301672 3300044658 Bacteria 748
81 Ga0453683_0000019 3300044673 Bacteria 287249
82 Ga0466965_0295197 3300044683 Bacteria 878
83 Ga0466966_0278307 3300044684 Bacteria 1007
84 Ga0466961_0013312 3300044693 Bacteria 5266
85 Ga0466961_0017704 3300044693 Bacteria 4578
86 Ga0466963_0000558 3300044694 Bacteria 17542
87 Ga0466963_0137658 3300044694 Bacteria 1690
88 Ga0466963_0184869 3300044694 Bacteria 1455
89 Ga0466963_0222778 3300044694 Bacteria 1321
90 Ga0466963_0358310 3300044694 Bacteria 1027
91 Ga0466964_0006981 3300044706 Bacteria 4220
92 Ga0453684_0000037 3300044712 Bacteria 709327
93 Ga0466971_0001479 3300044719 Bacteria 9922
94 Ga0466970_0083816 3300044765 Bacteria 1725
95 Ga0466970_0187520 3300044765 Bacteria 1148
96 Ga0466957_0329472 3300044842 Bacteria 1032
97 Ga0466957_0563435 3300044842 Bacteria 795
98 Ga0466960_0019467 3300044901 Bacteria 2992
99 Ga0466959_0121970 3300045049 Bacteria 1852
100 Ga0466959_0238136 3300045049 Bacteria 1258
101 Ga0451576_0620462 3300045051 Bacteria 1136
102 Ga0466958_0021826 3300045836 Bacteria 3744
103 Ga0466958_0029133 3300045836 Bacteria 3275
104 Ga0466958_0039997 3300045836 Bacteria 2818
105 Ga0466967_0004508 3300045976 Bacteria 9412
106 Ga0466967_0010409 3300045976 Bacteria 6977
107 Ga0466967_0018354 3300045976 Bacteria 5587
108 Ga0466967_0215501 3300045976 Bacteria 1822
109 Ga0466967_0567341 3300045976 Bacteria 1118
110 Ga0495648_0022956 3300046524 Bacteria 4282
111 Ga0495613_0255777 3300046689 Bacteria 1221
112 Ga0495676_0103140 3300047321 Bacteria 2107
113 Ga0495680_0285599 3300047322 Bacteria 1162
114 Ga0496102_0032795 3300048905 Bacteria 4667
115 Ga0496102_0430652 3300048905 Bacteria 1239
116 Ga0496103_0310369 3300048906 Bacteria 1015
117 Ga0496104_0072075 3300048907 Bacteria 3285
118 Ga0496105_0300147 3300048908 Bacteria 1291
119 Ga0496110_0101147 3300048913 Bacteria 2584
120 Ga0496110_0464085 3300048913 Bacteria 1154
121 Ga0496111_0070836 3300048914 Bacteria 2537
122 Ga0496112_0406306 3300048915 Bacteria 1301
123 Ga0496114_0125677 3300048917 Bacteria 2211
124 Ga0496115_0174573 3300048918 Bacteria 1777
125 Ga0496116_0000599 3300048919 Bacteria 47850
126 Ga0496117_0045163 3300048920 Bacteria 3185
127 Ga0496117_0055926 3300048920 Bacteria 2753
128 Ga0496118_0011886 3300048921 Bacteria 8432
129 Ga0496118_0015418 3300048921 Bacteria 7074
130 Ga0496118_0060623 3300048921 Bacteria 2808
131 Ga0496118_0190661 3300048921 Bacteria 1226
132 Ga0496119_0002125 3300048922 Bacteria 22303
133 Ga0496119_0002646 3300048922 Bacteria 19402
134 Ga0496119_0017549 3300048922 Bacteria 5378
135 Ga0496119_0109727 3300048922 Bacteria 1533
136 Ga0496120_0000643 3300048923 Bacteria 51596
137 Ga0496121_0033626 3300048924 Bacteria 4635
138 Ga0496121_0050781 3300048924 Bacteria 3500
139 Ga0496126_0416879 3300048929 Bacteria 1086
140 Ga0501033_0212709 3300049570 Bacteria 1378
141 Ga0501040_0002526 3300049576 Bacteria 11800
142 Ga0501041_0018235 3300049577 Bacteria 4180
143 Ga0501042_0030187 3300049578 Bacteria 3827
144 Ga0501046_0001357 3300049580 Bacteria 23652
145 Ga0501047_0051495 3300049581 Bacteria 3979
146 Ga0501047_0427805 3300049581 Bacteria 1155
147 Ga0501048_0014198 3300049582 Bacteria 5900
148 Ga0501070_0051809 3300049586 Bacteria 3406
149 Ga0501071_0084253 3300049587 Bacteria 2330
150 Ga0501076_0002146 3300049592 Bacteria 13536
151 Ga0501079_0039726 3300049741 Bacteria 3629
152 Ga0501080_0216707 3300049742 Bacteria 1753
153 Ga0501080_0558522 3300049742 Bacteria 1019
154 Ga0501083_0071211 3300049744 Bacteria 2312
155 Ga0501044_0290223 3300049823 Bacteria 1567
156 Ga0501045_0000276 3300049824 Bacteria 29874
157 nmdc:mga03683_111395_c1 3300050489 Bacteria 1210
158 nmdc:mga03683_22062_c1 3300050489 Bacteria 2464
159 nmdc:mga03n38_106077_c1 3300050490 Bacteria 1362
160 nmdc:mga00v17_15694_c1 3300050491 Bacteria 4255
161 nmdc:mga00v17_692_c1 3300050491 Bacteria 15750
162 nmdc:mga0yw44_24238_c1 3300050492 Bacteria 3431
163 nmdc:mga0yw44_4351_c1 3300050492 Bacteria 6476
164 nmdc:mga0yw44_445373_c1 3300050492 Bacteria 877
165 nmdc:mga0yw44_4834_c1 3300050492 Bacteria 6258
166 nmdc:mga06z11_196325_c1 3300050494 Bacteria 1170
167 nmdc:mga06z11_8469_c1 3300050494 Bacteria 4290
168 nmdc:mga05p37_118781_c1 3300050507 Bacteria 3249
169 nmdc:mga09592_46537_c1 3300050508 Bacteria 3655
170 nmdc:mga0qj67_373470_c1 3300050509 Bacteria 1152
171 nmdc:mga0qj67_494002_c1 3300050509 Bacteria 984
172 nmdc:mga06r32_173089_c1 3300050510 Bacteria 2143
173 nmdc:mga06r32_175307_c1 3300050510 Bacteria 2128
174 nmdc:mga06r32_403014_c1 3300050510 Bacteria 1350
175 nmdc:mga06r32_7420_c1 3300050510 Bacteria 9864
176 nmdc:mga08y16_19014_c1 3300050511 Bacteria 7235
177 nmdc:mga08y16_39105_c1 3300050511 Bacteria 4978
178 Ga0495619_0185188 3300053085 Bacteria 1441
179 Ga0501084_0000276 3300054114 Bacteria 38787
180 Ga0501084_0045998 3300054114 Bacteria 3654
181 Ga0590077_017719 3300059426 Bacteria 1500
182 Ga0501082_0062106 3300060353 Bacteria 3215
183 Ga0466962_0022858 3300061719 Bacteria 3004
184 Ga0466962_0186167 3300061719 Bacteria 1013
185 Ga0530510_0008375 3300061734 Bacteria 7207
186 2528203136 2527291627 Bacteria 5309833
187 2508675860 2508501039 Bacteria 9978592
188 2517763803 2517572101 Bacteria 6884336
189 2528215421 2527291629 Bacteria 5267418
190 2546950680 2546825537 Bacteria 5389291
191 2579748097 2576861822 Bacteria 5004595
192 2579857073 2579778521 Bacteria 7624758
193 2619853983 2619618881 Bacteria 7521104
194 2620352984 2619619003 Bacteria 7619552
195 2626638333 2626541554 Bacteria 7741902
196 2671832850 2671180195 Bacteria 9757215
197 2676200972 2675902999 Bacteria 9438463
198 2686535975 2684623035 Bacteria 8032739
199 2686543944 2684623036 Bacteria 5199090
200 2689962747 2687453737 Bacteria 11203906
201 2689991169 2687453743 Bacteria 8361025
202 2710604522 2710264753 Bacteria 5455564
203 2774845548 2773857921 Bacteria 9435764
204 2774851006 2773857922 Bacteria 9757215
205 2774866635 2773857924 Bacteria 5256821
206 2895887174 2895880812 Bacteria 11255272
207 637878656 637000116 Bacteria 5433628
208 8002783813 8002775197 Bacteria 10728764
209 8002786632 8002784119 Bacteria 9788632
210 8054920191 8054913762 Bacteria 7713009
211 8054924858 8054920844 Bacteria 7068637
212 8055160135 8055157932 Bacteria 6429399
213 Ga0070658_10215725
214 Ga0070684_100458362
215 Ga0070665_100540753
216 Ga0068855_100026722
217 Ga0068857_100579253
218 Ga0068859_100013883
219 Ga0068863_100000160
220 Ga0068858_100000019
221 Ga0068858_100036265
222 Ga0081455_10109916
223 Ga0070717_10114479
224 Ga0075365_10001783
225 Ga0075365_10032379
226 Ga0075368_10024584
227 Ga0075363_100060520
228 Ga0075364_10023744
229 Ga0075364_10042664
230 Ga0075364_10349925
231 Ga0075362_10000997
232 Ga0075367_10012485
233 Ga0075369_10021708
234 Ga0075370_10061932
235 Ga0075428_100077249
236 Ga0075428_100287350
237 Ga0075430_100026202
238 Ga0075430_100055198
239 Ga0075431_100094194
240 Ga0075431_100119486
241 Ga0075429_100101132
242 Ga0097620_100013883
243 Ga0111539_10008193
244 Ga0111539_10015718
245 Ga0111539_10218305
246 Ga0105247_10000188
247 Ga0105247_10001567
248 Ga0114129_10056277
249 Ga0114129_11019001
250 Ga0105248_10000405
251 Ga0105248_10019282
252 Ga0105237_10381252
253 Ga0105239_10911935
254 Ga0157369_10167487
255 Ga0163163_10183678
256 Ga0163163_11130303
257 Ga0157379_10002176
258 Ga0157379_10049884
259 Ga0197907_10879981
260 Ga0206353_10961292
261 Ga0224712_10092149
262 Ga0207710_10000038
263 Ga0207710_10000443
264 Ga0207647_10060574
265 Ga0207699_10552903
266 Ga0207654_10156837
267 Ga0207671_10224239
268 Ga0207652_10588987
269 Ga0207694_10076474
270 Ga0207687_10054175
271 Ga0207665_10032545
272 Ga0207711_10005899
273 Ga0207711_10018323
274 Ga0207667_10028652
275 Ga0207667_10431129
276 Ga0207651_10762780
277 Ga0207703_10000036
278 Ga0207703_10012091
279 Ga0207702_10189261
280 Ga0207641_10008065
281 Ga0207674_10326410
282 Ga0207428_10020320
283 Ga0207428_10163245
284 Ga0268266_10453645
285 Ga0268266_10710834
286 Ga0436364_1533906
287 Ga0451577_0000006
288 Ga0451577_0435753
289 Ga0466969_0057393
290 Ga0466972_0018149
291 Ga0466972_0111493
292 Ga0466972_0301672
293 Ga0453683_0000019
294 Ga0466965_0295197
295 Ga0466966_0278307
296 Ga0466961_0013312
297 Ga0466961_0017704
298 Ga0466963_0000558
299 Ga0466963_0137658
300 Ga0466963_0184869
301 Ga0466963_0222778
302 Ga0466963_0358310
303 Ga0466964_0006981
304 Ga0453684_0000037
305 Ga0466971_0001479
306 Ga0466970_0083816
307 Ga0466970_0187520
308 Ga0466957_0329472
309 Ga0466957_0563435
310 Ga0466960_0019467
311 Ga0466959_0121970
312 Ga0466959_0238136
313 Ga0451576_0620462
314 Ga0466958_0021826
315 Ga0466958_0029133
316 Ga0466958_0039997
317 Ga0466967_0004508
318 Ga0466967_0010409
319 Ga0466967_0018354
320 Ga0466967_0215501
321 Ga0466967_0567341
322 Ga0495648_0022956
323 Ga0495613_0255777
324 Ga0495676_0103140
325 Ga0495680_0285599
326 Ga0496102_0032795
327 Ga0496102_0430652
328 Ga0496103_0310369
329 Ga0496104_0072075
330 Ga0496105_0300147
331 Ga0496110_0101147
332 Ga0496110_0464085
333 Ga0496111_0070836
334 Ga0496112_0406306
335 Ga0496114_0125677
336 Ga0496115_0174573
337 Ga0496116_0000599
338 Ga0496117_0045163
339 Ga0496117_0055926
340 Ga0496118_0011886
341 Ga0496118_0015418
342 Ga0496118_0060623
343 Ga0496118_0190661
344 Ga0496119_0002125
345 Ga0496119_0002646
346 Ga0496119_0017549
347 Ga0496119_0109727
348 Ga0496120_0000643
349 Ga0496121_0033626
350 Ga0496121_0050781
351 Ga0496126_0416879
352 Ga0501033_0212709
353 Ga0501040_0002526
354 Ga0501041_0018235
355 Ga0501042_0030187
356 Ga0501046_0001357
357 Ga0501047_0051495
358 Ga0501047_0427805
359 Ga0501048_0014198
360 Ga0501070_0051809
361 Ga0501071_0084253
362 Ga0501076_0002146
363 Ga0501079_0039726
364 Ga0501080_0216707
365 Ga0501080_0558522
366 Ga0501083_0071211
367 Ga0501044_0290223
368 Ga0501045_0000276
369 nmdc:mga03683_111395_c1
370 nmdc:mga03683_22062_c1
371 nmdc:mga03n38_106077_c1
372 nmdc:mga00v17_15694_c1
373 nmdc:mga00v17_692_c1
374 nmdc:mga0yw44_24238_c1
375 nmdc:mga0yw44_4351_c1
376 nmdc:mga0yw44_445373_c1
377 nmdc:mga0yw44_4834_c1
378 nmdc:mga06z11_196325_c1
379 nmdc:mga06z11_8469_c1
380 nmdc:mga05p37_118781_c1
381 nmdc:mga09592_46537_c1
382 nmdc:mga0qj67_373470_c1
383 nmdc:mga0qj67_494002_c1
384 nmdc:mga06r32_173089_c1
385 nmdc:mga06r32_175307_c1
386 nmdc:mga06r32_403014_c1
387 nmdc:mga06r32_7420_c1
388 nmdc:mga08y16_19014_c1
389 nmdc:mga08y16_39105_c1
390 Ga0495619_0185188
391 Ga0501084_0000276
392 Ga0501084_0045998
393 Ga0590077_017719
394 Ga0501082_0062106
395 Ga0466962_0022858
396 Ga0466962_0186167
397 Ga0530510_0008375
398 2528203136
399 2508675860
400 2517763803
401 2528215421
402 2546950680
403 2579748097
404 2579857073
405 2619853983
406 2620352984
407 2626638333
408 2671832850
409 2676200972
410 2686535975
411 2686543944
412 2689962747
413 2689991169
414 2710604522
415 2774845548
416 2774851006
417 2774866635
418 2895887174
419 637878656
420 8002783813
421 8002786632
422 8054920191
423 8054924858
424 8055160135

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02254

TrkA_N

TrkA-N domain

40

156

0.96

PF02080

TrkA_C

TrkA-C domain

183

251

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4czz-assembly1.cif.gz_A histone demethylase lsd1(kdm1a)-corest3 complex 0.9955 2 31
7exs-assembly1.cif.gz_A thermomicrobium roseum sarcosine oxidase mutant - s320r 0.9878 1 33
4j31-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase (kmo-396prot) 0.9854 2 31
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9849 1 31
7xe3-assembly1.cif.gz_A crystal structure of lsd2 in complex with cis-4-br-2,5-f2-pcpa (s1024) 0.9848 2 32
ID Description Score Start End Superfamily
af_Q8VYV2_23_370_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9929 4 31 3.50.50.60
af_Q54US8_49_419_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9925 3 31 3.50.50.60
af_P77337_1_424_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9873 2 31 3.50.50.60
1naaA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9869 3 31 3.50.50.60
af_Q4CKY6_1_262_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9855 1 31 3.50.50.60
ID Description Score Start End GO Terms
AF-T0Z6L3-F1-model_v4 TrkA-N domain protein 0.9859 6 119 GO:0005886
GO:0015079
AF-A0A2M8NK00-F1-model_v4 Potassium transporter TrkA 0.9737 2 81 GO:0005886
GO:0015079
AF-X1INN7-F1-model_v4 RCK N-terminal domain-containing protein 0.9675 5 91 GO:0005886
GO:0015079
AF-A0A5J4PKC0-F1-model_v4 Trk system potassium uptake protein TrkA 0.96 1 88 GO:0005886
GO:0015079
AF-A0A7X5WSC8-F1-model_v4 Trk system potassium transporter TrkA 0.9547 6 103 GO:0005886
GO:0015079

Map