Scaffold Information

Sample ID 3300005842
Scaffold Ga0068858_100000019
Sample Name Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2
Length 180988
Fam Num 9
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces

CRISPR Details

Start Coordinate: 133315 End Coordinate: 160074
Position Repeat Spacer
133315 TCCCTCCAGGGATGATCAGAGAC CTGATCTCAGCTTGCGTCGGGGACCCTGTGCCCGGCGTGTTTCGA
133383 TTCCTACAGGGATGATCAGCGAC ATTACCCGGCAGCAGGCCGCCGCCTGCACCGTGTTCGCGTTTTGA
133451 TCCCCCCAGGGATGATCACAGAC CTAGCCGGTCGGAAGATCCTGATCTGCGGAAACCAGTTGCGAT
133517 TCCCTCCAGAGATGATCACGGAC GCGATCGCCTGCCATGCCGTCGAGGTAATCCGTTCCTGTTTCGG
133584 TCCCTCCAGGGATGATCACGGAC ACGGTGGCGGCGTTGGCGGGCAGTGTGCTCATGAGTTTCGA
133648 TCCCTAAAGGGATGATCACGGAC CATTCCGCGCCCCAGCGCCGACCGCGACCCGGGA
133705 TCCCTGCAGGGATGATCGCGGAC ACGCAGGCGGCGCCGACGCAGCCACGGCGCACTCGTTTCGA
133769 TCCCTCCGGGGATGATCGCGGAC TCTGGCGCTGAGGGAGTTGACCGAGCTCCAAGCCGGTTTCGA
133834 TCCCTCTAGGGATGATCGCGGAC CCAAGCGCGACGCTTGGAGCACTGCTGACCAAGCTGGGGCGGTTTCGA
133905 TCCCTCCAGGGATGATCACGGAC GGGAGTTGCGGGAGGCGTGCGCCGGAGGCATCGCCGCTATGTTTCGA
133975 TCCCTCCAGGGATGATCAGCGAC CCAGATCGGGGCCCCGTTCCCCGCGTGGAAGCCAACGTTTCGA
134041 TCCCTCCAGGGATGATCAGCGAC CCGCGACCGTCGAAGAACGGATGGTCCTACTGGGACGAGGTTTCGA
134110 TCCCTCCAGGGATGATCAGCGAC AGGCCGAACAGGACCATCGCGGGGACGGCCATGCCAGCGTTTCGA
134178 TCCCTCCAGGGATGATCAGCGAC CGGGTGCTCGCCGGGACGCCTACTGGGCCTCTCCGTGTTTCGA
134244 TCCCTCCAGGGATGATCAGCGAC TCGCCGGGGCATGTCGCCGACCACAACTCGATCGTGTTTCGA
134309 TCCCTCCAGGGATGATCAGCGAC CTGATCTCGTAGAGCTTCGCGGCGATTGTGTGGTGCTCGTGTTTCGA
134379 TCCCTCCAGGGATGATCAGCGAC CACGGGATGTGGATTGGCCAACCGATGCGGAACGTGCGTTTCGA
134446 TCCCTCCAGGGATGATCAGCGAC ACGCTGGGCCCGGACCCCTACGCCCACGAGATCAAGTTTCGA
134511 TCCCTCCAGGGATGATCAGCGAC GCGCCGCGCTGCGGTGTGGACCTCGTGGACGGGGTCCCGGTTTCGA
134580 TCCCTCCAGGGATGATCAGCGAC GCAGCGTGTCGATCGCGGTGTTGCTGACCTGCGTCCAGGTTTCGA
134648 TCCCTCCAGGGATGATCAGCGAC CACGGTGCGTGCTGCGTGGTGCGTGGTGCGTGGTCAGGGTTTCGA
134716 TCCCTCCAGGGATGATCAGCGAC TAGCCATCTGGGCCGTGGTCGTCGCCGACAAGAAGCCCTGTTTCGA
134785 TCCCTCCAGGGATGATCAGCGAC GCCACCGCAATGACCGTCGACCGGCTCTACGCCGGCCTGTTTCGA
134853 TCCCTCCAGGGATGATCAGCGAC CCGTGACCGAGCGGATCACGTCGCGGCCGGCGACGCCCGCGTTTCGA
134923 TCCCTCCAGGGATGATCAGCGAC -
159317 GTTTCGATCCCTGCAGGGATGATCACGAAC CGGCGGCCAATCACCCTAAACACGACACGCGCCGC
159382 GTTTCGATCCCTCCAGGGTGATCAGCGACC TGCGGTGGATGGCCTCGTCGCCCCCGCCCCTAGG
159446 GTTTCGATCCCTCTAGGGATGATCAGCGAC GAGAGACGCGCTCGACCCGGCCGCCGCGCCACT
159509 GTTTCGATCCCTCCAGGGATGATCAGCGAC GGGAGGGCGTGGAGAACACCCTGTACGGCGGGGAGGG
159576 GTTTCGATCCCTCCAGGGATGATCAGCGAC TTCTCTACGGTTTGGGCGTCGGCGCGGCGGCTTCCG
159642 GTTTCGATCCCTCCAGGGATGATCAGCGAC AGTTCCACAGCGTCTGGTCGTGCGTGCGCACCGCCGCCG
159711 GTTTCGATCCCTCCAGGGATGATCAGCGAC TGGGCCTGCAATACGTGCCCTCGCGGTCGCCCTCGT
159777 GTTTCGATCCCTCCAGGGATGATCAGCGAC TCGCGACAGGCGGGGTCACGCTGTGGACGGCGGCGAA
159844 GTTTCGATCCCTCCAGGGATGATCAGCGAC CGGCTGCGATGACGGCCGCGCGACTCCAGGCCGAGCTCGG
159914 GTTTCGATCCCTCCAGGGATGATCAGCGAC TTGCGTCTCGAAGGGGCGCCGCGGCGCCGATACGT
159979 GTTTCGATCCCTCCAGGGATGATCAGCGAC TGATCGTCCAAGGAGGAGATCGAACATGACTCTCA
160044 GTTTCGATCCCTCCAGGGATGATCAGCGAC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F174689 , F310114 , F323446 , F426449 , F454120 , F460972 , F480142 , F491422 , F494137