F323363

General Info

Members Datasets Scaffolds Average Seq Length
212 184 150 463

Family's Representative Sequence

Representative Sequence 3300049705|Ga0501225_0003788|Ga0501225_0003788_2733_4244
Length 503
Sequence VYCGVRPRAACALAACRWAQDRGSSHTHAATATLAIEGLPAAGTQERSVTPTTASPNAPLRLREKVGYGIGDMGFNFYWANISSFLLIFYTDVMGLAAGAVGTMILVTKIIDAITDPMMGAIADRTRTRFGKFRPYLLYAALPMAVTGVLTYTVPDVEGGARLLWGYVTFSLMMLAYTVLSTPYSALSGVITGDSQQRTTLISFRFIAAFAGTAIVNYCTLDLVAWLGRGDEPLGWQLTMAVYGVAAAALFITVFLTTRERIAPPPLQNSGVRQDMKDLLNNKAWLVLFALALIIMVTIVMRGGASVYYMKYFVQRPDLTGKFLGVYSVALAVGAAITPLLTRHIDKKRLMVVLMATVGVLSCAMFFVPADAIATMFVLNTLIGLALGPKSPLAFSMYADTADYTEWKMGRRATAMTFAAATFSQKLGGAIASAVIAWMLAGMGYVANQAQSDASQLGIVLLLTVIPGAVAFAAAFTMRYYPLDNARLAQVQSELLARKAAQP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
3 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
4 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
5 2554235283 Bacillus safensis VK Isolate Rhizosphere
6 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
7 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
8 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
9 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
10 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
11 2643221656 Pelomonas sp. Root405 Isolate Unclassified
12 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
13 2643221735 Bacillus sp. Root920 Isolate Unclassified
14 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
15 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
16 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
17 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
18 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
19 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
20 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
21 2738543010 Bacillus sp. YR335 Isolate Unclassified
22 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
23 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
24 2811994870 Bacillus sp. JB4 Isolate Unclassified
25 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
26 2818991457 Xanthomonas translucens 569 Isolate Unclassified
27 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
28 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
29 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
30 2860837431 Bacillus sp. WR11 Isolate Unclassified
31 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
32 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
33 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
34 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
35 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
36 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
37 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
38 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
39 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
40 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
41 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
42 2919513703 Luteimonas sp. 3794 Isolate Unclassified
43 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
44 2919675420 Luteimonas terrae 4099 Isolate Unclassified
45 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
46 2919726948 Bacillus pumilus 4489 Isolate Unclassified
47 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
48 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
49 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
50 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
51 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
52 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
53 2969141011 Bacillus velezensis MH25 Isolate Unclassified
54 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
55 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
56 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
57 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
58 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
59 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
60 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
61 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
62 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
63 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
64 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
65 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
66 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
67 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
68 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
69 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
70 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
71 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
72 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
73 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
74 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
75 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
78 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
79 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
80 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
81 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
82 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
83 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
84 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
85 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
86 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
87 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
88 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
89 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
90 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
91 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
92 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
93 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
94 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
95 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
96 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
97 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
98 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
99 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
100 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
101 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
102 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
103 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
104 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
105 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
106 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
108 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
130 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
133 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
134 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
135 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
136 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
137 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
138 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
139 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
140 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
141 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
142 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
143 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
144 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
147 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
148 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
149 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
150 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
151 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
157 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
158 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
159 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
160 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
161 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
162 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
163 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
175 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
178 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
179 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
180 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
181 8022653035 Bacillus sp. Rc4 Isolate Unclassified
182 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
183 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
184 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.28
Metatranscriptomes 0.47
Isolates 29.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.77
Nodule 0.94
Rhizoplane 0.47
Rhizosphere 74.06
Stem 0
Stem Tuber 0
Unclassified 20.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1841006 2162886007 Bacteria 2508
2 JGI25151J46595_10000029 3300003187 Bacteria 205878
3 rootL2_10033201 3300003322 Bacteria 17241
4 Ga0006562J51391_1010153 3300003578 Bacteria 5500
5 Ga0065714_10077060 3300005288 Bacteria 2726
6 Ga0065704_10070456 3300005289 Bacteria 24111
7 Ga0065704_10103591 3300005289 Bacteria 2167
8 Ga0070676_10000736 3300005328 Bacteria 16050
9 Ga0070670_100001779 3300005331 Bacteria 17547
10 Ga0070670_100095054 3300005331 Bacteria 2563
11 Ga0070677_10037498 3300005333 Bacteria 1891
12 Ga0068869_100043140 3300005334 Bacteria 3238
13 Ga0070666_10000474 3300005335 Bacteria 24278
14 Ga0068868_100002213 3300005338 Bacteria 13436
15 Ga0070668_100000876 3300005347 Bacteria 20916
16 Ga0070669_100102565 3300005353 Bacteria 2160
17 Ga0070673_100001104 3300005364 Bacteria 15457
18 Ga0070667_100000588 3300005367 Bacteria 35773
19 Ga0070678_100028079 3300005456 Bacteria 3831
20 Ga0070662_100013007 3300005457 Bacteria 5531
21 Ga0068853_100194046 3300005539 Bacteria 1846
22 Ga0070672_100000511 3300005543 Bacteria 22741
23 Ga0070665_100001321 3300005548 Bacteria 29603
24 Ga0068852_100036451 3300005616 Bacteria 4115
25 Ga0068864_100002120 3300005618 Bacteria 16404
26 Ga0068851_10000384 3300005834 Bacteria 20008
27 Ga0068863_100001340 3300005841 Bacteria 24519
28 Ga0068863_100010579 3300005841 Bacteria 8956
29 Ga0068858_100004360 3300005842 Bacteria 13883
30 Ga0068860_100010963 3300005843 Bacteria 8936
31 Ga0097621_100002596 3300006237 Bacteria 12380
32 Ga0075370_10052584 3300006353 Bacteria 2311
33 Ga0068871_100001314 3300006358 Bacteria 16613
34 Ga0079104_1002118 3300006946 Bacteria 11315
35 Ga0105251_10000008 3300009011 Bacteria 213669
36 Ga0105245_10061252 3300009098 Unclassified 3392
37 Ga0105247_10011626 3300009101 Bacteria 5302
38 Ga0105243_10265831 3300009148 Unclassified 1538
39 Ga0105237_10028640 3300009545 Bacteria 5671
40 Ga0105237_10161485 3300009545 Unclassified 2239
41 Ga0105249_10006322 3300009553 Bacteria 10293
42 Ga0105249_10013052 3300009553 Bacteria 7334
43 Ga0157371_10033502 3300013102 Bacteria 3690
44 Ga0157370_10181005 3300013104 Bacteria 1959
45 Ga0157374_10007850 3300013296 Bacteria 9111
46 Ga0157378_10088295 3300013297 Bacteria 2813
47 Ga0157378_10118644 3300013297 Bacteria 2435
48 Ga0163162_10099258 3300013306 Bacteria 3002
49 Ga0157372_10344807 3300013307 Bacteria 1735
50 Ga0157375_10007963 3300013308 Bacteria 9277
51 Ga0157375_10058818 3300013308 Bacteria 3804
52 Ga0157375_10309928 3300013308 Bacteria 1743
53 Ga0163163_10003420 3300014325 Bacteria 13486
54 Ga0157380_10048083 3300014326 Unclassified 3358
55 Ga0157380_10201864 3300014326 Bacteria 1765
56 Ga0157376_10002660 3300014969 Bacteria 12140
57 Ga0157376_10119695 3300014969 Unclassified 2332
58 Ga0182005_1009028 3300015265 Bacteria 2920
59 Ga0209147_104778 3300025229 Bacteria 2166
60 Ga0209025_1000001 3300025294 Bacteria 1888151
61 Ga0207713_1000170 3300025735 Bacteria 94864
62 Ga0207680_10007891 3300025903 Bacteria 5203
63 Ga0207645_10005589 3300025907 Bacteria 9089
64 Ga0207705_10003352 3300025909 Bacteria 12176
65 Ga0207671_10101703 3300025914 Bacteria 2178
66 Ga0207650_10032686 3300025925 Bacteria 3764
67 Ga0207650_10106928 3300025925 Bacteria 2161
68 Ga0207706_10009997 3300025933 Bacteria 8694
69 Ga0207709_10006402 3300025935 Bacteria 6607
70 Ga0207691_10003993 3300025940 Bacteria 14317
71 Ga0207689_10094316 3300025942 Bacteria 2458
72 Ga0207651_10000857 3300025960 Bacteria 13286
73 Ga0207712_10005646 3300025961 Bacteria 7890
74 Ga0207668_10001121 3300025972 Bacteria 15969
75 Ga0207658_10001753 3300025986 Bacteria 16330
76 Ga0207677_10001454 3300026023 Bacteria 12547
77 Ga0207703_10035086 3300026035 Unclassified 3985
78 Ga0207639_10015321 3300026041 Bacteria 5407
79 Ga0207639_10097283 3300026041 Bacteria 2370
80 Ga0207641_10000854 3300026088 Bacteria 32297
81 Ga0207641_10013746 3300026088 Bacteria 6640
82 Ga0207641_10014517 3300026088 Bacteria 6456
83 Ga0207641_10113736 3300026088 Bacteria 2404
84 Ga0207648_10012958 3300026089 Bacteria 7784
85 Ga0207676_10005271 3300026095 Bacteria 9152
86 Ga0207674_10028772 3300026116 Bacteria 5860
87 Ga0209281_1004904 3300027111 Bacteria 3861
88 Ga0209371_1000156 3300027312 Bacteria 106826
89 Ga0209371_1006573 3300027312 Bacteria 4271
90 Ga0268264_10016384 3300028381 Bacteria 6068
91 Ga0265323_10000572 3300028653 Bacteria 20311
92 Ga0307515_10032064 3300028794 Bacteria 8726
93 Ga0268256_1000130 3300030500 Bacteria 106825
94 Ga0268256_1006623 3300030500 Bacteria 4271
95 Ga0265316_10001082 3300031344 Bacteria 29478
96 Ga0307513_10003869 3300031456 Bacteria 20143
97 Ga0307513_10009665 3300031456 Bacteria 12182
98 Ga0307408_100000010 3300031548 Bacteria 420048
99 Ga0316576_10017746 3300031727 Bacteria 4844
100 Ga0316576_10103686 3300031727 Bacteria 2128
101 Ga0307413_10028359 3300031824 Bacteria 3117
102 Ga0307414_10000278 3300032004 Bacteria 30536
103 Ga0307414_10003184 3300032004 Bacteria 8725
104 Ga0307414_10011888 3300032004 Bacteria 5127
105 Ga0373939_0000795 3300035114 Bacteria 7781
106 Ga0316574_0015336 3300035398 Bacteria 4445
107 Ga0316574_0058571 3300035398 Bacteria 2413
108 Ga0373931_0000202 3300035691 Bacteria 25226
109 Ga0316584_0047893 3300036712 Bacteria 3194
110 Ga0395905_0116686 3300037471 Bacteria 2509
111 Ga0237819_00123 3300038705 Bacteria 28958
112 Ga0451853_1099871 3300041512 Bacteria 1540
113 Ga0439449_0027132 3300042007 Bacteria 2138
114 Ga0439434_0018160 3300042435 Bacteria 2104
115 Ga0451577_0035231 3300042876 Bacteria 4509
116 Ga0453683_0034143 3300044673 Bacteria 3207
117 Ga0453684_0005341 3300044712 Bacteria 25594
118 Ga0453684_0005834 3300044712 Bacteria 23956
119 Ga0453684_0007470 3300044712 Bacteria 20069
120 Ga0453684_0046040 3300044712 Bacteria 5810
121 Ga0453684_0097854 3300044712 Bacteria 3600
122 Ga0451576_0013189 3300045051 Bacteria 9248
123 Ga0495627_010540 3300046453 Bacteria 3355
124 Ga0495629_0153352 3300046459 Bacteria 1601
125 Ga0495632_0040672 3300046519 Bacteria 2340
126 Ga0495663_0000504 3300046525 Bacteria 14099
127 Ga0495654_0033078 3300046530 Bacteria 2618
128 Ga0495586_0061415 3300046535 Bacteria 2045
129 Ga0495635_0154662 3300046663 Bacteria 1561
130 Ga0495671_0053661 3300046692 Bacteria 2000
131 Ga0495660_0064103 3300046810 Bacteria 1965
132 Ga0495672_0015522 3300047320 Bacteria 5166
133 Ga0496109_0014815 3300048912 Bacteria 6785
134 Ga0496116_0063900 3300048919 Bacteria 2369
135 Ga0496117_0002650 3300048920 Bacteria 22181
136 Ga0496119_0003154 3300048922 Bacteria 17321
137 Ga0496120_0001120 3300048923 Bacteria 34756
138 Ga0496122_0000361 3300048925 Bacteria 97861
139 Ga0496123_0000366 3300048926 Bacteria 84678
140 Ga0496123_0053297 3300048926 Bacteria 2674
141 Ga0496126_0000108 3300048929 Bacteria 197529
142 Ga0496126_0022037 3300048929 Bacteria 6208
143 Ga0501034_0166005 3300049571 Bacteria 2176
144 Ga0501046_0008126 3300049580 Bacteria 9167
145 Ga0501225_0003788 3300049705 Bacteria 4544
146 Ga0501267_001703 3300049764 Bacteria 1913
147 nmdc:mga00v17_10011_c1 3300050491 Bacteria 5159
148 nmdc:mga0k408_59855_c1 3300050493 Bacteria 2213
149 nmdc:mga07m45_2340_c1 3300050496 Bacteria 8889
150 Ga0500634_0007932 3300053161 Bacteria 5272

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0005341 Ga0453684_0005341_18_1289 366
2 3300046535 Ga0495586_0061415 Ga0495586_0061415_37_1320 379
3 3300028653 Ga0265323_10000572 Ga0265323_100005722 414
4 3300031344 Ga0265316_10001082 Ga0265316_1000108218 414
5 3300013297 Ga0157378_10088295 Ga0157378_100882951 416
6 3300027312 Ga0209371_1006573 Ga0209371_10065732 416
7 3300030500 Ga0268256_1006623 Ga0268256_10066232 416
8 3300013296 Ga0157374_10007850 Ga0157374_100078506 420
9 3300026089 Ga0207648_10012958 Ga0207648_100129585 420
10 3300028381 Ga0268264_10016384 Ga0268264_100163842 420
11 3300048912 Ga0496109_0014815 Ga0496109_0014815_5325_6770 420
12 3300031727 Ga0316576_10017746 Ga0316576_100177462 421
13 3300035398 Ga0316574_0058571 Ga0316574_0058571_151_1506 423
14 3300035398 Ga0316574_0015336 Ga0316574_0015336_1209_2564 425
15 3300044712 Ga0453684_0007470 Ga0453684_0007470_17303_18757 425
16 3300005539 Ga0068853_100194046 Ga0068853_1001940462 429
17 3300026041 Ga0207639_10097283 Ga0207639_100972832 429
18 3300005328 Ga0070676_10000736 Ga0070676_100007365 430
19 3300005334 Ga0068869_100043140 Ga0068869_1000431402 430
20 3300005335 Ga0070666_10000474 Ga0070666_1000047417 430
21 3300005338 Ga0068868_100002213 Ga0068868_1000022132 430
22 3300005347 Ga0070668_100000876 Ga0070668_1000008768 430
23 3300005364 Ga0070673_100001104 Ga0070673_1000011048 430
24 3300005367 Ga0070667_100000588 Ga0070667_10000058826 430
25 3300005457 Ga0070662_100013007 Ga0070662_1000130072 430
26 3300005543 Ga0070672_100000511 Ga0070672_1000005112 430
27 3300005548 Ga0070665_100001321 Ga0070665_1000013216 430
28 3300005618 Ga0068864_100002120 Ga0068864_1000021209 430
29 3300005834 Ga0068851_10000384 Ga0068851_1000038415 430
30 3300005841 Ga0068863_100001340 Ga0068863_1000013405 430
31 3300005842 Ga0068858_100004360 Ga0068858_1000043608 430
32 3300005843 Ga0068860_100010963 Ga0068860_1000109632 430
33 3300006237 Ga0097621_100002596 Ga0097621_1000025965 430
34 3300006358 Ga0068871_100001314 Ga0068871_1000013149 430
35 3300009098 Ga0105245_10061252 Ga0105245_100612523 430
36 3300009101 Ga0105247_10011626 Ga0105247_100116264 430
37 3300009148 Ga0105243_10265831 Ga0105243_102658311 430
38 3300009545 Ga0105237_10161485 Ga0105237_101614852 430
39 3300009553 Ga0105249_10013052 Ga0105249_100130523 430
40 3300013297 Ga0157378_10118644 Ga0157378_101186442 430
41 3300014325 Ga0163163_10003420 Ga0163163_100034209 430
42 3300014969 Ga0157376_10002660 Ga0157376_100026602 430
43 3300025903 Ga0207680_10007891 Ga0207680_100078912 430
44 3300025907 Ga0207645_10005589 Ga0207645_100055894 430
45 3300025909 Ga0207705_10003352 Ga0207705_100033522 430
46 3300025933 Ga0207706_10009997 Ga0207706_100099974 430
47 3300025940 Ga0207691_10003993 Ga0207691_100039937 430
48 3300025942 Ga0207689_10094316 Ga0207689_100943162 430
49 3300025960 Ga0207651_10000857 Ga0207651_100008579 430
50 3300025972 Ga0207668_10001121 Ga0207668_100011218 430
51 3300025986 Ga0207658_10001753 Ga0207658_100017535 430
52 3300026023 Ga0207677_10001454 Ga0207677_100014549 430
53 3300026035 Ga0207703_10035086 Ga0207703_100350862 430
54 3300026041 Ga0207639_10015321 Ga0207639_100153212 430
55 3300026088 Ga0207641_10014517 Ga0207641_100145174 430
56 3300026095 Ga0207676_10005271 Ga0207676_100052714 430
57 3300046459 Ga0495629_0153352 Ga0495629_0153352_49_1494 430
58 3300046663 Ga0495635_0154662 Ga0495635_0154662_13_1458 430
59 3300047320 Ga0495672_0015522 Ga0495672_0015522_2795_4213 430
60 3300044712 Ga0453684_0005834 Ga0453684_0005834_7996_9462 431
61 3300013306 Ga0163162_10099258 Ga0163162_100992582 433
62 3300013308 Ga0157375_10007963 Ga0157375_100079635 433
63 3300014969 Ga0157376_10119695 Ga0157376_101196952 433
64 3300046810 Ga0495660_0064103 Ga0495660_0064103_52_1434 433
65 3300026088 Ga0207641_10113736 Ga0207641_101137362 437
66 3300044712 Ga0453684_0046040 Ga0453684_0046040_3194_4660 439
67 iso_pu_bacteria 2816332295 2817480942 441
68 iso_pu_bacteria 3006858327 3006861342 441
69 3300031548 Ga0307408_100000010 Ga0307408_100000010219 443
70 3300032004 Ga0307414_10003184 Ga0307414_100031846 443
71 3300035114 Ga0373939_0000795 Ga0373939_0000795_5491_6837 443
72 3300035691 Ga0373931_0000202 Ga0373931_0000202_3241_4587 443
73 3300048929 Ga0496126_0000108 Ga0496126_0000108_52268_53659 443
74 3300050496 nmdc:mga07m45_2340_c1 nmdc:mga07m45_2340_c1_2140_3486 443
75 3300003322 rootL2_10033201 rootL2_1003320111 444
76 3300006353 Ga0075370_10052584 Ga0075370_100525842 444
77 3300028794 Ga0307515_10032064 Ga0307515_100320644 444
78 3300049764 Ga0501267_001703 Ga0501267_001703_272_1627 444
79 3300050493 nmdc:mga0k408_59855_c1 nmdc:mga0k408_59855_c1_164_1519 444
80 iso_pu_bacteria 2511231119 2511699648 444
81 iso_pu_bacteria 2540341094 2540606885 444
82 iso_pu_bacteria 2545555800 2545555916 444
83 iso_pu_bacteria 2554235283 2555467261 444
84 iso_pu_bacteria 2576861599 2578929338 444
85 iso_pu_bacteria 2630968484 2631983123 444
86 iso_pu_bacteria 2643221639 2644222129 444
87 iso_pu_bacteria 2643221646 2644257090 444
88 iso_pu_bacteria 2643221656 2644318620 444
89 iso_pu_bacteria 2643221735 2644740443 444
90 iso_pu_bacteria 2648501850 2651533062 444
91 iso_pu_bacteria 2671180844 2674419510 444
92 iso_pu_bacteria 2684623153 2686997095 444
93 iso_pu_bacteria 2687453109 2687498400 444
94 iso_pu_bacteria 2695420354 2695627600 444
95 iso_pu_bacteria 2716884898 2717916600 444
96 iso_pu_bacteria 2738543010 2739234356 444
97 iso_pu_bacteria 2808606399 2809056980 444
98 iso_pu_bacteria 2811994870 2812316284 444
99 iso_pu_bacteria 2818991468 2819723356 444
100 iso_pu_bacteria 2823526263 2823528258 444
101 iso_pu_bacteria 2860837431 2860839332 444
102 iso_pu_bacteria 2877768649 2877770435 444
103 iso_pu_bacteria 2880169592 2880171429 444
104 iso_pu_bacteria 2897109615 2897111449 444
105 iso_pu_bacteria 2904560550 2904561153 444
106 iso_pu_bacteria 2908665501 2908668530 444
107 iso_pu_bacteria 2919093281 2919096299 444
108 iso_pu_bacteria 2919726948 2919727974 444
109 iso_pu_bacteria 2954773129 2954774222 444
110 iso_pu_bacteria 2962290636 2962292775 444
111 iso_pu_bacteria 2969136845 2969138723 444
112 iso_pu_bacteria 2969141011 2969142889 444
113 iso_pu_bacteria 2969765954 2969766771 444
114 iso_pu_bacteria 2969770375 2969772517 444
115 iso_pu_bacteria 2971893375 2971895201 444
116 iso_pu_bacteria 2980492589 2980494522 444
117 iso_pu_bacteria 8022630665 8022631050 444
118 iso_pu_bacteria 8022653035 8022656481 444
119 iso_pu_bacteria 8051952484 8051952613 444
120 iso_pu_bacteria 8052174270 8052174831 444
121 3300005333 Ga0070677_10037498 Ga0070677_100374982 445
122 3300005456 Ga0070678_100028079 Ga0070678_1000280792 445
123 3300013308 Ga0157375_10058818 Ga0157375_100588183 445
124 3300013308 Ga0157375_10309928 Ga0157375_103099282 445
125 3300031727 Ga0316576_10103686 Ga0316576_101036862 445
126 3300032004 Ga0307414_10000278 Ga0307414_1000027815 445
127 3300036712 Ga0316584_0047893 Ga0316584_0047893_576_2030 445
128 iso_pu_bacteria 2818991457 2819661857 445
129 iso_pu_bacteria 2852684882 2852688521 445
130 iso_pu_bacteria 2919130084 2919133848 445
131 iso_pu_bacteria 2929195423 2929199863 445
132 iso_pu_bacteria 8022948649 8022951001 445
133 3300003187 JGI25151J46595_10000029 JGI25151J46595_1000002924 446
134 3300003578 Ga0006562J51391_1010153 Ga0006562J51391_10101533 446
135 3300005841 Ga0068863_100010579 Ga0068863_1000105792 446
136 3300009553 Ga0105249_10006322 Ga0105249_100063225 446
137 3300025229 Ga0209147_104778 Ga0209147_1047781 446
138 3300025294 Ga0209025_1000001 Ga0209025_10000011007 446
139 3300025961 Ga0207712_10005646 Ga0207712_100056465 446
140 3300026088 Ga0207641_10000854 Ga0207641_100008549 446
141 3300026088 Ga0207641_10013746 Ga0207641_100137464 446
142 3300026116 Ga0207674_10028772 Ga0207674_100287723 446
143 3300048919 Ga0496116_0063900 Ga0496116_0063900_822_2180 446
144 iso_pu_bacteria 2956897341 2956900702 446
145 3300006946 Ga0079104_1002118 Ga0079104_10021185 447
146 3300014326 Ga0157380_10048083 Ga0157380_100480832 447
147 3300014326 Ga0157380_10201864 Ga0157380_102018642 447
148 3300027111 Ga0209281_1004904 Ga0209281_10049042 447
149 3300005288 Ga0065714_10077060 Ga0065714_100770601 448
150 3300042876 Ga0451577_0035231 Ga0451577_0035231_795_2258 448
151 3300044673 Ga0453683_0034143 Ga0453683_0034143_546_2009 448
152 3300045051 Ga0451576_0013189 Ga0451576_0013189_2620_4083 448
153 3300049571 Ga0501034_0166005 Ga0501034_0166005_334_1701 448
154 3300049580 Ga0501046_0008126 Ga0501046_0008126_5342_6709 448
155 iso_pu_bacteria 2919688452 2919690119 448
156 3300005331 Ga0070670_100001779 Ga0070670_1000017797 449
157 3300005353 Ga0070669_100102565 Ga0070669_1001025652 449
158 3300009011 Ga0105251_10000008 Ga0105251_1000000862 449
159 3300015265 Ga0182005_1009028 Ga0182005_10090282 449
160 3300025735 Ga0207713_1000170 Ga0207713_100017069 449
161 3300025925 Ga0207650_10032686 Ga0207650_100326862 449
162 3300025935 Ga0207709_10006402 Ga0207709_100064025 449
163 3300027312 Ga0209371_1000156 Ga0209371_100015664 449
164 3300030500 Ga0268256_1000130 Ga0268256_100013012 449
165 3300031456 Ga0307513_10009665 Ga0307513_100096655 449
166 3300046453 Ga0495627_010540 Ga0495627_010540_530_1915 449
167 3300046519 Ga0495632_0040672 Ga0495632_0040672_700_2085 449
168 3300048920 Ga0496117_0002650 Ga0496117_0002650_9042_10421 449
169 3300048922 Ga0496119_0003154 Ga0496119_0003154_13481_14860 449
170 3300048923 Ga0496120_0001120 Ga0496120_0001120_13481_14860 449
171 3300048925 Ga0496122_0000361 Ga0496122_0000361_45800_47179 449
172 3300048926 Ga0496123_0000366 Ga0496123_0000366_63421_64800 449
173 3300048929 Ga0496126_0022037 Ga0496126_0022037_3785_5164 449
174 3300053161 Ga0500634_0007932 Ga0500634_0007932_3195_4580 449
175 iso_pu_bacteria 2690315857 2691330066 449
176 iso_pu_bacteria 2919513703 2919514075 449
177 iso_pu_bacteria 2919534386 2919537703 449
178 iso_pu_bacteria 2919675420 2919676156 449
179 iso_pu_bacteria 2747842501 2748017771 450
180 3300005331 Ga0070670_100095054 Ga0070670_1000950542 453
181 3300009545 Ga0105237_10028640 Ga0105237_100286403 453
182 3300025914 Ga0207671_10101703 Ga0207671_101017032 453
183 3300025925 Ga0207650_10106928 Ga0207650_101069282 453
184 3300032004 Ga0307414_10011888 Ga0307414_100118882 453
185 iso_pu_bacteria 2895498888 2895502017 453
186 iso_pu_bacteria 2895511927 2895517030 453
187 iso_pu_bacteria 2895522137 2895524560 453
188 iso_pu_bacteria 2895525241 2895525883 453
189 3300038705 Ga0237819_00123 Ga0237819_00123_7946_9325 454
190 3300013104 Ga0157370_10181005 Ga0157370_101810052 459
191 3300013102 Ga0157371_10033502 Ga0157371_100335022 461
192 3300013307 Ga0157372_10344807 Ga0157372_103448072 461
193 3300031824 Ga0307413_10028359 Ga0307413_100283591 461
194 3300037471 Ga0395905_0116686 Ga0395905_0116686_930_2420 462
195 3300042007 Ga0439449_0027132 Ga0439449_0027132_186_1646 462
196 3300044712 Ga0453684_0097854 Ga0453684_0097854_1481_2968 462
197 iso_pu_bacteria 2643221581 2643913539 462
198 iso_pu_bacteria 2923516293 2923519468 462
199 3300005616 Ga0068852_100036451 Ga0068852_1000364513 463
200 3300031456 Ga0307513_10003869 Ga0307513_1000386910 463
201 3300041512 Ga0451853_1099871 Ga0451853_1099871_23_1420 463
202 3300042435 Ga0439434_0018160 Ga0439434_0018160_211_1635 463
203 3300046525 Ga0495663_0000504 Ga0495663_0000504_6589_8013 463
204 3300046530 Ga0495654_0033078 Ga0495654_0033078_689_2086 463
205 3300046692 Ga0495671_0053661 Ga0495671_0053661_305_1729 463
206 3300048926 Ga0496123_0053297 Ga0496123_0053297_635_2032 463
207 iso_pu_bacteria 2643221685 2644478447 463
208 3300050491 nmdc:mga00v17_10011_c1 nmdc:mga00v17_10011_c1_2524_3936 465
209 2162886007 SwRhRL2b_contig_1841006 SwRhRL2b_0838.00000010 466
210 3300005289 Ga0065704_10070456 Ga0065704_1007045621 466
211 3300005289 Ga0065704_10103591 Ga0065704_101035912 466
212 3300049705 Ga0501225_0003788 Ga0501225_0003788_2733_4244 466

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13347

MFS_2

MFS/sugar transport protein

67

485

0.99

PF07690

MFS_1

Major Facilitator Superfamily

66

433

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d2w-assembly1.cif.gz_A zebrafish mfsd2a isoform b in inward open ligand 2b conformation 0.9024 25 460
7mjs-assembly1.cif.gz_X single-particle cryo-em structure of major facilitator superfamily domain containing 2a in complex with lpc-18:3 0.9001 24 457
8d2s-assembly1.cif.gz_A zebrafish mfsd2a isoform b in inward open ligand bound conformation 0.8982 21 460
8d2w-assembly1.cif.gz_A zebrafish mfsd2a isoform b in inward open ligand 2b conformation 0.8562 25 460
7mjs-assembly1.cif.gz_X single-particle cryo-em structure of major facilitator superfamily domain containing 2a in complex with lpc-18:3 0.8533 24 457
ID Description Score Start End Superfamily
af_P75683_10_207_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9746 30 226 1.20.1250.20
af_P75683_10_207_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.965 30 226 1.20.1250.20
af_P75683_225_430_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.965 248 447 1.20.1250.20
af_P0CE44_5_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9546 25 225 1.20.1250.20
af_Q5U3U7_43_508_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9385 25 455 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7C6AF71-F1-model_v4 MFS transporter 0.9857 25 216 GO:0005886
GO:0008643
GO:0015293
AF-A0A6I4KSS4-F1-model_v4 deleted 0.9592 21 206
AF-A0A2N1TNH5-F1-model_v4 MFS transporter 0.945 25 465 GO:0005886
GO:0006814
GO:0008643
GO:0015293
AF-A0A6I4KSS4-F1-model_v4 deleted 0.9445 21 206
AF-A0A024Q8X5-F1-model_v4 Putative symporter YjmB 0.9444 10 465 GO:0005886
GO:0006814
GO:0008643
GO:0015293

Feature Viewer

pLDDT pTM Quality
85.11 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map