F323086

General Info

Members Datasets Scaffolds Average Seq Length
212 157 210 682

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0000051|Ga0395898_0000051_29652_31877
Length 741
Sequence MHSDIQDRITKLREQIEHHNRLYYERAEPEISDREYDALYRELADLEAAHPEFASTDSPTQRVGSRVLEQFTQAQHLVRMQSLDNTYSEQEVVDFVERMQRLLPGATIPLTIEPKVDGVAISLLYEGGRLVRAVTRGDGTTGDDVTENVRTIRAIPHSLQGHAPERVEIRGEIYLPKKEFARINTERDEEGLPAFANPRNAAAGSLKQLDSRIVARRGLGGVFYGFGAFEGEEPPVTQSAFMRQLETWGMPVTGWLRRAESTEETLAAIRELGDVRHDFAFETDGAVIKADQIAQQRELGSTSKAPRWAMAYKYEPEQAETKLREITVQVGRTGVLTPVAELDPVFVSGSTVSRATLHNEDEVRRKDIRIGDTVVIEKAGEVIPAVVRVRTDLRNGTEKEFQMPDVCPACGEPVVREAGFVAVRCVNLHCPAQLTRLIEHFAMRGALDIEGLGDKVALTLIERGLVRSPLDLFELQLSDLATLNLGTDDEPHTFGEKNARKLLDALARAKTLPLWRWLHALAIPEVGAVTARDIVALHADLDAVATSEILRDIVRLSEITGSNPARKELSKEDREALNHEADALGEKLLAAGAAKKSKGAKHPRDVNTAVGPVAANAVIAWFAKGEGQETLRRIEKYGIQPAPEPRASAGASTLDSLISGKTFVITGTLSAPREEIAEQIRALGGKVSSSVSRATDYLLAGEEAGSKLSKAMELGVPVLDEAAFRALLDSAGGGSAQLDLL

Samples

Sample ID Description Type Environment
1 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
2 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
94 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
95 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
96 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
97 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
145 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0
Isolates 0.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.42
Nodule 0
Rhizoplane 3.77
Rhizosphere 90.09
Stem 0
Stem Tuber 0
Unclassified 4.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000022 3300002155 Bacteria 24100
2 rootH2_10004548 3300003320 Bacteria 37146
3 rootH2_10030318 3300003320 Bacteria 11542
4 rootH1_10043967 3300003323 Bacteria 21749
5 JGI25407J50210_10003088 3300003373 Bacteria 3970
6 Ga0065714_10067533 3300005288 Bacteria 5405
7 Ga0070666_10037923 3300005335 Bacteria 3206
8 Ga0070680_100009371 3300005336 Bacteria 7522
9 Ga0070692_10000111 3300005345 Bacteria 18811
10 Ga0070675_100007330 3300005354 Bacteria 8513
11 Ga0070671_100018155 3300005355 Bacteria 5711
12 Ga0070671_100085269 3300005355 Bacteria 2642
13 Ga0070674_100011679 3300005356 Bacteria 5353
14 Ga0070673_100010916 3300005364 Bacteria 6177
15 Ga0070673_100080785 3300005364 Bacteria 2635
16 Ga0070659_100007244 3300005366 Bacteria 8051
17 Ga0070667_100124494 3300005367 Bacteria 2245
18 Ga0070694_100071704 3300005444 Bacteria 2388
19 Ga0070708_100005294 3300005445 Bacteria 10220
20 Ga0070708_100079694 3300005445 Bacteria 2962
21 Ga0070663_100057888 3300005455 Bacteria 2782
22 Ga0070678_100010767 3300005456 Bacteria 5604
23 Ga0068867_100000100 3300005459 Bacteria 55007
24 Ga0070679_100151258 3300005530 Bacteria 2297
25 Ga0070684_100001902 3300005535 Bacteria 15294
26 Ga0070672_100063667 3300005543 Bacteria 2912
27 Ga0070672_100108221 3300005543 Bacteria 2263
28 Ga0070665_100005220 3300005548 Bacteria 13439
29 Ga0070665_100018401 3300005548 Bacteria 7001
30 Ga0068856_100000097 3300005614 Bacteria 83403
31 Ga0068859_100000005 3300005617 Bacteria 430800
32 Ga0068858_100010854 3300005842 Bacteria 8611
33 Ga0068862_100040468 3300005844 Bacteria 3961
34 Ga0081455_10000903 3300005937 Bacteria 38277
35 Ga0081455_10052817 3300005937 Bacteria 3476
36 Ga0081539_10006747 3300005985 Bacteria 10783
37 Ga0070716_100017524 3300006173 Bacteria 3715
38 Ga0068871_100030771 3300006358 Bacteria 4230
39 Ga0075428_100000090 3300006844 Bacteria 74510
40 Ga0075431_100149487 3300006847 Bacteria 2406
41 Ga0075434_100010663 3300006871 Bacteria 8628
42 Ga0075434_100056080 3300006871 Bacteria 3915
43 Ga0097620_100000005 3300006931 Bacteria 430800
44 Ga0111539_10008573 3300009094 Bacteria 12979
45 Ga0114129_10041973 3300009147 Bacteria 6441
46 Ga0114129_10167780 3300009147 Bacteria 2994
47 Ga0105243_10000166 3300009148 Bacteria 75434
48 Ga0105243_10001804 3300009148 Bacteria 18393
49 Ga0105242_10026479 3300009176 Bacteria 4597
50 Ga0157374_10083472 3300013296 Bacteria 3035
51 Ga0157374_10103279 3300013296 Unclassified 2735
52 Ga0157378_10009612 3300013297 Bacteria 8419
53 Ga0157378_10026184 3300013297 Bacteria 5141
54 Ga0163162_10122042 3300013306 Bacteria 2710
55 Ga0157375_10003024 3300013308 Bacteria 14591
56 Ga0157376_10013376 3300014969 Bacteria 6121
57 Ga0213872_10023315 3300021361 Bacteria 2847
58 Ga0213876_10001325 3300021384 Bacteria 15548
59 Ga0207697_10002389 3300025315 Bacteria 9777
60 Ga0207688_10008116 3300025901 Bacteria 5706
61 Ga0207645_10004030 3300025907 Bacteria 10950
62 Ga0207663_10001795 3300025916 Bacteria 10120
63 Ga0207649_10000838 3300025920 Bacteria 19781
64 Ga0207649_10006408 3300025920 Bacteria 6395
65 Ga0207644_10041260 3300025931 Bacteria 3264
66 Ga0207644_10051281 3300025931 Bacteria 2961
67 Ga0207690_10020481 3300025932 Bacteria 4088
68 Ga0207686_10057919 3300025934 Bacteria 2441
69 Ga0207709_10000095 3300025935 Bacteria 137828
70 Ga0207709_10001226 3300025935 Bacteria 18425
71 Ga0207691_10002960 3300025940 Bacteria 16587
72 Ga0207679_10003399 3300025945 Bacteria 9816
73 Ga0207679_10046841 3300025945 Bacteria 3137
74 Ga0207651_10012351 3300025960 Bacteria 4829
75 Ga0207703_10007496 3300026035 Bacteria 8662
76 Ga0207702_10000426 3300026078 Bacteria 48317
77 Ga0207648_10000285 3300026089 Bacteria 55006
78 Ga0207683_10019097 3300026121 Bacteria 5851
79 Ga0209970_1001231 3300027614 Bacteria 4517
80 Ga0209983_1001108 3300027665 Bacteria 5950
81 Ga0209971_1004053 3300027682 Bacteria 3469
82 Ga0209966_1002214 3300027695 Bacteria 3248
83 Ga0268266_10008440 3300028379 Bacteria 9158
84 Ga0268266_10008550 3300028379 Bacteria 9097
85 Ga0265337_1001043 3300028556 Bacteria 14364
86 Ga0265319_1001366 3300028563 Bacteria 14677
87 Ga0265319_1003654 3300028563 Bacteria 7939
88 Ga0265319_1011753 3300028563 Bacteria 3566
89 Ga0265318_10001534 3300028577 Bacteria 13447
90 Ga0265318_10003268 3300028577 Bacteria 8251
91 Ga0265318_10006669 3300028577 Bacteria 5295
92 Ga0265318_10015218 3300028577 Bacteria 3206
93 Ga0265336_10002371 3300028666 Bacteria 7815
94 Ga0265338_10000809 3300028800 Bacteria 52723
95 Ga0265338_10003652 3300028800 Bacteria 21435
96 Ga0265338_10034540 3300028800 Bacteria 4884
97 Ga0265324_10000779 3300029957 Bacteria 20958
98 Ga0265324_10004654 3300029957 Bacteria 6113
99 Ga0265324_10018734 3300029957 Bacteria 2500
100 Ga0265320_10000023 3300031240 Bacteria 171409
101 Ga0265320_10000633 3300031240 Bacteria 26863
102 Ga0265320_10001734 3300031240 Bacteria 15466
103 Ga0265320_10001979 3300031240 Bacteria 14469
104 Ga0265320_10002566 3300031240 Bacteria 12620
105 Ga0265320_10018319 3300031240 Bacteria 3859
106 Ga0265320_10023826 3300031240 Bacteria 3249
107 Ga0265340_10010146 3300031247 Bacteria 5046
108 Ga0265339_10011507 3300031249 Bacteria 5444
109 Ga0265316_10001767 3300031344 Bacteria 22828
110 Ga0265316_10017039 3300031344 Bacteria 6289
111 Ga0265316_10031616 3300031344 Bacteria 4326
112 Ga0265313_10000398 3300031595 Bacteria 46723
113 Ga0265313_10000683 3300031595 Bacteria 34980
114 Ga0265314_10000926 3300031711 Bacteria 34583
115 Ga0265314_10026599 3300031711 Bacteria 4344
116 Ga0265342_10020304 3300031712 Bacteria 4265
117 Ga0265342_10021537 3300031712 Bacteria 4114
118 Ga0307412_10000655 3300031911 Bacteria 20130
119 Ga0373955_0044886 3300035172 Bacteria 2383
120 Ga0373935_0007070 3300035692 Bacteria 6701
121 Ga0395899_0000015 3300037312 Bacteria 470061
122 Ga0395900_0012798 3300037418 Bacteria 8576
123 Ga0395898_0000051 3300037466 Bacteria 281872
124 Ga0395901_0046621 3300038443 Bacteria 4503
125 Ga0436365_1017253 3300039437 Bacteria 22039
126 Ga0436360_0128867 3300039438 Bacteria 4472
127 Ga0436361_0473098 3300039447 Bacteria 21318
128 Ga0436363_0658803 3300039450 Bacteria 6004
129 Ga0439465_0000109 3300041413 Bacteria 19094
130 Ga0439460_0005330 3300042461 Bacteria 3151
131 Ga0439440_0001701 3300042993 Bacteria 4046
132 Ga0453683_0000719 3300044673 Bacteria 34033
133 Ga0453684_0000036 3300044712 Bacteria 711481
134 Ga0453684_0084589 3300044712 Bacteria 3944
135 Ga0453684_0152882 3300044712 Bacteria 2740
136 Ga0466971_0000107 3300044719 Bacteria 30123
137 Ga0466957_0004042 3300044842 Bacteria 8120
138 Ga0451576_0000146 3300045051 Bacteria 179707
139 Ga0451576_0021502 3300045051 Bacteria 7012
140 Ga0451576_0106467 3300045051 Viruses 2918
141 Ga0451576_0157527 3300045051 Bacteria 2369
142 Ga0466958_0026858 3300045836 Bacteria 3403
143 Ga0466967_0167103 3300045976 Bacteria 2068
144 Ga0495627_000025 3300046453 Bacteria 248825
145 Ga0495638_0061072 3300046460 Bacteria 2330
146 Ga0495651_0008405 3300046462 Bacteria 7909
147 Ga0495653_0114506 3300046463 Bacteria 1932
148 Ga0495610_0000001 3300046512 Bacteria 1620061
149 Ga0495632_0001495 3300046519 Bacteria 19347
150 Ga0495643_0016717 3300046522 Bacteria 4307
151 Ga0495663_0003247 3300046525 Bacteria 4726
152 Ga0495654_0000008 3300046530 Bacteria 398340
153 Ga0495633_0000585 3300046558 Bacteria 35319
154 Ga0495625_0004236 3300046660 Bacteria 13663
155 Ga0495675_0012748 3300047444 Bacteria 5295
156 Ga0495686_0000339 3300047472 Bacteria 77113
157 Ga0495686_0001400 3300047472 Bacteria 26646
158 Ga0496102_0013410 3300048905 Bacteria 7099
159 Ga0496107_0015655 3300048910 Bacteria 5317
160 Ga0496109_0022429 3300048912 Bacteria 5591
161 Ga0496112_0004579 3300048915 Bacteria 11754
162 Ga0496114_0046496 3300048917 Bacteria 3607
163 Ga0496114_0049680 3300048917 Bacteria 3490
164 Ga0496115_0002126 3300048918 Bacteria 14158
165 Ga0496115_0033448 3300048918 Bacteria 4059
166 Ga0496117_0000315 3300048920 Bacteria 84595
167 Ga0496125_0000110 3300048928 Bacteria 192693
168 Ga0501031_0000673 3300049568 Bacteria 20359
169 Ga0501031_0012120 3300049568 Bacteria 5621
170 Ga0501032_0009713 3300049569 Bacteria 6966
171 Ga0501033_0000002 3300049570 Bacteria 668574
172 Ga0501033_0000015 3300049570 Bacteria 218502
173 Ga0501037_0000009 3300049573 Bacteria 203061
174 Ga0501038_0000379 3300049574 Bacteria 38322
175 Ga0501038_0020460 3300049574 Bacteria 5948
176 Ga0501038_0029363 3300049574 Bacteria 4874
177 Ga0501039_0007638 3300049575 Bacteria 8252
178 Ga0501039_0014312 3300049575 Bacteria 6074
179 Ga0501040_0017082 3300049576 Bacteria 4814
180 Ga0501041_0003204 3300049577 Bacteria 9404
181 Ga0501043_0000089 3300049579 Bacteria 81412
182 Ga0501043_0000172 3300049579 Bacteria 57975
183 Ga0501046_0021267 3300049580 Bacteria 5356
184 Ga0501047_0002396 3300049581 Bacteria 17928
185 Ga0501048_0016995 3300049582 Bacteria 5362
186 Ga0501067_0014991 3300049583 Bacteria 4288
187 Ga0501070_0010500 3300049586 Bacteria 7831
188 Ga0501073_0030971 3300049589 Bacteria 3819
189 Ga0501076_0002862 3300049592 Bacteria 11941
190 Ga0501076_0082060 3300049592 Bacteria 2588
191 Ga0501077_0029829 3300049593 Bacteria 3468
192 Ga0501080_0008321 3300049742 Bacteria 9396
193 Ga0501080_0015792 3300049742 Bacteria 6965
194 Ga0501081_0003422 3300049743 Bacteria 10121
195 Ga0501241_000014 3300049758 Bacteria 100728
196 Ga0501269_000330 3300049766 Bacteria 12296
197 Ga0501035_0000003 3300049822 Bacteria 557461
198 Ga0501044_0000271 3300049823 Bacteria 65754
199 Ga0501045_0003357 3300049824 Bacteria 10965
200 nmdc:mga07m45_13524_c1 3300050496 Bacteria 4333
201 nmdc:mga05p37_23983_c1 3300050507 Bacteria 7409
202 nmdc:mga05p37_98584_c1 3300050507 Bacteria 3599
203 nmdc:mga06r32_1181_c1 3300050510 Bacteria 23551
204 nmdc:mga0n895_78041_c1 3300050512 Bacteria 3295
205 Ga0500555_000004 3300053103 Bacteria 343705
206 Ga0500556_0002245 3300053104 Bacteria 6409
207 Ga0501084_0015101 3300054114 Bacteria 6405
208 Ga0501084_0138422 3300054114 Bacteria 2049
209 Ga0466962_0000007 3300061719 Bacteria 157857
210 Ga0530510_0023141 3300061734 Bacteria 4425

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013297 Ga0157378_10026184 Ga0157378_100261844 541
2 3300045051 Ga0451576_0157527 Ga0451576_0157527_540_2300 574
3 3300048915 Ga0496112_0004579 Ga0496112_0004579_9909_11672 580
4 3300046463 Ga0495653_0114506 Ga0495653_0114506_75_1844 582
5 3300049592 Ga0501076_0082060 Ga0501076_0082060_721_2559 582
6 3300054114 Ga0501084_0138422 Ga0501084_0138422_198_2036 582
7 3300027682 Ga0209971_1004053 Ga0209971_10040532 596
8 3300050507 nmdc:mga05p37_98584_c1 nmdc:mga05p37_98584_c1_18_1889 601
9 3300049583 Ga0501067_0014991 Ga0501067_0014991_648_2660 612
10 3300061734 Ga0530510_0023141 Ga0530510_0023141_192_2204 612
11 3300005530 Ga0070679_100151258 Ga0070679_1001512581 613
12 3300006871 Ga0075434_100010663 Ga0075434_1000106637 613
13 3300048910 Ga0496107_0015655 Ga0496107_0015655_470_2545 618
14 3300048917 Ga0496114_0049680 Ga0496114_0049680_1369_3444 618
15 3300048918 Ga0496115_0033448 Ga0496115_0033448_656_2731 618
16 3300005535 Ga0070684_100001902 Ga0070684_1000019023 626
17 3300045976 Ga0466967_0167103 Ga0466967_0167103_14_1939 632
18 3300050496 nmdc:mga07m45_13524_c1 nmdc:mga07m45_13524_c1_774_2771 633
19 3300027614 Ga0209970_1001231 Ga0209970_10012312 635
20 3300027665 Ga0209983_1001108 Ga0209983_10011084 635
21 3300027695 Ga0209966_1002214 Ga0209966_10022142 635
22 3300046453 Ga0495627_000025 Ga0495627_000025_129652_131655 641
23 3300046530 Ga0495654_0000008 Ga0495654_0000008_18815_20818 641
24 3300046558 Ga0495633_0000585 Ga0495633_0000585_19036_21039 641
25 3300047472 Ga0495686_0001400 Ga0495686_0001400_6858_8861 641
26 3300005288 Ga0065714_10067533 Ga0065714_100675332 642
27 3300031911 Ga0307412_10000655 Ga0307412_100006558 642
28 3300041413 Ga0439465_0000109 Ga0439465_0000109_13236_15242 642
29 3300046460 Ga0495638_0061072 Ga0495638_0061072_79_2085 642
30 3300046512 Ga0495610_0000001 Ga0495610_0000001_383438_385444 642
31 3300046519 Ga0495632_0001495 Ga0495632_0001495_5605_7611 642
32 3300046522 Ga0495643_0016717 Ga0495643_0016717_737_2743 642
33 3300046525 Ga0495663_0003247 Ga0495663_0003247_322_2328 642
34 3300046660 Ga0495625_0004236 Ga0495625_0004236_946_2952 642
35 3300047472 Ga0495686_0000339 Ga0495686_0000339_20510_22516 642
36 3300049758 Ga0501241_000014 Ga0501241_000014_9317_11323 642
37 3300049766 Ga0501269_000330 Ga0501269_000330_3538_5544 642
38 3300044712 Ga0453684_0000036 Ga0453684_0000036_416740_418743 644
39 3300035692 Ga0373935_0007070 Ga0373935_0007070_517_2574 645
40 3300005335 Ga0070666_10037923 Ga0070666_100379232 649
41 3300005355 Ga0070671_100018155 Ga0070671_1000181552 649
42 3300005364 Ga0070673_100080785 Ga0070673_1000807852 649
43 3300013308 Ga0157375_10003024 Ga0157375_1000302410 649
44 3300025931 Ga0207644_10051281 Ga0207644_100512812 649
45 3300028563 Ga0265319_1001366 Ga0265319_10013665 650
46 3300028577 Ga0265318_10015218 Ga0265318_100152182 650
47 3300031240 Ga0265320_10001979 Ga0265320_100019794 650
48 3300045051 Ga0451576_0106467 Ga0451576_0106467_840_2858 650
49 3300053103 Ga0500555_000004 Ga0500555_000004_230929_232935 651
50 iso_pu_bacteria 2718217752 2718715985 652
51 3300005345 Ga0070692_10000111 Ga0070692_100001113 653
52 3300005455 Ga0070663_100057888 Ga0070663_1000578882 653
53 3300005543 Ga0070672_100108221 Ga0070672_1001082212 653
54 3300005844 Ga0068862_100040468 Ga0068862_1000404682 653
55 3300006844 Ga0075428_100000090 Ga0075428_10000009014 653
56 3300006871 Ga0075434_100056080 Ga0075434_1000560803 653
57 3300048905 Ga0496102_0013410 Ga0496102_0013410_4624_6651 653
58 3300048928 Ga0496125_0000110 Ga0496125_0000110_100832_102823 653
59 3300050512 nmdc:mga0n895_78041_c1 nmdc:mga0n895_78041_c1_567_2609 653
60 3300005444 Ga0070694_100071704 Ga0070694_1000717042 654
61 3300005445 Ga0070708_100005294 Ga0070708_1000052942 654
62 3300006173 Ga0070716_100017524 Ga0070716_1000175242 654
63 3300009148 Ga0105243_10001804 Ga0105243_1000180411 654
64 3300014969 Ga0157376_10013376 Ga0157376_100133763 654
65 3300025916 Ga0207663_10001795 Ga0207663_100017952 654
66 3300025935 Ga0207709_10001226 Ga0207709_1000122612 654
67 3300038443 Ga0395901_0046621 Ga0395901_0046621_2208_4214 656
68 3300048920 Ga0496117_0000315 Ga0496117_0000315_3595_5616 656
69 3300005355 Ga0070671_100085269 Ga0070671_1000852691 657
70 3300005356 Ga0070674_100011679 Ga0070674_1000116795 657
71 3300005364 Ga0070673_100010916 Ga0070673_1000109162 657
72 3300005367 Ga0070667_100124494 Ga0070667_1001244941 657
73 3300005543 Ga0070672_100063667 Ga0070672_1000636672 657
74 3300005548 Ga0070665_100018401 Ga0070665_1000184014 657
75 3300006847 Ga0075431_100149487 Ga0075431_1001494871 657
76 3300009147 Ga0114129_10041973 Ga0114129_100419733 657
77 3300013296 Ga0157374_10083472 Ga0157374_100834724 657
78 3300013306 Ga0163162_10122042 Ga0163162_101220422 657
79 3300025315 Ga0207697_10002389 Ga0207697_100023895 657
80 3300025907 Ga0207645_10004030 Ga0207645_100040304 657
81 3300025931 Ga0207644_10041260 Ga0207644_100412601 657
82 3300025940 Ga0207691_10002960 Ga0207691_100029604 657
83 3300025945 Ga0207679_10046841 Ga0207679_100468411 657
84 3300025960 Ga0207651_10012351 Ga0207651_100123511 657
85 3300028379 Ga0268266_10008550 Ga0268266_100085502 657
86 3300039438 Ga0436360_0128867 Ga0436360_0128867_1728_3728 657
87 3300039450 Ga0436363_0658803 Ga0436363_0658803_1525_3528 657
88 3300049568 Ga0501031_0012120 Ga0501031_0012120_1925_4030 657
89 3300049574 Ga0501038_0029363 Ga0501038_0029363_933_3038 657
90 3300049575 Ga0501039_0007638 Ga0501039_0007638_4685_6790 657
91 3300049576 Ga0501040_0017082 Ga0501040_0017082_851_2956 657
92 3300049577 Ga0501041_0003204 Ga0501041_0003204_2023_4128 657
93 3300049580 Ga0501046_0021267 Ga0501046_0021267_84_2189 657
94 3300049582 Ga0501048_0016995 Ga0501048_0016995_337_2442 657
95 3300049589 Ga0501073_0030971 Ga0501073_0030971_1475_3580 657
96 3300049592 Ga0501076_0002862 Ga0501076_0002862_2848_4953 657
97 3300049593 Ga0501077_0029829 Ga0501077_0029829_688_2793 657
98 3300049742 Ga0501080_0015792 Ga0501080_0015792_4021_6126 657
99 3300049743 Ga0501081_0003422 Ga0501081_0003422_5880_7985 657
100 3300049824 Ga0501045_0003357 Ga0501045_0003357_2669_4774 657
101 3300050507 nmdc:mga05p37_23983_c1 nmdc:mga05p37_23983_c1_2418_4478 657
102 3300054114 Ga0501084_0015101 Ga0501084_0015101_2454_4559 657
103 3300005445 Ga0070708_100079694 Ga0070708_1000796942 658
104 3300005937 Ga0081455_10052817 Ga0081455_100528172 658
105 3300009094 Ga0111539_10008573 Ga0111539_100085739 658
106 3300039447 Ga0436361_0473098 Ga0436361_0473098_7823_9826 658
107 3300048912 Ga0496109_0022429 Ga0496109_0022429_1922_4072 658
108 3300053104 Ga0500556_0002245 Ga0500556_0002245_2226_4226 658
109 3300005617 Ga0068859_100000005 Ga0068859_100000005308 659
110 3300006358 Ga0068871_100030771 Ga0068871_1000307713 659
111 3300006931 Ga0097620_100000005 Ga0097620_100000005308 659
112 3300013297 Ga0157378_10009612 Ga0157378_100096122 659
113 3300044673 Ga0453683_0000719 Ga0453683_0000719_27740_29794 659
114 3300045836 Ga0466958_0026858 Ga0466958_0026858_1236_3245 659
115 3300048917 Ga0496114_0046496 Ga0496114_0046496_151_2160 659
116 3300048918 Ga0496115_0002126 Ga0496115_0002126_1312_3321 659
117 3300005336 Ga0070680_100009371 Ga0070680_1000093717 660
118 3300005985 Ga0081539_10006747 Ga0081539_100067472 660
119 3300031711 Ga0265314_10026599 Ga0265314_100265993 660
120 3300044712 Ga0453684_0084589 Ga0453684_0084589_1418_3475 660
121 3300044712 Ga0453684_0152882 Ga0453684_0152882_201_2225 660
122 3300045051 Ga0451576_0000146 Ga0451576_0000146_6596_8623 660
123 3300045051 Ga0451576_0021502 Ga0451576_0021502_4571_6598 660
124 iso_pu_bacteria 2786546548 2787506780 660
125 3300003373 JGI25407J50210_10003088 JGI25407J50210_100030882 661
126 3300005937 Ga0081455_10000903 Ga0081455_1000090310 661
127 3300021361 Ga0213872_10023315 Ga0213872_100233152 661
128 3300021384 Ga0213876_10001325 Ga0213876_100013258 661
129 3300035172 Ga0373955_0044886 Ga0373955_0044886_174_2189 661
130 3300039437 Ga0436365_1017253 Ga0436365_1017253_7843_9948 661
131 3300042461 Ga0439460_0005330 Ga0439460_0005330_344_2425 661
132 3300042993 Ga0439440_0001701 Ga0439440_0001701_1918_3999 661
133 3300046462 Ga0495651_0008405 Ga0495651_0008405_2736_4751 661
134 3300047444 Ga0495675_0012748 Ga0495675_0012748_342_2357 661
135 3300009147 Ga0114129_10167780 Ga0114129_101677802 662
136 3300028577 Ga0265318_10001534 Ga0265318_100015348 663
137 3300029957 Ga0265324_10018734 Ga0265324_100187341 663
138 3300031240 Ga0265320_10023826 Ga0265320_100238263 663
139 3300031344 Ga0265316_10031616 Ga0265316_100316164 663
140 3300031595 Ga0265313_10000683 Ga0265313_100006839 663
141 3300031712 Ga0265342_10021537 Ga0265342_100215372 663
142 3300050510 nmdc:mga06r32_1181_c1 nmdc:mga06r32_1181_c1_9104_11164 663
143 3300005548 Ga0070665_100005220 Ga0070665_1000052202 665
144 3300005842 Ga0068858_100010854 Ga0068858_1000108542 665
145 3300009176 Ga0105242_10026479 Ga0105242_100264793 665
146 3300025934 Ga0207686_10057919 Ga0207686_100579192 665
147 3300026035 Ga0207703_10007496 Ga0207703_100074966 665
148 3300028379 Ga0268266_10008440 Ga0268266_100084401 665
149 3300028556 Ga0265337_1001043 Ga0265337_10010435 665
150 3300028563 Ga0265319_1003654 Ga0265319_10036545 665
151 3300028577 Ga0265318_10003268 Ga0265318_100032685 665
152 3300028666 Ga0265336_10002371 Ga0265336_100023715 665
153 3300028800 Ga0265338_10000809 Ga0265338_1000080920 665
154 3300028800 Ga0265338_10003652 Ga0265338_1000365214 665
155 3300029957 Ga0265324_10000779 Ga0265324_100007795 665
156 3300029957 Ga0265324_10004654 Ga0265324_100046543 665
157 3300031240 Ga0265320_10000633 Ga0265320_100006335 665
158 3300031240 Ga0265320_10001734 Ga0265320_1000173411 665
159 3300031240 Ga0265320_10018319 Ga0265320_100183192 665
160 3300031247 Ga0265340_10010146 Ga0265340_100101465 665
161 3300031344 Ga0265316_10001767 Ga0265316_100017675 665
162 3300031595 Ga0265313_10000398 Ga0265313_1000039822 665
163 3300031711 Ga0265314_10000926 Ga0265314_1000092614 665
164 3300031712 Ga0265342_10020304 Ga0265342_100203043 665
165 3300031344 Ga0265316_10017039 Ga0265316_100170393 667
166 3300003320 rootH2_10030318 rootH2_100303183 668
167 3300005459 Ga0068867_100000100 Ga0068867_10000010048 684
168 3300009148 Ga0105243_10000166 Ga0105243_100001666 684
169 3300025920 Ga0207649_10006408 Ga0207649_100064086 684
170 3300025935 Ga0207709_10000095 Ga0207709_1000009555 684
171 3300025945 Ga0207679_10003399 Ga0207679_100033999 684
172 3300026089 Ga0207648_10000285 Ga0207648_100002856 684
173 3300028800 Ga0265338_10034540 Ga0265338_100345402 684
174 3300031249 Ga0265339_10011507 Ga0265339_100115073 684
175 3300049742 Ga0501080_0008321 Ga0501080_0008321_4398_6515 687
176 3300037418 Ga0395900_0012798 Ga0395900_0012798_3231_5387 691
177 3300028577 Ga0265318_10006669 Ga0265318_100066693 693
178 3300028563 Ga0265319_1011753 Ga0265319_10117533 697
179 3300031240 Ga0265320_10002566 Ga0265320_100025661 697
180 3300031240 Ga0265320_10000023 Ga0265320_1000002318 702
181 3300013296 Ga0157374_10103279 Ga0157374_101032792 704
182 3300005354 Ga0070675_100007330 Ga0070675_1000073302 706
183 3300003323 rootH1_10043967 rootH1_1004396717 723
184 3300049570 Ga0501033_0000015 Ga0501033_0000015_138788_141013 725
185 3300049574 Ga0501038_0020460 Ga0501038_0020460_1443_3668 725
186 3300049579 Ga0501043_0000172 Ga0501043_0000172_30434_32650 725
187 3300037312 Ga0395899_0000015 Ga0395899_0000015_262890_265103 727
188 3300049568 Ga0501031_0000673 Ga0501031_0000673_606_2816 727
189 3300049575 Ga0501039_0014312 Ga0501039_0014312_38_2245 727
190 3300049579 Ga0501043_0000089 Ga0501043_0000089_55287_57497 727
191 3300049581 Ga0501047_0002396 Ga0501047_0002396_11944_14154 727
192 3300049586 Ga0501070_0010500 Ga0501070_0010500_5455_7665 727
193 3300049822 Ga0501035_0000003 Ga0501035_0000003_259457_261667 727
194 3300005614 Ga0068856_100000097 Ga0068856_10000009738 728
195 3300026078 Ga0207702_10000426 Ga0207702_100004264 728
196 3300037466 Ga0395898_0000051 Ga0395898_0000051_29652_31877 728
197 3300044842 Ga0466957_0004042 Ga0466957_0004042_1624_3840 728
198 3300025901 Ga0207688_10008116 Ga0207688_100081162 729
199 3300044719 Ga0466971_0000107 Ga0466971_0000107_27682_29898 729
200 3300049573 Ga0501037_0000009 Ga0501037_0000009_36585_38807 729
201 3300049823 Ga0501044_0000271 Ga0501044_0000271_45910_48132 729
202 3300061719 Ga0466962_0000007 Ga0466962_0000007_61084_63300 729
203 3300003320 rootH2_10004548 rootH2_1000454817 731
204 3300049569 Ga0501032_0009713 Ga0501032_0009713_353_2569 731
205 3300049570 Ga0501033_0000002 Ga0501033_0000002_206210_208426 731
206 3300049574 Ga0501038_0000379 Ga0501038_0000379_35397_37613 731
207 3300002155 JGI24033J26618_1000022 JGI24033J26618_100002214 732
208 3300005366 Ga0070659_100007244 Ga0070659_1000072449 732
209 3300005456 Ga0070678_100010767 Ga0070678_1000107673 732
210 3300025920 Ga0207649_10000838 Ga0207649_100008388 732
211 3300025932 Ga0207690_10020481 Ga0207690_100204812 732
212 3300026121 Ga0207683_10019097 Ga0207683_100190972 732

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03119

DNA_ligase_ZBD

NAD-dependent DNA ligase C4 zinc finger domain

406

432

0.99

PF01653

DNA_ligase_aden

NAD-dependent DNA ligase adenylation domain

68

317

0.98

PF03120

DNA_ligase_OB

NAD-dependent DNA ligase OB-fold domain

320

398

0.97

PF22745

Nlig-Ia

DNA ligase-like, N-terminal NAD+-binding domain

4

62

0.93

PF00533

BRCT

BRCA1 C Terminus (BRCT) domain

653

728

0.92

PF12738

PTCB-BRCT

twin BRCT domain

662

720

0.91

Feature Viewer

pLDDT pTM Quality
84.24 0.47 Low
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Predicted Structure (AlphaFold2)

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