F321754

General Info

Members Datasets Scaffolds Average Seq Length
211 162 209 193

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10432191|Ga0265316_104321912
Length 200
Sequence MLSQIRPAIVSTILFTLLLGVGYPLVVTGIAKVAFPFQAEGSLIHDSTGKVIGSALIGQAFAKPEYLHPRPSAAGNGYDASNSSGSNYGPLNTDMAKRIKGDADAIRASGISEVTEDSVTTSGSGLDPHISPAYALLQADRVAKARGASPDEVRKLISEHVEGQWLGFIGQPRVNVLMTNRALDLALPKAQAKASQPKAS

Samples

Sample ID Description Type Environment
1 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
2 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
34 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
35 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
62 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
63 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
81 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
82 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
94 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
133 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
138 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
141 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
142 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
148 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
151 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
152 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
155 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
156 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
157 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
158 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
159 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
160 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.05
Metatranscriptomes 0
Isolates 0.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.91
Nodule 0
Rhizoplane 1.9
Rhizosphere 69.67
Stem 0
Stem Tuber 0
Unclassified 8.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100218952 3300005331 Bacteria 1656
2 Ga0070668_100810582 3300005347 Bacteria 832
3 Ga0070673_101254787 3300005364 Bacteria 695
4 Ga0070662_100788468 3300005457 Bacteria 807
5 Ga0070679_100849368 3300005530 Bacteria 856
6 Ga0070665_100000657 3300005548 Bacteria 46640
7 Ga0070665_100076664 3300005548 Bacteria 3350
8 Ga0070665_100172760 3300005548 Bacteria 2162
9 Ga0068856_100363117 3300005614 Bacteria 1467
10 Ga0068852_100245295 3300005616 Bacteria 1714
11 Ga0068864_100000182 3300005618 Bacteria 58155
12 Ga0068863_100000101 3300005841 Bacteria 92384
13 Ga0068863_101391508 3300005841 Bacteria 709
14 Ga0068858_100000260 3300005842 Bacteria 56470
15 Ga0068858_100136020 3300005842 Bacteria 2306
16 Ga0068860_100000023 3300005843 Bacteria 279076
17 Ga0068860_100870593 3300005843 Bacteria 916
18 Ga0068862_100010088 3300005844 Bacteria 7798
19 Ga0068862_100220493 3300005844 Bacteria 1717
20 Ga0075365_10038234 3300006038 Bacteria 3118
21 Ga0075365_10287125 3300006038 Bacteria 1158
22 Ga0075368_10015328 3300006042 Bacteria 2842
23 Ga0075363_100020323 3300006048 Bacteria 3329
24 Ga0075364_10000257 3300006051 Bacteria 25641
25 Ga0075364_10536182 3300006051 Bacteria 800
26 Ga0075367_10002033 3300006178 Bacteria 9046
27 Ga0105240_10005089 3300009093 Bacteria 19699
28 Ga0105240_10008146 3300009093 Bacteria 15030
29 Ga0105240_10156101 3300009093 Bacteria 2714
30 Ga0105247_10090220 3300009101 Bacteria 1944
31 Ga0105241_10305334 3300009174 Bacteria 1367
32 Ga0105248_10209149 3300009177 Bacteria 2198
33 Ga0105248_11125428 3300009177 Bacteria 887
34 Ga0105248_11743570 3300009177 Bacteria 706
35 Ga0105237_10706222 3300009545 Bacteria 1015
36 Ga0105237_11160927 3300009545 Bacteria 779
37 Ga0105238_10034100 3300009551 Bacteria 5180
38 Ga0105238_10469857 3300009551 Bacteria 1256
39 Ga0105249_10644887 3300009553 Bacteria 1116
40 Ga0105239_10383877 3300010375 Bacteria 1588
41 Ga0163162_10014012 3300013306 Bacteria 7837
42 Ga0157379_10120696 3300014968 Bacteria 2358
43 Ga0163161_10525720 3300017792 Bacteria 967
44 Ga0213875_10000928 3300021388 Bacteria 21144
45 Ga0209026_1000455 3300025250 Bacteria 32394
46 Ga0209130_1020289 3300025284 Bacteria 1523
47 Ga0207680_10091160 3300025903 Bacteria 1939
48 Ga0207695_10001222 3300025913 Bacteria 44042
49 Ga0207695_10006177 3300025913 Bacteria 15612
50 Ga0207695_10138403 3300025913 Bacteria 2386
51 Ga0207657_10008582 3300025919 Bacteria 10350
52 Ga0207657_10359775 3300025919 Bacteria 1147
53 Ga0207652_10904326 3300025921 Bacteria 779
54 Ga0207694_10022332 3300025924 Bacteria 4799
55 Ga0207644_10517806 3300025931 Bacteria 985
56 Ga0207704_10462681 3300025938 Bacteria 1015
57 Ga0207711_10028739 3300025941 Bacteria 4683
58 Ga0207711_10249947 3300025941 Bacteria 1628
59 Ga0207711_10980875 3300025941 Bacteria 784
60 Ga0207667_10695829 3300025949 Bacteria 1019
61 Ga0207703_10000113 3300026035 Bacteria 96214
62 Ga0207703_10107578 3300026035 Bacteria 2374
63 Ga0207641_10000109 3300026088 Bacteria 121126
64 Ga0207641_10783213 3300026088 Bacteria 943
65 Ga0207676_10000337 3300026095 Bacteria 40385
66 Ga0207676_10956004 3300026095 Bacteria 842
67 Ga0268266_10000003 3300028379 Bacteria 1701703
68 Ga0268266_10081209 3300028379 Bacteria 2826
69 Ga0268265_10166203 3300028380 Bacteria 1880
70 Ga0268264_10000008 3300028381 Bacteria 773387
71 Ga0265319_1054243 3300028563 Bacteria 1315
72 Ga0265318_10022226 3300028577 Bacteria 2539
73 Ga0307517_10129746 3300028786 Bacteria 1821
74 Ga0265338_10046177 3300028800 Bacteria 3994
75 Ga0265338_10064496 3300028800 Bacteria 3185
76 Ga0265338_10247319 3300028800 Bacteria 1317
77 Ga0265340_10073321 3300031247 Bacteria 1620
78 Ga0265331_10258677 3300031250 Bacteria 780
79 Ga0265327_10017720 3300031251 Bacteria 4451
80 Ga0265327_10037043 3300031251 Bacteria 2675
81 Ga0265316_10432191 3300031344 Bacteria 946
82 Ga0307513_10000471 3300031456 Bacteria 57936
83 Ga0307513_10005326 3300031456 Bacteria 17017
84 Ga0307513_10037972 3300031456 Bacteria 5353
85 Ga0307508_10248759 3300031616 Bacteria 1374
86 Ga0265314_10127280 3300031711 Bacteria 1593
87 Ga0307510_10031149 3300033180 Bacteria 6031
88 Ga0373944_0101828 3300035089 Bacteria 971
89 Ga0373939_0024074 3300035114 Bacteria 1693
90 Ga0373946_0047644 3300035171 Bacteria 1781
91 Ga0373927_0039602 3300035695 Bacteria 3059
92 Ga0373925_0000760 3300037068 Bacteria 29657
93 Ga0395899_0000516 3300037312 Bacteria 42796
94 Ga0395900_0000010 3300037418 Bacteria 461364
95 Ga0395898_0002619 3300037466 Bacteria 20927
96 Ga0395905_0053931 3300037471 Bacteria 3762
97 Ga0436364_1470150 3300037853 Bacteria 35135
98 Ga0395901_0000007 3300038443 Bacteria 497408
99 Ga0436360_1250562 3300039438 Bacteria 978
100 Ga0451577_0001384 3300042876 Bacteria 32492
101 Ga0453684_0003309 3300044712 Bacteria 36720
102 Ga0495592_0064491 3300046454 Bacteria 2685
103 Ga0495592_0086062 3300046454 Bacteria 2265
104 Ga0495629_0426354 3300046459 Bacteria 900
105 Ga0495638_0390827 3300046460 Bacteria 724
106 Ga0495641_0063211 3300046461 Bacteria 1669
107 Ga0495651_0271681 3300046462 Bacteria 1149
108 Ga0495653_0104966 3300046463 Bacteria 2041
109 Ga0495650_0070300 3300046471 Bacteria 1375
110 Ga0495608_0066647 3300046511 Bacteria 2357
111 Ga0495608_0287747 3300046511 Bacteria 1019
112 Ga0495618_0107319 3300046514 Bacteria 1788
113 Ga0495620_0037033 3300046515 Bacteria 2177
114 Ga0495628_0046769 3300046516 Bacteria 3435
115 Ga0495628_0124660 3300046516 Bacteria 1974
116 Ga0495630_0008061 3300046517 Bacteria 7573
117 Ga0495630_0173465 3300046517 Bacteria 1643
118 Ga0495643_0004412 3300046522 Bacteria 9852
119 Ga0495648_0174693 3300046524 Bacteria 1098
120 Ga0495642_0008445 3300046528 Bacteria 3941
121 Ga0495642_0098754 3300046528 Bacteria 1241
122 Ga0495642_0311998 3300046528 Bacteria 690
123 Ga0495652_0101749 3300046529 Bacteria 2329
124 Ga0495640_0022158 3300046533 Bacteria 4650
125 Ga0495640_0044561 3300046533 Bacteria 3084
126 Ga0495609_0027202 3300046538 Bacteria 2615
127 Ga0495597_0023161 3300046542 Bacteria 2874
128 Ga0495645_0078307 3300046543 Bacteria 2376
129 Ga0495622_0000804 3300046557 Bacteria 17378
130 Ga0495667_0040126 3300046559 Bacteria 3110
131 Ga0495668_0129893 3300046616 Bacteria 1379
132 Ga0495634_0156854 3300046642 Bacteria 1437
133 Ga0495657_0027574 3300046675 Bacteria 4006
134 Ga0495657_0073917 3300046675 Bacteria 2219
135 Ga0495599_0157660 3300046678 Bacteria 1404
136 Ga0495658_0025693 3300046683 Bacteria 3150
137 Ga0495669_0000005 3300046684 Bacteria 193971
138 Ga0495669_0009648 3300046684 Bacteria 4073
139 Ga0495669_0252964 3300046684 Bacteria 846
140 Ga0495613_0003661 3300046689 Bacteria 11519
141 Ga0495613_0036082 3300046689 Bacteria 3666
142 Ga0495613_0217250 3300046689 Bacteria 1343
143 Ga0495649_0000700 3300046694 Bacteria 27353
144 Ga0495600_0188590 3300046809 Bacteria 1327
145 Ga0495581_0022677 3300047315 Bacteria 3637
146 Ga0495636_0113889 3300047318 Bacteria 1192
147 Ga0495674_0055581 3300047319 Bacteria 3471
148 Ga0495674_0225716 3300047319 Bacteria 1547
149 Ga0495680_0124714 3300047322 Bacteria 1898
150 Ga0495680_0142530 3300047322 Bacteria 1752
151 Ga0495687_020985 3300047443 Bacteria 3173
152 Ga0495675_0181822 3300047444 Bacteria 1287
153 Ga0495677_0189160 3300047445 Bacteria 799
154 Ga0495684_0001405 3300047471 Bacteria 19281
155 Ga0495686_0008257 3300047472 Bacteria 7669
156 Ga0495593_0055787 3300047673 Bacteria 2078
157 Ga0496102_0048437 3300048905 Bacteria 3864
158 Ga0496103_0113494 3300048906 Bacteria 1722
159 Ga0496105_0278609 3300048908 Bacteria 1349
160 Ga0496115_0016136 3300048918 Bacteria 5680
161 Ga0496117_0068653 3300048920 Bacteria 2391
162 Ga0496117_0310502 3300048920 Bacteria 831
163 Ga0496118_0014817 3300048921 Bacteria 7271
164 Ga0496119_0047259 3300048922 Bacteria 2679
165 Ga0496120_0283587 3300048923 Bacteria 765
166 Ga0496121_0000009 3300048924 Bacteria 836971
167 Ga0496125_0335305 3300048928 Bacteria 910
168 Ga0501034_0613722 3300049571 Bacteria 992
169 Ga0501047_0012301 3300049581 Bacteria 8099
170 Ga0501047_0455031 3300049581 Bacteria 1109
171 Ga0501075_0360469 3300049591 Bacteria 1108
172 Ga0501238_006386 3300049671 Bacteria 1517
173 Ga0501079_0409598 3300049741 Bacteria 1064
174 nmdc:mga03683_70610_c1 3300050489 Bacteria 1492
175 nmdc:mga03n38_13950_c1 3300050490 Bacteria 3067
176 nmdc:mga00v17_436_c1 3300050491 Bacteria 23432
177 nmdc:mga0yw44_246897_c1 3300050492 Bacteria 1187
178 nmdc:mga0k408_280441_c1 3300050493 Bacteria 995
179 nmdc:mga06z11_313529_c1 3300050494 Bacteria 935
180 nmdc:mga04h51_4247_c1 3300050495 Bacteria 3545
181 nmdc:mga07m45_340_c1 3300050496 Bacteria 18991
182 nmdc:mga07m45_34990_c1 3300050496 Bacteria 2793
183 Ga0500635_0000131 3300053080 Bacteria 43413
184 Ga0500578_0170276 3300053086 Bacteria 1347
185 Ga0500647_0118017 3300053091 Bacteria 1257
186 Ga0500583_0037473 3300053092 Bacteria 2179
187 Ga0500651_0014267 3300053093 Bacteria 4860
188 Ga0500555_018370 3300053103 Bacteria 2015
189 Ga0500556_0003288 3300053104 Bacteria 4795
190 Ga0500562_013101 3300053108 Bacteria 2113
191 Ga0500569_008744 3300053109 Bacteria 2328
192 Ga0500595_000877 3300053119 Bacteria 17141
193 Ga0500595_062398 3300053119 Bacteria 1122
194 Ga0500607_088718 3300053121 Bacteria 1561
195 Ga0500607_117975 3300053121 Bacteria 1289
196 Ga0500608_108346 3300053122 Bacteria 1277
197 Ga0500642_0141891 3300053130 Bacteria 1127
198 Ga0500559_0000002 3300053136 Bacteria 262002
199 Ga0500559_0009673 3300053136 Bacteria 4163
200 Ga0500559_0012270 3300053136 Bacteria 3645
201 Ga0500620_015678 3300053155 Bacteria 2148
202 Ga0500638_038949 3300053162 Bacteria 2308
203 Ga0500636_0012655 3300053177 Bacteria 4946
204 Ga0500637_0000997 3300053178 Bacteria 11565
205 Ga0500576_103253 3300053725 Bacteria 1159
206 Ga0500625_018608 3300053729 Bacteria 3256
207 Ga0500596_001473 3300053735 Bacteria 4758
208 Ga0501082_0004694 3300060353 Bacteria 11914
209 Ga0530510_0504540 3300061734 Bacteria 917

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0409598 Ga0501079_0409598_148_732 157
2 3300053093 Ga0500651_0014267 Ga0500651_0014267_3060_3641 160
3 3300009093 Ga0105240_10008146 Ga0105240_1000814616 167
4 3300025913 Ga0207695_10001222 Ga0207695_100012226 167
5 3300005530 Ga0070679_100849368 Ga0070679_1008493682 177
6 3300006038 Ga0075365_10287125 Ga0075365_102871252 177
7 3300006051 Ga0075364_10536182 Ga0075364_105361822 177
8 3300025919 Ga0207657_10008582 Ga0207657_100085829 177
9 3300025921 Ga0207652_10904326 Ga0207652_109043262 177
10 3300049591 Ga0501075_0360469 Ga0501075_0360469_132_716 177
11 3300050492 nmdc:mga0yw44_246897_c1 nmdc:mga0yw44_246897_c1_242_820 177
12 3300061734 Ga0530510_0504540 Ga0530510_0504540_173_757 177
13 3300009551 Ga0105238_10034100 Ga0105238_100341002 178
14 3300025924 Ga0207694_10022332 Ga0207694_100223322 178
15 3300046528 Ga0495642_0098754 Ga0495642_0098754_299_892 178
16 3300046684 Ga0495669_0000005 Ga0495669_0000005_68327_68920 178
17 3300005548 Ga0070665_100000657 Ga0070665_10000065740 180
18 3300028379 Ga0268266_10000003 Ga0268266_10000003478 180
19 3300048918 Ga0496115_0016136 Ga0496115_0016136_2048_2641 180
20 3300005618 Ga0068864_100000182 Ga0068864_1000001829 181
21 3300005841 Ga0068863_100000101 Ga0068863_10000010185 181
22 3300026088 Ga0207641_10000109 Ga0207641_1000010967 181
23 3300026095 Ga0207676_10000337 Ga0207676_1000033717 181
24 3300033180 Ga0307510_10031149 Ga0307510_100311492 182
25 3300005841 Ga0068863_101391508 Ga0068863_1013915081 183
26 3300026088 Ga0207641_10783213 Ga0207641_107832132 183
27 3300053103 Ga0500555_018370 Ga0500555_018370_1096_1689 186
28 3300053104 Ga0500556_0003288 Ga0500556_0003288_2091_2684 186
29 3300031456 Ga0307513_10005326 Ga0307513_1000532612 187
30 3300042876 Ga0451577_0001384 Ga0451577_0001384_3664_4278 187
31 3300044712 Ga0453684_0003309 Ga0453684_0003309_6452_7066 187
32 3300049571 Ga0501034_0613722 Ga0501034_0613722_211_774 187
33 3300006038 Ga0075365_10038234 Ga0075365_100382342 188
34 3300021388 Ga0213875_10000928 Ga0213875_100009282 188
35 3300037853 Ga0436364_1470150 Ga0436364_1470150_15045_15626 188
36 3300046528 Ga0495642_0311998 Ga0495642_0311998_18_605 188
37 iso_pu_bacteria 2643221545 2643750428 188
38 iso_pu_bacteria 2643221691 2644507318 188
39 3300025284 Ga0209130_1020289 Ga0209130_10202892 189
40 3300035114 Ga0373939_0024074 Ga0373939_0024074_905_1495 189
41 3300046454 Ga0495592_0064491 Ga0495592_0064491_403_993 189
42 3300046454 Ga0495592_0086062 Ga0495592_0086062_64_642 189
43 3300046459 Ga0495629_0426354 Ga0495629_0426354_98_676 189
44 3300046461 Ga0495641_0063211 Ga0495641_0063211_734_1312 189
45 3300046462 Ga0495651_0271681 Ga0495651_0271681_301_879 189
46 3300046463 Ga0495653_0104966 Ga0495653_0104966_553_1143 189
47 3300046511 Ga0495608_0066647 Ga0495608_0066647_1168_1758 189
48 3300046511 Ga0495608_0287747 Ga0495608_0287747_90_668 189
49 3300046514 Ga0495618_0107319 Ga0495618_0107319_232_822 189
50 3300046516 Ga0495628_0046769 Ga0495628_0046769_1922_2512 189
51 3300046516 Ga0495628_0124660 Ga0495628_0124660_1115_1693 189
52 3300046517 Ga0495630_0008061 Ga0495630_0008061_3241_3831 189
53 3300046517 Ga0495630_0173465 Ga0495630_0173465_479_1057 189
54 3300046533 Ga0495640_0022158 Ga0495640_0022158_954_1532 189
55 3300046533 Ga0495640_0044561 Ga0495640_0044561_163_753 189
56 3300046543 Ga0495645_0078307 Ga0495645_0078307_896_1474 189
57 3300046559 Ga0495667_0040126 Ga0495667_0040126_1630_2208 189
58 3300046642 Ga0495634_0156854 Ga0495634_0156854_823_1413 189
59 3300046675 Ga0495657_0027574 Ga0495657_0027574_1009_1599 189
60 3300046675 Ga0495657_0073917 Ga0495657_0073917_1134_1712 189
61 3300046678 Ga0495599_0157660 Ga0495599_0157660_273_863 189
62 3300046683 Ga0495658_0025693 Ga0495658_0025693_1398_1988 189
63 3300046689 Ga0495613_0036082 Ga0495613_0036082_1166_1756 189
64 3300046689 Ga0495613_0217250 Ga0495613_0217250_90_668 189
65 3300046809 Ga0495600_0188590 Ga0495600_0188590_593_1171 189
66 3300047319 Ga0495674_0055581 Ga0495674_0055581_2121_2711 189
67 3300047319 Ga0495674_0225716 Ga0495674_0225716_670_1248 189
68 3300047322 Ga0495680_0124714 Ga0495680_0124714_924_1502 189
69 3300047322 Ga0495680_0142530 Ga0495680_0142530_455_1045 189
70 3300047444 Ga0495675_0181822 Ga0495675_0181822_639_1217 189
71 3300047471 Ga0495684_0001405 Ga0495684_0001405_16788_17378 189
72 3300037312 Ga0395899_0000516 Ga0395899_0000516_8238_8825 190
73 3300037418 Ga0395900_0000010 Ga0395900_0000010_23856_24443 190
74 3300037466 Ga0395898_0002619 Ga0395898_0002619_2598_3185 190
75 3300037471 Ga0395905_0053931 Ga0395905_0053931_1827_2414 190
76 3300038443 Ga0395901_0000007 Ga0395901_0000007_108218_108805 190
77 3300046528 Ga0495642_0008445 Ga0495642_0008445_1839_2429 190
78 3300047445 Ga0495677_0189160 Ga0495677_0189160_183_773 190
79 3300060353 Ga0501082_0004694 Ga0501082_0004694_1754_2326 190
80 3300005364 Ga0070673_101254787 Ga0070673_1012547871 191
81 3300005548 Ga0070665_100076664 Ga0070665_1000766642 191
82 3300005548 Ga0070665_100172760 Ga0070665_1001727602 191
83 3300005616 Ga0068852_100245295 Ga0068852_1002452952 191
84 3300005842 Ga0068858_100136020 Ga0068858_1001360202 191
85 3300005843 Ga0068860_100870593 Ga0068860_1008705932 191
86 3300005844 Ga0068862_100010088 Ga0068862_1000100882 191
87 3300009093 Ga0105240_10156101 Ga0105240_101561012 191
88 3300009101 Ga0105247_10090220 Ga0105247_100902202 191
89 3300009177 Ga0105248_11125428 Ga0105248_111254282 191
90 3300010375 Ga0105239_10383877 Ga0105239_103838772 191
91 3300013306 Ga0163162_10014012 Ga0163162_100140122 191
92 3300025913 Ga0207695_10138403 Ga0207695_101384032 191
93 3300025931 Ga0207644_10517806 Ga0207644_105178062 191
94 3300025941 Ga0207711_10980875 Ga0207711_109808751 191
95 3300026035 Ga0207703_10107578 Ga0207703_101075782 191
96 3300028379 Ga0268266_10081209 Ga0268266_100812092 191
97 3300028380 Ga0268265_10166203 Ga0268265_101662032 191
98 3300031456 Ga0307513_10037972 Ga0307513_100379722 191
99 3300046460 Ga0495638_0390827 Ga0495638_0390827_58_633 191
100 3300046694 Ga0495649_0000700 Ga0495649_0000700_1450_2025 191
101 3300047318 Ga0495636_0113889 Ga0495636_0113889_162_752 191
102 3300048908 Ga0496105_0278609 Ga0496105_0278609_351_947 191
103 3300048920 Ga0496117_0310502 Ga0496117_0310502_215_811 191
104 3300048923 Ga0496120_0283587 Ga0496120_0283587_17_613 191
105 3300049581 Ga0501047_0455031 Ga0501047_0455031_155_745 191
106 3300017792 Ga0163161_10525720 Ga0163161_105257202 192
107 3300046471 Ga0495650_0070300 Ga0495650_0070300_76_654 192
108 3300048922 Ga0496119_0047259 Ga0496119_0047259_361_966 192
109 3300048928 Ga0496125_0335305 Ga0496125_0335305_95_673 192
110 3300049671 Ga0501238_006386 Ga0501238_006386_200_778 192
111 3300053136 Ga0500559_0012270 Ga0500559_0012270_1539_2117 192
112 3300025250 Ga0209026_1000455 Ga0209026_10004559 193
113 3300028786 Ga0307517_10129746 Ga0307517_101297462 193
114 3300028800 Ga0265338_10064496 Ga0265338_100644963 193
115 3300005843 Ga0068860_100000023 Ga0068860_100000023105 194
116 3300005844 Ga0068862_100220493 Ga0068862_1002204932 194
117 3300009177 Ga0105248_11743570 Ga0105248_117435701 194
118 3300025941 Ga0207711_10249947 Ga0207711_102499472 194
119 3300028381 Ga0268264_10000008 Ga0268264_10000008154 194
120 3300028800 Ga0265338_10247319 Ga0265338_102473192 194
121 3300031247 Ga0265340_10073321 Ga0265340_100733212 194
122 3300049581 Ga0501047_0012301 Ga0501047_0012301_6449_7033 194
123 3300050489 nmdc:mga03683_70610_c1 nmdc:mga03683_70610_c1_13_597 194
124 3300053119 Ga0500595_062398 Ga0500595_062398_196_780 194
125 3300028800 Ga0265338_10046177 Ga0265338_100461773 195
126 3300031344 Ga0265316_10432191 Ga0265316_104321912 195
127 3300047472 Ga0495686_0008257 Ga0495686_0008257_4071_4859 195
128 3300006048 Ga0075363_100020323 Ga0075363_1000203232 196
129 3300025938 Ga0207704_10462681 Ga0207704_104626812 196
130 3300025949 Ga0207667_10695829 Ga0207667_106958292 196
131 3300031250 Ga0265331_10258677 Ga0265331_102586771 196
132 3300031251 Ga0265327_10017720 Ga0265327_100177202 196
133 3300031456 Ga0307513_10000471 Ga0307513_100004719 196
134 3300031711 Ga0265314_10127280 Ga0265314_101272802 196
135 3300039438 Ga0436360_1250562 Ga0436360_1250562_16_606 196
136 3300046616 Ga0495668_0129893 Ga0495668_0129893_543_1136 196
137 3300050490 nmdc:mga03n38_13950_c1 nmdc:mga03n38_13950_c1_493_1083 196
138 3300050493 nmdc:mga0k408_280441_c1 nmdc:mga0k408_280441_c1_202_792 196
139 3300050496 nmdc:mga07m45_340_c1 nmdc:mga07m45_340_c1_3414_4004 196
140 3300053108 Ga0500562_013101 Ga0500562_013101_1281_1871 196
141 3300053136 Ga0500559_0000002 Ga0500559_0000002_187689_188279 196
142 3300005331 Ga0070670_100218952 Ga0070670_1002189522 197
143 3300005347 Ga0070668_100810582 Ga0070668_1008105821 197
144 3300005457 Ga0070662_100788468 Ga0070662_1007884681 197
145 3300005614 Ga0068856_100363117 Ga0068856_1003631172 197
146 3300005842 Ga0068858_100000260 Ga0068858_10000026048 197
147 3300006042 Ga0075368_10015328 Ga0075368_100153282 197
148 3300006051 Ga0075364_10000257 Ga0075364_100002579 197
149 3300006178 Ga0075367_10002033 Ga0075367_100020333 197
150 3300009093 Ga0105240_10005089 Ga0105240_100050892 197
151 3300009174 Ga0105241_10305334 Ga0105241_103053342 197
152 3300009177 Ga0105248_10209149 Ga0105248_102091492 197
153 3300009545 Ga0105237_10706222 Ga0105237_107062222 197
154 3300009545 Ga0105237_11160927 Ga0105237_111609271 197
155 3300009551 Ga0105238_10469857 Ga0105238_104698572 197
156 3300009553 Ga0105249_10644887 Ga0105249_106448872 197
157 3300014968 Ga0157379_10120696 Ga0157379_101206962 197
158 3300025903 Ga0207680_10091160 Ga0207680_100911601 197
159 3300025913 Ga0207695_10006177 Ga0207695_100061772 197
160 3300025919 Ga0207657_10359775 Ga0207657_103597752 197
161 3300025941 Ga0207711_10028739 Ga0207711_100287394 197
162 3300026035 Ga0207703_10000113 Ga0207703_100001134 197
163 3300026095 Ga0207676_10956004 Ga0207676_109560042 197
164 3300028563 Ga0265319_1054243 Ga0265319_10542432 197
165 3300028577 Ga0265318_10022226 Ga0265318_100222262 197
166 3300031251 Ga0265327_10037043 Ga0265327_100370432 197
167 3300031616 Ga0307508_10248759 Ga0307508_102487592 197
168 3300035089 Ga0373944_0101828 Ga0373944_0101828_361_954 197
169 3300035171 Ga0373946_0047644 Ga0373946_0047644_706_1299 197
170 3300035695 Ga0373927_0039602 Ga0373927_0039602_1261_1854 197
171 3300037068 Ga0373925_0000760 Ga0373925_0000760_6525_7118 197
172 3300046515 Ga0495620_0037033 Ga0495620_0037033_1244_1837 197
173 3300046522 Ga0495643_0004412 Ga0495643_0004412_8587_9180 197
174 3300046524 Ga0495648_0174693 Ga0495648_0174693_333_926 197
175 3300046529 Ga0495652_0101749 Ga0495652_0101749_1003_1596 197
176 3300046538 Ga0495609_0027202 Ga0495609_0027202_260_853 197
177 3300046542 Ga0495597_0023161 Ga0495597_0023161_449_1042 197
178 3300046557 Ga0495622_0000804 Ga0495622_0000804_8061_8654 197
179 3300046684 Ga0495669_0009648 Ga0495669_0009648_2478_3071 197
180 3300046684 Ga0495669_0252964 Ga0495669_0252964_71_664 197
181 3300046689 Ga0495613_0003661 Ga0495613_0003661_3628_4221 197
182 3300047315 Ga0495581_0022677 Ga0495581_0022677_2613_3206 197
183 3300047443 Ga0495687_020985 Ga0495687_020985_745_1338 197
184 3300047673 Ga0495593_0055787 Ga0495593_0055787_421_1014 197
185 3300048905 Ga0496102_0048437 Ga0496102_0048437_1424_2017 197
186 3300048906 Ga0496103_0113494 Ga0496103_0113494_218_811 197
187 3300048920 Ga0496117_0068653 Ga0496117_0068653_623_1216 197
188 3300048921 Ga0496118_0014817 Ga0496118_0014817_3189_3782 197
189 3300048924 Ga0496121_0000009 Ga0496121_0000009_722069_722662 197
190 3300050491 nmdc:mga00v17_436_c1 nmdc:mga00v17_436_c1_3802_4395 197
191 3300050494 nmdc:mga06z11_313529_c1 nmdc:mga06z11_313529_c1_161_754 197
192 3300050495 nmdc:mga04h51_4247_c1 nmdc:mga04h51_4247_c1_2098_2691 197
193 3300050496 nmdc:mga07m45_34990_c1 nmdc:mga07m45_34990_c1_587_1180 197
194 3300053080 Ga0500635_0000131 Ga0500635_0000131_32622_33215 197
195 3300053086 Ga0500578_0170276 Ga0500578_0170276_270_863 197
196 3300053091 Ga0500647_0118017 Ga0500647_0118017_252_845 197
197 3300053092 Ga0500583_0037473 Ga0500583_0037473_816_1409 197
198 3300053109 Ga0500569_008744 Ga0500569_008744_416_1009 197
199 3300053119 Ga0500595_000877 Ga0500595_000877_6315_6908 197
200 3300053121 Ga0500607_088718 Ga0500607_088718_319_912 197
201 3300053121 Ga0500607_117975 Ga0500607_117975_370_963 197
202 3300053122 Ga0500608_108346 Ga0500608_108346_70_663 197
203 3300053130 Ga0500642_0141891 Ga0500642_0141891_496_1089 197
204 3300053136 Ga0500559_0009673 Ga0500559_0009673_297_890 197
205 3300053155 Ga0500620_015678 Ga0500620_015678_430_1023 197
206 3300053162 Ga0500638_038949 Ga0500638_038949_47_640 197
207 3300053177 Ga0500636_0012655 Ga0500636_0012655_3868_4461 197
208 3300053178 Ga0500637_0000997 Ga0500637_0000997_1783_2376 197
209 3300053725 Ga0500576_103253 Ga0500576_103253_275_868 197
210 3300053729 Ga0500625_018608 Ga0500625_018608_1663_2256 197
211 3300053735 Ga0500596_001473 Ga0500596_001473_497_1090 197

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02669

KdpC

K+-transporting ATPase, c chain

5

185

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hra-assembly1.cif.gz_C cryo-em structure of the kdpfabc complex in an e1 outward-facing state (state 1) 0.755 6 187
7bh2-assembly1.cif.gz_C cryo-em structure of kdpfabc in e2pi state with bef3 and k+ 0.7549 5 187
6hra-assembly1.cif.gz_C cryo-em structure of the kdpfabc complex in an e1 outward-facing state (state 1) 0.7333 6 187
7bh2-assembly1.cif.gz_C cryo-em structure of kdpfabc in e2pi state with bef3 and k+ 0.726 5 187
7e9f-assembly1.cif.gz_D cryo-em structure of the 2:1 orc1 bah domain in complex with nucleosome 0.5368 85 121
ID Description Score Start End Superfamily
af_Q8I430_342_765_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.6564 135 191 3.40.50.200
af_Q6Z244_4_324_2.60.120.330 Mainly Beta;Sandwich;Jelly Rolls;B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.6002 134 160 2.60.120.330
af_A8MZ26_12_180_1.10.238.10 Mainly Alpha;Orthogonal Bundle;Recoverin; domain 1;EF-hand 0.5194 129 184 1.10.238.10
af_A0A1D6FSW5_203_270_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.4759 130 180 1.10.10.10
af_O94424_188_254_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.4535 130 180 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5J4KYI9-F1-model_v4 Potassium-transporting ATPase subunit C 0.9834 151 188 GO:0008556
GO:0016020
AF-A0A7K2VFX8-F1-model_v4 Potassium-transporting ATPase subunit C 0.9784 116 187 GO:0005524
GO:0005886
GO:0008556
AF-A0A2V6URK3-F1-model_v4 Potassium-transporting ATPase subunit C (EC 3.6.3.12) 0.9726 114 187 GO:0005524
GO:0005886
GO:0008556
GO:0016787
AF-I3E0A1-F1-model_v4 Potassium-transporting ATPase C chain 0.9715 116 187 GO:0005524
GO:0005886
GO:0008556
AF-A0A2S9FLH2-F1-model_v4 Potassium-transporting ATPase subunit C 0.9677 116 187 GO:0005524
GO:0005886
GO:0008556

Feature Viewer

pLDDT pTM Quality
83.3 0.7 High
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Predicted Structure (AlphaFold2)

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