F320716

General Info

Members Datasets Scaffolds Average Seq Length
210 146 210 614

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0020888|Ga0466967_0020888_3044_5008
Length 647
Sequence MAERRLHGLQRVLGTNALFATAYGNVGSSIYYALGLVTPLVFIITGLFFYMTAASYAEATAMFPEAGGSSSFARRAFNEFWSFFAAWAGMLTYTITVSISAYFVPHYIGGLFWDALRHPPGDVIGGALVIVVLCAINVFGAKESTGVNVALAVVDFATQLLLVVIGIFVVLSPHTLQANVHLGTAPTWSQFLLAIPIGMLAYTGIETISNMAEEAKDEHRSIPASINRVRLAVFAIYFTLPSVALSALPVKVAQAGDAVVRNGAVNPGDHYTLLGLTEPQGGFAGDPILGLVKHLDLGPLQSVGEIYVGLLAATILFLATNAGLIGVSRLVYSMGIHRQMPDALRRLHPKFGTPWIGILMFGGIAIVACLPGKANFLGSIYSFGALLSFTIAHVSVARLRATRPDTPRPYRGPGNVRIRGYDAPLFALVGGTFTGLAFIVICILTPTVAFTGIGWMILGILVYIPYRRRQGLDLTSTHKVAIPQPVTDHEAEYDSVLIAFNAEDGFDDRLMATAAKLAARRRHGIHVLVTIPVPYAKPVRAPMPELEAAADSIIEQARVQGGRRVTGHWEKVRPGQAGRRVIEEAEDMRASAIVIGMPRRVAGASLFGKTLETVLADRPCRVVIESSPADGAARRAHQTALRAQAVA

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0.48
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.9
Nodule 0
Rhizoplane 10
Rhizosphere 85.71
Stem 0
Stem Tuber 0
Unclassified 2.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002235 3300000549 Bacteria 2728
2 JGI25406J46586_10002228 3300003203 Bacteria 9148
3 JGI25407J50210_10000215 3300003373 Bacteria 9891
4 Ga0070683_100010828 3300005329 Bacteria 7849
5 Ga0070680_100015053 3300005336 Bacteria 6055
6 Ga0068868_100020738 3300005338 Bacteria 4944
7 Ga0070660_100005900 3300005339 Bacteria 8471
8 Ga0070691_10009248 3300005341 Bacteria 4503
9 Ga0070668_100014308 3300005347 Bacteria 5928
10 Ga0070675_100007058 3300005354 Bacteria 8641
11 Ga0070659_100010684 3300005366 Bacteria 6763
12 Ga0070659_100018812 3300005366 Bacteria 5216
13 Ga0070714_100028140 3300005435 Bacteria 4660
14 Ga0070700_100007225 3300005441 Bacteria 5984
15 Ga0070678_100042758 3300005456 Bacteria 3223
16 Ga0070662_100023233 3300005457 Bacteria 4258
17 Ga0070665_100106093 3300005548 Bacteria 2812
18 Ga0068854_100032717 3300005578 Bacteria 3620
19 Ga0068856_100004619 3300005614 Bacteria 13674
20 Ga0068856_100016272 3300005614 Bacteria 7196
21 Ga0070702_100020535 3300005615 Bacteria 3462
22 Ga0068852_100031551 3300005616 Bacteria 4374
23 Ga0068861_100088609 3300005719 Bacteria 2437
24 Ga0068858_100124324 3300005842 Bacteria 2415
25 Ga0081538_10000064 3300005981 Bacteria 99059
26 Ga0081538_10000124 3300005981 Bacteria 78084
27 Ga0081538_10000237 3300005981 Bacteria 62261
28 Ga0081538_10000272 3300005981 Bacteria 59231
29 Ga0081538_10006020 3300005981 Bacteria 10778
30 Ga0081538_10060145 3300005981 Bacteria 2188
31 Ga0081539_10005426 3300005985 Bacteria 13023
32 Ga0070717_10000004 3300006028 Bacteria 365525
33 Ga0070712_100000001 3300006175 Bacteria 343916
34 Ga0070712_100000002 3300006175 Bacteria 288475
35 Ga0075428_100008776 3300006844 Bacteria 11217
36 Ga0075428_100051285 3300006844 Bacteria 4525
37 Ga0075428_100052899 3300006844 Bacteria 4449
38 Ga0075430_100000796 3300006846 Bacteria 24488
39 Ga0075430_100020712 3300006846 Bacteria 5593
40 Ga0075431_100006918 3300006847 Bacteria 11276
41 Ga0075433_10021578 3300006852 Bacteria 5401
42 Ga0105240_10051902 3300009093 Bacteria 5157
43 Ga0111539_10051781 3300009094 Bacteria 4888
44 Ga0111539_10094573 3300009094 Bacteria 3511
45 Ga0105245_10008673 3300009098 Bacteria 8867
46 Ga0105245_10012931 3300009098 Bacteria 7275
47 Ga0105245_10037969 3300009098 Bacteria 4283
48 Ga0114129_10002807 3300009147 Bacteria 24300
49 Ga0105248_10064559 3300009177 Bacteria 4110
50 Ga0105239_10002139 3300010375 Bacteria 25420
51 Ga0157374_10003220 3300013296 Bacteria 13709
52 Ga0157372_10008895 3300013307 Bacteria 10667
53 Ga0157375_10007973 3300013308 Bacteria 9270
54 Ga0163163_10021462 3300014325 Bacteria 6095
55 Ga0163163_10097301 3300014325 Bacteria 2963
56 Ga0157377_10000712 3300014745 Bacteria 13738
57 Ga0206353_11741713 3300020082 Bacteria 5333
58 Ga0213875_10014100 3300021388 Bacteria 3907
59 Ga0207688_10001478 3300025901 Bacteria 12310
60 Ga0207688_10049679 3300025901 Bacteria 2345
61 Ga0207693_10000003 3300025915 Bacteria 245977
62 Ga0207693_10000014 3300025915 Bacteria 148984
63 Ga0207693_10001785 3300025915 Bacteria 18862
64 Ga0207693_10030926 3300025915 Bacteria 4229
65 Ga0207660_10069245 3300025917 Bacteria 2561
66 Ga0207657_10053946 3300025919 Bacteria 3479
67 Ga0207657_10089952 3300025919 Bacteria 2562
68 Ga0207652_10048026 3300025921 Bacteria 3647
69 Ga0207659_10040788 3300025926 Bacteria 3249
70 Ga0207687_10008938 3300025927 Bacteria 6551
71 Ga0207687_10052418 3300025927 Bacteria 2847
72 Ga0207664_10000006 3300025929 Bacteria 408702
73 Ga0207664_10012198 3300025929 Bacteria 6142
74 Ga0207690_10005680 3300025932 Bacteria 7375
75 Ga0207690_10067697 3300025932 Bacteria 2450
76 Ga0207706_10013869 3300025933 Bacteria 7310
77 Ga0207706_10025993 3300025933 Bacteria 5242
78 Ga0207709_10011629 3300025935 Bacteria 4852
79 Ga0207661_10011764 3300025944 Bacteria 6353
80 Ga0207661_10084062 3300025944 Bacteria 2635
81 Ga0207661_10127679 3300025944 Bacteria 2174
82 Ga0207677_10003480 3300026023 Bacteria 8349
83 Ga0207678_10042442 3300026067 Bacteria 3940
84 Ga0207708_10000458 3300026075 Bacteria 31689
85 Ga0207702_10008939 3300026078 Bacteria 8447
86 Ga0207676_10007544 3300026095 Bacteria 7720
87 Ga0207675_100003786 3300026118 Bacteria 14728
88 Ga0207675_100111460 3300026118 Bacteria 2582
89 Ga0207683_10057786 3300026121 Bacteria 3405
90 Ga0207428_10019936 3300027907 Bacteria 5710
91 Ga0265326_10000060 3300028558 Bacteria 64091
92 Ga0265319_1000290 3300028563 Bacteria 37283
93 Ga0265334_10000012 3300028573 Bacteria 174358
94 Ga0265336_10001199 3300028666 Bacteria 12314
95 Ga0265324_10000854 3300029957 Bacteria 19594
96 Ga0307408_100051455 3300031548 Bacteria 2967
97 Ga0307413_10013575 3300031824 Bacteria 4100
98 Ga0307410_10029920 3300031852 Bacteria 3474
99 Ga0307406_10020556 3300031901 Bacteria 3890
100 Ga0307407_10033741 3300031903 Bacteria 2795
101 Ga0307409_100001938 3300031995 Bacteria 10571
102 Ga0307409_100030966 3300031995 Bacteria 3853
103 Ga0307409_100049001 3300031995 Bacteria 3218
104 Ga0307409_100054422 3300031995 Bacteria 3082
105 Ga0307409_100143062 3300031995 Bacteria 2064
106 Ga0307416_100024556 3300032002 Bacteria 4403
107 Ga0307416_100114055 3300032002 Bacteria 2390
108 Ga0307414_10054021 3300032004 Bacteria 2805
109 Ga0307411_10060398 3300032005 Bacteria 2517
110 Ga0307415_100010813 3300032126 Bacteria 5186
111 Ga0307415_100035929 3300032126 Bacteria 3241
112 Ga0307415_100077287 3300032126 Bacteria 2363
113 Ga0373933_0056512 3300035724 Bacteria 2356
114 Ga0373937_0020337 3300036401 Bacteria 5951
115 Ga0395899_0045714 3300037312 Bacteria 3262
116 Ga0395900_0014340 3300037418 Bacteria 8092
117 Ga0395898_0004317 3300037466 Bacteria 15579
118 Ga0395898_0044778 3300037466 Bacteria 4353
119 Ga0395898_0074230 3300037466 Bacteria 3285
120 Ga0395905_0006750 3300037471 Bacteria 11494
121 Ga0436364_0156576 3300037853 Bacteria 27121
122 Ga0436364_0630543 3300037853 Bacteria 5457
123 Ga0395901_0019468 3300038443 Bacteria 6940
124 Ga0395901_0079754 3300038443 Bacteria 3418
125 Ga0395901_0083329 3300038443 Bacteria 3342
126 Ga0436365_0142551 3300039437 Bacteria 55439
127 Ga0436365_0803855 3300039437 Bacteria 5775
128 Ga0466966_0006990 3300044684 Bacteria 7473
129 Ga0466963_0008327 3300044694 Bacteria 6211
130 Ga0466963_0012784 3300044694 Bacteria 5143
131 Ga0466963_0050408 3300044694 Bacteria 2755
132 Ga0466971_0001538 3300044719 Bacteria 9710
133 Ga0466957_0033220 3300044842 Bacteria 3094
134 Ga0466959_0026008 3300045049 Bacteria 4340
135 Ga0466959_0078185 3300045049 Bacteria 2386
136 Ga0466958_0001097 3300045836 Bacteria 12473
137 Ga0466958_0032418 3300045836 Bacteria 3108
138 Ga0466967_0013796 3300045976 Bacteria 6262
139 Ga0466967_0020888 3300045976 Bacteria 5305
140 Ga0466967_0048793 3300045976 Bacteria 3700
141 Ga0466967_0051974 3300045976 Bacteria 3594
142 Ga0495651_0000748 3300046462 Bacteria 25124
143 Ga0495653_0016937 3300046463 Bacteria 5928
144 Ga0495650_0000264 3300046471 Bacteria 101105
145 Ga0495608_0003042 3300046511 Bacteria 11977
146 Ga0495667_0001977 3300046559 Bacteria 13571
147 Ga0495634_0010330 3300046642 Bacteria 6841
148 Ga0495657_0012983 3300046675 Bacteria 6165
149 Ga0495646_0004494 3300046680 Bacteria 8787
150 Ga0495600_0003790 3300046809 Bacteria 8952
151 Ga0495604_0006139 3300047317 Bacteria 9533
152 Ga0495672_0019788 3300047320 Bacteria 4430
153 Ga0495680_0014731 3300047322 Bacteria 6759
154 Ga0496100_0004036 3300048903 Bacteria 7733
155 Ga0496101_0000435 3300048904 Bacteria 26704
156 Ga0496101_0012232 3300048904 Bacteria 5721
157 Ga0496102_0040085 3300048905 Bacteria 4235
158 Ga0496103_0044129 3300048906 Bacteria 2746
159 Ga0496104_0009264 3300048907 Bacteria 8755
160 Ga0496105_0022673 3300048908 Bacteria 5087
161 Ga0496108_0025085 3300048911 Bacteria 4912
162 Ga0496109_0001828 3300048912 Bacteria 17670
163 Ga0496109_0007318 3300048912 Bacteria 9333
164 Ga0496110_0001753 3300048913 Bacteria 16001
165 Ga0496111_0002700 3300048914 Bacteria 10777
166 Ga0496111_0024584 3300048914 Bacteria 4244
167 Ga0496111_0088015 3300048914 Bacteria 2274
168 Ga0496112_0000322 3300048915 Bacteria 30819
169 Ga0496112_0002526 3300048915 Bacteria 14775
170 Ga0496112_0002590 3300048915 Bacteria 14610
171 Ga0496112_0026246 3300048915 Bacteria 5602
172 Ga0496112_0050927 3300048915 Bacteria 4061
173 Ga0496113_0002086 3300048916 Bacteria 11507
174 Ga0496115_0065264 3300048918 Bacteria 2940
175 Ga0501036_0002983 3300049572 Bacteria 13450
176 Ga0501038_0050148 3300049574 Bacteria 3608
177 Ga0501038_0063022 3300049574 Bacteria 3166
178 Ga0501039_0040947 3300049575 Bacteria 3577
179 Ga0501039_0095458 3300049575 Bacteria 2318
180 Ga0501041_0019673 3300049577 Bacteria 4033
181 Ga0501042_0044925 3300049578 Bacteria 3148
182 Ga0501046_0032093 3300049580 Bacteria 4254
183 Ga0501048_0083900 3300049582 Bacteria 2247
184 Ga0501069_0031531 3300049585 Bacteria 2915
185 Ga0501071_0064337 3300049587 Bacteria 2661
186 Ga0501071_0078760 3300049587 Bacteria 2409
187 Ga0501072_0074229 3300049588 Bacteria 2689
188 Ga0501079_0049501 3300049741 Bacteria 3243
189 Ga0501080_0019756 3300049742 Bacteria 6238
190 Ga0501081_0034927 3300049743 Bacteria 3422
191 Ga0501081_0067026 3300049743 Bacteria 2497
192 Ga0501081_0097352 3300049743 Bacteria 2076
193 Ga0501035_0008368 3300049822 Bacteria 9630
194 nmdc:mga05p37_29540_c1 3300050507 Bacteria 6689
195 nmdc:mga0qj67_3324_c1 3300050509 Bacteria 11595
196 nmdc:mga0qj67_8807_c1 3300050509 Bacteria 7488
197 nmdc:mga06r32_26849_c1 3300050510 Bacteria 5373
198 nmdc:mga06r32_37539_c1 3300050510 Bacteria 4583
199 nmdc:mga08y16_39218_c1 3300050511 Bacteria 4970
200 Ga0495655_0005022 3300053083 Bacteria 2309
201 Ga0495619_0013400 3300053085 Bacteria 5166
202 Ga0500556_0001609 3300053104 Bacteria 8946
203 Ga0500616_0002022 3300053153 Bacteria 17902
204 Ga0500616_0006300 3300053153 Bacteria 7798
205 Ga0500599_002361 3300053736 Bacteria 2262
206 Ga0501084_0063038 3300054114 Bacteria 3103
207 Ga0501082_0148031 3300060353 Bacteria 2039
208 Ga0466962_0000506 3300061719 Bacteria 16962
209 Ga0466962_0048981 3300061719 Bacteria 2019
210 Ga0530510_0036824 3300061734 Bacteria 3525

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045049 Ga0466959_0078185 Ga0466959_0078185_16_1620 481
2 3300053736 Ga0500599_002361 Ga0500599_002361_645_2252 507
3 3300044684 Ga0466966_0006990 Ga0466966_0006990_445_2337 512
4 3300013308 Ga0157375_10007973 Ga0157375_100079734 522
5 3300037466 Ga0395898_0074230 Ga0395898_0074230_1222_3132 526
6 3300038443 Ga0395901_0083329 Ga0395901_0083329_139_2049 526
7 3300048915 Ga0496112_0050927 Ga0496112_0050927_525_2417 529
8 3300005339 Ga0070660_100005900 Ga0070660_1000059007 530
9 3300025919 Ga0207657_10053946 Ga0207657_100539463 530
10 3300049742 Ga0501080_0019756 Ga0501080_0019756_92_1987 530
11 3300006852 Ga0075433_10021578 Ga0075433_100215782 531
12 3300050510 nmdc:mga06r32_37539_c1 nmdc:mga06r32_37539_c1_1971_3902 531
13 3300049743 Ga0501081_0097352 Ga0501081_0097352_30_1721 537
14 3300025919 Ga0207657_10089952 Ga0207657_100899521 549
15 3300005329 Ga0070683_100010828 Ga0070683_1000108283 557
16 3300005338 Ga0068868_100020738 Ga0068868_1000207383 557
17 3300005341 Ga0070691_10009248 Ga0070691_100092482 557
18 3300005354 Ga0070675_100007058 Ga0070675_1000070585 557
19 3300005366 Ga0070659_100018812 Ga0070659_1000188125 557
20 3300005441 Ga0070700_100007225 Ga0070700_1000072254 557
21 3300005456 Ga0070678_100042758 Ga0070678_1000427583 557
22 3300005457 Ga0070662_100023233 Ga0070662_1000232332 557
23 3300005614 Ga0068856_100004619 Ga0068856_1000046197 557
24 3300009098 Ga0105245_10008673 Ga0105245_1000867310 557
25 3300009177 Ga0105248_10064559 Ga0105248_100645593 557
26 3300010375 Ga0105239_10002139 Ga0105239_100021392 557
27 3300013307 Ga0157372_10008895 Ga0157372_1000889511 557
28 3300014325 Ga0163163_10021462 Ga0163163_100214624 557
29 3300014745 Ga0157377_10000712 Ga0157377_100007128 557
30 3300025901 Ga0207688_10001478 Ga0207688_100014784 557
31 3300025915 Ga0207693_10030926 Ga0207693_100309263 557
32 3300025926 Ga0207659_10040788 Ga0207659_100407882 557
33 3300025927 Ga0207687_10008938 Ga0207687_100089383 557
34 3300025932 Ga0207690_10005680 Ga0207690_100056802 557
35 3300025933 Ga0207706_10025993 Ga0207706_100259933 557
36 3300025944 Ga0207661_10011764 Ga0207661_100117643 557
37 3300026023 Ga0207677_10003480 Ga0207677_100034805 557
38 3300026067 Ga0207678_10042442 Ga0207678_100424423 557
39 3300026075 Ga0207708_10000458 Ga0207708_1000045811 557
40 3300026078 Ga0207702_10008939 Ga0207702_100089396 557
41 3300026095 Ga0207676_10007544 Ga0207676_100075448 557
42 3300026121 Ga0207683_10057786 Ga0207683_100577863 557
43 3300039437 Ga0436365_0803855 Ga0436365_0803855_2872_4761 557
44 3300048904 Ga0496101_0012232 Ga0496101_0012232_952_2883 557
45 3300048905 Ga0496102_0040085 Ga0496102_0040085_498_2429 557
46 3300048906 Ga0496103_0044129 Ga0496103_0044129_422_2353 557
47 3300048907 Ga0496104_0009264 Ga0496104_0009264_4592_6523 557
48 3300048908 Ga0496105_0022673 Ga0496105_0022673_895_2826 557
49 3300048911 Ga0496108_0025085 Ga0496108_0025085_1372_3303 557
50 3300048912 Ga0496109_0007318 Ga0496109_0007318_2390_4321 557
51 3300048913 Ga0496110_0001753 Ga0496110_0001753_4667_6598 557
52 3300048914 Ga0496111_0002700 Ga0496111_0002700_3599_5530 557
53 3300048916 Ga0496113_0002086 Ga0496113_0002086_4976_6907 557
54 3300048918 Ga0496115_0065264 Ga0496115_0065264_976_2907 557
55 3300005435 Ga0070714_100028140 Ga0070714_1000281403 558
56 3300025915 Ga0207693_10001785 Ga0207693_100017856 558
57 3300035724 Ga0373933_0056512 Ga0373933_0056512_172_2064 558
58 3300036401 Ga0373937_0020337 Ga0373937_0020337_2490_4382 558
59 3300046462 Ga0495651_0000748 Ga0495651_0000748_1504_3396 558
60 3300046463 Ga0495653_0016937 Ga0495653_0016937_2500_4392 558
61 3300046511 Ga0495608_0003042 Ga0495608_0003042_1357_3249 558
62 3300046559 Ga0495667_0001977 Ga0495667_0001977_6606_8498 558
63 3300046642 Ga0495634_0010330 Ga0495634_0010330_3820_5712 558
64 3300046675 Ga0495657_0012983 Ga0495657_0012983_2711_4603 558
65 3300046680 Ga0495646_0004494 Ga0495646_0004494_2963_4855 558
66 3300046809 Ga0495600_0003790 Ga0495600_0003790_6109_8001 558
67 3300047317 Ga0495604_0006139 Ga0495604_0006139_5310_7202 558
68 3300047322 Ga0495680_0014731 Ga0495680_0014731_3893_5785 558
69 3300053085 Ga0495619_0013400 Ga0495619_0013400_1701_3593 558
70 3300005347 Ga0070668_100014308 Ga0070668_1000143082 562
71 3300026118 Ga0207675_100003786 Ga0207675_1000037862 562
72 3300006175 Ga0070712_100000002 Ga0070712_100000002269 563
73 3300025915 Ga0207693_10000014 Ga0207693_10000014119 563
74 3300048915 Ga0496112_0000322 Ga0496112_0000322_7337_9241 563
75 3300044694 Ga0466963_0008327 Ga0466963_0008327_154_2049 564
76 3300005985 Ga0081539_10005426 Ga0081539_100054262 566
77 3300046471 Ga0495650_0000264 Ga0495650_0000264_15496_17409 566
78 3300053153 Ga0500616_0006300 Ga0500616_0006300_3783_5696 566
79 3300045836 Ga0466958_0032418 Ga0466958_0032418_33_1880 568
80 3300005336 Ga0070680_100015053 Ga0070680_1000150533 569
81 3300005366 Ga0070659_100010684 Ga0070659_1000106841 569
82 3300005614 Ga0068856_100016272 Ga0068856_1000162728 569
83 3300005616 Ga0068852_100031551 Ga0068852_1000315512 569
84 3300009093 Ga0105240_10051902 Ga0105240_100519023 569
85 3300020082 Ga0206353_11741713 Ga0206353_117417133 569
86 3300025917 Ga0207660_10069245 Ga0207660_100692453 569
87 3300025932 Ga0207690_10067697 Ga0207690_100676973 569
88 3300025944 Ga0207661_10084062 Ga0207661_100840623 569
89 3300048915 Ga0496112_0002526 Ga0496112_0002526_1068_2975 569
90 3300021388 Ga0213875_10014100 Ga0213875_100141002 570
91 3300037853 Ga0436364_0156576 Ga0436364_0156576_5920_7812 570
92 3300039437 Ga0436365_0142551 Ga0436365_0142551_47223_49115 570
93 3300025929 Ga0207664_10000006 Ga0207664_1000000631 571
94 3300044694 Ga0466963_0012784 Ga0466963_0012784_2539_4407 571
95 3300044719 Ga0466971_0001538 Ga0466971_0001538_4526_6394 571
96 3300044842 Ga0466957_0033220 Ga0466957_0033220_851_2719 571
97 3300045836 Ga0466958_0001097 Ga0466958_0001097_6116_7984 571
98 3300061719 Ga0466962_0000506 Ga0466962_0000506_13760_15628 571
99 3300045976 Ga0466967_0013796 Ga0466967_0013796_155_2062 572
100 3300003203 JGI25406J46586_10002228 JGI25406J46586_100022283 573
101 3300006175 Ga0070712_100000001 Ga0070712_100000001273 573
102 3300025915 Ga0207693_10000003 Ga0207693_1000000346 573
103 3300005981 Ga0081538_10000064 Ga0081538_1000006443 575
104 3300048903 Ga0496100_0004036 Ga0496100_0004036_3767_5692 575
105 3300048904 Ga0496101_0000435 Ga0496101_0000435_13004_14929 575
106 3300050511 nmdc:mga08y16_39218_c1 nmdc:mga08y16_39218_c1_529_2373 576
107 3300014325 Ga0163163_10097301 Ga0163163_100973013 577
108 3300048915 Ga0496112_0026246 Ga0496112_0026246_663_2534 577
109 3300006028 Ga0070717_10000004 Ga0070717_10000004369 580
110 3300013296 Ga0157374_10003220 Ga0157374_100032204 580
111 3300025929 Ga0207664_10012198 Ga0207664_100121983 580
112 3300028558 Ga0265326_10000060 Ga0265326_1000006011 580
113 3300028563 Ga0265319_1000290 Ga0265319_100029023 580
114 3300028573 Ga0265334_10000012 Ga0265334_1000001211 580
115 3300028666 Ga0265336_10001199 Ga0265336_1000119911 580
116 3300029957 Ga0265324_10000854 Ga0265324_1000085410 580
117 3300048914 Ga0496111_0024584 Ga0496111_0024584_925_2844 580
118 3300049578 Ga0501042_0044925 Ga0501042_0044925_24_1919 581
119 3300025921 Ga0207652_10048026 Ga0207652_100480262 582
120 3300032004 Ga0307414_10054021 Ga0307414_100540212 583
121 3300037853 Ga0436364_0630543 Ga0436364_0630543_1539_3428 583
122 3300044694 Ga0466963_0050408 Ga0466963_0050408_649_2538 583
123 3300045049 Ga0466959_0026008 Ga0466959_0026008_531_2420 583
124 3300049575 Ga0501039_0040947 Ga0501039_0040947_326_2212 584
125 3300049743 Ga0501081_0034927 Ga0501081_0034927_1282_3168 584
126 3300060353 Ga0501082_0148031 Ga0501082_0148031_15_1901 584
127 3300031995 Ga0307409_100049001 Ga0307409_1000490013 585
128 3300032005 Ga0307411_10060398 Ga0307411_100603983 585
129 3300032126 Ga0307415_100035929 Ga0307415_1000359292 585
130 3300047320 Ga0495672_0019788 Ga0495672_0019788_417_2324 585
131 3300049574 Ga0501038_0050148 Ga0501038_0050148_1251_3149 585
132 3300049575 Ga0501039_0095458 Ga0501039_0095458_199_2097 585
133 3300049577 Ga0501041_0019673 Ga0501041_0019673_1543_3438 585
134 3300049582 Ga0501048_0083900 Ga0501048_0083900_31_1926 585
135 3300049587 Ga0501071_0064337 Ga0501071_0064337_146_2044 585
136 3300049587 Ga0501071_0078760 Ga0501071_0078760_253_2139 585
137 3300049588 Ga0501072_0074229 Ga0501072_0074229_531_2426 585
138 3300049741 Ga0501079_0049501 Ga0501079_0049501_1222_3120 585
139 3300049743 Ga0501081_0067026 Ga0501081_0067026_131_2029 585
140 3300061734 Ga0530510_0036824 Ga0530510_0036824_531_2426 585
141 3300045976 Ga0466967_0048793 Ga0466967_0048793_1245_3155 586
142 3300048912 Ga0496109_0001828 Ga0496109_0001828_15207_17153 586
143 3300048915 Ga0496112_0002590 Ga0496112_0002590_5872_7782 587
144 3300049572 Ga0501036_0002983 Ga0501036_0002983_11426_13333 587
145 3300049574 Ga0501038_0063022 Ga0501038_0063022_1115_3022 587
146 3300049580 Ga0501046_0032093 Ga0501046_0032093_494_2401 587
147 3300049585 Ga0501069_0031531 Ga0501069_0031531_785_2692 587
148 3300049822 Ga0501035_0008368 Ga0501035_0008368_3326_5233 587
149 3300054114 Ga0501084_0063038 Ga0501084_0063038_182_2089 587
150 3300003373 JGI25407J50210_10000215 JGI25407J50210_100002156 588
151 3300005578 Ga0068854_100032717 Ga0068854_1000327172 588
152 3300005615 Ga0070702_100020535 Ga0070702_1000205352 588
153 3300005842 Ga0068858_100124324 Ga0068858_1001243242 588
154 3300005981 Ga0081538_10000272 Ga0081538_1000027260 588
155 3300006844 Ga0075428_100008776 Ga0075428_1000087768 588
156 3300006844 Ga0075428_100052899 Ga0075428_1000528991 588
157 3300006846 Ga0075430_100000796 Ga0075430_10000079623 588
158 3300006847 Ga0075431_100006918 Ga0075431_1000069188 588
159 3300009098 Ga0105245_10012931 Ga0105245_100129312 588
160 3300009098 Ga0105245_10037969 Ga0105245_100379693 588
161 3300025927 Ga0207687_10052418 Ga0207687_100524182 588
162 3300025933 Ga0207706_10013869 Ga0207706_100138694 588
163 3300025935 Ga0207709_10011629 Ga0207709_100116292 588
164 3300026118 Ga0207675_100111460 Ga0207675_1001114603 588
165 3300031995 Ga0307409_100030966 Ga0307409_1000309663 588
166 3300045976 Ga0466967_0051974 Ga0466967_0051974_1615_3504 588
167 3300050509 nmdc:mga0qj67_3324_c1 nmdc:mga0qj67_3324_c1_1485_3368 588
168 3300050510 nmdc:mga06r32_26849_c1 nmdc:mga06r32_26849_c1_1777_3660 588
169 3300053104 Ga0500556_0001609 Ga0500556_0001609_5359_7269 588
170 3300053153 Ga0500616_0002022 Ga0500616_0002022_11461_13371 588
171 3300005548 Ga0070665_100106093 Ga0070665_1001060932 589
172 3300005719 Ga0068861_100088609 Ga0068861_1000886093 589
173 3300005981 Ga0081538_10000237 Ga0081538_1000023729 589
174 3300005981 Ga0081538_10006020 Ga0081538_100060209 589
175 3300006846 Ga0075430_100020712 Ga0075430_1000207122 589
176 3300009094 Ga0111539_10051781 Ga0111539_100517814 589
177 3300009147 Ga0114129_10002807 Ga0114129_100028078 589
178 3300025901 Ga0207688_10049679 Ga0207688_100496792 589
179 3300025944 Ga0207661_10127679 Ga0207661_101276792 589
180 3300027907 Ga0207428_10019936 Ga0207428_100199362 589
181 3300031548 Ga0307408_100051455 Ga0307408_1000514553 589
182 3300031824 Ga0307413_10013575 Ga0307413_100135753 589
183 3300031852 Ga0307410_10029920 Ga0307410_100299203 589
184 3300031901 Ga0307406_10020556 Ga0307406_100205563 589
185 3300031903 Ga0307407_10033741 Ga0307407_100337413 589
186 3300031995 Ga0307409_100001938 Ga0307409_1000019383 589
187 3300031995 Ga0307409_100054422 Ga0307409_1000544223 589
188 3300032002 Ga0307416_100114055 Ga0307416_1001140551 589
189 3300032126 Ga0307415_100010813 Ga0307415_1000108135 589
190 3300032126 Ga0307415_100077287 Ga0307415_1000772872 589
191 3300037466 Ga0395898_0044778 Ga0395898_0044778_361_2280 589
192 3300038443 Ga0395901_0079754 Ga0395901_0079754_14_1933 589
193 3300050507 nmdc:mga05p37_29540_c1 nmdc:mga05p37_29540_c1_1102_2970 589
194 3300050509 nmdc:mga0qj67_8807_c1 nmdc:mga0qj67_8807_c1_5035_6903 589
195 3300053083 Ga0495655_0005022 Ga0495655_0005022_141_2027 589
196 3300061719 Ga0466962_0048981 Ga0466962_0048981_18_1979 589
197 3300005981 Ga0081538_10000124 Ga0081538_1000012469 590
198 3300005981 Ga0081538_10060145 Ga0081538_100601451 590
199 3300006844 Ga0075428_100051285 Ga0075428_1000512852 590
200 3300009094 Ga0111539_10094573 Ga0111539_100945732 590
201 3300032002 Ga0307416_100024556 Ga0307416_1000245563 590
202 3300045976 Ga0466967_0020888 Ga0466967_0020888_3044_5008 590
203 3300031995 Ga0307409_100143062 Ga0307409_1001430621 591
204 3300037312 Ga0395899_0045714 Ga0395899_0045714_53_1951 591
205 3300037418 Ga0395900_0014340 Ga0395900_0014340_398_2296 591
206 3300037466 Ga0395898_0004317 Ga0395898_0004317_11406_13304 591
207 3300037471 Ga0395905_0006750 Ga0395905_0006750_3701_5599 591
208 3300038443 Ga0395901_0019468 Ga0395901_0019468_2178_4076 591
209 3300048914 Ga0496111_0088015 Ga0496111_0088015_138_2036 591
210 3300000549 LJQas_1002235 LJQas_10022352 593

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

20

448

0.85

PF00582

Usp

Universal stress protein family

492

624

0.84

PF13520

AA_permease_2

Amino acid permease

9

465

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z08-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.8186 456 580
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8163 14 432
6li9-assembly1.cif.gz_B heteromeric amino acid transporter b0,+at-rbat complex bound with arginine 0.8105 15 431
7nf6-assembly1.cif.gz_B ovine b0,+at-rbat heterodimer 0.8002 15 428
2z08-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.7948 456 580
ID Description Score Start End Superfamily
af_P9WQM3_13_431_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8529 17 434 1.20.1740.10
af_Q9Y1A7_38_480_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8473 17 428 1.20.1740.10
af_Q50E62_26_473_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8454 17 433 1.20.1740.10
af_Q4DQR3_170_606_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8398 17 434 1.20.1740.10
af_P77400_8_430_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8282 16 435 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A1M5TRL4-F1-model_v4 Ethanolamine:proton symporter, EAT family (TC 2.A.3.5.1) 0.8973 18 434 GO:0005886
GO:0022857
AF-A0A497EMI1-F1-model_v4 APC family permease 0.8812 16 439 GO:0005886
GO:0022857
AF-H8IA08-F1-model_v4 Amino acid transporter 0.8811 16 453 GO:0005886
GO:0022857
AF-A0A0N1KHJ8-F1-model_v4 deleted 0.8807 18 406
AF-A0A2G5L970-F1-model_v4 Ethanolamine permease 0.8684 19 431 GO:0016020
GO:0055085

Feature Viewer

pLDDT pTM Quality
77.82 0.72 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map