F320108

General Info

Members Datasets Scaffolds Average Seq Length
210 170 420 431

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100108395|Ga0070697_1001083952
Length 468
Sequence MSRKLFGTDGVRGIANQEPMTAETALRLAEAAAAYFRRGDHRHRVVIGKDTRLSGYLIEPAMTAGFISMGMDVFLVGPMPTPAVAMLTRAMRCDLGVVISASHNPFEDNGIKLFGPDGYKLSDEIELEIERRMENGLPERAPSPKLGRAQRLDDAPGRYIEFVKRSFPNGLRLDGLKIAIDCANGAAYKVAPTVLFELGAEVVPLGVKPDGLNINKQCGATQPDMLREETVTHGCDLGIALDGDADRVVMADEKGEVIDGDQLMALIASSWQNQKRLKGGGIVTTVMSNLGLERFLAAKGLRMARTAVGDRYVLEHMRAKGFNLGGEQSGHIIISDYAHTGDGLIAALQVLAVLVQGKAKASEATRLFAPVPQLLKSVRYDKTNGAKPLEHDGVKTAIASAEKKLGANAGRLLIRKSGTEPVIRVMAEGDDAKLVKDVVNDLCAVIQQAAEGKEPRSVSGRTRRPAGA

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
50 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
87 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
88 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
89 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
97 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
98 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
99 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
151 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
156 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
157 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 2508501050 Microvirga lupini Lut6 Isolate Nodule
160 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
161 2818991467 Bosea vestrisii 3192 Isolate Unclassified
162 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
163 2841760612 Bosea sp. Tri-49 Isolate Nodule
164 2844104063 Bosea sp. Tri-39 Isolate Nodule
165 2851246043 Bosea sp. Tri-54 Isolate Nodule
166 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
167 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
168 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
169 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
170 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.29
Metatranscriptomes 0
Isolates 5.71

Biome Distribution

Category Percentage (%)
Aerial Root 0.95
Bulb 0
Endosphere 16.19
Nodule 2.86
Rhizoplane 4.76
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100108395 3300005536 Bacteria 2312
2 JGI24751J29686_10001903 3300002459 Bacteria 4267
3 JGI25150J39212_1001603 3300002774 Bacteria 6164
4 JGI25159J45721_1004880 3300002987 Bacteria 4324
5 Ga0055526_1000204 3300003771 Bacteria 51135
6 Ga0055526_1001776 3300003771 Bacteria 14983
7 Ga0055530_10000112 3300003791 Bacteria 70804
8 Ga0055530_10001840 3300003791 Bacteria 14607
9 Ga0055540_1007049 3300003792 Bacteria 4324
10 Ga0055531_10000100 3300003794 Bacteria 93692
11 Ga0065165_1000048 3300005262 Bacteria 196539
12 Ga0065165_1011208 3300005262 Bacteria 3772
13 Ga0065704_10070157 3300005289 Bacteria 211668
14 Ga0065715_10109014 3300005293 Bacteria 2689
15 Ga0065707_10084066 3300005295 Bacteria 7744
16 Ga0070658_10000144 3300005327 Bacteria 63113
17 Ga0070658_10117453 3300005327 Bacteria 2208
18 Ga0070676_10053465 3300005328 Bacteria 2379
19 Ga0070666_10002415 3300005335 Bacteria 11297
20 Ga0068868_100016894 3300005338 Bacteria 5429
21 Ga0070669_100000139 3300005353 Bacteria 64859
22 Ga0070669_100005004 3300005353 Bacteria 9578
23 Ga0070671_100000053 3300005355 Bacteria 78361
24 Ga0070667_100000194 3300005367 Bacteria 72751
25 Ga0070667_100001283 3300005367 Bacteria 22714
26 Ga0070701_10043401 3300005438 Bacteria 2300
27 Ga0070681_10158246 3300005458 Bacteria 2189
28 Ga0070707_100038552 3300005468 Bacteria 4564
29 Ga0070679_100100855 3300005530 Bacteria 2873
30 Ga0068853_100155126 3300005539 Bacteria 2063
31 Ga0070695_100037011 3300005545 Bacteria 3074
32 Ga0070665_100026073 3300005548 Bacteria 5886
33 Ga0068855_100006142 3300005563 Bacteria 14644
34 Ga0068863_100000006 3300005841 Bacteria 265379
35 Ga0068858_100035259 3300005842 Bacteria 4641
36 Ga0068860_100000093 3300005843 Bacteria 150034
37 Ga0068860_100006924 3300005843 Bacteria 11362
38 Ga0068860_100139151 3300005843 Bacteria 2332
39 Ga0075363_100007846 3300006048 Bacteria 4936
40 Ga0075432_10000730 3300006058 Bacteria 10154
41 Ga0075369_10023695 3300006186 Bacteria 2539
42 Ga0075370_10014882 3300006353 Bacteria 4156
43 Ga0075431_100132786 3300006847 Bacteria 2567
44 Ga0075433_10014525 3300006852 Bacteria 6438
45 Ga0075434_100062783 3300006871 Bacteria 3699
46 Ga0075434_100090790 3300006871 Bacteria 3056
47 Ga0105240_10000094 3300009093 Bacteria 181637
48 Ga0105240_10003094 3300009093 Bacteria 26163
49 Ga0105248_10179071 3300009177 Bacteria 2389
50 Ga0105238_10036982 3300009551 Bacteria 4963
51 Ga0099796_10001372 3300010159 Bacteria 4859
52 Ga0105239_10039377 3300010375 Bacteria 5180
53 Ga0105246_10153073 3300011119 Bacteria 1748
54 Ga0157371_10007078 3300013102 Bacteria 9121
55 Ga0157370_10121080 3300013104 Bacteria 2443
56 Ga0157369_10091384 3300013105 Bacteria 3249
57 Ga0171462_1008 3300013250 Bacteria 384318
58 Ga0157372_10019491 3300013307 Bacteria 7314
59 Ga0183363_1007 3300015690 Bacteria 315687
60 Ga0183361_10209 3300016635 Bacteria 2178
61 Ga0209130_1000071 3300025284 Bacteria 178273
62 Ga0209025_1000658 3300025294 Bacteria 59891
63 Ga0209758_1000986 3300025297 Bacteria 38258
64 Ga0209050_1000071 3300025298 Bacteria 295478
65 Ga0209257_1000027 3300025304 Bacteria 703541
66 Ga0209257_1009126 3300025304 Bacteria 5409
67 Ga0207697_10023959 3300025315 Bacteria 2499
68 Ga0207695_10000419 3300025913 Bacteria 94504
69 Ga0207695_10001821 3300025913 Bacteria 33559
70 Ga0207652_10178663 3300025921 Bacteria 1906
71 Ga0207646_10008958 3300025922 Bacteria 9960
72 Ga0207694_10020863 3300025924 Bacteria 4960
73 Ga0207644_10000004 3300025931 Bacteria 566613
74 Ga0207670_10142443 3300025936 Bacteria 1769
75 Ga0207711_10003967 3300025941 Bacteria 12730
76 Ga0207667_10130268 3300025949 Bacteria 2591
77 Ga0207658_10000519 3300025986 Bacteria 35139
78 Ga0207658_10001748 3300025986 Bacteria 16348
79 Ga0207703_10020727 3300026035 Bacteria 5144
80 Ga0207703_10054070 3300026035 Bacteria 3264
81 Ga0207678_10202971 3300026067 Bacteria 1695
82 Ga0207641_10000271 3300026088 Bacteria 65831
83 Ga0207676_10014262 3300026095 Bacteria 5713
84 Ga0207676_10117594 3300026095 Bacteria 2236
85 Ga0207674_10009244 3300026116 Bacteria 11297
86 Ga0207698_10082369 3300026142 Bacteria 2601
87 Ga0209179_1003587 3300027512 Bacteria 2253
88 Ga0207428_10034036 3300027907 Bacteria 4178
89 Ga0268266_10011988 3300028379 Bacteria 7505
90 Ga0268266_10013611 3300028379 Bacteria 7007
91 Ga0268264_10000067 3300028381 Bacteria 284445
92 Ga0268264_10004382 3300028381 Bacteria 12046
93 Ga0268264_10035362 3300028381 Bacteria 4112
94 Ga0265332_10000508 3300031238 Bacteria 26654
95 Ga0265328_10000101 3300031239 Bacteria 42001
96 Ga0265339_10000201 3300031249 Bacteria 49070
97 Ga0265331_10009062 3300031250 Bacteria 5620
98 Ga0265331_10020926 3300031250 Bacteria 3352
99 Ga0265331_10023960 3300031250 Bacteria 3093
100 Ga0307408_100097040 3300031548 Bacteria 2238
101 Ga0265313_10000071 3300031595 Bacteria 99087
102 Ga0265313_10000152 3300031595 Bacteria 71968
103 Ga0265342_10018333 3300031712 Bacteria 4536
104 Ga0265342_10100763 3300031712 Bacteria 1645
105 Ga0307516_10101056 3300031730 Bacteria 2699
106 Ga0307416_100304684 3300032002 Bacteria 1586
107 Ga0307507_10028588 3300033179 Bacteria 5937
108 Ga0373932_0029715 3300035112 Bacteria 1510
109 Ga0373939_0055307 3300035114 Bacteria 1246
110 Ga0373942_0020679 3300035207 Bacteria 1655
111 Ga0373962_0025409 3300035242 Bacteria 1591
112 Ga0373927_0081960 3300035695 Bacteria 2091
113 Ga0316582_0001394 3300036647 Bacteria 10541
114 Ga0316584_0033471 3300036712 Bacteria 3808
115 Ga0373925_0135329 3300037068 Bacteria 1925
116 Ga0237819_00354 3300038705 Bacteria 16352
117 Ga0436361_0407821 3300039447 Bacteria 6097
118 Ga0439436_0027387 3300041404 Bacteria 1667
119 Ga0439448_0005069 3300042005 Bacteria 3743
120 Ga0450920_023713 3300042122 Bacteria 1190
121 Ga0450906_020460 3300042145 Bacteria 1184
122 Ga0495603_0172169 3300046455 Bacteria 1254
123 Ga0495596_0000041 3300046500 Bacteria 93277
124 Ga0495596_0002953 3300046500 Bacteria 8819
125 Ga0495583_0000033 3300046506 Bacteria 246882
126 Ga0495610_0000303 3300046512 Bacteria 51903
127 Ga0495610_0008373 3300046512 Bacteria 6712
128 Ga0495643_0017248 3300046522 Bacteria 4225
129 Ga0495666_0115405 3300046526 Bacteria 1260
130 Ga0495622_0009165 3300046557 Bacteria 4581
131 Ga0495625_0095703 3300046660 Bacteria 2046
132 Ga0495673_0050144 3300047469 Bacteria 1834
133 Ga0495686_0000784 3300047472 Bacteria 41568
134 Ga0495615_0000231 3300048090 Bacteria 11802
135 Ga0495626_0000706 3300048091 Bacteria 31641
136 Ga0496104_0084794 3300048907 Bacteria 3023
137 Ga0496105_0084801 3300048908 Bacteria 2617
138 Ga0496106_0061712 3300048909 Bacteria 2844
139 Ga0496107_0006246 3300048910 Bacteria 8192
140 Ga0496109_0054958 3300048912 Bacteria 3632
141 Ga0496112_0035596 3300048915 Bacteria 4851
142 Ga0496112_0148748 3300048915 Bacteria 2309
143 Ga0496113_0038724 3300048916 Bacteria 3506
144 Ga0496115_0058775 3300048918 Bacteria 3095
145 Ga0496115_0185777 3300048918 Bacteria 1717
146 Ga0496116_0000045 3300048919 Bacteria 324307
147 Ga0496116_0001606 3300048919 Bacteria 24832
148 Ga0496118_0014888 3300048921 Bacteria 7245
149 Ga0496118_0130348 3300048921 Bacteria 1616
150 Ga0496119_0027895 3300048922 Bacteria 3867
151 Ga0496119_0080753 3300048922 Bacteria 1875
152 Ga0496121_0130947 3300048924 Bacteria 1877
153 Ga0496124_0024995 3300048927 Bacteria 5417
154 Ga0496124_0204411 3300048927 Bacteria 1499
155 Ga0496125_0014365 3300048928 Bacteria 7714
156 Ga0496125_0159574 3300048928 Bacteria 1534
157 Ga0496126_0022190 3300048929 Bacteria 6182
158 Ga0496126_0089221 3300048929 Bacteria 2714
159 Ga0501031_0119123 3300049568 Bacteria 1725
160 Ga0501032_0012455 3300049569 Bacteria 6076
161 Ga0501033_0032052 3300049570 Bacteria 3945
162 Ga0501036_0011941 3300049572 Bacteria 7201
163 Ga0501036_0022095 3300049572 Bacteria 5351
164 Ga0501036_0224959 3300049572 Bacteria 1575
165 Ga0501037_0096120 3300049573 Bacteria 2141
166 Ga0501037_0105667 3300049573 Bacteria 2029
167 Ga0501039_0081371 3300049575 Bacteria 2521
168 Ga0501040_0041108 3300049576 Bacteria 3148
169 Ga0501041_0128665 3300049577 Bacteria 1577
170 Ga0501042_0110638 3300049578 Bacteria 1978
171 Ga0501043_0095059 3300049579 Bacteria 2342
172 Ga0501046_0077774 3300049580 Bacteria 2568
173 Ga0501067_0042500 3300049583 Bacteria 2523
174 Ga0501071_0087672 3300049587 Bacteria 2283
175 Ga0501072_0081658 3300049588 Bacteria 2562
176 Ga0501075_0145876 3300049591 Bacteria 1804
177 Ga0501076_0217465 3300049592 Bacteria 1562
178 Ga0501077_0013730 3300049593 Bacteria 5078
179 Ga0501044_0014258 3300049823 Bacteria 8582
180 nmdc:mga03683_10661_c1 3300050489 Bacteria 3302
181 nmdc:mga03683_23225_c1 3300050489 Bacteria 1692
182 nmdc:mga03683_302_c1 3300050489 Bacteria 14592
183 nmdc:mga00v17_81565_c1 3300050491 Bacteria 2020
184 nmdc:mga0k408_132707_c1 3300050493 Bacteria 1479
185 nmdc:mga06r32_100192_c1 3300050510 Bacteria 2842
186 nmdc:mga06r32_79917_c1 3300050510 Bacteria 3181
187 Ga0500635_0003871 3300053080 Bacteria 3803
188 Ga0500643_018474 3300053087 Bacteria 2312
189 Ga0500555_000247 3300053103 Bacteria 23879
190 Ga0500595_021325 3300053119 Bacteria 2314
191 Ga0500603_007533 3300053150 Bacteria 2394
192 Ga0500616_0018421 3300053153 Bacteria 3948
193 Ga0500627_0000027 3300053158 Bacteria 99420
194 Ga0500637_0020407 3300053178 Bacteria 3588
195 Ga0500637_0136590 3300053178 Bacteria 1420
196 Ga0500611_004583 3300053727 Bacteria 1875
197 Ga0501082_0073536 3300060353 Bacteria 2944
198 Ga0501082_0297436 3300060353 Bacteria 1405
199 2508725226 2508501050 Bacteria 9633614
200 2513887721 2513237141 Bacteria 8496279
201 2819719776 2818991467 Bacteria 5893227
202 2830078446 2830075706 Bacteria 3855215
203 2841760613 2841760612 Bacteria 6454112
204 2844106270 2844104063 Bacteria 6440972
205 2851246626 2851246043 Bacteria 6439203
206 2917704317 2917699015 Bacteria 7043791
207 2990265973 2990265787 Bacteria 3943888
208 2993696235 2993693658 Bacteria 4040749
209 3005490192 3005483717 Bacteria 7877331
210 8019641752 8019638758 Bacteria 9062356
211 Ga0070697_100108395
212 JGI24751J29686_10001903
213 JGI25150J39212_1001603
214 JGI25159J45721_1004880
215 Ga0055526_1000204
216 Ga0055526_1001776
217 Ga0055530_10000112
218 Ga0055530_10001840
219 Ga0055540_1007049
220 Ga0055531_10000100
221 Ga0065165_1000048
222 Ga0065165_1011208
223 Ga0065704_10070157
224 Ga0065715_10109014
225 Ga0065707_10084066
226 Ga0070658_10000144
227 Ga0070658_10117453
228 Ga0070676_10053465
229 Ga0070666_10002415
230 Ga0068868_100016894
231 Ga0070669_100000139
232 Ga0070669_100005004
233 Ga0070671_100000053
234 Ga0070667_100000194
235 Ga0070667_100001283
236 Ga0070701_10043401
237 Ga0070681_10158246
238 Ga0070707_100038552
239 Ga0070679_100100855
240 Ga0068853_100155126
241 Ga0070695_100037011
242 Ga0070665_100026073
243 Ga0068855_100006142
244 Ga0068863_100000006
245 Ga0068858_100035259
246 Ga0068860_100000093
247 Ga0068860_100006924
248 Ga0068860_100139151
249 Ga0075363_100007846
250 Ga0075432_10000730
251 Ga0075369_10023695
252 Ga0075370_10014882
253 Ga0075431_100132786
254 Ga0075433_10014525
255 Ga0075434_100062783
256 Ga0075434_100090790
257 Ga0105240_10000094
258 Ga0105240_10003094
259 Ga0105248_10179071
260 Ga0105238_10036982
261 Ga0099796_10001372
262 Ga0105239_10039377
263 Ga0105246_10153073
264 Ga0157371_10007078
265 Ga0157370_10121080
266 Ga0157369_10091384
267 Ga0171462_1008
268 Ga0157372_10019491
269 Ga0183363_1007
270 Ga0183361_10209
271 Ga0209130_1000071
272 Ga0209025_1000658
273 Ga0209758_1000986
274 Ga0209050_1000071
275 Ga0209257_1000027
276 Ga0209257_1009126
277 Ga0207697_10023959
278 Ga0207695_10000419
279 Ga0207695_10001821
280 Ga0207652_10178663
281 Ga0207646_10008958
282 Ga0207694_10020863
283 Ga0207644_10000004
284 Ga0207670_10142443
285 Ga0207711_10003967
286 Ga0207667_10130268
287 Ga0207658_10000519
288 Ga0207658_10001748
289 Ga0207703_10020727
290 Ga0207703_10054070
291 Ga0207678_10202971
292 Ga0207641_10000271
293 Ga0207676_10014262
294 Ga0207676_10117594
295 Ga0207674_10009244
296 Ga0207698_10082369
297 Ga0209179_1003587
298 Ga0207428_10034036
299 Ga0268266_10011988
300 Ga0268266_10013611
301 Ga0268264_10000067
302 Ga0268264_10004382
303 Ga0268264_10035362
304 Ga0265332_10000508
305 Ga0265328_10000101
306 Ga0265339_10000201
307 Ga0265331_10009062
308 Ga0265331_10020926
309 Ga0265331_10023960
310 Ga0307408_100097040
311 Ga0265313_10000071
312 Ga0265313_10000152
313 Ga0265342_10018333
314 Ga0265342_10100763
315 Ga0307516_10101056
316 Ga0307416_100304684
317 Ga0307507_10028588
318 Ga0373932_0029715
319 Ga0373939_0055307
320 Ga0373942_0020679
321 Ga0373962_0025409
322 Ga0373927_0081960
323 Ga0316582_0001394
324 Ga0316584_0033471
325 Ga0373925_0135329
326 Ga0237819_00354
327 Ga0436361_0407821
328 Ga0439436_0027387
329 Ga0439448_0005069
330 Ga0450920_023713
331 Ga0450906_020460
332 Ga0495603_0172169
333 Ga0495596_0000041
334 Ga0495596_0002953
335 Ga0495583_0000033
336 Ga0495610_0000303
337 Ga0495610_0008373
338 Ga0495643_0017248
339 Ga0495666_0115405
340 Ga0495622_0009165
341 Ga0495625_0095703
342 Ga0495673_0050144
343 Ga0495686_0000784
344 Ga0495615_0000231
345 Ga0495626_0000706
346 Ga0496104_0084794
347 Ga0496105_0084801
348 Ga0496106_0061712
349 Ga0496107_0006246
350 Ga0496109_0054958
351 Ga0496112_0035596
352 Ga0496112_0148748
353 Ga0496113_0038724
354 Ga0496115_0058775
355 Ga0496115_0185777
356 Ga0496116_0000045
357 Ga0496116_0001606
358 Ga0496118_0014888
359 Ga0496118_0130348
360 Ga0496119_0027895
361 Ga0496119_0080753
362 Ga0496121_0130947
363 Ga0496124_0024995
364 Ga0496124_0204411
365 Ga0496125_0014365
366 Ga0496125_0159574
367 Ga0496126_0022190
368 Ga0496126_0089221
369 Ga0501031_0119123
370 Ga0501032_0012455
371 Ga0501033_0032052
372 Ga0501036_0011941
373 Ga0501036_0022095
374 Ga0501036_0224959
375 Ga0501037_0096120
376 Ga0501037_0105667
377 Ga0501039_0081371
378 Ga0501040_0041108
379 Ga0501041_0128665
380 Ga0501042_0110638
381 Ga0501043_0095059
382 Ga0501046_0077774
383 Ga0501067_0042500
384 Ga0501071_0087672
385 Ga0501072_0081658
386 Ga0501075_0145876
387 Ga0501076_0217465
388 Ga0501077_0013730
389 Ga0501044_0014258
390 nmdc:mga03683_10661_c1
391 nmdc:mga03683_23225_c1
392 nmdc:mga03683_302_c1
393 nmdc:mga00v17_81565_c1
394 nmdc:mga0k408_132707_c1
395 nmdc:mga06r32_100192_c1
396 nmdc:mga06r32_79917_c1
397 Ga0500635_0003871
398 Ga0500643_018474
399 Ga0500555_000247
400 Ga0500595_021325
401 Ga0500603_007533
402 Ga0500616_0018421
403 Ga0500627_0000027
404 Ga0500637_0020407
405 Ga0500637_0136590
406 Ga0500611_004583
407 Ga0501082_0073536
408 Ga0501082_0297436
409 2508725226
410 2513887721
411 2819719776
412 2830078446
413 2841760613
414 2844106270
415 2851246626
416 2917704317
417 2990265973
418 2993696235
419 3005490192
420 8019641752

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02878

PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

3

140

0.98

PF02880

PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

259

371

0.95

PF02879

PGM_PMM_II

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

157

255

0.92

PF00408

PGM_PMM_IV

Phosphoglucomutase/phosphomannomutase, C-terminal domain

374

445

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gyz-assembly1.cif.gz_B crystal structure of glmm from staphylococcus aureus 0.9509 5 427
7olh-assembly3.cif.gz_E bacillus subtilis complex structure 1 of diadenylate cyclase cdaa cytoplasmic domain (cdaacd) and the phosphoglucomutase glmm short variant (glmmf369) 0.9493 5 353
6gyz-assembly1.cif.gz_B crystal structure of glmm from staphylococcus aureus 0.9337 5 427
3i3w-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9096 5 428
7ojr-assembly1.cif.gz_A bacillus subtilis phosphoglucomutase glmm (phosphate bound) 0.9021 2 427
ID Description Score Start End Superfamily
6gyzB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9868 156 347 3.40.120.10
af_P9WN41_373_447_3.30.310.50 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.9757 355 427 3.30.310.50
af_P31120_370_445_3.30.310.50 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.9706 355 427 3.30.310.50
3i3wB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9402 156 346 3.40.120.10
af_P31120_3_154_3.40.120.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9384 2 153 3.40.120.10
ID Description Score Start End GO Terms
AF-A0A436DZ99-F1-model_v4 Phosphoglucosamine mutase (EC 5.4.2.10) 0.9821 103 275 GO:0004615
GO:0005829
GO:0005975
GO:0006048
GO:0008966
GO:0009252
AF-A0A382VFH7-F1-model_v4 Alpha-D-phosphohexomutase alpha/beta/alpha domain-containing protein 0.9815 99 260 GO:0004615
GO:0005829
GO:0005975
GO:0006048
GO:0008966
GO:0009252
AF-A0A0F3LHP3-F1-model_v4 Phosphoglucosamine mutase (EC 5.4.2.10) 0.9781 20 427 GO:0000287
GO:0004615
GO:0005829
GO:0005975
GO:0006048
GO:0008966
GO:0009252
AF-A0A3D2E4I2-F1-model_v4 deleted 0.9723 202 428
AF-A0A2N3D1H0-F1-model_v4 Phosphoglucosamine mutase (EC 5.4.2.10) 0.9706 1 425 GO:0000287
GO:0004615
GO:0005829
GO:0005975
GO:0006048
GO:0008966
GO:0009252

Map